File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/a6cb9ff6322ee735c503d4c30ca645/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 03 21:09:28
                             Started mapping on |	Jun 03 21:16:17
                                    Finished on |	Jun 03 22:24:18
       Mapping speed, Million of reads per hour |	261.39

                          Number of input reads |	296318651
                      Average input read length |	267
                                    UNIQUE READS:
                   Uniquely mapped reads number |	284489840
                        Uniquely mapped reads % |	96.01%
                          Average mapped length |	266.99
                       Number of splices: Total |	347252668
            Number of splices: Annotated (sjdb) |	343099316
                       Number of splices: GT/AG |	343555378
                       Number of splices: GC/AG |	2554864
                       Number of splices: AT/AC |	334413
               Number of splices: Non-canonical |	808013
                      Mismatch rate per base, % |	0.17%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.71
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.82
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	9113728
             % of reads mapped to multiple loci |	3.08%
        Number of reads mapped to too many loci |	239782
             % of reads mapped to too many loci |	0.08%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2082115
                 % of reads unmapped: too short |	0.70%
                Number of reads unmapped: other |	393186
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%