AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 667
Pass (FILTER=PASS): 99 (14.8%)
Fail (FILTER=FAIL): 568 (85.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 173
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 101
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 32
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 32
confidence_below_min(low<high): 32
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 28
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 28
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 26
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 23
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 7
Breakdown by confidence:
high: 99 pass, 11 fail (total: 110)
low: 0 pass, 262 fail (total: 262)
medium: 0 pass, 295 fail (total: 295)
Arriba filter: 667 rows -> 99 PASS; wrote aih-tih-sc-b6fd19-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-b6fd19-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-b6fd19-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt