File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/99823ce334c2ccf235ee8fb3c38e04/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 03 21:23:35
                             Started mapping on |	Jun 03 21:30:31
                                    Finished on |	Jun 03 22:41:02
       Mapping speed, Million of reads per hour |	252.44

                          Number of input reads |	296687971
                      Average input read length |	266
                                    UNIQUE READS:
                   Uniquely mapped reads number |	283574726
                        Uniquely mapped reads % |	95.58%
                          Average mapped length |	266.00
                       Number of splices: Total |	328326020
            Number of splices: Annotated (sjdb) |	323892983
                       Number of splices: GT/AG |	324632442
                       Number of splices: GC/AG |	2408129
                       Number of splices: AT/AC |	284793
               Number of splices: Non-canonical |	1000656
                      Mismatch rate per base, % |	0.20%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.92
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.84
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	10403013
             % of reads mapped to multiple loci |	3.51%
        Number of reads mapped to too many loci |	317598
             % of reads mapped to too many loci |	0.11%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2048696
                 % of reads unmapped: too short |	0.69%
                Number of reads unmapped: other |	343938
                     % of reads unmapped: other |	0.12%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%