File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/e285e991af75a0c62dded1f08737f1/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/3519bf6cea6050a2fe3167cc9b6558/aih-tih-sc-0754d2-R1_A23YTGFLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/e285e991af75a0c62dded1f08737f1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/e285e991af75a0c62dded1f08737f1/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/a3567d10acd9cb29352d485d204d24/aih-tih-sc-0754d2-R1_A23YTGFLT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-0754d2-R1_A23YTGFLT4_1/abundance.h5
Successfully converted aih-tih-sc-0754d2-R1_A23YTGFLT4_1/abundance.h5 to aih-tih-sc-0754d2-R1_A23YTGFLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-0754d2-R1_A23YTGFLT4_1
  Mean Fragment Length: 113.8 bp
  Median Fragment Length: 106.0 bp
  pct_mito_est_counts: 0.13%
  pct_ribo_est_counts: 0.686%
  pct_hk_est_counts: 0.523%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.216%
  pct_ribo_tpm: 1.801%
  pct_hk_tpm: 0.871%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.052%