Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/2ae5b378c12aadd2e2caa877425391/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/da9dd178c5c216644dfa0d72c2ff44/aih-tih-sc-3377ac-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/2ae5b378c12aadd2e2caa877425391/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory