File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/7ad4fb90daad4989181b444c6932d8/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/b0e3294cb9ef770cc89c8c44d4da10/aih-tih-sc-1274d4-R1_A23YTGFLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/7ad4fb90daad4989181b444c6932d8/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/7ad4fb90daad4989181b444c6932d8/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/51/705914b50e85f419a7f820e35597a0/aih-tih-sc-1274d4-R1_A23YTGFLT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-1274d4-R1_A23YTGFLT4_1/abundance.h5
Successfully converted aih-tih-sc-1274d4-R1_A23YTGFLT4_1/abundance.h5 to aih-tih-sc-1274d4-R1_A23YTGFLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-1274d4-R1_A23YTGFLT4_1
  Mean Fragment Length: 125.9 bp
  Median Fragment Length: 115.0 bp
  pct_mito_est_counts: 0.018%
  pct_ribo_est_counts: 0.898%
  pct_hk_est_counts: 0.422%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.04%
  pct_ribo_tpm: 2.775%
  pct_hk_tpm: 0.648%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.021%