Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/efb9015b09f65376959cbf20cbac06/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/efb9015b09f65376959cbf20cbac06/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/c692a4b4a8d6f9a7ae2caefb19ea33/FFPE_V4_0002_RNA_0002_A23YTGFLT4_1_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/c692a4b4a8d6f9a7ae2caefb19ea33/FFPE_V4_0002_RNA_0002_A23YTGFLT4_1_R1.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory