File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/04bb2aa4cd419e1a24ed0b51b3ee1a/.command.log
Size
1.1 KB
Task
NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (NTC_0001_0001_A23YTGFLT4_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/e69829c51da7f9b212b2b34091a3df/NTC_0001_0001_A23YTGFLT4_1.arriba.fusions.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/04bb2aa4cd419e1a24ed0b51b3ee1a/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/04bb2aa4cd419e1a24ed0b51b3ee1a/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/blacklist_breakpoint_database_2026-04-27.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-e543dae6-5fea-4720-bfb6-150bf1ff20d4/33/a04540cea7c8abc13163bc03b147d5/arriba_filter_config.yaml
==> STAGING COMPLETE (5 inputs)


================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 0
Arriba filter: 0 rows -> 0 PASS; wrote NTC_0001_0001_A23YTGFLT4_1.arriba.fusions.filtered.tsv and NTC_0001_0001_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: NTC_0001_0001_A23YTGFLT4_1.arriba.fusions.filter_summary.txt