File Info

Filename
tih_rna_sample_00071_23KKJ7LT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__2cae617--20260513-145008/starfusion/tih_rna_sample_00071_23KKJ7LT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
Size
1.2 KB
Workflow Run
dev_rna_exp06_07-2cae617
Published
May 16, 2026 6:51 AM

Content

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STAR-FUSION FILTERING SUMMARY
================================================================================

Input file: tih_rna_sample_00071_23KKJ7LT4_1.starfusion.starfusion.fusion_predictions.tsv
Blacklist: blacklist_hg38_GRCh38_v2.4.0.tsv.gz
Filter config: starfusion_filter_config.yaml
Output file: tih_rna_sample_00071_23KKJ7LT4_1.starfusion.starfusion.fusion_predictions.filter_summary.tsv

Total fusions: 1611
Pass (CALL=1): 2 (0.1%)
Fail (CALL=0): 1609 (99.9%)

Blacklist Flagging:
  Total blacklisted: 195
  All blacklisted fusions have CALL=0

Failure Reasons:
  Read count too low: 1 < 8: 762
  Excluded SpliceType: INCL_NON_REF_SPLICE: 572
  Blacklisted: 97
  Blacklisted; aih_curated_blacklist score(3): 64
  Read count too low: 2 < 8: 41
  aih_curated_blacklist score(3): 32
  Excluded annotation pattern: HGNC_GENEFAM: 29
  Excluded annotation pattern: GTEx_recurrent_StarF2019: 3
  Does not meet inclusion criteria: 2
  aih_curated_blacklist score(5): 2
  Excluded annotation pattern: DGD_PARALOGS: 2
  Read count too low: 7 < 8: 1
  Read count too low: 5 < 8: 1
  Read count too low: 3 < 8: 1

Breakdown by SpliceType:
  INCL_NON_REF_SPLICE: 0 pass, 910 fail (total: 910)
  ONLY_REF_SPLICE: 2 pass, 699 fail (total: 701)