Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/fa30cda2ee6ad5883585bbc3ab3b30/aih-tih-sc-69be7e-R1_A23YTGFLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-e543dae6-5fea-4720-bfb6-150bf1ff20d4/82/1bfcba5045fc10a52ca200a4890a9a/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d4/f9ba552338ab574bbc5e0aad33f521/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d4/f9ba552338ab574bbc5e0aad33f521/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/03a7be65a0b8047c302aa7d9ad9abb/aih-tih-sc-69be7e-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)

Running application...
SLBP--LETM1
starfusion
arriba
HNRNPR--TCEA3
starfusion
arriba
ANO6--ARID2
starfusion
VOPP1--TNS3
starfusion
arriba
MAP4K3--CRHR2
starfusion
arriba
TLK2--FAM157A
starfusion
arriba
DHRS2--GSTM2
starfusion
WWTR1--AC079841.2
starfusion
ARID1B--AFDN
starfusion
BRPF1--ATG7
starfusion
arriba
SPPL2B--PSPN
starfusion
FBXO25--AC240565.1
starfusion
STX16--NPEPL1
arriba
AC005993.1--RGS6
arriba
TVP23C--CDRT4
arriba
AP000347.1--IGLL1
arriba
CCDC169--SOHLH2
arriba
SLBP--NSD2
arriba

  0%|          | 0/18 [00:00<?, ?it/s]
Processing SLBP--LETM1:   0%|          | 0/18 [00:00<?, ?it/s]
Processing SLBP--LETM1:   6%|▌         | 1/18 [00:00<00:01,  8.76it/s]
Processing HNRNPR--TCEA3:   6%|▌         | 1/18 [00:00<00:01,  8.76it/s]
Processing HNRNPR--TCEA3:  11%|█         | 2/18 [00:00<00:01,  9.11it/s]
Processing ANO6--ARID2:  11%|█         | 2/18 [00:00<00:01,  9.11it/s]  
Processing ANO6--ARID2:  17%|█▋        | 3/18 [00:00<00:01,  9.23it/s]
Processing VOPP1--TNS3:  17%|█▋        | 3/18 [00:00<00:01,  9.23it/s]
Processing VOPP1--TNS3:  22%|██▏       | 4/18 [00:00<00:01,  9.30it/s]
Processing MAP4K3--CRHR2:  22%|██▏       | 4/18 [00:00<00:01,  9.30it/s]
Processing MAP4K3--CRHR2:  28%|██▊       | 5/18 [00:00<00:01,  9.35it/s]
Processing TLK2--FAM157A:  28%|██▊       | 5/18 [00:00<00:01,  9.35it/s]
Processing TLK2--FAM157A:  33%|███▎      | 6/18 [00:00<00:01,  9.39it/s]
Processing DHRS2--GSTM2:  33%|███▎      | 6/18 [00:00<00:01,  9.39it/s] 
Processing DHRS2--GSTM2:  39%|███▉      | 7/18 [00:00<00:01,  9.41it/s]
Processing WWTR1--AC079841.2:  39%|███▉      | 7/18 [00:00<00:01,  9.41it/s]
Processing WWTR1--AC079841.2:  44%|████▍     | 8/18 [00:00<00:01,  9.42it/s]
Processing ARID1B--AFDN:  44%|████▍     | 8/18 [00:00<00:01,  9.42it/s]     
Processing ARID1B--AFDN:  50%|█████     | 9/18 [00:00<00:00,  9.43it/s]
Processing BRPF1--ATG7:  50%|█████     | 9/18 [00:00<00:00,  9.43it/s] 
Processing BRPF1--ATG7:  56%|█████▌    | 10/18 [00:01<00:00,  9.44it/s]
Processing SPPL2B--PSPN:  56%|█████▌    | 10/18 [00:01<00:00,  9.44it/s]
Processing SPPL2B--PSPN:  61%|██████    | 11/18 [00:01<00:00,  9.44it/s]
Processing FBXO25--AC240565.1:  61%|██████    | 11/18 [00:01<00:00,  9.44it/s]
Processing FBXO25--AC240565.1:  67%|██████▋   | 12/18 [00:01<00:00,  9.43it/s]
Processing STX16--NPEPL1:  67%|██████▋   | 12/18 [00:01<00:00,  9.43it/s]     
Processing STX16--NPEPL1:  72%|███████▏  | 13/18 [00:01<00:00,  9.43it/s]
Processing AC005993.1--RGS6:  72%|███████▏  | 13/18 [00:01<00:00,  9.43it/s]
Processing AC005993.1--RGS6:  78%|███████▊  | 14/18 [00:01<00:00,  9.44it/s]
Processing TVP23C--CDRT4:  78%|███████▊  | 14/18 [00:01<00:00,  9.44it/s]   
Processing TVP23C--CDRT4:  83%|████████▎ | 15/18 [00:01<00:00,  9.44it/s]
Processing AP000347.1--IGLL1:  83%|████████▎ | 15/18 [00:01<00:00,  9.44it/s]
Processing AP000347.1--IGLL1:  89%|████████▉ | 16/18 [00:01<00:00,  9.45it/s]
Processing CCDC169--SOHLH2:  89%|████████▉ | 16/18 [00:01<00:00,  9.45it/s]  
Processing CCDC169--SOHLH2:  94%|█████████▍| 17/18 [00:01<00:00,  9.45it/s]
Processing SLBP--NSD2:  94%|█████████▍| 17/18 [00:01<00:00,  9.45it/s]     
Processing SLBP--NSD2: 100%|██████████| 18/18 [00:01<00:00,  9.44it/s]
Processing SLBP--NSD2: 100%|██████████| 18/18 [00:01<00:00,  9.39it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory