tih_rna_sample_00071_23KKJ7LT4_1.starfusion.starfusion.fusion_predictions.filtered.tsv

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Filename: tih_rna_sample_00071_23KKJ7LT4_1.starfusion.starfusion.fusion_predictions.filtered.tsv
Full Path: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__2cae617--20260513-145008/starfusion/tih_rna_sample_00071_23KKJ7LT4_1.starfusion.starfusion.fusion_predictions.filtered.tsv
Size: 663.0 KB
Workflow Run: dev_rna_exp06_07-2cae617
Published: May 16, 2026 6:51 AM

Content

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#FusionName

JunctionReadCount

SpanningFragCount

est_J

est_S

SpliceType

LeftGene

LeftBreakpoint

RightGene

RightBreakpoint

JunctionReads

SpanningFrags

LargeAnchorSupport

FFPM

LeftBreakDinuc

LeftBreakEntropy

RightBreakDinuc

RightBreakEntropy

annots

breakpoint_ID

blacklisted

blacklist_reasons

aih_curated_reason

CALL

filter_reason

FILTER

total_reads

AKT1--INF2

136

136.0

0.0

ONLY_REF_SPLICE

AKT1^ENSG00000142208.17

chr14:104792598:-

INF2^ENSG00000203485.14

chr14:104718795:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1105:9988:3144,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1106:46175:17366,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1108:30496:29613,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1112:42202:1434,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1113:49346:20505,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1121:44904:26040,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1122:44193:25844,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1125:42332:13905,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1137:2917:22229,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1138:37850:28983,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1138:38570:1308,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1139:22285:26404,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1140:6493:18445,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1143:23037:13695,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1144:45204:4559,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1145:32478:3452,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1146:19364:11509,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1151:34582:19931,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1152:36005:3508,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1158:35933:4615,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1160:35156:10388,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1163:33853:26404,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1182:40973:24667,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1185:39452:3480,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1191:38570:17955,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1192:30496:3466,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1195:33692:10682,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1206:33926:11846,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1207:17835:26040,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1220:28911:27315,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1224:28190:2527,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1226:46312:29599,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1235:12779:20113,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1241:37065:2317,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1244:33133:15208,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1254:16784:7544,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1255:26395:19987,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1256:28037:16638,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1257:19073:27567,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1268:44411:28520,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1280:4584:9646,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1282:13709:24134,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1302:15554:14718,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1303:30698:9954,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1306:37551:5540,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1313:10967:19048,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1313:41215:11916,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1316:7229:5204,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1318:50721:22299,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1327:43853:4965,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1328:22414:24947,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1353:9058:10332,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1373:48440:11846,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1383:8289:23125,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1389:45058:12182,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1396:10854:11986,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1401:46005:15811,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1406:5134:16147,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1435:36645:23308,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1436:4924:26376,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1441:22972:28436,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1444:23361:5288,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1451:43683:10276,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1455:47469:9267,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1476:1995:18641,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1477:50050:29319,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1488:14324:28814,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1496:15886:29641,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2102:7828:10192,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2103:11104:15867,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2111:43934:14045,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2132:47420:8146,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2137:45285:19272,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2148:3176:4713,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2150:12172:24106,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2153:36620:1210,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2164:15489:12280,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2165:39290:3508,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2184:34743:13597,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2190:49589:19636,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2218:38570:16105,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2226:47841:5820,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2248:6841:3410,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2279:44079:28282,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2292:30488:25760,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2301:48844:29053,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2311:19874:21276,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2311:42647:9660,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2318:47485:21738,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2323:10894:10963,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2347:16662:2009,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2358:26750:3172,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2361:29088:3298,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2366:47882:6647,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2381:33449:9646,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2413:23336:18193,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2473:39039:3943,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2478:43772:23742,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1103:47380:12560,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1154:29752:26642,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1157:29412:7221,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1206:48723:20491,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1244:51619:26432,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1277:21678:7670,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1326:14276:23658,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1330:7043:3536,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1335:42785:15138,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1348:4163:19202,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1388:27082:28156,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1395:51223:27203,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1450:28660:27665,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1452:37745:2317,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1465:45463:13779,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2106:32227:15517,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2141:3095:28814,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2155:41418:20029,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2164:46684:13765,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2222:23838:28618,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2222:27859:23195,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2240:41766:1182,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2276:13515:21108,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2289:48610:8384,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2293:5231:21752,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2348:46336:25465,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1120:42955:9015,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1228:10304:27932,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1282:49936:21668,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1287:45430:19244,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1394:36685:27862,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1413:14971:26937,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1474:33044:5778,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2111:1955:7053,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2121:11962:4965,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2142:28902:6283,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2270:12714:4671,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2395:49831:13079

YES_LDAS

0.4653

1.8256

1.6895

"[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""LOCAL_INVERSION:-:+:[46814]""]"

chr14:104792598-chr14:104718795

False

PASS

136

C6orf132--KIF6

125

125.0

0.0

ONLY_REF_SPLICE

C6orf132^ENSG00000188112.9

chr6:42142300:-

KIF6^ENSG00000164627.18

chr6:39544693:-

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YES_LDAS

0.4276

1.6402

1.7968

"[""INTRACHROMOSOMAL[chr6:2.38Mb]""]"

chr6:42142300-chr6:39544693

False

PASS

125

HLA-C--MUC16

86.0

0.0

INCL_NON_REF_SPLICE

HLA-C^ENSG00000204525.17

chr6:31269489:-

MUC16^ENSG00000181143.15

chr19:8848985:-

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NO_LDAS

0.2942

1.9656

1.8062

"[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr6--chr19]""]"

chr6:31269489-chr19:8848985

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

HLA-A--C12orf40

76.0

0.0

INCL_NON_REF_SPLICE

HLA-A^ENSG00000206503.13

chr6:29942951:+

C12orf40^ENSG00000180116.15

chr12:39716794:+

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_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1470:43828:10697,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2141:28506:21318,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2144:6210:9660,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2171:20424:13989,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2264:39889:26516,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2293:13426:5680,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2323:17123:12336,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2366:39703:23280,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2397:24145:8917

NO_LDAS

0.26

1.5656

1.7056

"[""INTERCHROMOSOMAL[chr6--chr12]""]"

chr6:29942951-chr12:39716794

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

HLA-C--NUMA1

54.0

0.0

INCL_NON_REF_SPLICE

HLA-C^ENSG00000204525.17

chr6:31269493:-

NUMA1^ENSG00000137497.18

chr11:72013673:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1112:37680:10080,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1165:2480:3704,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1217:20319:5092,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1219:18717:9127,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1240:49467:11467,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1262:37292:19076,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1269:41774:26783,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1303:7092:26937,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1313:41143:16750,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1328:2861:19132,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1334:27940:18123,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1347:10376:29459,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1354:1777:8230,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1369:3387:28058,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1376:29436:27077,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1414:44524:5820,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1444:26087:10542,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1462:43561:16652,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1486:33368:26488,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2120:3273:25227,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2134:44362:23111,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2168:37122:25984,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2205:1752:23013,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2296:47145:25157,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2379:1963:4685,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2395:20877:17661,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2420:43699:12882,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2437:39945:1645,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2460:15586:15671,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2475:27495:13541,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2486:21848:2948,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1149:36353:8455,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1150:8046:20883,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1220:51490:23238,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1277:49305:1434,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1286:46215:2808,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1404:27940:6745,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1427:48246:15657,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2155:46021:28310,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2215:40730:23378,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2259:36669:11860,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2307:25561:7754,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1139:1510:4125,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1141:14470:9001,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1149:38675:19482,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1154:31726:18992,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1313:14672:3550,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1321:32624:28198,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1396:36798:6395,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1404:21549:3018,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1455:36661:8202,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2116:18272:16231,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2223:24542:12798,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2311:11299:29711

NO_LDAS

0.1847

1.8256

1.7819

"[""INTERCHROMOSOMAL[chr6--chr11]""]"

chr6:31269493-chr11:72013673

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

KANSL1--ARL17B

46.0

1.0

ONLY_REF_SPLICE

KANSL1^ENSG00000120071.15

chr17:46094560:-

ARL17B^ENSG00000228696.10

chr17:46352930:-

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&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2183:6089:7151

YES_LDAS

0.1608

1.8892

1.7056

"[""GTEx_recurrent_StarF2019"",""Babiceanu_Normal"",""ChimerSeq"",""INTRACHROMOSOMAL[chr17:0.05Mb]"",""LOCAL_REARRANGEMENT:-:[49395]""]"

chr17:46094560-chr17:46352930

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

IGH-@-ext--TFCP2L1

40.74

0.0

INCL_NON_REF_SPLICE

IGH-@-ext^IGH-.g@-ext

chr14:105588395:+

TFCP2L1^ENSG00000115112.8

chr2:121281148:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1132:29372:7824,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1163:6016:3550,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1188:33692:16147,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1219:17318:22145,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1229:41264:19482,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1277:2934:23742,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1292:38392:3494,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1314:44621:7530,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1363:34679:24807,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1370:33603:5036,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1376:29695:27077,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1378:39347:1196,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1379:24323:9786,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1453:30763:8272,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1475:43473:24204,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1486:31734:25956,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2120:30399:15629,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2148:5992:21584,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2152:15950:26138,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2202:17552:13695,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2207:50017:18950,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2293:17140:13765,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2310:52064:18599,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2377:7496:17072,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2428:17196:15265,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2439:24016:27637,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2465:33085:10921,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2490:14551:26881,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1165:5263:20127,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1201:44290:21808,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1416:32260:24989,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1419:20125:5764,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1462:50681:13793,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1470:37486:5204,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2253:7893:21654,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1185:32891:12126,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1201:33085:23139,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1209:42372:16666,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1266:19801:22215,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1403:12884:7292,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2154:31321:25213

NO_LDAS

0.1394

1.6729

1.9086

"[""INTERCHROMOSOMAL[chr14--chr2]""]"

chr14:105588395-chr2:121281148

True

pair|recurrent

breakpoints

Blacklisted

FAIL

COX20--OR2T33

18.5

0.0

INCL_NON_REF_SPLICE

COX20^ENSG00000203667.10

chr1:244835756:+

OR2T33^ENSG00000177212.4

chr1:248273774:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1103:18847:4587,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1119:50042:5792,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1140:40495:18684,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1160:27430:11719,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1170:15206:23223,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1172:17528:7964,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1228:5191:16049,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1239:47615:26474,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1250:20699:7263,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1313:45390:21808,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1339:45341:9337,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1344:24404:3788,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1351:48326:24485,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1361:24599:29151,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1374:23207:14858,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1431:40673:8623,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1437:16395:28226,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1495:4454:26937,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2107:24922:5302,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2115:12342:9744,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2144:8281:14256,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2196:37607:17072,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2260:41312:24527,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2284:37591:26292,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2332:51870:12882,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2391:48699:1925,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2446:6436:29473,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2449:47073:25956,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2458:8200:24569,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1249:31281:13793,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1329:47987:2457,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1354:38821:12308,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1430:49136:26474,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1247:48602:17955,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1331:39743:15054,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1388:7076:14017,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1477:48035:4139

YES_LDAS

0.0633

1.5058

1.8256

"[""INTRACHROMOSOMAL[chr1:3.42Mb]""]"

chr1:244835756-chr1:248273774

False

Does

not

meet

inclusion

criteria

FAIL

RBM14--RBM4

32.0

0.0

ONLY_REF_SPLICE

RBM14^ENSG00000239306.5

chr11:66617057:+

RBM4^ENSG00000173933.21

chr11:66639700:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1102:21241:1364,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1116:16169:20127,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1155:43197:21486,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1206:15408:2247,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1236:28457:17983,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1269:12544:5862,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1281:24000:2920,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1316:16282:1827,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1371:16217:10206,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1381:8961:6577,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1390:19979:6829,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1404:22455:6829,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1405:50001:16456,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1448:18029:25367,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1451:46344:16624,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2127:13103:6773,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2190:13612:16988,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2202:47655:17633,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2256:51020:20855,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2287:15967:22074,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2436:11606:6787,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1192:37041:23350,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1310:4770:6745,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1368:46158:24905,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1353:19801:19889,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1370:10603:14073,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1431:45835:29697,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2226:17949:24807,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2327:11040:27525,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2327:12399:15979,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2337:2723:10654,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2460:16929:21304

YES_LDAS

0.1095

1.7465

1.9086

"[""HGNC_GENEFAM"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[8733]""]"

chr11:66617057-chr11:66639700

True

pair|recurrent

breakpoints

Blacklisted

FAIL

OR51S1--TP53I11

32.0

0.0

INCL_NON_REF_SPLICE

OR51S1^ENSG00000176922.4

chr11:4848669:-

TP53I11^ENSG00000175274.19

chr11:44933050:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1346:19316:26054,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1375:29760:9365,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1441:36386:25185,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2114:43432:27834,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2159:33004:25213,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2232:40285:24961,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2348:10732:8300,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2369:1380:4293,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2398:23822:9253,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2423:46353:10472,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1175:21047:14228,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1185:50381:4531,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1261:23919:20743,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1348:8046:5078,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1456:29347:19160,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1467:16864:18613,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2124:51910:4349,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2153:36928:9029,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2277:29056:22747,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2290:15983:7306,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2331:20602:25087,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1108:34468:9898,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1229:47736:16848,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1246:16824:6773,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1332:32341:12714,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1366:11420:23616,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1480:23701:23868,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1486:41321:4615,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2233:33506:22383,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2240:48464:20715,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2303:45883:27343,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2469:17487:27259

YES_LDAS

0.1095

1.8295

1.4256

"[""INTRACHROMOSOMAL[chr11:40.04Mb]""]"

chr11:4848669-chr11:44933050

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

SAA4--SAA1

30.0

0.0

ONLY_REF_SPLICE

SAA4^ENSG00000148965.10

chr11:18232395:-

SAA1^ENSG00000173432.12

chr11:18269717:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1110:15513:9884,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1201:26435:22831,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1201:33546:14830,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1229:49928:28884,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1241:42712:10837,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1259:7148:3690,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1277:42939:9491,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1280:15530:22775,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1296:26411:5638,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1331:28943:7474,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1361:23709:28198,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1417:13790:17577,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1433:18086:7249,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2145:20012:5820,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2184:5992:8693,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2334:48949:20939,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2338:12617:2373,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2367:45908:11271,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2494:24728:19230,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1252:33271:29011,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1485:45026:12014,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2211:2974:10332,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2293:16533:28688,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1107:2472:7810,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1153:50576:25213,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1254:43303:23574,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1256:34913:21234,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1479:42744:10921,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2243:12375:6689,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2356:30197:17352

YES_LDAS

0.1026

1.9329

1.7819

"[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr11:0.03Mb]"",""LOCAL_INVERSION:-:+:[29458]""]"

chr11:18232395-chr11:18269717

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

RN7SL732P--RN7SL128P

21.95

0.0

INCL_NON_REF_SPLICE

RN7SL732P^ENSG00000264618.2

chrX:39786593:-

RN7SL128P^ENSG00000240869.3

chr6:20421837:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1109:5846:23209,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1207:5797:8581,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1213:6712:21598,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1288:42057:9618,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1370:36952:29585,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1372:9786:18627,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1457:19866:23476,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2146:32227:7894,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2172:26006:11103,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2225:33109:10907,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2227:49742:4657,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2368:24704:8763,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1115:29768:26082,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1147:41879:18754,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1229:34307:20715,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1308:1825:23532,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1336:5037:26628,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1358:49532:13177,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1375:51045:16778,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1477:22374:19945,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2276:18604:23952,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2349:17520:1841,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1271:22883:1575,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1280:24008:22803,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1316:51846:21052,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1401:29954:19202,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2151:7933:12280,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2327:10554:28058,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2376:15667:13261

YES_LDAS

0.0751

1.8892

1.7465

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chrX--chr6]""]"

chrX:39786593-chr6:20421837

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

COL1A1--SLC45A4

29.0

0.0

INCL_NON_REF_SPLICE

COL1A1^ENSG00000108821.14

chr17:50189867:-

SLC45A4^ENSG00000022567.10

chr8:141254178:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1130:20602:29375,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1168:48658:25872,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1183:7035:6801,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1184:17204:28366,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1206:18709:19398,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1210:29129:26040,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1255:28587:25886,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1261:3403:14410,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1317:9292:19903,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1354:15044:17030,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1368:18790:22285,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1375:34493:21766,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1448:10304:10865,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1462:22811:9435,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1469:39913:6072,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2149:51579:2597,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2167:28142:28338,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2249:40876:29235,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2330:21799:20099,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2336:36709:8875,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2354:8394:22187,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2355:18588:7334,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2394:30893:22705,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1124:20262:12700,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1251:29930:2233,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1419:41523:11355,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1475:48585:11005,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2131:34177:6311,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2190:1542:20463

YES_LDAS

0.0992

1.7056

1.7819

"[""INTERCHROMOSOMAL[chr17--chr8]""]"

chr17:50189867-chr8:141254178

False

Does

not

meet

inclusion

criteria

FAIL

SAMD5--AL033504.1

20.0

0.0

ONLY_REF_SPLICE

SAMD5^ENSG00000203727.4

chr6:147509387:+

AL033504.1^ENSG00000227681.5

chr6:147947472:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1106:37130:28997,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1126:39978:18824,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1230:25391:12364,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1326:17730:24961,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1335:13297:18684,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1479:2003:6381,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2271:14122:18235,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2283:1898:6058,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2337:51716:16932,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2341:41984:22074,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2423:52088:22649,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1165:35941:28983,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1321:3751:29389,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1437:45042:16021,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1491:7796:1813,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1210:25456:14802,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1261:17528:13681,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1270:18976:25858,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1406:20537:2555,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2337:38263:8763

YES_LDAS

0.0684

1.8295

1.5058

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]"

chr6:147509387-chr6:147947472

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

HLA-S--HLA-A

19.0

0.0

ONLY_REF_SPLICE

HLA-S^ENSG00000225851.1

chr6:31382241:-

HLA-A^ENSG00000206503.13

chr6:29945451:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1108:20206:20085,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1153:45908:22845,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1154:7326:13751,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1195:31127:17058,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1312:36855:24653,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1365:19534:16988,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1422:41442:8777,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2287:20659:12042,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2328:4932:6465,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2344:46255:16946,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2447:24793:4629,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2480:20998:17114,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1223:34946:6885,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1297:51077:12434,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1440:44532:10823,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2142:32761:16694,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2311:12067:27848,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1216:40916:7278,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1376:28919:14578

YES_LDAS

0.065

1.9656

"[""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:1.44Mb]""]"

chr6:31382241-chr6:29945451

True

"pair|MHC

complexes|HLA-S

HLA-A;

pair|recurrent

breakpoints"

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

DHRSX--IGH@-ext

15.66

0.0

INCL_NON_REF_SPLICE

DHRSX^ENSG00000169084.15

chrX:2266785:-

IGH@-ext^IGH.g@-ext

chr14:105588393:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1217:32680:26923,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1233:44257:22369,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1244:44015:27385,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1389:9244:15419,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2203:21128:12770,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2277:25861:10122,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2413:19599:1911,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2456:1995:12392,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1110:16072:9674,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1136:15125:27876,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1211:29088:25774,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1243:26896:20743,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1325:44095:18109,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1407:47218:12924,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2264:7917:19931,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2281:9948:18179

NO_LDAS

0.0536

1.6402

1.5546

"[""INTERCHROMOSOMAL[chrY--chr14]""]"

chrX:2266785-chr14:105588393

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

CHCHD10--AC005064.1

16.0

0.0

INCL_NON_REF_SPLICE

CHCHD10^ENSG00000250479.9

chr22:23767834:-

AC005064.1^ENSG00000234715.2

chr7:103446122:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1150:12706:13569,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1180:42397:16624,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1180:43456:9155,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1201:27098:27876,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1202:28822:23041,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1222:6695:16638,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1238:20100:7292,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1308:30092:15545,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1316:11242:25269,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1363:32624:23882,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1363:46822:4335,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1372:23248:26979,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2130:21961:13121,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2346:48213:12854,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1287:36483:16918,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2302:21071:6899

NO_LDAS

0.0547

1.6402

1.1589

"[""INTERCHROMOSOMAL[chr22--chr7]""]"

chr22:23767834-chr7:103446122

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

SAMD5--SASH1

14.0

0.0

ONLY_REF_SPLICE

SAMD5^ENSG00000203727.4

chr6:147509387:+

SASH1^ENSG00000111961.18

chr6:148390134:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1103:10611:22719,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1177:21783:3480,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1362:19211:3816,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1496:51344:14326,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1497:41199:5890,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2190:4438:23658,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2241:4535:3424,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2310:46029:24765,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1148:45916:6857,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1477:19478:13527,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2103:35552:7292,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2276:21516:16049,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1241:16881:17773,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2297:46992:5442

YES_LDAS

0.0479

1.8295

1.9219

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.70Mb]""]"

chr6:147509387-chr6:148390134

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

ZNF493--IGH@-ext

13.0

0.0

INCL_NON_REF_SPLICE

ZNF493^ENSG00000196268.12

chr19:21397498:+

IGH@-ext^IGH.g@-ext

chr14:105587876:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1123:11007:27806,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1414:42421:25662,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2256:32365:7123,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2353:50106:3971,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2418:18669:8455,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1294:1526:29571,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1418:35221:28969,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2269:17601:22215,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2312:7270:28590,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2329:16654:11019,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2128:35706:19104,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2276:24380:17086,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2298:16727:25241

NO_LDAS

0.0445

1.8062

1.5546

"[""INTERCHROMOSOMAL[chr19--chr14]""]"

chr19:21397498-chr14:105587876

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NRIP1--LINC02246

13.0

0.0

ONLY_REF_SPLICE

NRIP1^ENSG00000180530.11

chr21:15064745:-

LINC02246^ENSG00000281903.2

chr21:14857708:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1210:41134:4601,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1254:2731:5288,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2187:49556:15377,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2355:1930:15503,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1207:48035:3186,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1303:43408:17030,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1315:2917:2471,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1335:36321:27511,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1196:46344:28338,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1281:12706:1687,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1431:14551:18726,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2411:45268:27932,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2485:41830:17436

YES_LDAS

0.0445

1.2729

1.5546

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.04Mb]"",""NEIGHBORS[42683]""]"

chr21:15064745-chr21:14857708

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

BPTF--DCXR

6.5

0.0

INCL_NON_REF_SPLICE

BPTF^ENSG00000171634.18

chr17:67945620:+

DCXR^ENSG00000169738.8

chr17:82037080:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1103:9349:27119,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1113:36588:14718,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1138:42591:13149,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1263:27163:15937,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1304:40633:27133,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2250:22811:6941,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2431:32543:15503,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1111:42138:22901,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1419:12010:1631,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1452:23482:28366,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1491:29986:17941,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2119:33821:19342,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2187:17034:9323

NO_LDAS

0.0222

1.5628

1.6049

"[""INTRACHROMOSOMAL[chr17:14.05Mb]""]"

chr17:67945620-chr17:82037080

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

BPTF--BSND

6.5

0.0

INCL_NON_REF_SPLICE

BPTF^ENSG00000171634.18

chr17:67945620:+

BSND^ENSG00000162399.9

chr1:55006997:+

NO_LDAS

0.0222

1.5628

1.4256

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:67945620-chr1:55006997

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

DHRSX--IGH@-ext

11.49

0.0

INCL_NON_REF_SPLICE

DHRSX^ENSG00000169084.15

chrX:2266788:-

IGH@-ext^IGH.g@-ext

chr14:105644791:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1195:6906:2289,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1352:26459:15755,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1364:6525:17997,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2154:13459:29417,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2247:30982:4923,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2123:17698:14368,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2237:49605:17030,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2288:51797:22004,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1337:13604:1392,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1452:6137:21248,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1483:13006:19216,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2223:4098:1210

NO_LDAS

0.0393

1.7465

1.8062

"[""INTERCHROMOSOMAL[chrY--chr14]""]"

chrX:2266788-chr14:105644791

True

pair|recurrent

breakpoints

Blacklisted

FAIL

PLCXD1--IGH@-ext

11.0

0.0

INCL_NON_REF_SPLICE

PLCXD1^ENSG00000182378.15

chrX:293089:+

IGH@-ext^IGH.g@-ext

chr14:105743073:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1139:51765:26965,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1483:50114:19538,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2117:10020:22761,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2231:15214:18866,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1181:16589:3957,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1203:14769:9884,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1310:10109:24457,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2125:27139:3508,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1219:38117:13583,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1224:12124:12392,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1421:11072:5582

NO_LDAS

0.0376

1.9086

1.7465

"[""INTERCHROMOSOMAL[chrX--chr14]""]"

chrX:293089-chr14:105743073

True

pair|recurrent

breakpoints

Blacklisted

FAIL

MRPS18A--PDC-AS1

9.43

0.0

INCL_NON_REF_SPLICE

MRPS18A^ENSG00000096080.12

chr6:43687668:-

PDC-AS1^ENSG00000229739.4

chr1:186459293:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1121:1461:1967,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1212:18806:25816,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1348:43901:16231,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2393:38521:1673,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1465:37534:16189,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2175:22989:16554,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1122:48132:17983,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2161:37866:27553,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2259:41911:29375,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2360:40520:8441

YES_LDAS

0.0323

1.7232

1.7819

"[""INTERCHROMOSOMAL[chr6--chr1]""]"

chr6:43687668-chr1:186459293

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

STK25--IGH@-ext

8.57

0.0

INCL_NON_REF_SPLICE

STK25^ENSG00000115694.15

chr2:241495500:-

IGH@-ext^IGH.g@-ext

chr14:105708667:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2366:5150:22397,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1243:22625:18866,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1249:47760:6521,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1383:34064:11888,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2122:20950:9884,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2267:13798:2597,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1165:10538:18866,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1208:50236:2597,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2165:7472:14340

NO_LDAS

0.0293

1.8892

1.6402

"[""INTERCHROMOSOMAL[chr2--chr14]""]"

chr2:241495500-chr14:105708667

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

PCDHGB1--PCDHGA10

9.0

0.0

INCL_NON_REF_SPLICE

PCDHGB1^ENSG00000254221.2

chr5:141352669:+

PCDHGA10^ENSG00000253846.2

chr5:141494807:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1114:11056:22957,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1122:11121:26993,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1133:25958:29571,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1154:38004:14228,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1213:16128:22187,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1328:32956:29333,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1494:51821:17731,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2127:15206:19692,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2253:3289:17801

YES_LDAS

0.0308

1.6895

1.3383

"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr5:0.06Mb]"",""NEIGHBORS[60294]""]"

chr5:141352669-chr5:141494807

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

IGH-@-ext--TNFRSF10B

8.13

0.0

INCL_NON_REF_SPLICE

IGH-@-ext^IGH-.g@-ext

chr14:105588395:+

TNFRSF10B^ENSG00000120889.13

chr8:23028497:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1140:35374:24751,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1143:36742:19384,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1179:29687:16133,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1265:42364:8889,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1430:5369:23672,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1450:48108:3508,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2277:25861:10122,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1307:25901:12574,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1343:23369:2611

NO_LDAS

0.0278

1.6729

1.6402

"[""INTERCHROMOSOMAL[chr14--chr8]""]"

chr14:105588395-chr8:23028497

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

OR51M1--ABR

8.0

0.0

INCL_NON_REF_SPLICE

OR51M1^ENSG00000184698.5

chr11:5392729:+

ABR^ENSG00000159842.15

chr17:1100735:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1112:3888:12448,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2107:6202:26600,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2156:41798:2051,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2213:14971:7964,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2221:51474:24050,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1301:49087:11958,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1393:9794:7376,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1216:12350:14914

YES_LDAS

0.0274

1.9656

1.5628

"[""INTERCHROMOSOMAL[chr11--chr17]""]"

chr11:5392729-chr17:1100735

True

pair|recurrent

breakpoints

Blacklisted

FAIL

MT-ND6--MTRNR2L12

4.0

0.0

INCL_NON_REF_SPLICE

MT-ND6^ENSG00000198695.2

chrM:14150:-

MTRNR2L12^ENSG00000269028.3

chr3:96617452:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1341:5797:17661,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1424:9422:21640,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2378:41240:15685,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1384:44516:1322,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2141:27212:15713,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2192:8030:26432,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2234:12245:27679,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2315:2448:3704

YES_LDAS

0.0137

1.8295

1.2419

"[""INTERCHROMOSOMAL[chrM--chr3]""]"

chrM:14150-chr3:96617452

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

KRTAP5-AS1--AP000867.5

8.0

0.0

INCL_NON_REF_SPLICE

KRTAP5-AS1^ENSG00000233930.4

chr11:1598289:+

AP000867.5^ENSG00000286948.1

chr11:71563684:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1287:13548:6171,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1381:30957:22173,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1428:21799:15531,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1470:43602:24905,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2103:46555:8749,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2129:23231:27848,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2378:45034:23630,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2101:31054:26685

YES_LDAS

0.0274

1.6895

1.8295

"[""INTRACHROMOSOMAL[chr11:69.96Mb]""]"

chr11:1598289-chr11:71563684

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

RN7SKP80--RN7SKP250

7.0

0.0

INCL_NON_REF_SPLICE

RN7SKP80^ENSG00000202058.1

chr22:42565092:-

RN7SKP250^ENSG00000200794.1

chr12:109662995:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1481:36823:28632,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2258:43408:17338,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2267:6412:18669,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1415:39371:16147,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1106:24323:12196,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1189:32907:4587,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1356:28716:14003

YES_LDAS

0.0239

1.7968

1.9329

"[""INTERCHROMOSOMAL[chr22--chr12]""]"

chr22:42565092-chr12:109662995

False

Read

count

too

low:

FAIL

PDXDC1--NPIPB3

2.22

0.0

ONLY_REF_SPLICE

PDXDC1^ENSG00000179889.19

chr16:15030056:+

NPIPB3^ENSG00000169246.16

chr16:21425378:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1115:42453:1056,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1138:40536:27077,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1286:49103:18908,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1333:43659:22032,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2464:34582:14017,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2475:11266:11607,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2489:42599:26306

YES_LDAS

0.0076

1.9329

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:6.26Mb]""]"

chr16:15030056-chr16:21425378

False

Excluded

annotation

pattern:

GTEx_recurrent_StarF2019

FAIL

KRT18P17--IGH@-ext

2.26

0.0

INCL_NON_REF_SPLICE

KRT18P17^ENSG00000213943.3

chr3:12788561:-

IGH@-ext^IGH.g@-ext

chr14:105588394:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1209:20675:6437,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1314:44621:7530,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2120:30399:15629,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2148:5992:21584,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1228:12447:2079,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1470:37486:5204,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2154:31321:25213

NO_LDAS

0.0077

1.9329

1.5546

"[""INTERCHROMOSOMAL[chr3--chr14]""]"

chr3:12788561-chr14:105588394

True

pair|recurrent

breakpoints

Blacklisted

FAIL

EWSR1--DOC2GP

7.0

0.0

INCL_NON_REF_SPLICE

EWSR1^ENSG00000182944.18

chr22:29299721:+

DOC2GP^ENSG00000231793.5

chr11:67613605:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1179:26055:17549,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1186:4576:1476,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1244:45908:16175,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2186:48634:24288,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1272:45843:20575,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1417:37963:1294,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2366:46773:1364

NO_LDAS

0.0239

1.7465

1.6402

"[""INTERCHROMOSOMAL[chr22--chr11]""]"

chr22:29299721-chr11:67613605

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

UMAD1--GLCCI1

6.0

0.0

ONLY_REF_SPLICE

UMAD1^ENSG00000219545.11

chr7:7801743:+

GLCCI1^ENSG00000106415.13

chr7:8003908:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1333:13402:2976,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1482:7423:16722,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2422:30998:4671,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2438:18296:17787,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1349:16759:16133,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1419:21379:3592

YES_LDAS

0.0205

1.9656

1.7465

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[776]""]"

chr7:7801743-chr7:8003908

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

GRAMD1A--RAB11FIP3

1.33

0.0

INCL_NON_REF_SPLICE

GRAMD1A^ENSG00000089351.15

chr19:35000449:+

RAB11FIP3^ENSG00000090565.17

chr16:426178:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1110:24210:20071,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1128:46021:4153,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2234:31257:2569,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2350:38392:25802,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1230:15255:9604,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2112:20578:18207

NO_LDAS

0.0045

1.371

1.2729

"[""INTERCHROMOSOMAL[chr19--chr16]""]"

chr19:35000449-chr16:426178

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GOLGA2P8--ZNF774

6.0

0.0

INCL_NON_REF_SPLICE

GOLGA2P8^ENSG00000214433.4

chr15:90295226:+

ZNF774^ENSG00000196391.11

chr15:90354642:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1250:51150:21136,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1437:44063:17913,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1447:12965:23966,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2310:8548:29123,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2415:21662:9183,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1110:29250:23364

YES_LDAS

0.0205

1.5329

1.9899

"[""INTRACHROMOSOMAL[chr15:0.06Mb]"",""NEIGHBORS[56601]""]"

chr15:90295226-chr15:90354642

True

pair|recurrent

breakpoints

Blacklisted

FAIL

CYREN--AC083870.1

6.0

0.0

INCL_NON_REF_SPLICE

CYREN^ENSG00000122783.17

chr7:135167732:-

AC083870.1^ENSG00000286458.1

chr7:134998151:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1169:48901:17296,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1494:23118:6549,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2295:16080:16385,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2396:1170:7039,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2473:30731:1603,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1223:52121:27777

YES_LDAS

0.0205

1.9329

1.8256

"[""INTRACHROMOSOMAL[chr7:0.09Mb]"",""NEIGHBORS[94210]""]"

chr7:135167732-chr7:134998151

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

C22orf39--IGH@-ext

5.71

0.0

INCL_NON_REF_SPLICE

C22orf39^ENSG00000242259.9

chr22:19356982:-

IGH@-ext^IGH.g@-ext

chr14:105708666:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1173:27948:3676,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2327:24283:2457,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1276:45835:6969,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1339:27657:5358,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1381:36321:21934,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2217:9349:29501

NO_LDAS

0.0195

1.5301

1.7465

"[""INTERCHROMOSOMAL[chr22--chr14]""]"

chr22:19356982-chr14:105708666

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

STK25--IGH@-ext

5.0

0.0

INCL_NON_REF_SPLICE

STK25^ENSG00000115694.15

chr2:241495500:-

IGH@-ext^IGH.g@-ext

chr14:105743073:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2133:8338:23770,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2420:31451:13779,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2452:4899:27988,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2105:50074:28969,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2342:8467:16035

NO_LDAS

0.0171

1.8892

1.7465

"[""INTERCHROMOSOMAL[chr2--chr14]""]"

chr2:241495500-chr14:105743073

True

pair|recurrent

breakpoints

Blacklisted

FAIL

RHOD--LASP1

5.0

0.0

INCL_NON_REF_SPLICE

RHOD^ENSG00000173156.7

chr11:67071464:+

LASP1^ENSG00000002834.18

chr17:38919039:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1178:32025:28002,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1460:44411:15405,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1468:3435:3452,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2407:25561:12686,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2467:40803:3186

YES_LDAS

0.0171

1.6402

"[""INTERCHROMOSOMAL[chr11--chr17]""]"

chr11:67071464-chr17:38919039

False

Read

count

too

low:

FAIL

MRPS18A--AC061975.8

1.57

0.0

INCL_NON_REF_SPLICE

MRPS18A^ENSG00000096080.12

chr6:43687668:-

AC061975.8^ENSG00000287721.1

chr17:28223196:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1160:21087:4769,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1348:43901:16231,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1465:37534:16189,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2175:22989:16554,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2161:37866:27553

YES_LDAS

0.0054

1.7232

1.7819

"[""INTERCHROMOSOMAL[chr6--chr17]""]"

chr6:43687668-chr17:28223196

True

pair|recurrent

breakpoints

Blacklisted

FAIL

IGH@-ext--C1QBP

5.0

0.0

INCL_NON_REF_SPLICE

IGH@-ext^IGH.g@-ext

chr14:105708359:-

C1QBP^ENSG00000108561.8

chr17:5438696:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1383:3298:11705,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2152:27260:17647,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2212:49912:28184,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1148:9624:15769,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1466:25513:16694

NO_LDAS

0.0171

1.7465

1.053

"[""INTERCHROMOSOMAL[chr14--chr17]""]"

chr14:105708359-chr17:5438696

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

C22orf39--IGH@-ext

5.0

0.0

INCL_NON_REF_SPLICE

C22orf39^ENSG00000242259.9

chr22:19356982:-

IGH@-ext^IGH.g@-ext

chr14:105743072:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1103:22382:28926,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1492:5619:1911,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2292:1922:9267,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1363:40746:28254,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1306:51805:8427

NO_LDAS

0.0171

1.5301

1.8062

"[""INTERCHROMOSOMAL[chr22--chr14]""]"

chr22:19356982-chr14:105743072

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AC138393.1--SEPTIN14

1.67

0.0

ONLY_REF_SPLICE

AC138393.1^ENSG00000229930.1

chr1:224030704:-

SEPTIN14^ENSG00000154997.9

chr7:55796092:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1192:12334:12952,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1414:3451:12392,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2375:26839:20001,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2413:29695:18726,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2419:34145:28086

YES_LDAS

0.0057

1.7819

1.9899

"[""INTERCHROMOSOMAL[chr1--chr7]""]"

chr1:224030704-chr7:55796092

True

aih_curated_blacklist

score(5)

aih_curated_blacklist

score(5)

FAIL

AC092691.1--LSAMP

5.0

0.0

ONLY_REF_SPLICE

AC092691.1^ENSG00000239268.3

chr3:117997182:-

LSAMP^ENSG00000185565.12

chr3:116444955:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1223:41426:6983,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2139:40002:16960,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1277:24825:4909,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1243:29873:9926,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2194:47331:11495

YES_LDAS

0.0171

1.8892

1.9329

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.53Mb]""]"

chr3:117997182-chr3:116444955

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

ABLIM3--PTPRB

5.0

0.0

INCL_NON_REF_SPLICE

ABLIM3^ENSG00000173210.20

chr5:149251419:+

PTPRB^ENSG00000127329.16

chr12:70558894:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1237:43149:15713,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1267:19866:5596,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1279:28377:9856,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1133:46320:17675,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2208:11339:19104

NO_LDAS

0.0171

1.8295

1.8892

"[""INTERCHROMOSOMAL[chr5--chr12]""]"

chr5:149251419-chr12:70558894

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

STK25--IGH@-ext

4.0

0.0

INCL_NON_REF_SPLICE

STK25^ENSG00000115694.15

chr2:241495500:-

IGH@-ext^IGH.g@-ext

chr14:105845680:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1224:27721:7740,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1341:36216:6255,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2462:11622:7684,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2125:17042:22957

NO_LDAS

0.0137

1.8892

1.5058

"[""INTERCHROMOSOMAL[chr2--chr14]""]"

chr2:241495500-chr14:105845680

True

pair|recurrent

breakpoints

Blacklisted

FAIL

SEPTIN14--AP006222.1

4.0

0.0

INCL_NON_REF_SPLICE

SEPTIN14^ENSG00000154997.9

chr7:55795924:-

AP006222.1^ENSG00000228463.10

chr1:289370:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1240:36305:12518,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2308:44824:3088,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1372:26629:12966,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1318:8580:24443

YES_LDAS

0.0137

1.5546

1.7968

"[""INTERCHROMOSOMAL[chr7--chr1]""]"

chr7:55795924-chr1:289370

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

RRBP1--AC091044.1

4.0

0.0

INCL_NON_REF_SPLICE

RRBP1^ENSG00000125844.16

chr20:17660073:-

AC091044.1^ENSG00000267196.1

chr18:49970952:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1326:18911:18459,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1327:3476:27988,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2166:10085:5582,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2253:38950:14186

NO_LDAS

0.0137

0.8366

1.7056

"[""INTERCHROMOSOMAL[chr20--chr18]""]"

chr20:17660073-chr18:49970952

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PCGF6--C10orf99

2.0

0.0

INCL_NON_REF_SPLICE

PCGF6^ENSG00000156374.16

chr10:103350983:-

C10orf99^ENSG00000188373.5

chr10:84184831:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1130:30537:21220,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1345:31038:20968,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1150:13184:7838,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1158:23992:20561

NO_LDAS

0.0068

1.2419

1.231

"[""INTRACHROMOSOMAL[chr10:19.12Mb]""]"

chr10:103350983-chr10:84184831

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LEPROT--LEPR

4.0

0.0

ONLY_REF_SPLICE

LEPROT^ENSG00000213625.9

chr1:65425378:+

LEPR^ENSG00000116678.20

chr1:65565546:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1129:30828:6787,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1137:31111:26110,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1143:50616:25255,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1220:25804:29333

YES_LDAS

0.0137

1.8256

1.9219

"[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.09Mb]"",""NEIGHBORS[89682]""]"

chr1:65425378-chr1:65565546

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AL139383.1--STARD13

4.0

0.0

ONLY_REF_SPLICE

AL139383.1^ENSG00000230490.3

chr13:33359465:-

STARD13^ENSG00000133121.21

chr13:33167622:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1345:41134:4601,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1272:17479:13625,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1311:12520:22243,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1457:42016:12378

YES_LDAS

0.0137

1.6895

1.6402

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.00Mb]"",""NEIGHBORS[4576]""]"

chr13:33359465-chr13:33167622

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AC004923.1--ENPP7P3

4.0

0.0

INCL_NON_REF_SPLICE

AC004923.1^ENSG00000254610.3

chr11:67955482:-

ENPP7P3^ENSG00000248618.1

chr3:130167943:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1121:46215:9477,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1152:15602:29291,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1282:44702:13611,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1131:36426:17100

YES_LDAS

0.0137

1.4566

1.7819

"[""INTERCHROMOSOMAL[chr11--chr3]""]"

chr11:67955482-chr3:130167943

True

pair|recurrent

breakpoints

Blacklisted

FAIL

WASH3P--LINC01237

0.5

0.0

ONLY_REF_SPLICE

WASH3P^ENSG00000185596.16

chr15:101966223:+

LINC01237^ENSG00000233806.7

chr2:242078460:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1254:31418:23980,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2498:40690:4055,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1198:49839:1771

YES_LDAS

0.0017

1.9656

1.8295

"[""INTERCHROMOSOMAL[chr15--chr2]""]"

chr15:101966223-chr2:242078460

False

Read

count

too

low:

FAIL

SEPTIN14--AP006222.1

1.5

0.0

INCL_NON_REF_SPLICE

SEPTIN14^ENSG00000154997.9

chr7:55795924:-

AP006222.1^ENSG00000228463.10

chr1:297502:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1211:31378:16371,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1437:11517:21710,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1251:40285:21178

YES_LDAS

0.0051

1.5546

1.9086

"[""INTERCHROMOSOMAL[chr7--chr1]""]"

chr7:55795924-chr1:297502

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

SEPTIN14--AL031259.1

1.5

0.0

INCL_NON_REF_SPLICE

SEPTIN14^ENSG00000154997.9

chr7:55795924:-

AL031259.1^ENSG00000287411.1

chr6:170614324:+

YES_LDAS

0.0051

1.5546

1.9086

"[""INTERCHROMOSOMAL[chr7--chr6]""]"

chr7:55795924-chr6:170614324

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

SAMD5--AL033504.1

3.0

0.0

INCL_NON_REF_SPLICE

SAMD5^ENSG00000203727.4

chr6:147509387:+

AL033504.1^ENSG00000227681.5

chr6:147692400:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1162:41992:16400,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2218:3322:6955,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2193:7359:4447

YES_LDAS

0.0103

1.8295

1.6895

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]"

chr6:147509387-chr6:147692400

True

pair|recurrent

breakpoints

Blacklisted

FAIL

RPL17--RPL17P12

3.0

0.0

INCL_NON_REF_SPLICE

RPL17^ENSG00000265681.7

chr18:49491405:-

RPL17P12^ENSG00000230559.1

chr2:146194373:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1116:47890:29613,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1223:45082:22088,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1293:32583:3018

NO_LDAS

0.0103

1.9219

1.8892

"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTERCHROMOSOMAL[chr18--chr2]""]"

chr18:49491405-chr2:146194373

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

PKNOX2--MEIS3

3.0

0.0

ONLY_REF_SPLICE

PKNOX2^ENSG00000165495.16

chr11:125385722:+

MEIS3^ENSG00000105419.18

chr19:47417350:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1111:42469:26755,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1453:12941:11145,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1157:6089:18165

NO_LDAS

0.0103

1.9656

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr19]""]"

chr11:125385722-chr19:47417350

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

MIR4435-2HG--AC083899.1

3.0

0.0

ONLY_REF_SPLICE

MIR4435-2HG^ENSG00000172965.17

chr2:111344061:-

AC083899.1^ENSG00000204745.4

chr2:87125198:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1178:8273:11075,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2284:27511:14718,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2471:33967:13989

YES_LDAS

0.0103

1.8295

1.8062

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr2:23.81Mb]""]"

chr2:111344061-chr2:87125198

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

LILRB1--LILRA5

3.0

0.0

ONLY_REF_SPLICE

LILRB1^ENSG00000104972.15

chr19:54631107:+

LILRA5^ENSG00000187116.14

chr19:54312370:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1109:51474:10907,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1140:27600:21962,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1283:15902:9155

YES_LDAS

0.0103

1.7819

1.7465

"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.30Mb]""]"

chr19:54631107-chr19:54312370

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

LEPROTL1--SMG1P1

1.0

0.0

ONLY_REF_SPLICE

LEPROTL1^ENSG00000104660.19

chr8:30104991:+

SMG1P1^ENSG00000237296.9

chr16:22451620:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1132:33012:28478,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2210:35779:28590,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2289:44824:21304

NO_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr8--chr16]""]"

chr8:30104991-chr16:22451620

True

pair|recurrent

breakpoints

Blacklisted

FAIL

INPP5D--SRSF5

1.5

0.0

INCL_NON_REF_SPLICE

INPP5D^ENSG00000168918.14

chr2:233125886:+

SRSF5^ENSG00000100650.16

chr14:69766919:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1302:50737:16526,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1360:2529:6787,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1433:28061:3788

NO_LDAS

0.0051

1.8892

1.5301

"[""INTERCHROMOSOMAL[chr2--chr14]""]"

chr2:233125886-chr14:69766919

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

INPP5D--ADRA2A

1.5

0.0

INCL_NON_REF_SPLICE

INPP5D^ENSG00000168918.14

chr2:233125886:+

ADRA2A^ENSG00000150594.7

chr10:111078588:+

NO_LDAS

0.0051

1.8892

1.2729

"[""INTERCHROMOSOMAL[chr2--chr10]""]"

chr2:233125886-chr10:111078588

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CMTM8--CMTM7

3.0

0.0

ONLY_REF_SPLICE

CMTM8^ENSG00000170293.9

chr3:32239119:+

CMTM7^ENSG00000153551.14

chr3:32441840:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2120:45471:29459,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2213:29550:5302,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1110:34703:17366

YES_LDAS

0.0103

1.9656

1.9086

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[21377]""]"

chr3:32239119-chr3:32441840

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AC026191.1--SRGAP3

3.0

0.0

ONLY_REF_SPLICE

AC026191.1^ENSG00000254485.5

chr3:9326010:-

SRGAP3^ENSG00000196220.16

chr3:9124917:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2426:28951:22565,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2446:48149:20645,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2267:27155:7936

YES_LDAS

0.0103

1.9656

1.8062

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.04Mb]"",""NEIGHBORS[42903]""]"

chr3:9326010-chr3:9124917

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

ZNF891--EIF3I

2.0

0.0

INCL_NON_REF_SPLICE

ZNF891^ENSG00000214029.6

chr12:133117942:-

EIF3I^ENSG00000084623.12

chr1:32234327:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1179:43384:15222,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2358:38287:18249

YES_LDAS

0.0068

0.7219

1.9656

"[""INTERCHROMOSOMAL[chr12--chr1]""]"

chr12:133117942-chr1:32234327

False

Read

count

too

low:

FAIL

ZNF587B--ZNF417

2.0

0.0

ONLY_REF_SPLICE

ZNF587B^ENSG00000269343.9

chr19:57839149:+

ZNF417^ENSG00000173480.11

chr19:57912186:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1193:2068:21150,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2114:22981:28030

YES_LDAS

0.0068

1.7819

1.9329

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.05Mb]"",""LOCAL_INVERSION:+:-:[54058]""]"

chr19:57839149-chr19:57912186

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ZNF586--ZNF587B

2.0

0.0

ONLY_REF_SPLICE

ZNF586^ENSG00000083828.16

chr19:57769878:+

ZNF587B^ENSG00000269343.9

chr19:57839023:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1338:47793:27371,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2225:45584:5722

YES_LDAS

0.0068

1.8323

1.9656

"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr19:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[218]""]"

chr19:57769878-chr19:57839023

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ZNF346--RBM47

2.0

0.0

ONLY_REF_SPLICE

ZNF346^ENSG00000113761.12

chr5:177022913:+

RBM47^ENSG00000163694.15

chr4:40544506:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2118:43440:3887,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1164:3354:10963

YES_LDAS

0.0068

1.3996

1.8892

"[""INTERCHROMOSOMAL[chr5--chr4]""]"

chr5:177022913-chr4:40544506

False

Read

count

too

low:

FAIL

ZC3H10--SRRM2

2.0

0.0

INCL_NON_REF_SPLICE

ZC3H10^ENSG00000135482.7

chr12:56118340:+

SRRM2^ENSG00000167978.17

chr16:2761696:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1231:8491:2429,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2147:19971:9337

NO_LDAS

0.0068

1.7968

1.6402

"[""INTERCHROMOSOMAL[chr12--chr16]""]"

chr12:56118340-chr16:2761696

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

VTI1A--AL158212.1

2.0

0.0

ONLY_REF_SPLICE

VTI1A^ENSG00000151532.14

chr10:112668998:+

AL158212.1^ENSG00000225292.2

chr10:112905977:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2168:51643:28156,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1203:44047:11832

YES_LDAS

0.0068

1.7465

1.9899

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:0.07Mb]"",""NEIGHBORS[69991]""]"

chr10:112668998-chr10:112905977

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

TUBB--BATF3

2.0

0.0

INCL_NON_REF_SPLICE

TUBB^ENSG00000196230.14

chr6:30724523:+

BATF3^ENSG00000123685.9

chr1:212698428:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1111:21573:5386,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1295:30302:25213

NO_LDAS

0.0068

1.4295

1.9329

"[""INTERCHROMOSOMAL[chr6--chr1]""]"

chr6:30724523-chr1:212698428

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TRIM14--CHMP1A

2.0

0.0

ONLY_REF_SPLICE

TRIM14^ENSG00000106785.15

chr9:98087442:-

CHMP1A^ENSG00000131165.16

chr16:89647331:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1280:43578:10598,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1310:51215:27497

YES_LDAS

0.0068

1.8892

"[""INTERCHROMOSOMAL[chr9--chr16]""]"

chr9:98087442-chr16:89647331

False

Read

count

too

low:

FAIL

TPST2--ZSCAN29

0.67

0.0

INCL_NON_REF_SPLICE

TPST2^ENSG00000128294.16

chr22:26590094:-

ZSCAN29^ENSG00000140265.12

chr15:43371005:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1235:12868:5358,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1270:9907:14130

NO_LDAS

0.0023

1.6729

0.971

"[""INTERCHROMOSOMAL[chr22--chr15]""]"

chr22:26590094-chr15:43371005

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TPPP--BRD9

2.0

0.0

ONLY_REF_SPLICE

TPPP^ENSG00000171368.12

chr5:693278:-

BRD9^ENSG00000028310.18

chr5:879889:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2306:39104:29053,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2383:20416:11733

YES_LDAS

0.0068

1.8892

1.585

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.16Mb]""]"

chr5:693278-chr5:879889

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

TPM2--AC133552.1

2.0

0.0

INCL_NON_REF_SPLICE

TPM2^ENSG00000198467.16

chr9:35682024:-

AC133552.1^ENSG00000260714.1

chr16:25017706:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2320:22244:28520,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2431:15158:2065

NO_LDAS

0.0068

1.7465

1.9086

"[""INTERCHROMOSOMAL[chr9--chr16]""]"

chr9:35682024-chr16:25017706

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TMEM72--PTPRH

2.0

0.0

INCL_NON_REF_SPLICE

TMEM72^ENSG00000187783.12

chr10:44935543:+

PTPRH^ENSG00000080031.10

chr19:55204021:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1217:3629:13065,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1146:3111:24134

NO_LDAS

0.0068

1.9086

1.9329

"[""INTERCHROMOSOMAL[chr10--chr19]""]"

chr10:44935543-chr19:55204021

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TMEM39B--ARHGEF37

2.0

0.0

ONLY_REF_SPLICE

TMEM39B^ENSG00000121775.18

chr1:32076254:+

ARHGEF37^ENSG00000183111.12

chr5:149597759:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1341:27204:21024,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1221:45236:22551

NO_LDAS

0.0068

1.9329

1.9899

"[""INTERCHROMOSOMAL[chr1--chr5]""]"

chr1:32076254-chr5:149597759

True

pair|recurrent

breakpoints

Blacklisted

FAIL

TLR4--AL160272.1

2.0

0.0

ONLY_REF_SPLICE

TLR4^ENSG00000136869.16

chr9:117704565:+

AL160272.1^ENSG00000284977.2

chr9:117848065:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1331:5247:19622,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1228:42591:28926

YES_LDAS

0.0068

1.7968

1.8892

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.03Mb]"",""NEIGHBORS[34720]""]"

chr9:117704565-chr9:117848065

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

TJP1--AC019077.1

2.0

0.0

ONLY_REF_SPLICE

TJP1^ENSG00000104067.17

chr15:29704162:-

AC019077.1^ENSG00000214559.3

chr4:98252005:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2384:28255:4797,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1484:9648:24050

NO_LDAS

0.0068

1.7465

1.8256

"[""INTERCHROMOSOMAL[chr15--chr4]""]"

chr15:29704162-chr4:98252005

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

SYS1--DBNDD2

2.0

0.0

ONLY_REF_SPLICE

SYS1^ENSG00000204070.10

chr20:45365686:+

DBNDD2^ENSG00000244274.8

chr20:45408460:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2160:4721:28912,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1469:27568:18880

YES_LDAS

0.0068

1.7232

1.9329

"[""INTRACHROMOSOMAL[chr20:0.03Mb]"",""NEIGHBORS[29259]""]"

chr20:45365686-chr20:45408460

True

pair|recurrent

breakpoints

Blacklisted

FAIL

SRSF6--L3MBTL1

2.0

0.0

ONLY_REF_SPLICE

SRSF6^ENSG00000124193.16

chr20:43460598:+

L3MBTL1^ENSG00000185513.17

chr20:43513476:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1124:50576:29725,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1217:19906:27189

YES_LDAS

0.0068

1.9086

1.8892

"[""INTRACHROMOSOMAL[chr20:0.02Mb]"",""NEIGHBORS[23396]""]"

chr20:43460598-chr20:43513476

True

pair|recurrent

breakpoints

Blacklisted

FAIL

SNU13--LLPH

2.0

0.0

ONLY_REF_SPLICE

SNU13^ENSG00000100138.15

chr22:41680244:-

LLPH^ENSG00000139233.7

chr12:66129113:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1222:47259:10052,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1133:17601:2149

YES_LDAS

0.0068

1.7056

1.8295

"[""INTERCHROMOSOMAL[chr22--chr12]""]"

chr22:41680244-chr12:66129113

False

Read

count

too

low:

FAIL

SHISA9--U91319.1

2.0

0.0

ONLY_REF_SPLICE

SHISA9^ENSG00000237515.9

chr16:13203549:+

U91319.1^ENSG00000262801.6

chr16:13350180:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2375:2408:22355,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1238:38416:24807

YES_LDAS

0.0068

1.9899

1.9656

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[5816]""]"

chr16:13203549-chr16:13350180

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

SFPQ--RUFY2

1.0

0.0

INCL_NON_REF_SPLICE

SFPQ^ENSG00000116560.11

chr1:35192817:-

RUFY2^ENSG00000204130.14

chr10:68407209:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1105:15052:4181,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1150:47008:13569

NO_LDAS

0.0034

1.4566

1.3996

"[""INTERCHROMOSOMAL[chr1--chr10]""]"

chr1:35192817-chr10:68407209

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SECISBP2--ARHGAP26

2.0

0.0

ONLY_REF_SPLICE

SECISBP2^ENSG00000187742.15

chr9:89319797:+

ARHGAP26^ENSG00000145819.18

chr5:142932047:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1269:10336:7810,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2448:11679:9912

YES_LDAS

0.0068

1.7819

1.9656

"[""INTERCHROMOSOMAL[chr9--chr5]""]"

chr9:89319797-chr5:142932047

False

Read

count

too

low:

FAIL

SAMHD1--POT1-AS1

2.0

0.0

INCL_NON_REF_SPLICE

SAMHD1^ENSG00000101347.10

chr20:36951436:-

POT1-AS1^ENSG00000224897.8

chr7:124993129:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1390:18183:23700,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2142:6833:10066

NO_LDAS

0.0068

1.8892

1.6049

"[""INTERCHROMOSOMAL[chr20--chr7]""]"

chr20:36951436-chr7:124993129

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SAMD5--AL033504.1

2.0

0.0

ONLY_REF_SPLICE

SAMD5^ENSG00000203727.4

chr6:147509387:+

AL033504.1^ENSG00000227681.5

chr6:147733729:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1425:4810:1827,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1249:5668:16147

YES_LDAS

0.0068

1.8295

1.5219

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]"

chr6:147509387-chr6:147733729

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

RTN4--TULP1

2.0

0.0

INCL_NON_REF_SPLICE

RTN4^ENSG00000115310.18

chr2:55050142:-

TULP1^ENSG00000112041.13

chr6:35511005:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1174:46296:4769,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1491:6865:14017

YES_LDAS

0.0068

1.7232

0.971

"[""INTERCHROMOSOMAL[chr2--chr6]""]"

chr2:55050142-chr6:35511005

False

Read

count

too

low:

FAIL

RPSA--AC139769.1

2.0

0.0

INCL_NON_REF_SPLICE

RPSA^ENSG00000168028.14

chr3:39412341:+

AC139769.1^ENSG00000233836.7

chr19:23831597:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1164:26912:21248,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1322:35714:19762

YES_LDAS

0.0068

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr3--chr19]""]"

chr3:39412341-chr19:23831597

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

RPS6KA3--SH3KBP1

2.0

0.0

ONLY_REF_SPLICE

RPS6KA3^ENSG00000177189.14

chrX:20266564:-

SH3KBP1^ENSG00000147010.18

chrX:19836282:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2295:31952:6437,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2410:48771:3480

NO_LDAS

0.0068

1.9086

1.8295

"[""INTRACHROMOSOMAL[chrX:0.26Mb]""]"

chrX:20266564-chrX:19836282

False

Read

count

too

low:

FAIL

RPN1--L3MBTL4

2.0

0.0

INCL_NON_REF_SPLICE

RPN1^ENSG00000163902.12

chr3:128650534:-

L3MBTL4^ENSG00000154655.16

chr18:6030994:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1103:21322:25381,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1291:35900:5204

NO_LDAS

0.0068

1.7232

1.5058

"[""INTERCHROMOSOMAL[chr3--chr18]""]"

chr3:128650534-chr18:6030994

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

ROR1--AC034195.1

2.0

0.0

INCL_NON_REF_SPLICE

ROR1^ENSG00000185483.12

chr1:63774508:+

AC034195.1^ENSG00000223727.6

chr3:3315577:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1180:44128:19847,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1372:46231:21724

NO_LDAS

0.0068

1.8323

1.6895

"[""INTERCHROMOSOMAL[chr1--chr3]""]"

chr1:63774508-chr3:3315577

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RBFOX1--ASNS

2.0

0.0

INCL_NON_REF_SPLICE

RBFOX1^ENSG00000078328.22

chr16:5240105:+

ASNS^ENSG00000070669.17

chr7:97872449:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2168:2885:1799,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2388:18474:22383

YES_LDAS

0.0068

1.4566

1.9219

"[""INTERCHROMOSOMAL[chr16--chr7]""]"

chr16:5240105-chr7:97872449

True

pair|recurrent

breakpoints

Blacklisted

FAIL

PTPRM--MAML3

2.0

0.0

ONLY_REF_SPLICE

PTPRM^ENSG00000173482.17

chr18:7567891:+

MAML3^ENSG00000196782.12

chr4:139890967:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2173:27737:24555,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2306:3314:18627

YES_LDAS

0.0068

1.9656

"[""INTERCHROMOSOMAL[chr18--chr4]""]"

chr18:7567891-chr4:139890967

False

Read

count

too

low:

FAIL

PTPRK--RBMY2EP

2.0

0.0

ONLY_REF_SPLICE

PTPRK^ENSG00000152894.15

chr6:128322039:-

RBMY2EP^ENSG00000223637.7

chrY:21395981:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1263:30221:13835,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1263:30237:13835

YES_LDAS

0.0068

1.8892

1.7819

"[""INTERCHROMOSOMAL[chr6--chrY]""]"

chr6:128322039-chrY:21395981

False

Read

count

too

low:

FAIL

PRR7--MED29

2.0

0.0

INCL_NON_REF_SPLICE

PRR7^ENSG00000131188.12

chr5:177455441:+

MED29^ENSG00000063322.15

chr19:39397661:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1178:10781:28114,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1410:30520:27946

NO_LDAS

0.0068

1.3753

1.4716

"[""INTERCHROMOSOMAL[chr5--chr19]""]"

chr5:177455441-chr19:39397661

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

POLR2J2--STYXL1

2.0

0.0

INCL_NON_REF_SPLICE

POLR2J2^ENSG00000228049.7

chr7:102666077:-

STYXL1^ENSG00000127952.17

chr7:76030524:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2403:20068:27890,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2434:28199:19889

YES_LDAS

0.0068

1.9086

1.7819

"[""INTRACHROMOSOMAL[chr7:26.62Mb]""]"

chr7:102666077-chr7:76030524

False

Read

count

too

low:

FAIL

POLR2J2--AC004951.2

1.0

0.0

INCL_NON_REF_SPLICE

POLR2J2^ENSG00000228049.7

chr7:102666077:-

AC004951.2^ENSG00000239556.4

chr7:43988247:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1150:14397:17114,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2303:36378:19762

YES_LDAS

0.0034

1.9086

1.7465

"[""INTRACHROMOSOMAL[chr7:58.68Mb]""]"

chr7:102666077-chr7:43988247

False

Read

count

too

low:

FAIL

POLR2J2--AC004951.2

1.0

0.0

INCL_NON_REF_SPLICE

POLR2J2^ENSG00000228049.7

chr7:102666077:-

AC004951.2^ENSG00000239556.4

chr7:43986677:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1458:47833:4797,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2169:15611:24681

YES_LDAS

0.0034

1.9086

1.8323

"[""INTRACHROMOSOMAL[chr7:58.68Mb]""]"

chr7:102666077-chr7:43986677

False

Read

count

too

low:

FAIL

POLD3--ICAM3

2.0

0.0

INCL_NON_REF_SPLICE

POLD3^ENSG00000077514.9

chr11:74668792:+

ICAM3^ENSG00000076662.10

chr19:10335728:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1114:44047:16203,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1206:31240:15685

NO_LDAS

0.0068

1.9219

1.6895

"[""INTERCHROMOSOMAL[chr11--chr19]""]"

chr11:74668792-chr19:10335728

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLA2G4B--CFLAR

2.0

0.0

ONLY_REF_SPLICE

PLA2G4B^ENSG00000243708.11

chr15:41842591:+

CFLAR^ENSG00000003402.20

chr2:201142645:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1257:35504:13765,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1284:11088:18025

NO_LDAS

0.0068

1.231

1.8295

"[""INTERCHROMOSOMAL[chr15--chr2]""]"

chr15:41842591-chr2:201142645

False

Read

count

too

low:

FAIL

PIK3R1--RHOB

2.0

0.0

INCL_NON_REF_SPLICE

PIK3R1^ENSG00000145675.15

chr5:68299259:+

RHOB^ENSG00000143878.10

chr2:20447607:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2338:10651:18698,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1210:23425:22046

YES_LDAS

0.0068

1.7056

1.7465

"[""INTERCHROMOSOMAL[chr5--chr2]""]"

chr5:68299259-chr2:20447607

False

Read

count

too

low:

FAIL

PDE8A--DRAIC

2.0

0.0

ONLY_REF_SPLICE

PDE8A^ENSG00000073417.15

chr15:84982348:+

DRAIC^ENSG00000245750.10

chr15:69619509:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1223:24032:3452,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1395:10376:18838

YES_LDAS

0.0068

1.5058

1.9086

"[""INTRACHROMOSOMAL[chr15:15.14Mb]""]"

chr15:84982348-chr15:69619509

False

Read

count

too

low:

FAIL

NUSAP1--STRC

1.0

0.0

INCL_NON_REF_SPLICE

NUSAP1^ENSG00000137804.14

chr15:41349241:+

STRC^ENSG00000242866.10

chr15:43618770:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2405:37866:27441,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1322:49726:18473

YES_LDAS

0.0034

1.8892

1.7968

"[""INTRACHROMOSOMAL[chr15:2.22Mb]""]"

chr15:41349241-chr15:43618770

False

Read

count

too

low:

FAIL

NSUN5P2--CORO6

1.0

0.0

INCL_NON_REF_SPLICE

NSUN5P2^ENSG00000106133.18

chr7:72948528:-

CORO6^ENSG00000167549.18

chr17:29616776:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1158:24234:19973,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2468:39403:12981

NO_LDAS

0.0034

0.9183

1.5656

"[""INTERCHROMOSOMAL[chr7--chr17]""]"

chr7:72948528-chr17:29616776

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

NRSN2-AS1--C20orf96

2.0

0.0

ONLY_REF_SPLICE

NRSN2-AS1^ENSG00000225377.6

chr20:348100:-

C20orf96^ENSG00000196476.12

chr20:289676:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2264:1129:6241,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1398:50220:18712

YES_LDAS

0.0068

1.9899

1.8892

"[""INTRACHROMOSOMAL[chr20:0.03Mb]"",""NEIGHBORS[26082]""]"

chr20:348100-chr20:289676

True

pair|recurrent

breakpoints

Blacklisted

FAIL

MTG1--SCART1

2.0

0.0

ONLY_REF_SPLICE

MTG1^ENSG00000148824.19

chr10:133419592:+

SCART1^ENSG00000214279.13

chr10:133456237:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1301:26831:19959,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1306:50543:15489

YES_LDAS

0.0068

1.8323

1.8892

"[""INTRACHROMOSOMAL[chr10:0.03Mb]"",""NEIGHBORS[31408]""]"

chr10:133419592-chr10:133456237

True

pair|recurrent

breakpoints

Blacklisted

FAIL

MTG1--SCART1

2.0

0.0

INCL_NON_REF_SPLICE

MTG1^ENSG00000148824.19

chr10:133420175:+

SCART1^ENSG00000214279.13

chr10:133456237:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1330:32899:6591,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2288:3128:24443

YES_LDAS

0.0068

1.9329

1.8892

"[""INTRACHROMOSOMAL[chr10:0.03Mb]"",""NEIGHBORS[31408]""]"

chr10:133420175-chr10:133456237

True

pair|recurrent

breakpoints

Blacklisted

FAIL

MSRB3--SLC35E2B

2.0

0.0

ONLY_REF_SPLICE

MSRB3^ENSG00000174099.12

chr12:65305229:+

SLC35E2B^ENSG00000189339.12

chr1:1668472:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1104:39630:7600,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1251:26241:19748

YES_LDAS

0.0068

1.7232

1.9656

"[""INTERCHROMOSOMAL[chr12--chr1]""]"

chr12:65305229-chr1:1668472

False

Read

count

too

low:

FAIL

MRM3--AC243960.2

1.0

0.0

INCL_NON_REF_SPLICE

MRM3^ENSG00000171861.11

chr17:782712:+

AC243960.2^ENSG00000268034.1

chr19:41506136:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1136:50009:24288,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1291:15303:25325

YES_LDAS

0.0034

1.7819

1.8295

"[""INTERCHROMOSOMAL[chr17--chr19]""]"

chr17:782712-chr19:41506136

False

Read

count

too

low:

FAIL

MLYCD--CENPV

2.0

0.0

INCL_NON_REF_SPLICE

MLYCD^ENSG00000103150.7

chr16:83913824:+

CENPV^ENSG00000166582.10

chr17:16353668:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2279:43464:10514,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2360:27875:12854

NO_LDAS

0.0068

0.3534

1.3996

"[""INTERCHROMOSOMAL[chr16--chr17]""]"

chr16:83913824-chr17:16353668

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MIEF2--NEBL

2.0

0.0

ONLY_REF_SPLICE

MIEF2^ENSG00000177427.13

chr17:18263248:+

NEBL^ENSG00000078114.19

chr10:20812940:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1415:37559:21556,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1467:41774:12406

YES_LDAS

0.0068

1.7465

1.7232

"[""INTERCHROMOSOMAL[chr17--chr10]""]"

chr17:18263248-chr10:20812940

False

Read

count

too

low:

FAIL

MECOM--RPL22

2.0

0.0

INCL_NON_REF_SPLICE

MECOM^ENSG00000085276.19

chr3:169663336:-

RPL22^ENSG00000116251.11

chr1:6197673:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1412:13564:17352,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1164:9406:20799

NO_LDAS

0.0068

1.8062

1.9899

"[""ChimerKB"",""chimerdb_omim"",""INTERCHROMOSOMAL[chr3--chr1]""]"

chr3:169663336-chr1:6197673

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

MBD5--TANC1

2.0

0.0

ONLY_REF_SPLICE

MBD5^ENSG00000204406.14

chr2:148021684:+

TANC1^ENSG00000115183.15

chr2:159065896:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2290:49475:1869,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2135:25076:15909

YES_LDAS

0.0068

1.4716

1.6729

"[""INTRACHROMOSOMAL[chr2:10.45Mb]""]"

chr2:148021684-chr2:159065896

False

Read

count

too

low:

FAIL

MALRD1--PLXDC2

2.0

0.0

INCL_NON_REF_SPLICE

MALRD1^ENSG00000204740.11

chr10:19790186:+

PLXDC2^ENSG00000120594.17

chr10:20001775:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1311:25424:12532,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2416:31135:28086

YES_LDAS

0.0068

1.8256

1.8062

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:0.03Mb]"",""NEIGHBORS[25838]""]"

chr10:19790186-chr10:20001775

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

LARP4B--UVSSA

2.0

0.0

ONLY_REF_SPLICE

LARP4B^ENSG00000107929.15

chr10:863743:-

UVSSA^ENSG00000163945.19

chr4:1348090:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1481:3152:4335,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2303:3354:29655

YES_LDAS

0.0068

1.6402

1.8295

"[""INTERCHROMOSOMAL[chr10--chr4]""]"

chr10:863743-chr4:1348090

False

Read

count

too

low:

FAIL

IKBKB--TFRC

2.0

0.0

ONLY_REF_SPLICE

IKBKB^ENSG00000104365.16

chr8:42272205:+

TFRC^ENSG00000072274.13

chr3:196077122:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1362:22026:10851,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2246:43602:4027

YES_LDAS

0.0068

1.9329

1.5058

"[""INTERCHROMOSOMAL[chr8--chr3]""]"

chr8:42272205-chr3:196077122

False

Read

count

too

low:

FAIL

HPN-AS1--LGI4

2.0

0.0

INCL_NON_REF_SPLICE

HPN-AS1^ENSG00000227392.2

chr19:35106229:-

LGI4^ENSG00000153902.14

chr19:35132055:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1203:48763:3887,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2278:42461:4181

YES_LDAS

0.0068

1.7968

1.6402

"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr19:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[18206]""]"

chr19:35106229-chr19:35132055

False

Read

count

too

low:

FAIL

HLA-J--HLA-S

2.0

0.0

ONLY_REF_SPLICE

HLA-J^ENSG00000204622.11

chr6:30009177:+

HLA-S^ENSG00000225851.1

chr6:31382288:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1236:10287:1532,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1454:31071:17100

YES_LDAS

0.0068

1.9656

1.9329

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:1.37Mb]""]"

chr6:30009177-chr6:31382288

True

"pair|recurrent

breakpoints;

pair|MHC

complexes|HLA-S

HLA-J"

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

GRK3--NEK6

2.0

0.0

ONLY_REF_SPLICE

GRK3^ENSG00000100077.15

chr22:25678915:+

NEK6^ENSG00000119408.17

chr9:124301936:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1472:20392:19566,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1456:21799:16484

YES_LDAS

0.0068

1.9899

1.8256

"[""INTERCHROMOSOMAL[chr22--chr9]""]"

chr22:25678915-chr9:124301936

False

Read

count

too

low:

FAIL

GRIN2D--INPP4A

2.0

0.0

INCL_NON_REF_SPLICE

GRIN2D^ENSG00000105464.4

chr19:48404822:+

INPP4A^ENSG00000040933.16

chr2:98572853:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1261:17665:4167,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1381:3160:8244

YES_LDAS

0.0068

1.8892

1.5656

"[""INTERCHROMOSOMAL[chr19--chr2]""]"

chr19:48404822-chr2:98572853

False

Read

count

too

low:

FAIL

FOXO1--LINC00598

2.0

0.0

ONLY_REF_SPLICE

FOXO1^ENSG00000150907.10

chr13:40665583:-

LINC00598^ENSG00000215483.11

chr13:40474095:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2219:22447:7740,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2178:44176:7992

YES_LDAS

0.0068

1.7232

1.8295

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]"

chr13:40665583-chr13:40474095

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

FAM133B--ANKIB1

2.0

0.0

ONLY_REF_SPLICE

FAM133B^ENSG00000234545.8

chr7:92590268:-

ANKIB1^ENSG00000001629.10

chr7:92307359:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1347:4098:20799,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1359:15926:12728

YES_LDAS

0.0068

1.8295

1.7968

"[""INTRACHROMOSOMAL[chr7:0.16Mb]""]"

chr7:92590268-chr7:92307359

False

Read

count

too

low:

FAIL

EXOC5--DAB2

2.0

0.0

ONLY_REF_SPLICE

EXOC5^ENSG00000070367.16

chr14:57268622:-

DAB2^ENSG00000153071.15

chr5:39381616:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1120:29218:9435,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1217:48051:24625

YES_LDAS

0.0068

1.9086

1.9329

"[""INTERCHROMOSOMAL[chr14--chr5]""]"

chr14:57268622-chr5:39381616

False

Read

count

too

low:

FAIL

DNAJB4--MTF2

2.0

0.0

INCL_NON_REF_SPLICE

DNAJB4^ENSG00000162616.9

chr1:77979502:+

MTF2^ENSG00000143033.18

chr1:93110340:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1137:14251:15769,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2306:8265:11061

NO_LDAS

0.0068

1.5656

1.6895

"[""INTRACHROMOSOMAL[chr1:15.06Mb]""]"

chr1:77979502-chr1:93110340

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DHX16--LINC00824

2.0

0.0

ONLY_REF_SPLICE

DHX16^ENSG00000204560.10

chr6:30670410:-

LINC00824^ENSG00000254275.6

chr8:128420823:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1365:52016:15545,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1470:31548:12938

YES_LDAS

0.0068

1.8062

1.8256

"[""INTERCHROMOSOMAL[chr6--chr8]""]"

chr6:30670410-chr8:128420823

True

pair|recurrent

breakpoints

Blacklisted

FAIL

COL6A1--GDF7

2.0

0.0

INCL_NON_REF_SPLICE

COL6A1^ENSG00000142156.15

chr21:45992810:+

GDF7^ENSG00000143869.7

chr2:20674436:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1163:33676:3901,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2265:38165:27651

NO_LDAS

0.0068

1.8256

1.6729

"[""INTERCHROMOSOMAL[chr21--chr2]""]"

chr21:45992810-chr2:20674436

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

COL3A1--PYGM

2.0

0.0

INCL_NON_REF_SPLICE

COL3A1^ENSG00000168542.16

chr2:189003761:+

PYGM^ENSG00000068976.14

chr11:64758656:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2462:48229:8539,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2209:33020:12770

NO_LDAS

0.0068

1.585

1.8892

"[""INTERCHROMOSOMAL[chr2--chr11]""]"

chr2:189003761-chr11:64758656

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

COL3A1--COL22A1

2.0

0.0

ONLY_REF_SPLICE

COL3A1^ENSG00000168542.16

chr2:188988643:+

COL22A1^ENSG00000169436.17

chr8:138725440:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1261:27268:4125,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2378:36725:13919

YES_LDAS

0.0068

1.9656

1.6402

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr2--chr8]""]"

chr2:188988643-chr8:138725440

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

CHST11--MME

2.0

0.0

INCL_NON_REF_SPLICE

CHST11^ENSG00000171310.11

chr12:104601991:+

MME^ENSG00000196549.13

chr3:155183570:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1362:5191:20729,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1134:2125:20127

NO_LDAS

0.0068

1.7056

1.9656

"[""INTERCHROMOSOMAL[chr12--chr3]""]"

chr12:104601991-chr3:155183570

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

CCSAP--LINC02814

2.0

0.0

ONLY_REF_SPLICE

CCSAP^ENSG00000154429.11

chr1:229342099:-

LINC02814^ENSG00000236975.2

chr1:229197804:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1226:25569:7740,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2348:51004:9814

YES_LDAS

0.0068

1.8323

1.8892

"[""INTRACHROMOSOMAL[chr1:0.12Mb]""]"

chr1:229342099-chr1:229197804

False

Read

count

too

low:

FAIL

CCDC78--ZSCAN29

0.67

0.0

INCL_NON_REF_SPLICE

CCDC78^ENSG00000162004.18

chr16:725560:-

ZSCAN29^ENSG00000140265.12

chr15:43371007:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1235:12868:5358,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1270:9907:14130

NO_LDAS

0.0023

1.6402

1.231

"[""INTERCHROMOSOMAL[chr16--chr15]""]"

chr16:725560-chr15:43371007

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CCDC30--NUP85

2.0

0.0

ONLY_REF_SPLICE

CCDC30^ENSG00000186409.18

chr1:42521256:+

NUP85^ENSG00000125450.11

chr17:75231340:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1243:43133:4587,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1121:17091:5106

YES_LDAS

0.0068

1.8892

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:42521256-chr17:75231340

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

CATIP-AS2--KBTBD11

2.0

0.0

INCL_NON_REF_SPLICE

CATIP-AS2^ENSG00000237281.1

chr2:218327847:-

KBTBD11^ENSG00000176595.4

chr8:2001418:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1487:23862:8455,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1262:33182:10136

YES_LDAS

0.0068

1.8892

1.6402

"[""INTERCHROMOSOMAL[chr2--chr8]""]"

chr2:218327847-chr8:2001418

False

Read

count

too

low:

FAIL

BTBD10--PARVA

2.0

0.0

ONLY_REF_SPLICE

BTBD10^ENSG00000148925.11

chr11:13463092:-

PARVA^ENSG00000197702.14

chr11:12473745:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1197:37017:28240,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1120:30051:3452

YES_LDAS

0.0068

1.9656

1.8892

"[""INTRACHROMOSOMAL[chr11:0.85Mb]""]"

chr11:13463092-chr11:12473745

False

Read

count

too

low:

FAIL

ATAD3B--AC124947.1

2.0

0.0

ONLY_REF_SPLICE

ATAD3B^ENSG00000160072.20

chr1:1477350:+

AC124947.1^ENSG00000257252.6

chr12:93339736:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2234:22398:23069,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2371:40026:11761

NO_LDAS

0.0068

1.8323

1.8295

"[""INTERCHROMOSOMAL[chr1--chr12]""]"

chr1:1477350-chr12:93339736

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ANO10--ZNF546

2.0

0.0

ONLY_REF_SPLICE

ANO10^ENSG00000160746.13

chr3:43652947:-

ZNF546^ENSG00000187187.14

chr19:40006096:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1307:19348:28016,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2431:48618:17647

YES_LDAS

0.0068

1.8892

1.5656

"[""INTERCHROMOSOMAL[chr3--chr19]""]"

chr3:43652947-chr19:40006096

False

Read

count

too

low:

FAIL

ALOX5--WASHC2C

1.0

0.0

ONLY_REF_SPLICE

ALOX5^ENSG00000012779.11

chr10:45428764:+

WASHC2C^ENSG00000172661.19

chr10:45763388:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1339:19906:13905,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1137:1348:1743

YES_LDAS

0.0034

1.8295

1.4256

"[""INTRACHROMOSOMAL[chr10:0.28Mb]""]"

chr10:45428764-chr10:45763388

False

Read

count

too

low:

FAIL

ALOX5--FAM21FP

1.0

0.0

ONLY_REF_SPLICE

ALOX5^ENSG00000012779.11

chr10:45428764:+

FAM21FP^ENSG00000237840.6

chr10:45708867:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1339:19906:13905,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1137:1348:1743

YES_LDAS

0.0034

1.8295

1.4256

"[""INTRACHROMOSOMAL[chr10:0.26Mb]""]"

chr10:45428764-chr10:45708867

False

Read

count

too

low:

FAIL

ALG12--SYNRG

2.0

0.0

INCL_NON_REF_SPLICE

ALG12^ENSG00000182858.14

chr22:49903481:-

SYNRG^ENSG00000275066.5

chr17:37542156:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2282:7432:24919,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1126:50891:6030

NO_LDAS

0.0068

1.8892

1.8323

"[""INTERCHROMOSOMAL[chr22--chr17]""]"

chr22:49903481-chr17:37542156

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL645929.2--AC067930.1

2.0

0.0

INCL_NON_REF_SPLICE

AL645929.2^ENSG00000285799.1

chr6:29857361:-

AC067930.1^ENSG00000254741.1

chr8:143580508:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2337:6801:26292,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1361:25618:18557

NO_LDAS

0.0068

1.5656

1.9656

"[""INTERCHROMOSOMAL[chr6--chr8]""]"

chr6:29857361-chr8:143580508

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

AL050403.2--SLX4IP

2.0

0.0

ONLY_REF_SPLICE

AL050403.2^ENSG00000270792.6

chr20:10673025:+

SLX4IP^ENSG00000149346.15

chr20:10556231:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1232:12253:13961,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1296:37785:16119

YES_LDAS

0.0068

1.3383

1.6895

"[""INTRACHROMOSOMAL[chr20:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[35866]""]"

chr20:10673025-chr20:10556231

False

Read

count

too

low:

FAIL

ACACA--NIN

1.0

0.0

INCL_NON_REF_SPLICE

ACACA^ENSG00000278540.5

chr17:37087242:-

NIN^ENSG00000100503.26

chr14:50760318:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1198:2634:20449,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2215:43319:19959

NO_LDAS

0.0034

1.7819

1.8062

"[""INTERCHROMOSOMAL[chr17--chr14]""]"

chr17:37087242-chr14:50760318

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC145124.1--AC092745.5

2.0

0.0

INCL_NON_REF_SPLICE

AC145124.1^ENSG00000255495.1

chr8:12198796:+

AC092745.5^ENSG00000286895.1

chr12:8251369:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1170:49710:28198,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2285:33716:18768

NO_LDAS

0.0068

1.9219

1.8892

"[""INTERCHROMOSOMAL[chr8--chr12]""]"

chr8:12198796-chr12:8251369

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC138409.2--NAIP

0.11

0.0

ONLY_REF_SPLICE

AC138409.2^ENSG00000215158.9

chr5:34175822:-

NAIP^ENSG00000249437.8

chr5:71003857:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1148:33627:11775,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1407:38222:1350

YES_LDAS

0.0004

1.9329

1.8295

"[""INTRACHROMOSOMAL[chr5:36.72Mb]""]"

chr5:34175822-chr5:71003857

False

Read

count

too

low:

FAIL

AC124944.2--AC132008.2

0.67

0.0

ONLY_REF_SPLICE

AC124944.2^ENSG00000260261.2

chr3:195953349:-

AC132008.2^ENSG00000214135.8

chr3:197624197:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1312:44977:20449,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1388:44095:26460

YES_LDAS

0.0023

1.9656

"[""INTRACHROMOSOMAL[chr3:1.62Mb]""]"

chr3:195953349-chr3:197624197

False

Read

count

too

low:

FAIL

AC104041.1--APBA1

1.0

0.0

ONLY_REF_SPLICE

AC104041.1^ENSG00000259692.6

chr15:81870928:-

APBA1^ENSG00000107282.8

chr9:69476143:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1146:7221:13597,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2303:40398:7474

YES_LDAS

0.0034

1.9656

1.5058

"[""INTERCHROMOSOMAL[chr15--chr9]""]"

chr15:81870928-chr9:69476143

False

Read

count

too

low:

FAIL

AC103702.2--HOXB7

2.0

0.0

INCL_NON_REF_SPLICE

AC103702.2^ENSG00000272763.1

chr17:48636629:-

HOXB7^ENSG00000260027.5

chr17:48608095:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1302:3920:6563,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1332:3378:11761

YES_LDAS

0.0068

1.6895

1.7819

"[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""NEIGHBORS[2351]""]"

chr17:48636629-chr17:48608095

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AC097493.3--LINC00882

2.0

0.0

INCL_NON_REF_SPLICE

AC097493.3^ENSG00000284648.1

chr4:9532651:+

LINC00882^ENSG00000242759.8

chr3:106926285:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1244:27123:12868,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1480:22430:12560

YES_LDAS

0.0068

1.7056

"[""INTERCHROMOSOMAL[chr4--chr3]""]"

chr4:9532651-chr3:106926285

False

Read

count

too

low:

FAIL

AC068587.4--ENPP7P11

0.4

0.0

INCL_NON_REF_SPLICE

AC068587.4^ENSG00000283674.3

chr8:12601158:-

ENPP7P11^ENSG00000250942.1

chr4:9677311:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1427:50114:15335,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1243:14510:3354

YES_LDAS

0.0014

1.3996

1.5219

"[""INTERCHROMOSOMAL[chr8--chr4]""]"

chr8:12601158-chr4:9677311

False

Read

count

too

low:

FAIL

AC025171.3--UBE2Q2P2

2.0

0.0

ONLY_REF_SPLICE

AC025171.3^ENSG00000251131.2

chr5:43018672:+

UBE2Q2P2^ENSG00000259429.5

chr15:82419980:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1495:14065:19734,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1257:20287:3214

YES_LDAS

0.0068

1.9656

1.8892

"[""INTERCHROMOSOMAL[chr5--chr15]""]"

chr5:43018672-chr15:82419980

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AC020550.2--APBA1

1.0

0.0

ONLY_REF_SPLICE

AC020550.2^ENSG00000287858.1

chr2:197640501:+

APBA1^ENSG00000107282.8

chr9:69476143:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1146:7221:13597,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2303:40398:7474

YES_LDAS

0.0034

1.9656

1.5058

"[""INTERCHROMOSOMAL[chr2--chr9]""]"

chr2:197640501-chr9:69476143

False

Read

count

too

low:

FAIL

AC008740.1--CRYM-AS1

2.0

0.0

ONLY_REF_SPLICE

AC008740.1^ENSG00000257403.2

chr16:21352138:+

CRYM-AS1^ENSG00000189149.12

chr16:21315884:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2151:11735:10711,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2214:25173:29473

YES_LDAS

0.0068

1.7232

1.8892

"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]"

chr16:21352138-chr16:21315884

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

ABCC3--GBF1

2.0

0.0

INCL_NON_REF_SPLICE

ABCC3^ENSG00000108846.16

chr17:50669528:+

GBF1^ENSG00000107862.6

chr10:102256702:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1180:12917:22593,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1124:16387:15349

YES_LDAS

0.0068

1.4295

1.7819

"[""INTERCHROMOSOMAL[chr17--chr10]""]"

chr17:50669528-chr10:102256702

False

Read

count

too

low:

FAIL

VTI1A--AL158212.1

2.0

1.0

ONLY_REF_SPLICE

VTI1A^ENSG00000151532.14

chr10:112668998:+

AL158212.1^ENSG00000225292.2

chr10:112888735:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2119:11032:12490,&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1470:19850:27119

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1163:1874:28969

YES_LDAS

0.0102

1.7465

1.8892

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:0.07Mb]"",""NEIGHBORS[69991]""]"

chr10:112668998-chr10:112888735

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

ZZZ3--GLIPR2

1.0

0.0

ONLY_REF_SPLICE

ZZZ3^ENSG00000036549.13

chr1:77683262:-

GLIPR2^ENSG00000122694.16

chr9:36162362:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1130:40261:9954

YES_LDAS

0.0034

1.8256

1.8892

"[""INTERCHROMOSOMAL[chr1--chr9]""]"

chr1:77683262-chr9:36162362

False

Read

count

too

low:

FAIL

ZSWIM3--ATG4B

1.0

0.0

ONLY_REF_SPLICE

ZSWIM3^ENSG00000132801.7

chr20:45857980:+

ATG4B^ENSG00000168397.17

chr2:241654546:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1357:48877:8623

YES_LDAS

0.0034

1.8892

"[""INTERCHROMOSOMAL[chr20--chr2]""]"

chr20:45857980-chr2:241654546

False

Read

count

too

low:

FAIL

ZNRF2P1--KBTBD2

1.0

0.0

ONLY_REF_SPLICE

ZNRF2P1^ENSG00000237004.4

chr7:32729009:+

KBTBD2^ENSG00000170852.11

chr7:32879942:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1107:23482:9169

YES_LDAS

0.0034

1.8892

1.9329

"[""INTRACHROMOSOMAL[chr7:0.11Mb]""]"

chr7:32729009-chr7:32879942

False

Read

count

too

low:

FAIL

ZNRF2P1--AC004528.2

1.0

0.0

INCL_NON_REF_SPLICE

ZNRF2P1^ENSG00000237004.4

chr7:32728809:+

AC004528.2^ENSG00000274177.1

chr19:1010533:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1480:50826:7516

NO_LDAS

0.0034

1.3383

1.6895

"[""INTERCHROMOSOMAL[chr7--chr19]""]"

chr7:32728809-chr19:1010533

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZNF891--KIAA1841

1.0

0.0

INCL_NON_REF_SPLICE

ZNF891^ENSG00000214029.6

chr12:133110910:-

KIAA1841^ENSG00000162929.14

chr2:61089622:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2266:49087:3943

YES_LDAS

0.0034

1.9656

1.7819

"[""INTERCHROMOSOMAL[chr12--chr2]""]"

chr12:133110910-chr2:61089622

False

Read

count

too

low:

FAIL

ZNF879--FOCAD

1.0

0.0

ONLY_REF_SPLICE

ZNF879^ENSG00000234284.7

chr5:179025037:+

FOCAD^ENSG00000188352.12

chr9:20993253:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1448:31443:15979

YES_LDAS

0.0034

1.8892

1.9219

"[""INTERCHROMOSOMAL[chr5--chr9]""]"

chr5:179025037-chr9:20993253

False

Read

count

too

low:

FAIL

ZNF831--RNF19A

1.0

0.0

ONLY_REF_SPLICE

ZNF831^ENSG00000124203.6

chr20:59207056:+

RNF19A^ENSG00000034677.13

chr8:100288267:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1161:42065:9267

YES_LDAS

0.0034

1.9219

1.8892

"[""INTERCHROMOSOMAL[chr20--chr8]""]"

chr20:59207056-chr8:100288267

False

Read

count

too

low:

FAIL

ZNF814--PCDH15

1.0

0.0

INCL_NON_REF_SPLICE

ZNF814^ENSG00000204514.10

chr19:57873565:-

PCDH15^ENSG00000150275.19

chr10:54801226:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2147:32074:15615

NO_LDAS

0.0034

1.5656

1.7968

"[""INTERCHROMOSOMAL[chr19--chr10]""]"

chr19:57873565-chr10:54801226

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZNF775--AC073111.3

1.0

0.0

ONLY_REF_SPLICE

ZNF775^ENSG00000196456.13

chr7:150388501:+

AC073111.3^ENSG00000284691.1

chr7:150407584:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2273:32640:27105

YES_LDAS

0.0034

1.8256

1.8892

"[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[2072]""]"

chr7:150388501-chr7:150407584

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ZNF767P--SNX25

1.0

0.0

ONLY_REF_SPLICE

ZNF767P^ENSG00000133624.13

chr7:149619924:-

SNX25^ENSG00000109762.16

chr4:185247294:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1443:34857:21080

NO_LDAS

0.0034

1.8892

1.9086

"[""INTERCHROMOSOMAL[chr7--chr4]""]"

chr7:149619924-chr4:185247294

False

Read

count

too

low:

FAIL

ZNF766--ZNF845

0.5

0.0

ONLY_REF_SPLICE

ZNF766^ENSG00000196214.11

chr19:52269631:+

ZNF845^ENSG00000213799.13

chr19:53341235:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2389:36863:17689

NO_LDAS

0.0017

1.7056

1.9086

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:1.04Mb]""]"

chr19:52269631-chr19:53341235

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ZNF75D--CHM

1.0

0.0

INCL_NON_REF_SPLICE

ZNF75D^ENSG00000186376.15

chrX:135341768:-

CHM^ENSG00000188419.14

chrX:85963972:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2215:13216:15853

YES_LDAS

0.0034

1.8062

1.9899

"[""INTRACHROMOSOMAL[chrX:49.20Mb]""]"

chrX:135341768-chrX:85963972

False

Read

count

too

low:

FAIL

ZNF749--AC003005.2

1.0

0.0

INCL_NON_REF_SPLICE

ZNF749^ENSG00000186230.7

chr19:57435593:+

AC003005.2^ENSG00000268266.1

chr19:57481905:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1273:41927:18081

YES_LDAS

0.0034

1.9329

1.7968

"[""INTRACHROMOSOMAL[chr19:0.03Mb]"",""NEIGHBORS[30548]""]"

chr19:57435593-chr19:57481905

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ZNF738--NDUFV2

1.0

0.0

ONLY_REF_SPLICE

ZNF738^ENSG00000172687.13

chr19:21375964:+

NDUFV2^ENSG00000178127.13

chr18:9124874:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2228:42575:14886

YES_LDAS

0.0034

1.6402

1.5058

"[""INTERCHROMOSOMAL[chr19--chr18]""]"

chr19:21375964-chr18:9124874

False

Read

count

too

low:

FAIL

ZNF720--CLUHP3

1.0

0.0

INCL_NON_REF_SPLICE

ZNF720^ENSG00000197302.10

chr16:31723353:+

CLUHP3^ENSG00000131797.12

chr16:31700662:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2464:39484:13793

YES_LDAS

0.0034

1.8892

1.4295

"[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1243]""]"

chr16:31723353-chr16:31700662

False

Read

count

too

low:

FAIL

ZNF706--MTCH2

1.0

0.0

ONLY_REF_SPLICE

ZNF706^ENSG00000120963.12

chr8:101205435:-

MTCH2^ENSG00000109919.10

chr11:47625741:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2174:15878:21836

YES_LDAS

0.0034

1.6895

1.6402

"[""INTERCHROMOSOMAL[chr8--chr11]""]"

chr8:101205435-chr11:47625741

False

Read

count

too

low:

FAIL

ZNF665--FAM76A

1.0

0.0

ONLY_REF_SPLICE

ZNF665^ENSG00000197497.11

chr19:53191719:-

FAM76A^ENSG00000009780.16

chr1:27732603:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1324:23296:8735

NO_LDAS

0.0034

1.9329

1.371

"[""INTERCHROMOSOMAL[chr19--chr1]""]"

chr19:53191719-chr1:27732603

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

ZNF655--LEMD2

1.0

0.0

ONLY_REF_SPLICE

ZNF655^ENSG00000197343.11

chr7:99571792:+

LEMD2^ENSG00000161904.12

chr6:33786774:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1342:3823:8272

YES_LDAS

0.0034

1.9656

1.9329

"[""INTERCHROMOSOMAL[chr7--chr6]""]"

chr7:99571792-chr6:33786774

False

Read

count

too

low:

FAIL

ZNF592--THAP6

1.0

0.0

ONLY_REF_SPLICE

ZNF592^ENSG00000166716.10

chr15:84764815:+

THAP6^ENSG00000174796.12

chr4:75549605:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2482:10757:23952

NO_LDAS

0.0034

1.9899

1.8892

"[""INTERCHROMOSOMAL[chr15--chr4]""]"

chr15:84764815-chr4:75549605

False

Read

count

too

low:

FAIL

ZNF592--C1GALT1

1.0

0.0

ONLY_REF_SPLICE

ZNF592^ENSG00000166716.10

chr15:84748664:+

C1GALT1^ENSG00000106392.11

chr7:7210446:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1307:45552:9113

NO_LDAS

0.0034

1.231

1.7819

"[""INTERCHROMOSOMAL[chr15--chr7]""]"

chr15:84748664-chr7:7210446

False

Read

count

too

low:

FAIL

ZNF587B--ZNF417

0.5

0.0

ONLY_REF_SPLICE

ZNF587B^ENSG00000269343.9

chr19:57820549:+

ZNF417^ENSG00000173480.11

chr19:57912186:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1353:44322:19987

YES_LDAS

0.0017

1.8323

1.9329

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.05Mb]"",""LOCAL_INVERSION:+:-:[54058]""]"

chr19:57820549-chr19:57912186

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ZNF587B--ZNF417

0.5

0.0

ONLY_REF_SPLICE

ZNF587B^ENSG00000269343.9

chr19:57819945:+

ZNF417^ENSG00000173480.11

chr19:57912186:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1185:51287:8062

YES_LDAS

0.0017

1.8892

1.9329

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.05Mb]"",""LOCAL_INVERSION:+:-:[54058]""]"

chr19:57819945-chr19:57912186

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ZNF587B--ZNF154

1.0

0.0

ONLY_REF_SPLICE

ZNF587B^ENSG00000269343.9

chr19:57820549:+

ZNF154^ENSG00000179909.15

chr19:57704979:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1379:45665:11327

YES_LDAS

0.0034

1.8323

1.9329

"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr19:0.11Mb]""]"

chr19:57820549-chr19:57704979

False

Excluded

annotation

pattern:

DGD_PARALOGS

FAIL

ZNF586--ZNF587B

1.0

0.0

ONLY_REF_SPLICE

ZNF586^ENSG00000083828.16

chr19:57776669:+

ZNF587B^ENSG00000269343.9

chr19:57840838:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2120:27673:19734

YES_LDAS

0.0034

1.8323

1.2729

"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr19:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[218]""]"

chr19:57776669-chr19:57840838

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ZNF552--PKNOX1

0.33

0.0

INCL_NON_REF_SPLICE

ZNF552^ENSG00000178935.5

chr19:57809033:-

PKNOX1^ENSG00000160199.15

chr21:43004326:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2417:44298:11145

YES_LDAS

0.0011

1.7465

1.7819

"[""INTERCHROMOSOMAL[chr19--chr21]""]"

chr19:57809033-chr21:43004326

False

Read

count

too

low:

FAIL

ZNF544--ZNF844

0.5

0.0

ONLY_REF_SPLICE

ZNF544^ENSG00000198131.14

chr19:58244056:+

ZNF844^ENSG00000223547.10

chr19:12074031:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1459:10360:8693

YES_LDAS

0.0017

1.8295

1.7819

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:46.15Mb]""]"

chr19:58244056-chr19:12074031

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ZNF544--ZNF589

0.5

0.0

ONLY_REF_SPLICE

ZNF544^ENSG00000198131.14

chr19:58244056:+

ZNF589^ENSG00000164048.14

chr3:48260813:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1459:10360:8693

YES_LDAS

0.0017

1.8295

1.9899

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr3]""]"

chr19:58244056-chr3:48260813

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ZNF518A--RBM15

0.5

0.0

INCL_NON_REF_SPLICE

ZNF518A^ENSG00000177853.14

chr10:96130741:+

RBM15^ENSG00000162775.17

chr1:110341529:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2148:29922:13373

NO_LDAS

0.0017

1.8323

1.9086

"[""INTERCHROMOSOMAL[chr10--chr1]""]"

chr10:96130741-chr1:110341529

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZNF513--AL590103.1

1.0

0.0

INCL_NON_REF_SPLICE

ZNF513^ENSG00000163795.14

chr2:27380421:-

AL590103.1^ENSG00000231978.2

chr1:21768434:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1486:24234:6465

NO_LDAS

0.0034

1.5546

1.8256

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:27380421-chr1:21768434

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZNF461--B3GNTL1

1.0

0.0

ONLY_REF_SPLICE

ZNF461^ENSG00000197808.12

chr19:36656448:-

B3GNTL1^ENSG00000175711.8

chr17:83048785:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1268:13224:4685

YES_LDAS

0.0034

1.8892

1.5219

"[""INTERCHROMOSOMAL[chr19--chr17]""]"

chr19:36656448-chr17:83048785

False

Read

count

too

low:

FAIL

ZNF439--BRPF3

1.0

0.0

INCL_NON_REF_SPLICE

ZNF439^ENSG00000171291.8

chr19:11848949:+

BRPF3^ENSG00000096070.19

chr6:36231250:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1205:37882:12168

NO_LDAS

0.0034

1.6729

1.8256

"[""INTERCHROMOSOMAL[chr19--chr6]""]"

chr19:11848949-chr6:36231250

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZNF431--AC092687.2

1.0

0.0

ONLY_REF_SPLICE

ZNF431^ENSG00000196705.8

chr19:21143643:+

AC092687.2^ENSG00000236162.1

chr2:10719035:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2305:21694:16778

NO_LDAS

0.0034

1.6895

1.9219

"[""INTERCHROMOSOMAL[chr19--chr2]""]"

chr19:21143643-chr2:10719035

False

Read

count

too

low:

FAIL

ZNF41--ZNF175

1.0

0.0

ONLY_REF_SPLICE

ZNF41^ENSG00000147124.12

chrX:47455921:-

ZNF175^ENSG00000105497.8

chr19:51581391:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2435:21767:15755

YES_LDAS

0.0034

1.9899

1.9219

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chrX--chr19]""]"

chrX:47455921-chr19:51581391

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ZNF398--AC007225.1

0.5

0.0

INCL_NON_REF_SPLICE

ZNF398^ENSG00000197024.9

chr7:149154317:+

AC007225.1^ENSG00000260782.1

chr16:46790523:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1312:45964:9772

NO_LDAS

0.0017

1.7465

1.9656

"[""INTERCHROMOSOMAL[chr7--chr16]""]"

chr7:149154317-chr16:46790523

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZNF385A--AC025164.2

1.0

0.0

INCL_NON_REF_SPLICE

ZNF385A^ENSG00000161642.18

chr12:54373973:-

AC025164.2^ENSG00000287714.1

chr12:92027026:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1180:46409:21640

NO_LDAS

0.0034

1.8295

"[""INTRACHROMOSOMAL[chr12:37.64Mb]""]"

chr12:54373973-chr12:92027026

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZNF33A--ZNF124

0.2

0.0

INCL_NON_REF_SPLICE

ZNF33A^ENSG00000189180.16

chr10:38055955:+

ZNF124^ENSG00000196418.12

chr1:247159813:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1141:1849:26769

NO_LDAS

0.0007

1.8295

1.8892

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr10--chr1]""]"

chr10:38055955-chr1:247159813

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ZNF296--GEMIN7

1.0

0.0

INCL_NON_REF_SPLICE

ZNF296^ENSG00000170684.9

chr19:45075713:-

GEMIN7^ENSG00000142252.11

chr19:45090346:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1317:43820:5414

YES_LDAS

0.0034

1.6895

1.9086

"[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_INVERSION:-:+:[2608]""]"

chr19:45075713-chr19:45090346

False

Read

count

too

low:

FAIL

ZNF276--CES3

1.0

0.0

INCL_NON_REF_SPLICE

ZNF276^ENSG00000158805.12

chr16:89738725:+

CES3^ENSG00000172828.13

chr16:66963552:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1336:51886:1785

YES_LDAS

0.0034

1.5329

1.6895

"[""INTRACHROMOSOMAL[chr16:22.75Mb]""]"

chr16:89738725-chr16:66963552

False

Read

count

too

low:

FAIL

ZNF274--UPB1

1.0

0.0

INCL_NON_REF_SPLICE

ZNF274^ENSG00000171606.18

chr19:58209713:+

UPB1^ENSG00000100024.15

chr22:24494953:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1143:2181:11509

NO_LDAS

0.0034

1.9086

1.6402

"[""INTERCHROMOSOMAL[chr19--chr22]""]"

chr19:58209713-chr22:24494953

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZNF236--MBP

1.0

0.0

ONLY_REF_SPLICE

ZNF236^ENSG00000130856.17

chr18:76822662:+

MBP^ENSG00000197971.16

chr18:77066385:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2486:1574:21556

YES_LDAS

0.0034

1.5628

1.7232

"[""INTRACHROMOSOMAL[chr18:0.01Mb]"",""LOCAL_INVERSION:+:-:[5926]""]"

chr18:76822662-chr18:77066385

False

Read

count

too

low:

FAIL

ZNF17--CSAD

1.0

0.0

INCL_NON_REF_SPLICE

ZNF17^ENSG00000186272.13

chr19:57411627:+

CSAD^ENSG00000139631.19

chr12:53180051:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2450:2578:13065

YES_LDAS

0.0034

1.6895

1.8062

"[""INTERCHROMOSOMAL[chr19--chr12]""]"

chr19:57411627-chr12:53180051

False

Read

count

too

low:

FAIL

ZNF124--FLCN

1.0

0.0

INCL_NON_REF_SPLICE

ZNF124^ENSG00000196418.12

chr1:247159006:-

FLCN^ENSG00000154803.13

chr17:17212617:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2101:48610:14242

YES_LDAS

0.0034

1.7968

1.9656

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:247159006-chr17:17212617

False

Read

count

too

low:

FAIL

ZNF121--ZNF124

0.2

0.0

INCL_NON_REF_SPLICE

ZNF121^ENSG00000197961.12

chr19:9566593:-

ZNF124^ENSG00000196418.12

chr1:247159813:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1141:1849:26769

NO_LDAS

0.0007

1.8295

1.8892

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr1]""]"

chr19:9566593-chr1:247159813

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ZMYND11--RASGRP1

0.5

0.0

INCL_NON_REF_SPLICE

ZMYND11^ENSG00000015171.20

chr10:135537:+

RASGRP1^ENSG00000172575.12

chr15:38564715:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1103:14017:18950

NO_LDAS

0.0017

0.9183

1.2729

"[""INTERCHROMOSOMAL[chr10--chr15]""]"

chr10:135537-chr15:38564715

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZMYM3--CTXN2

1.0

0.0

INCL_NON_REF_SPLICE

ZMYM3^ENSG00000147130.14

chrX:71241227:-

CTXN2^ENSG00000233932.6

chr15:48178514:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1438:49055:9155

NO_LDAS

0.0034

1.8256

1.8295

"[""INTERCHROMOSOMAL[chrX--chr15]""]"

chrX:71241227-chr15:48178514

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZFP14--AC005498.3

1.0

0.0

ONLY_REF_SPLICE

ZFP14^ENSG00000142065.14

chr19:36360435:-

AC005498.3^ENSG00000269696.2

chr19:56547271:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2347:17091:5666

YES_LDAS

0.0034

1.9899

1.7819

"[""INTRACHROMOSOMAL[chr19:20.17Mb]""]"

chr19:36360435-chr19:56547271

False

Read

count

too

low:

FAIL

ZEB1--ARID5B

1.0

0.0

ONLY_REF_SPLICE

ZEB1^ENSG00000148516.22

chr10:31319292:+

ARID5B^ENSG00000150347.17

chr10:61940183:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1332:33417:8749

YES_LDAS

0.0034

1.8256

1.9329

"[""INTRACHROMOSOMAL[chr10:30.37Mb]""]"

chr10:31319292-chr10:61940183

False

Read

count

too

low:

FAIL

ZDHHC20--ZMYM2

1.0

0.0

ONLY_REF_SPLICE

ZDHHC20^ENSG00000180776.16

chr13:21459054:-

ZMYM2^ENSG00000121741.17

chr13:19959958:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2115:28830:21738

YES_LDAS

0.0034

1.7819

1.9086

"[""INTRACHROMOSOMAL[chr13:1.28Mb]""]"

chr13:21459054-chr13:19959958

False

Read

count

too

low:

FAIL

ZDHHC14--SNX9

1.0

0.0

ONLY_REF_SPLICE

ZDHHC14^ENSG00000175048.17

chr6:157593146:+

SNX9^ENSG00000130340.17

chr6:157766385:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1445:25950:20141

YES_LDAS

0.0034

1.9329

1.9086

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.02Mb]"",""NEIGHBORS[22230]""]"

chr6:157593146-chr6:157766385

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ZDHHC14--NPIPB11

0.17

0.0

INCL_NON_REF_SPLICE

ZDHHC14^ENSG00000175048.17

chr6:157673788:+

NPIPB11^ENSG00000254206.5

chr16:29381699:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1456:8597:6058

NO_LDAS

0.0006

1.5546

1.231

"[""INTERCHROMOSOMAL[chr6--chr16]""]"

chr6:157673788-chr16:29381699

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZDHHC14--C15orf40

1.0

0.0

INCL_NON_REF_SPLICE

ZDHHC14^ENSG00000175048.17

chr6:157673118:+

C15orf40^ENSG00000169609.14

chr15:83000694:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1292:12779:17142

NO_LDAS

0.0034

1.9656

1.6402

"[""INTERCHROMOSOMAL[chr6--chr15]""]"

chr6:157673118-chr15:83000694

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZCCHC14--AL360182.1

1.0

0.0

INCL_NON_REF_SPLICE

ZCCHC14^ENSG00000140948.13

chr16:87491667:-

AL360182.1^ENSG00000214067.2

chr10:110257659:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1488:2133:2850

NO_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr16--chr10]""]"

chr16:87491667-chr10:110257659

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ZC3H15--LRRC7-AS1

1.0

0.0

INCL_NON_REF_SPLICE

ZC3H15^ENSG00000065548.18

chr2:186504144:+

LRRC7-AS1^ENSG00000237919.5

chr1:70020884:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1123:46522:14186

YES_LDAS

0.0034

1.7465

0.5665

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:186504144-chr1:70020884

False

Read

count

too

low:

FAIL

ZBTB45--KRBA1

1.0

0.0

INCL_NON_REF_SPLICE

ZBTB45^ENSG00000119574.13

chr19:58513856:-

KRBA1^ENSG00000133619.17

chr7:149730259:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2174:32624:23434

YES_LDAS

0.0034

1.8892

1.5546

"[""INTERCHROMOSOMAL[chr19--chr7]""]"

chr19:58513856-chr7:149730259

False

Read

count

too

low:

FAIL

ZBED3-AS1--PDE8B

1.0

0.0

ONLY_REF_SPLICE

ZBED3-AS1^ENSG00000250802.7

chr5:77118521:+

PDE8B^ENSG00000113231.14

chr5:77311994:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1176:17172:16512

YES_LDAS

0.0034

1.9329

1.8256

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[43540]""]"

chr5:77118521-chr5:77311994

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

Z95118.1--RPL37A

1.0

0.0

INCL_NON_REF_SPLICE

Z95118.1^ENSG00000231559.1

chr6:108817819:+

RPL37A^ENSG00000197756.10

chr2:216499963:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1398:42995:29515

YES_LDAS

0.0034

1.6402

1.8295

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:108817819-chr2:216499963

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

Z94721.1--RPS6KA2

1.0

0.0

ONLY_REF_SPLICE

Z94721.1^ENSG00000227598.1

chr6:166998918:-

RPS6KA2^ENSG00000071242.12

chr6:166858259:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1373:2529:21752

YES_LDAS

0.0034

1.5329

1.7819

"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr6:0.06Mb]"",""NEIGHBORS[63175]""]"

chr6:166998918-chr6:166858259

False

Read

count

too

low:

FAIL

Z82198.1--TVP23C

1.0

0.0

INCL_NON_REF_SPLICE

Z82198.1^ENSG00000228622.1

chr22:33105513:-

TVP23C^ENSG00000175106.17

chr17:15502829:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1320:1769:8553

NO_LDAS

0.0034

1.9086

0.9968

"[""INTERCHROMOSOMAL[chr22--chr17]""]"

chr22:33105513-chr17:15502829

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

Z68871.1--LINC00630

1.0

0.0

INCL_NON_REF_SPLICE

Z68871.1^ENSG00000239407.5

chrX:102905737:+

LINC00630^ENSG00000223546.7

chrX:102865042:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1229:6178:5400

NO_LDAS

0.0034

1.7465

1.8892

"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chrX:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[992]""]"

chrX:102905737-chrX:102865042

True

pair|recurrent

breakpoints

Blacklisted

FAIL

Z68871.1--LINC00630

1.0

0.0

INCL_NON_REF_SPLICE

Z68871.1^ENSG00000239407.5

chrX:102905737:+

LINC00630^ENSG00000223546.7

chrX:102839801:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1282:46992:12588

NO_LDAS

0.0034

1.7465

1.5058

"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chrX:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[992]""]"

chrX:102905737-chrX:102839801

True

pair|recurrent

breakpoints

Blacklisted

FAIL

YWHAQP5--PINK1-AS

0.5

0.0

INCL_NON_REF_SPLICE

YWHAQP5^ENSG00000236564.1

chr2:98694617:+

PINK1-AS^ENSG00000117242.7

chr1:20642890:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2424:24760:20435

NO_LDAS

0.0017

1.9329

1.8323

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:98694617-chr1:20642890

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

YWHAQP5--GPATCH1

0.5

0.0

INCL_NON_REF_SPLICE

YWHAQP5^ENSG00000236564.1

chr2:98694617:+

GPATCH1^ENSG00000076650.7

chr19:33113072:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2424:24760:20435

NO_LDAS

0.0017

1.9329

1.8323

"[""INTERCHROMOSOMAL[chr2--chr19]""]"

chr2:98694617-chr19:33113072

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

YIPF4--HNRNPLL

1.0

0.0

ONLY_REF_SPLICE

YIPF4^ENSG00000119820.11

chr2:32278234:+

HNRNPLL^ENSG00000143889.16

chr2:38591648:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2174:31062:18375

YES_LDAS

0.0034

1.5656

1.6402

"[""INTRACHROMOSOMAL[chr2:6.25Mb]""]"

chr2:32278234-chr2:38591648

False

Read

count

too

low:

FAIL

YAF2--RYBP

1.0

0.0

INCL_NON_REF_SPLICE

YAF2^ENSG00000015153.15

chr12:42238155:-

RYBP^ENSG00000163602.11

chr3:72446621:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1173:23984:18333

YES_LDAS

0.0034

1.5656

1.4566

"[""INTERCHROMOSOMAL[chr12--chr3]""]"

chr12:42238155-chr3:72446621

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

XRRA1--MTCH2

1.0

0.0

ONLY_REF_SPLICE

XRRA1^ENSG00000166435.15

chr11:74848115:-

MTCH2^ENSG00000109919.10

chr11:47634734:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1110:25432:20309

YES_LDAS

0.0034

1.8892

"[""INTRACHROMOSOMAL[chr11:27.17Mb]""]"

chr11:74848115-chr11:47634734

False

Read

count

too

low:

FAIL

XRCC3--AC244502.3

1.0

0.0

INCL_NON_REF_SPLICE

XRCC3^ENSG00000126215.14

chr14:103703176:-

AC244502.3^ENSG00000259042.3

chr14:22417661:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1140:7456:3046

NO_LDAS

0.0034

1.8892

1.9656

"[""INTRACHROMOSOMAL[chr14:81.28Mb]""]"

chr14:103703176-chr14:22417661

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

XPO6--ZNF585B

1.0

0.0

ONLY_REF_SPLICE

XPO6^ENSG00000169180.12

chr16:28211366:-

ZNF585B^ENSG00000245680.11

chr19:37207254:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1404:45673:7081

YES_LDAS

0.0034

1.7968

1.5058

"[""INTERCHROMOSOMAL[chr16--chr19]""]"

chr16:28211366-chr19:37207254

False

Read

count

too

low:

FAIL

XPO4--ZNF543

1.0

0.0

ONLY_REF_SPLICE

XPO4^ENSG00000132953.17

chr13:20790462:-

ZNF543^ENSG00000178229.8

chr19:57323682:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2220:45002:26853

YES_LDAS

0.0034

1.9899

1.7465

"[""INTERCHROMOSOMAL[chr13--chr19]""]"

chr13:20790462-chr19:57323682

False

Read

count

too

low:

FAIL

WDR83--AFAP1L2

1.0

0.0

INCL_NON_REF_SPLICE

WDR83^ENSG00000123154.12

chr19:12673316:+

AFAP1L2^ENSG00000169129.15

chr10:114308473:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2201:48626:6114

NO_LDAS

0.0034

1.7232

1.9086

"[""INTERCHROMOSOMAL[chr19--chr10]""]"

chr19:12673316-chr10:114308473

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

WDR76--POLR2J2

0.2

0.0

ONLY_REF_SPLICE

WDR76^ENSG00000092470.12

chr15:43827092:+

POLR2J2^ENSG00000228049.7

chr7:102666163:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2461:6979:26600

YES_LDAS

0.0007

1.8256

1.7465

"[""INTERCHROMOSOMAL[chr15--chr7]""]"

chr15:43827092-chr7:102666163

False

Read

count

too

low:

FAIL

WDR76--AC004980.3

0.2

0.0

INCL_NON_REF_SPLICE

WDR76^ENSG00000092470.12

chr15:43827092:+

AC004980.3^ENSG00000230305.2

chr7:76527766:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2461:6979:26600

YES_LDAS

0.0007

1.8256

1.7465

"[""INTERCHROMOSOMAL[chr15--chr7]""]"

chr15:43827092-chr7:76527766

False

Read

count

too

low:

FAIL

WDR59--AL136456.1

1.0

0.0

ONLY_REF_SPLICE

WDR59^ENSG00000103091.15

chr16:74885653:-

AL136456.1^ENSG00000227240.2

chr1:193673210:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1215:34671:13331

YES_LDAS

0.0034

1.9329

1.5628

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:74885653-chr1:193673210

False

Read

count

too

low:

FAIL

WDR46--OR5AU1

1.0

0.0

INCL_NON_REF_SPLICE

WDR46^ENSG00000227057.10

chr6:33288804:-

OR5AU1^ENSG00000169327.5

chr14:21149401:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2197:32147:27763

NO_LDAS

0.0034

1.5058

1.6729

"[""INTERCHROMOSOMAL[chr6--chr14]""]"

chr6:33288804-chr14:21149401

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

WDR37--LARP4B

1.0

0.0

ONLY_REF_SPLICE

WDR37^ENSG00000047056.16

chr10:1056564:+

LARP4B^ENSG00000107929.15

chr10:885760:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2372:16274:7726

YES_LDAS

0.0034

1.2729

1.9899

"[""INTRACHROMOSOMAL[chr10:0.12Mb]""]"

chr10:1056564-chr10:885760

False

Read

count

too

low:

FAIL

WDR3--STRN

1.0

0.0

INCL_NON_REF_SPLICE

WDR3^ENSG00000065183.16

chr1:117933311:+

STRN^ENSG00000115808.12

chr2:36877905:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1220:38109:13849

NO_LDAS

0.0034

1.9899

1.7819

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr1--chr2]""]"

chr1:117933311-chr2:36877905

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

WDFY2--INTS6-AS1

1.0

0.0

ONLY_REF_SPLICE

WDFY2^ENSG00000139668.9

chr13:51584824:+

INTS6-AS1^ENSG00000236778.8

chr13:51512189:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1472:38513:7292

YES_LDAS

0.0034

1.9086

"[""INTRACHROMOSOMAL[chr13:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[29777]""]"

chr13:51584824-chr13:51512189

False

Read

count

too

low:

FAIL

WDCP--CBFA2T3

1.0

0.0

INCL_NON_REF_SPLICE

WDCP^ENSG00000163026.12

chr2:24029500:-

CBFA2T3^ENSG00000129993.15

chr16:88886061:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1452:12010:15615

YES_LDAS

0.0034

1.7819

1.9656

"[""INTERCHROMOSOMAL[chr2--chr16]""]"

chr2:24029500-chr16:88886061

False

Read

count

too

low:

FAIL

WASHC2A--HOOK3

0.5

0.0

INCL_NON_REF_SPLICE

WASHC2A^ENSG00000099290.17

chr10:50080931:+

HOOK3^ENSG00000168172.9

chr8:43023646:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2413:13054:23195

NO_LDAS

0.0017

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr10--chr8]""]"

chr10:50080931-chr8:43023646

True

pair|recurrent

breakpoints

Blacklisted

FAIL

WASH3P--FBXO25

0.08

0.0

ONLY_REF_SPLICE

WASH3P^ENSG00000185596.16

chr15:101966223:+

FBXO25^ENSG00000147364.17

chr8:413073:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2248:11153:22565

YES_LDAS

0.0003

1.9656

"[""INTERCHROMOSOMAL[chr15--chr8]""]"

chr15:101966223-chr8:413073

False

Read

count

too

low:

FAIL

WASH3P--DOCK1

0.17

0.0

ONLY_REF_SPLICE

WASH3P^ENSG00000185596.16

chr15:101966223:+

DOCK1^ENSG00000150760.13

chr10:126970702:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1128:16468:18964

YES_LDAS

0.0006

1.9656

1.6402

"[""INTERCHROMOSOMAL[chr15--chr10]""]"

chr15:101966223-chr10:126970702

False

Read

count

too

low:

FAIL

WASH3P--ABLIM2

0.17

0.0

ONLY_REF_SPLICE

WASH3P^ENSG00000185596.16

chr15:101966223:+

ABLIM2^ENSG00000163995.21

chr4:8061054:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1203:47129:25774

NO_LDAS

0.0006

1.9656

1.5656

"[""INTERCHROMOSOMAL[chr15--chr4]""]"

chr15:101966223-chr4:8061054

False

Read

count

too

low:

FAIL

VTI1A--AL158212.1

1.0

0.0

ONLY_REF_SPLICE

VTI1A^ENSG00000151532.14

chr10:112668998:+

AL158212.1^ENSG00000225292.2

chr10:112890966:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1470:46005:16708

YES_LDAS

0.0034

1.7465

1.9329

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:0.07Mb]"",""NEIGHBORS[69991]""]"

chr10:112668998-chr10:112890966

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

VSIG2--TMEM202-AS1

1.0

0.0

INCL_NON_REF_SPLICE

VSIG2^ENSG00000019102.12

chr11:124751500:-

TMEM202-AS1^ENSG00000261423.1

chr15:72474856:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2346:51231:18669

YES_LDAS

0.0034

1.8892

1.4716

"[""INTERCHROMOSOMAL[chr11--chr15]""]"

chr11:124751500-chr15:72474856

False

Read

count

too

low:

FAIL

VPS8--KIDINS220

1.0

0.0

ONLY_REF_SPLICE

VPS8^ENSG00000156931.16

chr3:184870805:+

KIDINS220^ENSG00000134313.16

chr2:8751644:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1230:22633:16385

YES_LDAS

0.0034

1.9899

1.4716

"[""INTERCHROMOSOMAL[chr3--chr2]""]"

chr3:184870805-chr2:8751644

False

Read

count

too

low:

FAIL

VPS54--CCDC88A

1.0

0.0

ONLY_REF_SPLICE

VPS54^ENSG00000143952.20

chr2:63912345:-

CCDC88A^ENSG00000115355.17

chr2:55388886:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1145:4988:14634

YES_LDAS

0.0034

1.9086

1.8323

"[""INTRACHROMOSOMAL[chr2:8.47Mb]""]"

chr2:63912345-chr2:55388886

False

Read

count

too

low:

FAIL

VPS50--SEM1

1.0

0.0

ONLY_REF_SPLICE

VPS50^ENSG00000004766.17

chr7:93239934:+

SEM1^ENSG00000127922.9

chr7:96645936:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2258:41952:14003

YES_LDAS

0.0034

1.8892

"[""INTRACHROMOSOMAL[chr7:3.12Mb]""]"

chr7:93239934-chr7:96645936

False

Read

count

too

low:

FAIL

VPS36--ZSWIM7

1.0

0.0

ONLY_REF_SPLICE

VPS36^ENSG00000136100.14

chr13:52417437:-

ZSWIM7^ENSG00000214941.8

chr17:15987368:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1166:18814:29053

NO_LDAS

0.0034

1.6049

1.8295

"[""INTERCHROMOSOMAL[chr13--chr17]""]"

chr13:52417437-chr17:15987368

False

Read

count

too

low:

FAIL

VPS36--GCSH

0.5

0.0

INCL_NON_REF_SPLICE

VPS36^ENSG00000136100.14

chr13:52417652:-

GCSH^ENSG00000140905.11

chr16:81084266:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1373:9203:18431

NO_LDAS

0.0017

1.6402

1.5656

"[""INTERCHROMOSOMAL[chr13--chr16]""]"

chr13:52417652-chr16:81084266

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

VPS28--RN7SL711P

0.17

0.0

INCL_NON_REF_SPLICE

VPS28^ENSG00000160948.14

chr8:144427266:-

RN7SL711P^ENSG00000276047.1

chr5:123070832:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2247:9122:13751

YES_LDAS

0.0006

1.9086

1.7968

"[""INTERCHROMOSOMAL[chr8--chr5]""]"

chr8:144427266-chr5:123070832

False

Read

count

too

low:

FAIL

VPS26B--IMP4

1.0

0.0

INCL_NON_REF_SPLICE

VPS26B^ENSG00000151502.11

chr11:134246794:+

IMP4^ENSG00000136718.10

chr2:130345376:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1297:7553:21038

NO_LDAS

0.0034

1.7056

1.9086

"[""INTERCHROMOSOMAL[chr11--chr2]""]"

chr11:134246794-chr2:130345376

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

VPS26A--TMEM126A

1.0

0.0

INCL_NON_REF_SPLICE

VPS26A^ENSG00000122958.15

chr10:69168615:+

TMEM126A^ENSG00000171202.7

chr11:85648055:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1344:14017:9225

NO_LDAS

0.0034

1.6895

1.5656

"[""INTERCHROMOSOMAL[chr10--chr11]""]"

chr10:69168615-chr11:85648055

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

VPS13A--NAP1L4

1.0

0.0

INCL_NON_REF_SPLICE

VPS13A^ENSG00000197969.14

chr9:77250109:+

NAP1L4^ENSG00000205531.13

chr11:2951290:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1230:13337:1631

NO_LDAS

0.0034

1.6895

1.7056

"[""INTERCHROMOSOMAL[chr9--chr11]""]"

chr9:77250109-chr11:2951290

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

VN2R19P--GRB7

1.0

0.0

INCL_NON_REF_SPLICE

VN2R19P^ENSG00000235974.1

chr19:58025884:-

GRB7^ENSG00000141738.14

chr17:39743393:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1266:43392:3915

NO_LDAS

0.0034

1.4256

1.6402

"[""INTERCHROMOSOMAL[chr19--chr17]""]"

chr19:58025884-chr17:39743393

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

VKORC1L1--SLCO2A1

0.5

0.0

INCL_NON_REF_SPLICE

VKORC1L1^ENSG00000196715.7

chr7:65873282:+

SLCO2A1^ENSG00000174640.15

chr3:134029855:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2105:49896:7109

YES_LDAS

0.0017

1.1589

1.3996

"[""INTERCHROMOSOMAL[chr7--chr3]""]"

chr7:65873282-chr3:134029855

False

Read

count

too

low:

FAIL

VIPR1--TRAF7

1.0

0.0

INCL_NON_REF_SPLICE

VIPR1^ENSG00000114812.13

chr3:42513802:+

TRAF7^ENSG00000131653.13

chr16:2163886:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1156:14114:1238

YES_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr3--chr16]""]"

chr3:42513802-chr16:2163886

False

Read

count

too

low:

FAIL

VILL--ELK3

1.0

0.0

INCL_NON_REF_SPLICE

VILL^ENSG00000136059.14

chr3:37999397:+

ELK3^ENSG00000111145.8

chr12:96247686:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1280:32956:21514

YES_LDAS

0.0034

1.9899

1.2366

"[""INTERCHROMOSOMAL[chr3--chr12]""]"

chr3:37999397-chr12:96247686

False

Read

count

too

low:

FAIL

VDR--CTU2

1.0

0.0

INCL_NON_REF_SPLICE

VDR^ENSG00000111424.12

chr12:47843663:-

CTU2^ENSG00000174177.13

chr16:88712177:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1259:32324:12406

NO_LDAS

0.0034

1.1589

1.7465

"[""INTERCHROMOSOMAL[chr12--chr16]""]"

chr12:47843663-chr16:88712177

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

VDAC2--FBXW2

1.0

0.0

INCL_NON_REF_SPLICE

VDAC2^ENSG00000165637.13

chr10:75222406:+

FBXW2^ENSG00000119402.17

chr9:120753019:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1236:25189:15573

YES_LDAS

0.0034

1.7968

1.8892

"[""INTERCHROMOSOMAL[chr10--chr9]""]"

chr10:75222406-chr9:120753019

False

Read

count

too

low:

FAIL

VANGL2--CKAP4

1.0

0.0

INCL_NON_REF_SPLICE

VANGL2^ENSG00000162738.6

chr1:160421187:+

CKAP4^ENSG00000136026.14

chr12:106247455:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1390:32867:10654

NO_LDAS

0.0034

1.5058

1.8892

"[""INTERCHROMOSOMAL[chr1--chr12]""]"

chr1:160421187-chr12:106247455

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

UTP25--TSPAN1

1.0

0.0

INCL_NON_REF_SPLICE

UTP25^ENSG00000117597.18

chr1:209854579:+

TSPAN1^ENSG00000117472.10

chr1:46184594:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2398:31038:9814

NO_LDAS

0.0034

1.8062

1.2729

"[""INTRACHROMOSOMAL[chr1:163.64Mb]""]"

chr1:209854579-chr1:46184594

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

USPL1--AC008906.1

1.0

0.0

INCL_NON_REF_SPLICE

USPL1^ENSG00000132952.12

chr13:30659414:+

AC008906.1^ENSG00000248734.2

chr5:96785671:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1164:49516:21724

NO_LDAS

0.0034

1.7232

1.7465

"[""INTERCHROMOSOMAL[chr13--chr5]""]"

chr13:30659414-chr5:96785671

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

USP51--AFG3L2

1.0

0.0

INCL_NON_REF_SPLICE

USP51^ENSG00000247746.4

chrX:55485210:-

AFG3L2^ENSG00000141385.10

chr18:12344236:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1419:37721:26937

NO_LDAS

0.0034

1.8062

1.9656

"[""INTERCHROMOSOMAL[chrX--chr18]""]"

chrX:55485210-chr18:12344236

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

USP48--RAB1B

0.5

0.0

INCL_NON_REF_SPLICE

USP48^ENSG00000090686.16

chr1:21678780:-

RAB1B^ENSG00000174903.16

chr11:66276281:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2108:38068:19748

NO_LDAS

0.0017

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr1--chr11]""]"

chr1:21678780-chr11:66276281

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

USP39--ABO

1.0

0.0

ONLY_REF_SPLICE

USP39^ENSG00000168883.20

chr2:85625691:+

ABO^ENSG00000175164.16

chr9:133251152:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1449:40293:28842

YES_LDAS

0.0034

1.9656

1.8323

"[""INTERCHROMOSOMAL[chr2--chr9]""]"

chr2:85625691-chr9:133251152

False

Read

count

too

low:

FAIL

USP32--TRIM37

1.0

0.0

ONLY_REF_SPLICE

USP32^ENSG00000170832.13

chr17:60391882:-

TRIM37^ENSG00000108395.14

chr17:59091340:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1186:51061:13583

YES_LDAS

0.0034

1.6402

1.8892

"[""INTRACHROMOSOMAL[chr17:1.07Mb]""]"

chr17:60391882-chr17:59091340

False

Read

count

too

low:

FAIL

USP11--LINC02236

1.0

0.0

ONLY_REF_SPLICE

USP11^ENSG00000102226.10

chrX:47233219:+

LINC02236^ENSG00000251365.4

chr5:6775559:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1456:48149:28324

YES_LDAS

0.0034

1.7465

1.9656

"[""INTERCHROMOSOMAL[chrX--chr5]""]"

chrX:47233219-chr5:6775559

False

Read

count

too

low:

FAIL

USH1C--CAMTA2

1.0

0.0

INCL_NON_REF_SPLICE

USH1C^ENSG00000006611.17

chr11:17544277:-

CAMTA2^ENSG00000108509.21

chr17:4968379:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1382:37332:15979

YES_LDAS

0.0034

1.8892

1.7465

"[""INTERCHROMOSOMAL[chr11--chr17]""]"

chr11:17544277-chr17:4968379

False

Read

count

too

low:

FAIL

UQCRH--ZGPAT

1.0

0.0

INCL_NON_REF_SPLICE

UQCRH^ENSG00000173660.12

chr1:46303820:+

ZGPAT^ENSG00000197114.12

chr20:63708938:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2449:33902:6535

NO_LDAS

0.0034

1.7968

0.971

"[""INTERCHROMOSOMAL[chr1--chr20]""]"

chr1:46303820-chr20:63708938

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

UQCC1--DHRSX

1.0

0.0

ONLY_REF_SPLICE

UQCC1^ENSG00000101019.22

chr20:35347164:-

DHRSX^ENSG00000169084.15

chrX:2392474:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2428:18531:13681

YES_LDAS

0.0034

1.7232

1.9656

"[""INTERCHROMOSOMAL[chr20--chrY]""]"

chr20:35347164-chrX:2392474

False

Read

count

too

low:

FAIL

UPK3BL1--CFAP206

0.5

0.0

INCL_NON_REF_SPLICE

UPK3BL1^ENSG00000267368.1

chr7:102638714:-

CFAP206^ENSG00000272514.6

chr6:87435851:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1365:22277:26110

YES_LDAS

0.0017

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr7--chr6]""]"

chr7:102638714-chr6:87435851

False

Read

count

too

low:

FAIL

UPK3BL1--AL133492.1

0.5

0.0

INCL_NON_REF_SPLICE

UPK3BL1^ENSG00000267368.1

chr7:102539677:-

AL133492.1^ENSG00000275139.1

chr21:45763762:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1389:51247:4825

NO_LDAS

0.0017

1.7056

1.7465

"[""INTERCHROMOSOMAL[chr7--chr21]""]"

chr7:102539677-chr21:45763762

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

UNKL--TMCC3

1.0

0.0

INCL_NON_REF_SPLICE

UNKL^ENSG00000059145.19

chr16:1367656:-

TMCC3^ENSG00000057704.13

chr12:94650437:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2263:24388:24471

NO_LDAS

0.0034

1.7819

1.6402

"[""INTERCHROMOSOMAL[chr16--chr12]""]"

chr16:1367656-chr12:94650437

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

UMAD1--TMEM9B-AS1

1.0

0.0

INCL_NON_REF_SPLICE

UMAD1^ENSG00000219545.11

chr7:7676208:+

TMEM9B-AS1^ENSG00000254860.6

chr11:8968617:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1117:6776:6941

YES_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr7--chr11]""]"

chr7:7676208-chr11:8968617

False

Read

count

too

low:

FAIL

UMAD1--AL731533.1

1.0

0.0

INCL_NON_REF_SPLICE

UMAD1^ENSG00000219545.11

chr7:7673453:+

AL731533.1^ENSG00000234182.2

chr10:3011620:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1325:40423:21696

YES_LDAS

0.0034

1.8295

1.8062

"[""INTERCHROMOSOMAL[chr7--chr10]""]"

chr7:7673453-chr10:3011620

False

Read

count

too

low:

FAIL

UICLM--OGA

1.0

0.0

ONLY_REF_SPLICE

UICLM^ENSG00000233392.5

chr2:240967327:-

OGA^ENSG00000198408.14

chr10:101792943:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2225:9098:18641

YES_LDAS

0.0034

1.6895

1.8892

"[""INTERCHROMOSOMAL[chr2--chr10]""]"

chr2:240967327-chr10:101792943

False

Read

count

too

low:

FAIL

UCKL1--ADCY7

1.0

0.0

ONLY_REF_SPLICE

UCKL1^ENSG00000198276.16

chr20:63956260:-

ADCY7^ENSG00000121281.13

chr16:50304360:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1406:46919:24260

YES_LDAS

0.0034

1.6895

1.4566

"[""INTERCHROMOSOMAL[chr20--chr16]""]"

chr20:63956260-chr16:50304360

False

Read

count

too

low:

FAIL

UBXN6--AL513210.1

1.0

0.0

INCL_NON_REF_SPLICE

UBXN6^ENSG00000167671.12

chr19:4452364:-

AL513210.1^ENSG00000225879.2

chr6:168964340:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1353:30084:24415

NO_LDAS

0.0034

1.9329

1.7465

"[""INTERCHROMOSOMAL[chr19--chr6]""]"

chr19:4452364-chr6:168964340

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

UBXN4--R3HDM1

1.0

0.0

ONLY_REF_SPLICE

UBXN4^ENSG00000144224.17

chr2:135742011:+

R3HDM1^ENSG00000048991.16

chr2:135631718:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2196:14235:15601

YES_LDAS

0.0034

1.6895

1.9086

"[""YOSHIHARA_TCGA"",""GUO2018CR_TCGA"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[16464]""]"

chr2:135742011-chr2:135631718

False

Read

count

too

low:

FAIL

UBXN2B--HHLA2

1.0

0.0

ONLY_REF_SPLICE

UBXN2B^ENSG00000215114.10

chr8:58416953:+

HHLA2^ENSG00000114455.13

chr3:108376493:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1422:31443:3648

YES_LDAS

0.0034

1.6895

1.9329

"[""INTERCHROMOSOMAL[chr8--chr3]""]"

chr8:58416953-chr3:108376493

False

Read

count

too

low:

FAIL

UBR5--RAB28

1.0

0.0

ONLY_REF_SPLICE

UBR5^ENSG00000104517.13

chr8:102412173:-

RAB28^ENSG00000157869.16

chr4:13361633:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1305:19008:6661

NO_LDAS

0.0034

1.9086

1.4295

"[""INTERCHROMOSOMAL[chr8--chr4]""]"

chr8:102412173-chr4:13361633

False

Read

count

too

low:

FAIL

UBR1--NPTN

1.0

0.0

ONLY_REF_SPLICE

UBR1^ENSG00000159459.12

chr15:43037773:-

NPTN^ENSG00000156642.17

chr15:73592137:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2317:19550:17913

YES_LDAS

0.0034

1.8892

1.9656

"[""INTRACHROMOSOMAL[chr15:30.45Mb]""]"

chr15:43037773-chr15:73592137

False

Read

count

too

low:

FAIL

UBE3D--ME1

1.0

0.0

ONLY_REF_SPLICE

UBE3D^ENSG00000118420.17

chr6:82957312:-

ME1^ENSG00000065833.9

chr6:83407901:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1155:46676:26586

YES_LDAS

0.0034

1.9219

1.9086

"[""INTRACHROMOSOMAL[chr6:0.14Mb]""]"

chr6:82957312-chr6:83407901

False

Read

count

too

low:

FAIL

UBE3A--CYFIP1

1.0

0.0

ONLY_REF_SPLICE

UBE3A^ENSG00000114062.22

chr15:25438489:-

CYFIP1^ENSG00000273749.5

chr15:22947318:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1413:34137:6353

YES_LDAS

0.0034

1.4566

1.9899

"[""INTRACHROMOSOMAL[chr15:2.35Mb]""]"

chr15:25438489-chr15:22947318

False

Read

count

too

low:

FAIL

UBE2R2--DCAF12

1.0

0.0

ONLY_REF_SPLICE

UBE2R2^ENSG00000107341.5

chr9:33817934:+

DCAF12^ENSG00000198876.13

chr9:34107565:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1187:12318:16820

YES_LDAS

0.0034

1.9656

1.8295

"[""INTRACHROMOSOMAL[chr9:0.17Mb]""]"

chr9:33817934-chr9:34107565

False

Read

count

too

low:

FAIL

UBE2Q2P1--TULP4

1.0

0.0

INCL_NON_REF_SPLICE

UBE2Q2P1^ENSG00000189136.9

chr15:84527443:-

TULP4^ENSG00000130338.13

chr6:158509154:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2396:32664:3550

YES_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr15--chr6]""]"

chr15:84527443-chr6:158509154

False

Read

count

too

low:

FAIL

UBE2G2--CEPT1

1.0

0.0

ONLY_REF_SPLICE

UBE2G2^ENSG00000184787.19

chr21:44777299:-

CEPT1^ENSG00000134255.14

chr1:111147642:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1121:32575:21192

YES_LDAS

0.0034

1.8256

1.7819

"[""INTERCHROMOSOMAL[chr21--chr1]""]"

chr21:44777299-chr1:111147642

False

Read

count

too

low:

FAIL

UBE2G1--GPATCH8

1.0

0.0

ONLY_REF_SPLICE

UBE2G1^ENSG00000132388.12

chr17:4366271:-

GPATCH8^ENSG00000186566.13

chr17:44424492:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2210:19130:19959

NO_LDAS

0.0034

1.7819

"[""INTRACHROMOSOMAL[chr17:40.03Mb]""]"

chr17:4366271-chr17:44424492

False

Read

count

too

low:

FAIL

UBE2E1--UBE2E3

1.0

0.0

ONLY_REF_SPLICE

UBE2E1^ENSG00000170142.12

chr3:23811510:+

UBE2E3^ENSG00000170035.16

chr2:181057693:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2354:2901:24078

NO_LDAS

0.0034

1.9329

1.9219

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr2]""]"

chr3:23811510-chr2:181057693

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

UBE2E1--NDN

1.0

0.0

INCL_NON_REF_SPLICE

UBE2E1^ENSG00000170142.12

chr3:23810818:+

NDN^ENSG00000182636.8

chr15:23686992:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2117:4325:16988

NO_LDAS

0.0034

1.053

1.4295

"[""INTERCHROMOSOMAL[chr3--chr15]""]"

chr3:23810818-chr15:23686992

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

UBE2D3--TBRG4

1.0

0.0

INCL_NON_REF_SPLICE

UBE2D3^ENSG00000109332.20

chr4:102811552:-

TBRG4^ENSG00000136270.14

chr7:45103229:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2372:46522:27329

NO_LDAS

0.0034

1.8892

"[""INTERCHROMOSOMAL[chr4--chr7]""]"

chr4:102811552-chr7:45103229

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

UBB--FAAH

0.33

0.0

INCL_NON_REF_SPLICE

UBB^ENSG00000170315.14

chr17:16382361:+

FAAH^ENSG00000117480.16

chr1:46412143:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2243:12148:12686

YES_LDAS

0.0011

1.7968

1.9086

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:16382361-chr1:46412143

False

Read

count

too

low:

FAIL

UBB--FAAH

0.33

0.0

INCL_NON_REF_SPLICE

UBB^ENSG00000170315.14

chr17:16382133:+

FAAH^ENSG00000117480.16

chr1:46412143:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2243:12148:12686

YES_LDAS

0.0011

1.7968

1.9086

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:16382133-chr1:46412143

False

Read

count

too

low:

FAIL

UBAP1--CNBP

1.0

0.0

ONLY_REF_SPLICE

UBAP1^ENSG00000165006.14

chr9:34220948:+

CNBP^ENSG00000169714.17

chr3:129171771:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1218:8127:29431

NO_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr9--chr3]""]"

chr9:34220948-chr3:129171771

False

Read

count

too

low:

FAIL

UBAP1--AC023090.2

1.0

0.0

INCL_NON_REF_SPLICE

UBAP1^ENSG00000165006.14

chr9:34242112:+

AC023090.2^ENSG00000279077.1

chr18:79354553:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1458:4382:24625

YES_LDAS

0.0034

1.9656

"[""INTERCHROMOSOMAL[chr9--chr18]""]"

chr9:34242112-chr18:79354553

False

Read

count

too

low:

FAIL

UBA2--TOR1A

0.5

0.0

INCL_NON_REF_SPLICE

UBA2^ENSG00000126261.13

chr19:34430207:+

TOR1A^ENSG00000136827.12

chr9:129821783:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2278:40495:14732

YES_LDAS

0.0017

1.7232

1.9899

"[""INTERCHROMOSOMAL[chr19--chr9]""]"

chr19:34430207-chr9:129821783

False

Read

count

too

low:

FAIL

UBA2--PDCD2L

1.0

0.0

ONLY_REF_SPLICE

UBA2^ENSG00000126261.13

chr19:34428570:+

PDCD2L^ENSG00000126249.8

chr19:34421519:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2250:24825:16063

YES_LDAS

0.0034

1.8295

1.8323

"[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2184]""]"

chr19:34428570-chr19:34421519

False

Read

count

too

low:

FAIL

UBA2--DRAXIN

0.5

0.0

INCL_NON_REF_SPLICE

UBA2^ENSG00000126261.13

chr19:34430207:+

DRAXIN^ENSG00000162490.7

chr1:11722955:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2278:40495:14732

YES_LDAS

0.0017

1.7232

1.9899

"[""INTERCHROMOSOMAL[chr19--chr1]""]"

chr19:34430207-chr1:11722955

False

Read

count

too

low:

FAIL

UAP1--RASAL2

1.0

0.0

ONLY_REF_SPLICE

UAP1^ENSG00000117143.13

chr1:162566348:+

RASAL2^ENSG00000075391.17

chr1:178283564:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2341:45325:4237

YES_LDAS

0.0034

1.8323

1.8892

"[""INTRACHROMOSOMAL[chr1:15.49Mb]""]"

chr1:162566348-chr1:178283564

False

Read

count

too

low:

FAIL

TYW1--IRAK4

1.0

0.0

INCL_NON_REF_SPLICE

TYW1^ENSG00000198874.13

chr7:67017933:+

IRAK4^ENSG00000198001.14

chr12:43786925:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2387:24582:28086

YES_LDAS

0.0034

1.7968

1.8062

"[""INTERCHROMOSOMAL[chr7--chr12]""]"

chr7:67017933-chr12:43786925

False

Read

count

too

low:

FAIL

TYW1--CALN1

0.5

0.0

ONLY_REF_SPLICE

TYW1^ENSG00000198874.13

chr7:67195337:+

CALN1^ENSG00000183166.11

chr7:72278810:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1340:39856:24639

YES_LDAS

0.0017

1.6729

1.9086

"[""INTRACHROMOSOMAL[chr7:4.54Mb]""]"

chr7:67195337-chr7:72278810

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

TYMSOS--CLEC17A

1.0

0.0

INCL_NON_REF_SPLICE

TYMSOS^ENSG00000176912.5

chr18:642307:-

CLEC17A^ENSG00000187912.12

chr19:14599717:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1158:3734:2429

YES_LDAS

0.0034

1.9329

1.9219

"[""INTERCHROMOSOMAL[chr18--chr19]""]"

chr18:642307-chr19:14599717

False

Read

count

too

low:

FAIL

TXNRD2--BOLA2

0.5

0.0

ONLY_REF_SPLICE

TXNRD2^ENSG00000184470.21

chr22:19883325:-

BOLA2^ENSG00000183336.8

chr16:29453732:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1427:14640:13023

YES_LDAS

0.0017

1.5546

1.8295

"[""INTERCHROMOSOMAL[chr22--chr16]""]"

chr22:19883325-chr16:29453732

False

Read

count

too

low:

FAIL

TXNDC11--AC021683.2

1.0

0.0

ONLY_REF_SPLICE

TXNDC11^ENSG00000153066.13

chr16:11721577:-

AC021683.2^ENSG00000267506.5

chr17:77547971:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1186:41102:27806

YES_LDAS

0.0034

1.6402

1.8892

"[""INTERCHROMOSOMAL[chr16--chr17]""]"

chr16:11721577-chr17:77547971

True

pair|recurrent

breakpoints

Blacklisted

FAIL

TXN--HMG20B

1.0

0.0

INCL_NON_REF_SPLICE

TXN^ENSG00000136810.13

chr9:110251432:-

HMG20B^ENSG00000064961.19

chr19:3573292:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1103:10813:5050

YES_LDAS

0.0034

1.9086

1.5628

"[""INTERCHROMOSOMAL[chr9--chr19]""]"

chr9:110251432-chr19:3573292

False

Read

count

too

low:

FAIL

TXLNGY--ANKRD36BP2

0.5

0.0

INCL_NON_REF_SPLICE

TXLNGY^ENSG00000131002.12

chrY:19603918:+

ANKRD36BP2^ENSG00000230006.7

chr2:88802127:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1314:33392:8595

NO_LDAS

0.0017

1.7819

1.9329

"[""INTERCHROMOSOMAL[chrY--chr2]""]"

chrY:19603918-chr2:88802127

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TUBGCP3--ZNF827

1.0

0.0

ONLY_REF_SPLICE

TUBGCP3^ENSG00000126216.15

chr13:112587905:-

ZNF827^ENSG00000151612.18

chr4:145903215:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1206:37801:18950

NO_LDAS

0.0034

1.6402

1.8062

"[""INTERCHROMOSOMAL[chr13--chr4]""]"

chr13:112587905-chr4:145903215

False

Read

count

too

low:

FAIL

TUBB8P6--TUBB2BP1

1.0

0.0

INCL_NON_REF_SPLICE

TUBB8P6^ENSG00000224625.2

chr1:242057141:+

TUBB2BP1^ENSG00000216819.1

chr6:3179712:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1434:25262:16343

NO_LDAS

0.0034

1.7819

1.8323

"[""INTERCHROMOSOMAL[chr1--chr6]""]"

chr1:242057141-chr6:3179712

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TUBB2A--C8orf44

1.0

0.0

INCL_NON_REF_SPLICE

TUBB2A^ENSG00000137267.7

chr6:3157432:-

C8orf44^ENSG00000288596.2

chr8:66680618:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2181:18135:23139

NO_LDAS

0.0034

1.7819

1.6402

"[""INTERCHROMOSOMAL[chr6--chr8]""]"

chr6:3157432-chr8:66680618

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TTLL3--C18orf32

1.0

0.0

INCL_NON_REF_SPLICE

TTLL3^ENSG00000214021.16

chr3:9835401:+

C18orf32^ENSG00000177576.12

chr18:49481797:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1365:31920:3354

NO_LDAS

0.0034

1.3753

1.2419

"[""INTERCHROMOSOMAL[chr3--chr18]""]"

chr3:9835401-chr18:49481797

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TTC33--RAI14

1.0

0.0

ONLY_REF_SPLICE

TTC33^ENSG00000113638.14

chr5:40746798:-

RAI14^ENSG00000039560.14

chr5:34795939:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2263:25755:4867

NO_LDAS

0.0034

1.6402

1.6895

"[""INTRACHROMOSOMAL[chr5:5.68Mb]""]"

chr5:40746798-chr5:34795939

False

Read

count

too

low:

FAIL

TTC33--HMGCS1

1.0

0.0

ONLY_REF_SPLICE

TTC33^ENSG00000113638.14

chr5:40746798:-

HMGCS1^ENSG00000112972.15

chr5:43298975:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2498:32227:20982

YES_LDAS

0.0034

1.6402

1.6895

"[""INTRACHROMOSOMAL[chr5:2.53Mb]""]"

chr5:40746798-chr5:43298975

False

Read

count

too

low:

FAIL

TTC23--ZNF236

0.33

0.0

INCL_NON_REF_SPLICE

TTC23^ENSG00000103852.13

chr15:99234988:-

ZNF236^ENSG00000130856.17

chr18:76849622:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1316:31451:23728

NO_LDAS

0.0011

1.8892

1.8256

"[""INTERCHROMOSOMAL[chr15--chr18]""]"

chr15:99234988-chr18:76849622

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TSPAN3--FNDC3B

1.0

0.0

ONLY_REF_SPLICE

TSPAN3^ENSG00000140391.15

chr15:77070892:-

FNDC3B^ENSG00000075420.13

chr3:172112452:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2484:9786:5568

YES_LDAS

0.0034

1.9086

1.7968

"[""INTERCHROMOSOMAL[chr15--chr3]""]"

chr15:77070892-chr3:172112452

False

Read

count

too

low:

FAIL

TSPAN3--ETFA

1.0

0.0

ONLY_REF_SPLICE

TSPAN3^ENSG00000140391.15

chr15:77070892:-

ETFA^ENSG00000140374.16

chr15:76231398:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2175:17665:17927

YES_LDAS

0.0034

1.9086

1.7968

"[""INTRACHROMOSOMAL[chr15:0.73Mb]""]"

chr15:77070892-chr15:76231398

False

Read

count

too

low:

FAIL

TSPAN18--PRRT4

1.0

0.0

INCL_NON_REF_SPLICE

TSPAN18^ENSG00000157570.12

chr11:44909646:+

PRRT4^ENSG00000224940.9

chr7:128350700:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1160:42041:18249

NO_LDAS

0.0034

1.7465

1.9656

"[""INTERCHROMOSOMAL[chr11--chr7]""]"

chr11:44909646-chr7:128350700

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TSNARE1--AC008132.1

1.0

0.0

INCL_NON_REF_SPLICE

TSNARE1^ENSG00000171045.16

chr8:142343966:-

AC008132.1^ENSG00000161103.11

chr22:18860706:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1347:26645:3242

NO_LDAS

0.0034

1.7819

1.7968

"[""INTERCHROMOSOMAL[chr8--chr22]""]"

chr8:142343966-chr22:18860706

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TSGA10--PHC3

1.0

0.0

ONLY_REF_SPLICE

TSGA10^ENSG00000135951.16

chr2:99064939:-

PHC3^ENSG00000173889.16

chr3:170106946:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1324:21565:28436

YES_LDAS

0.0034

1.7056

1.5546

"[""INTERCHROMOSOMAL[chr2--chr3]""]"

chr2:99064939-chr3:170106946

False

Read

count

too

low:

FAIL

TSEN34--CBLC

1.0

0.0

ONLY_REF_SPLICE

TSEN34^ENSG00000170892.13

chr19:54191964:+

CBLC^ENSG00000142273.13

chr19:44794204:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1243:1057:10374

YES_LDAS

0.0034

1.6895

1.5656

"[""INTRACHROMOSOMAL[chr19:9.39Mb]""]"

chr19:54191964-chr19:44794204

False

Read

count

too

low:

FAIL

TSEN2--PPARG

1.0

0.0

ONLY_REF_SPLICE

TSEN2^ENSG00000154743.19

chr3:12503784:+

PPARG^ENSG00000132170.23

chr3:12379704:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1284:32721:19314

YES_LDAS

0.0034

1.8062

1.9329

"[""YOSHIHARA_TCGA"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr3:0.05Mb]"",""LOCAL_REARRANGEMENT:+:[50065]""]"

chr3:12503784-chr3:12379704

False

Read

count

too

low:

FAIL

TSC1--FBLN2

1.0

0.0

ONLY_REF_SPLICE

TSC1^ENSG00000165699.15

chr9:132944572:-

FBLN2^ENSG00000163520.14

chr3:13608062:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2121:51991:20883

NO_LDAS

0.0034

1.6729

1.7465

"[""INTERCHROMOSOMAL[chr9--chr3]""]"

chr9:132944572-chr3:13608062

False

Read

count

too

low:

FAIL

TRPM8--XRN1

1.0

0.0

ONLY_REF_SPLICE

TRPM8^ENSG00000144481.17

chr2:233966127:+

XRN1^ENSG00000114127.11

chr3:142371328:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2356:33991:18207

YES_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr2--chr3]""]"

chr2:233966127-chr3:142371328

False

Read

count

too

low:

FAIL

TRIR--RBP4

0.5

0.0

INCL_NON_REF_SPLICE

TRIR^ENSG00000123144.11

chr19:12734336:-

RBP4^ENSG00000138207.14

chr10:93593878:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2293:47890:20225

NO_LDAS

0.0017

1.3996

1.4566

"[""INTERCHROMOSOMAL[chr19--chr10]""]"

chr19:12734336-chr10:93593878

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TRIP12--OSBPL2

1.0

0.0

INCL_NON_REF_SPLICE

TRIP12^ENSG00000153827.14

chr2:229840822:-

OSBPL2^ENSG00000130703.17

chr20:62238487:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1161:36750:23294

NO_LDAS

0.0034

1.9899

1.4716

"[""INTERCHROMOSOMAL[chr2--chr20]""]"

chr2:229840822-chr20:62238487

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TRIM80P--AC011511.5

1.0

0.0

INCL_NON_REF_SPLICE

TRIM80P^ENSG00000232724.1

chr17:75077906:+

AC011511.5^ENSG00000267607.1

chr19:10286940:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1239:19558:17478

NO_LDAS

0.0034

1.9086

1.4256

"[""INTERCHROMOSOMAL[chr17--chr19]""]"

chr17:75077906-chr19:10286940

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TRIM73--STAG3L1

0.25

0.0

ONLY_REF_SPLICE

TRIM73^ENSG00000178809.11

chr7:75403740:+

STAG3L1^ENSG00000205583.13

chr7:75385083:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2138:36450:6493

NO_LDAS

0.0009

1.8892

"[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[320]""]"

chr7:75403740-chr7:75385083

False

Read

count

too

low:

FAIL

TRIM71--NUDT14

0.5

0.0

INCL_NON_REF_SPLICE

TRIM71^ENSG00000206557.6

chr3:32818356:+

NUDT14^ENSG00000183828.15

chr14:105181239:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1188:19146:26348

NO_LDAS

0.0017

1.7968

1.1589

"[""INTERCHROMOSOMAL[chr3--chr14]""]"

chr3:32818356-chr14:105181239

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TRIM52--YTHDF3

1.0

0.0

ONLY_REF_SPLICE

TRIM52^ENSG00000183718.5

chr5:181260001:-

YTHDF3^ENSG00000185728.17

chr8:63169387:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1492:39039:27932

NO_LDAS

0.0034

1.8892

1.7465

"[""INTERCHROMOSOMAL[chr5--chr8]""]"

chr5:181260001-chr8:63169387

False

Read

count

too

low:

FAIL

TRIM50--NUDT14

0.5

0.0

INCL_NON_REF_SPLICE

TRIM50^ENSG00000146755.11

chr7:73324626:-

NUDT14^ENSG00000183828.15

chr14:105181239:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1188:19146:26348

NO_LDAS

0.0017

1.6895

1.1589

"[""INTERCHROMOSOMAL[chr7--chr14]""]"

chr7:73324626-chr14:105181239

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TRIM31--HOXB7

1.0

0.0

ONLY_REF_SPLICE

TRIM31^ENSG00000204616.11

chr6:30112389:-

HOXB7^ENSG00000260027.5

chr17:48608095:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2215:6525:18389

YES_LDAS

0.0034

1.9656

1.7819

"[""INTERCHROMOSOMAL[chr6--chr17]""]"

chr6:30112389-chr17:48608095

False

Read

count

too

low:

FAIL

TRIM14--GABPB2

1.0

0.0

ONLY_REF_SPLICE

TRIM14^ENSG00000106785.15

chr9:98118982:-

GABPB2^ENSG00000143458.12

chr1:151088190:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1317:2885:29655

YES_LDAS

0.0034

1.7968

1.8323

"[""INTERCHROMOSOMAL[chr9--chr1]""]"

chr9:98118982-chr1:151088190

False

Read

count

too

low:

FAIL

TRIM14--CHMP1A

1.0

0.0

ONLY_REF_SPLICE

TRIM14^ENSG00000106785.15

chr9:98091909:-

CHMP1A^ENSG00000131165.16

chr16:89647331:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2324:4374:22789

NO_LDAS

0.0034

1.9656

1.8892

"[""INTERCHROMOSOMAL[chr9--chr16]""]"

chr9:98091909-chr16:89647331

False

Read

count

too

low:

FAIL

TRHDE--HPS5

1.0

0.0

INCL_NON_REF_SPLICE

TRHDE^ENSG00000072657.9

chr12:72669190:+

HPS5^ENSG00000110756.18

chr11:18311741:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2361:28789:16596

NO_LDAS

0.0034

1.8062

1.7465

"[""INTERCHROMOSOMAL[chr12--chr11]""]"

chr12:72669190-chr11:18311741

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TRAV4--ZNF543

1.0

0.0

INCL_NON_REF_SPLICE

TRAV4^ENSG00000211778.2

chr14:21736818:+

ZNF543^ENSG00000178229.8

chr19:57328371:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1152:35860:2023

NO_LDAS

0.0034

1.9086

1.8256

"[""INTERCHROMOSOMAL[chr14--chr19]""]"

chr14:21736818-chr19:57328371

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TRAF4--IRAG1

0.5

0.0

INCL_NON_REF_SPLICE

TRAF4^ENSG00000076604.15

chr17:28750002:+

IRAG1^ENSG00000072952.19

chr11:10594192:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1249:49589:19636

NO_LDAS

0.0017

1.5301

1.9086

"[""INTERCHROMOSOMAL[chr17--chr11]""]"

chr17:28750002-chr11:10594192

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TRAF4--AOC3

1.0

0.0

INCL_NON_REF_SPLICE

TRAF4^ENSG00000076604.15

chr17:28748178:+

AOC3^ENSG00000131471.7

chr17:42851903:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2287:2901:19258

YES_LDAS

0.0034

1.7232

1.8892

"[""INTRACHROMOSOMAL[chr17:14.10Mb]""]"

chr17:28748178-chr17:42851903

False

Read

count

too

low:

FAIL

TRAF4--ACTR1A

1.0

0.0

INCL_NON_REF_SPLICE

TRAF4^ENSG00000076604.15

chr17:28749950:+

ACTR1A^ENSG00000138107.13

chr10:102482304:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1106:25060:16722

NO_LDAS

0.0034

1.7819

1.8062

"[""INTERCHROMOSOMAL[chr17--chr10]""]"

chr17:28749950-chr10:102482304

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TRAF2--PLEKHA8

0.33

0.0

ONLY_REF_SPLICE

TRAF2^ENSG00000127191.18

chr9:136889736:+

PLEKHA8^ENSG00000106086.20

chr7:30045085:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1228:24170:16974

NO_LDAS

0.0011

1.9329

"[""INTERCHROMOSOMAL[chr9--chr7]""]"

chr9:136889736-chr7:30045085

False

Read

count

too

low:

FAIL

TRA2A--NASP

1.0

0.0

ONLY_REF_SPLICE

TRA2A^ENSG00000164548.11

chr7:23531789:-

NASP^ENSG00000132780.17

chr1:45614096:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1147:3192:18782

YES_LDAS

0.0034

1.9086

1.7819

"[""INTERCHROMOSOMAL[chr7--chr1]""]"

chr7:23531789-chr1:45614096

False

Read

count

too

low:

FAIL

TRA2A--C20orf194

1.0

0.0

INCL_NON_REF_SPLICE

TRA2A^ENSG00000164548.11

chr7:23531558:-

C20orf194^ENSG00000088854.13

chr20:3290173:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1464:6728:3298

YES_LDAS

0.0034

1.9329

1.8062

"[""INTERCHROMOSOMAL[chr7--chr20]""]"

chr7:23531558-chr20:3290173

False

Read

count

too

low:

FAIL

TPX2--ZDHHC11

0.33

0.0

INCL_NON_REF_SPLICE

TPX2^ENSG00000088325.16

chr20:31770397:+

ZDHHC11^ENSG00000188818.12

chr5:850774:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1276:50891:21836

NO_LDAS

0.0011

1.6049

1.4256

"[""INTERCHROMOSOMAL[chr20--chr5]""]"

chr20:31770397-chr5:850774

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TPP2--LINC02082

1.0

0.0

INCL_NON_REF_SPLICE

TPP2^ENSG00000134900.12

chr13:102614196:+

LINC02082^ENSG00000242268.3

chr3:168902923:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2396:19486:8384

NO_LDAS

0.0034

1.5329

1.231

"[""INTERCHROMOSOMAL[chr13--chr3]""]"

chr13:102614196-chr3:168902923

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TPP2--HSP90B1

1.0

0.0

ONLY_REF_SPLICE

TPP2^ENSG00000134900.12

chr13:102664925:+

HSP90B1^ENSG00000166598.16

chr12:103946618:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2171:9656:11425

YES_LDAS

0.0034

1.5546

1.9656

"[""INTERCHROMOSOMAL[chr13--chr12]""]"

chr13:102664925-chr12:103946618

False

Read

count

too

low:

FAIL

TPM3P6--STT3B

0.5

0.0

INCL_NON_REF_SPLICE

TPM3P6^ENSG00000250731.1

chr19:53479605:+

STT3B^ENSG00000163527.10

chr3:31622136:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1203:30189:12770

YES_LDAS

0.0017

1.9086

1.8892

"[""INTERCHROMOSOMAL[chr19--chr3]""]"

chr19:53479605-chr3:31622136

False

Read

count

too

low:

FAIL

TPK1--AC241585.1

0.5

0.0

INCL_NON_REF_SPLICE

TPK1^ENSG00000196511.14

chr7:144548491:-

AC241585.1^ENSG00000223612.3

chr1:145233055:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1253:30124:14480

YES_LDAS

0.0017

1.9656

1.7465

"[""INTERCHROMOSOMAL[chr7--chr1]""]"

chr7:144548491-chr1:145233055

False

Read

count

too

low:

FAIL

TP53I3--SLC37A2

0.5

0.0

INCL_NON_REF_SPLICE

TP53I3^ENSG00000115129.14

chr2:24084342:-

SLC37A2^ENSG00000134955.12

chr11:125087007:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2211:24315:22635

NO_LDAS

0.0017

1.371

1.6402

"[""INTERCHROMOSOMAL[chr2--chr11]""]"

chr2:24084342-chr11:125087007

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TONSL-AS1--MYO1E

0.5

0.0

ONLY_REF_SPLICE

TONSL-AS1^ENSG00000232600.3

chr8:144437746:+

MYO1E^ENSG00000157483.9

chr15:59188216:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1311:46369:22243

NO_LDAS

0.0017

1.9656

1.8892

"[""INTERCHROMOSOMAL[chr8--chr15]""]"

chr8:144437746-chr15:59188216

True

pair|recurrent

breakpoints

Blacklisted

FAIL

TOGARAM2--LIG1

1.0

0.0

INCL_NON_REF_SPLICE

TOGARAM2^ENSG00000189350.13

chr2:29051403:+

LIG1^ENSG00000105486.14

chr19:48149800:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1475:12674:13149

NO_LDAS

0.0034

1.9656

1.7819

"[""INTERCHROMOSOMAL[chr2--chr19]""]"

chr2:29051403-chr19:48149800

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TNPO1--ZNF366

1.0

0.0

ONLY_REF_SPLICE

TNPO1^ENSG00000083312.18

chr5:72816752:+

ZNF366^ENSG00000178175.12

chr5:72461510:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1263:17714:26811

YES_LDAS

0.0034

1.7232

1.7968

"[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr5:0.31Mb]""]"

chr5:72816752-chr5:72461510

False

Read

count

too

low:

FAIL

TNPO1--CCDC125

1.0

0.0

ONLY_REF_SPLICE

TNPO1^ENSG00000083312.18

chr5:72855923:+

CCDC125^ENSG00000183323.13

chr5:69303929:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1173:27689:13177

YES_LDAS

0.0034

1.9656

1.8295

"[""INTRACHROMOSOMAL[chr5:3.48Mb]""]"

chr5:72855923-chr5:69303929

False

Read

count

too

low:

FAIL

TNKS--FRY

1.0

0.0

INCL_NON_REF_SPLICE

TNKS^ENSG00000173273.16

chr8:9708492:+

FRY^ENSG00000073910.23

chr13:32187559:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2164:21710:3578

NO_LDAS

0.0034

1.8892

1.8256

"[""INTERCHROMOSOMAL[chr8--chr13]""]"

chr8:9708492-chr13:32187559

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TNIK--ZIC1

1.0

0.0

INCL_NON_REF_SPLICE

TNIK^ENSG00000154310.17

chr3:171140416:-

ZIC1^ENSG00000152977.10

chr3:147410068:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1365:46984:25241

NO_LDAS

0.0034

1.231

0.6998

"[""INTRACHROMOSOMAL[chr3:23.55Mb]""]"

chr3:171140416-chr3:147410068

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TNFSF13--TEX45

1.0

0.0

INCL_NON_REF_SPLICE

TNFSF13^ENSG00000161955.16

chr17:7561055:+

TEX45^ENSG00000198723.11

chr19:7506245:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1146:42437:1841

NO_LDAS

0.0034

1.8892

1.7232

"[""INTERCHROMOSOMAL[chr17--chr19]""]"

chr17:7561055-chr19:7506245

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TNFRSF14-AS1--CRYZL2P

1.0

0.0

ONLY_REF_SPLICE

TNFRSF14-AS1^ENSG00000238164.6

chr1:2555681:-

CRYZL2P^ENSG00000242193.11

chr1:178037801:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2412:35585:16624

YES_LDAS

0.0034

1.9329

1.4566

"[""INTRACHROMOSOMAL[chr1:175.45Mb]""]"

chr1:2555681-chr1:178037801

False

Read

count

too

low:

FAIL

TNFRSF12A--CCNF

1.0

0.0

INCL_NON_REF_SPLICE

TNFRSF12A^ENSG00000006327.14

chr16:3021681:+

CCNF^ENSG00000162063.13

chr16:2456545:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2336:8305:5050

YES_LDAS

0.0034

1.5219

1.8892

"[""INTRACHROMOSOMAL[chr16:0.56Mb]""]"

chr16:3021681-chr16:2456545

False

Read

count

too

low:

FAIL

TNFRSF10A--TENT2

1.0

0.0

ONLY_REF_SPLICE

TNFRSF10A^ENSG00000104689.10

chr8:23224756:-

TENT2^ENSG00000164329.13

chr5:79668892:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2217:49694:6591

YES_LDAS

0.0034

1.7465

1.8295

"[""INTERCHROMOSOMAL[chr8--chr5]""]"

chr8:23224756-chr5:79668892

False

Read

count

too

low:

FAIL

TNFAIP8--CFAP97

1.0

0.0

ONLY_REF_SPLICE

TNFAIP8^ENSG00000145779.8

chr5:119268907:+

CFAP97^ENSG00000164323.14

chr4:185176051:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1462:14033:8945

YES_LDAS

0.0034

1.7232

1.8295

"[""INTERCHROMOSOMAL[chr5--chr4]""]"

chr5:119268907-chr4:185176051

False

Read

count

too

low:

FAIL

TMX2--ISG20L2

1.0

0.0

ONLY_REF_SPLICE

TMX2^ENSG00000213593.10

chr11:57712807:+

ISG20L2^ENSG00000143319.17

chr1:156724348:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1468:3362:2233

YES_LDAS

0.0034

1.8323

1.9086

"[""INTERCHROMOSOMAL[chr11--chr1]""]"

chr11:57712807-chr1:156724348

False

Read

count

too

low:

FAIL

TMUB2--SETD5

1.0

0.0

INCL_NON_REF_SPLICE

TMUB2^ENSG00000168591.16

chr17:44190755:+

SETD5^ENSG00000168137.18

chr3:9477185:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2198:47768:22677

YES_LDAS

0.0034

1.2729

1.6895

"[""INTERCHROMOSOMAL[chr17--chr3]""]"

chr17:44190755-chr3:9477185

False

Read

count

too

low:

FAIL

TMUB2--LINC01855

0.5

0.0

INCL_NON_REF_SPLICE

TMUB2^ENSG00000168591.16

chr17:44190554:+

LINC01855^ENSG00000267517.1

chr19:16066130:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1191:28126:3957

NO_LDAS

0.0017

1.7968

1.3996

"[""INTERCHROMOSOMAL[chr17--chr19]""]"

chr17:44190554-chr19:16066130

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TMTC2--KSR2

1.0

0.0

ONLY_REF_SPLICE

TMTC2^ENSG00000179104.9

chr12:82687669:+

KSR2^ENSG00000171435.14

chr12:117582359:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1124:40592:6100

YES_LDAS

0.0034

1.9899

1.9656

"[""INTRACHROMOSOMAL[chr12:34.32Mb]""]"

chr12:82687669-chr12:117582359

False

Read

count

too

low:

FAIL

TMTC1--TTLL11

1.0

0.0

ONLY_REF_SPLICE

TMTC1^ENSG00000133687.16

chr12:29751666:-

TTLL11^ENSG00000175764.15

chr9:121870748:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2147:11096:21402

YES_LDAS

0.0034

1.8892

1.9899

"[""INTERCHROMOSOMAL[chr12--chr9]""]"

chr12:29751666-chr9:121870748

False

Read

count

too

low:

FAIL

TMSB4X--CST8

0.5

0.0

INCL_NON_REF_SPLICE

TMSB4X^ENSG00000205542.11

chrX:12976069:+

CST8^ENSG00000125815.9

chr20:23491625:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2237:44678:1743

NO_LDAS

0.0017

0.9056

1.4295

"[""INTERCHROMOSOMAL[chrX--chr20]""]"

chrX:12976069-chr20:23491625

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TMSB15B-AS1--ATG4A

1.0

0.0

ONLY_REF_SPLICE

TMSB15B-AS1^ENSG00000231728.5

chrX:103918832:-

ATG4A^ENSG00000101844.18

chrX:108126077:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2194:32616:18347

NO_LDAS

0.0034

1.8062

1.7968

"[""INTRACHROMOSOMAL[chrX:4.17Mb]""]"

chrX:103918832-chrX:108126077

False

Read

count

too

low:

FAIL

TMPRSS2--LPA

0.5

0.0

ONLY_REF_SPLICE

TMPRSS2^ENSG00000184012.14

chr21:41468396:-

LPA^ENSG00000198670.12

chr6:160531890:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1282:4171:20449

NO_LDAS

0.0017

1.9329

1.5546

"[""INTERCHROMOSOMAL[chr21--chr6]""]"

chr21:41468396-chr6:160531890

False

Read

count

too

low:

FAIL

TMLHE--ATP7A

1.0

0.0

ONLY_REF_SPLICE

TMLHE^ENSG00000185973.12

chrX:155612792:-

ATP7A^ENSG00000165240.20

chrX:77988242:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2256:28360:1280

NO_LDAS

0.0034

1.7465

1.8892

"[""INTRACHROMOSOMAL[chrX:77.44Mb]""]"

chrX:155612792-chrX:77988242

False

Read

count

too

low:

FAIL

TMEM67--CEP152

1.0

0.0

INCL_NON_REF_SPLICE

TMEM67^ENSG00000164953.16

chr8:93772611:+

CEP152^ENSG00000103995.14

chr15:48781262:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1273:10700:27273

NO_LDAS

0.0034

1.8323

1.9329

"[""INTERCHROMOSOMAL[chr8--chr15]""]"

chr8:93772611-chr15:48781262

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TMEM62--ACAP1

1.0

0.0

ONLY_REF_SPLICE

TMEM62^ENSG00000137842.7

chr15:43138619:+

ACAP1^ENSG00000072818.12

chr17:7343379:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1156:28733:25774

YES_LDAS

0.0034

1.7968

1.6895

"[""INTERCHROMOSOMAL[chr15--chr17]""]"

chr15:43138619-chr17:7343379

False

Read

count

too

low:

FAIL

TMEM39A--OSBPL1A

1.0

0.0

ONLY_REF_SPLICE

TMEM39A^ENSG00000176142.13

chr3:119468735:-

OSBPL1A^ENSG00000141447.18

chr18:24225198:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1201:37413:13681

NO_LDAS

0.0034

1.6895

1.9656

"[""INTERCHROMOSOMAL[chr3--chr18]""]"

chr3:119468735-chr18:24225198

False

Read

count

too

low:

FAIL

TMEM263--VEZT

1.0

0.0

ONLY_REF_SPLICE

TMEM263^ENSG00000151135.10

chr12:106956065:+

VEZT^ENSG00000028203.18

chr12:95251940:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2359:22560:5078

YES_LDAS

0.0034

1.2729

1.5656

"[""INTRACHROMOSOMAL[chr12:11.65Mb]""]"

chr12:106956065-chr12:95251940

False

Read

count

too

low:

FAIL

TMEM250--C1orf122

1.0

0.0

INCL_NON_REF_SPLICE

TMEM250^ENSG00000238227.8

chr9:136116586:-

C1orf122^ENSG00000197982.14

chr1:37809011:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1184:16209:8651

NO_LDAS

0.0034

1.2867

1.4566

"[""INTERCHROMOSOMAL[chr9--chr1]""]"

chr9:136116586-chr1:37809011

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TMEM245--PSMA4

1.0

0.0

INCL_NON_REF_SPLICE

TMEM245^ENSG00000106771.13

chr9:109119820:-

PSMA4^ENSG00000041357.16

chr15:78548892:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1342:16767:7628

YES_LDAS

0.0034

1.6402

1.9329

"[""INTERCHROMOSOMAL[chr9--chr15]""]"

chr9:109119820-chr15:78548892

False

Read

count

too

low:

FAIL

TMEM238--IDNK

1.0

0.0

INCL_NON_REF_SPLICE

TMEM238^ENSG00000233493.4

chr19:55384026:-

IDNK^ENSG00000148057.16

chr9:83641548:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1484:31111:24653

NO_LDAS

0.0034

1.5058

1.9656

"[""INTERCHROMOSOMAL[chr19--chr9]""]"

chr19:55384026-chr9:83641548

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TMEM214--LINC01089

1.0

0.0

INCL_NON_REF_SPLICE

TMEM214^ENSG00000119777.20

chr2:27040198:+

LINC01089^ENSG00000212694.8

chr12:121796081:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1214:45107:2850

NO_LDAS

0.0034

1.9899

1.7968

"[""INTERCHROMOSOMAL[chr2--chr12]""]"

chr2:27040198-chr12:121796081

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TMEM178A--MAP4K3

1.0

0.0

ONLY_REF_SPLICE

TMEM178A^ENSG00000152154.11

chr2:39666374:+

MAP4K3^ENSG00000011566.15

chr2:39356339:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1218:16072:13317

YES_LDAS

0.0034

1.8892

1.9086

"[""INTRACHROMOSOMAL[chr2:0.23Mb]""]"

chr2:39666374-chr2:39356339

False

Read

count

too

low:

FAIL

TMEM165--ALPK1

1.0

0.0

ONLY_REF_SPLICE

TMEM165^ENSG00000134851.13

chr4:55396396:+

ALPK1^ENSG00000073331.18

chr4:112411827:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2246:45244:9814

YES_LDAS

0.0034

1.5628

1.7056

"[""INTRACHROMOSOMAL[chr4:56.83Mb]""]"

chr4:55396396-chr4:112411827

False

Read

count

too

low:

FAIL

TMEM132A--PLPPR3

0.33

0.0

INCL_NON_REF_SPLICE

TMEM132A^ENSG00000006118.15

chr11:60936343:+

PLPPR3^ENSG00000129951.19

chr19:813400:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2307:40406:6086

YES_LDAS

0.0011

1.231

0.971

"[""INTERCHROMOSOMAL[chr11--chr19]""]"

chr11:60936343-chr19:813400

False

Read

count

too

low:

FAIL

TMEM11--UBE2G2

1.0

0.0

ONLY_REF_SPLICE

TMEM11^ENSG00000178307.10

chr17:21214091:-

UBE2G2^ENSG00000184787.19

chr21:44788095:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1119:39824:24667

YES_LDAS

0.0034

1.5656

1.7465

"[""INTERCHROMOSOMAL[chr17--chr21]""]"

chr17:21214091-chr21:44788095

False

Read

count

too

low:

FAIL

TMCO2--HKDC1

1.0

0.0

ONLY_REF_SPLICE

TMCO2^ENSG00000188800.6

chr1:40247448:+

HKDC1^ENSG00000156510.13

chr10:69232764:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2130:40633:3564

NO_LDAS

0.0034

1.9656

1.9086

"[""INTERCHROMOSOMAL[chr1--chr10]""]"

chr1:40247448-chr10:69232764

False

Read

count

too

low:

FAIL

TMCC1--FNDC3B

1.0

0.0

ONLY_REF_SPLICE

TMCC1^ENSG00000172765.17

chr3:129880309:-

FNDC3B^ENSG00000075420.13

chr3:172226871:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2175:8904:14438

NO_LDAS

0.0034

1.5058

1.9899

"[""INTRACHROMOSOMAL[chr3:42.15Mb]""]"

chr3:129880309-chr3:172226871

False

Read

count

too

low:

FAIL

TMBIM4--MSRB3

1.0

0.0

ONLY_REF_SPLICE

TMBIM4^ENSG00000155957.18

chr12:66169855:-

MSRB3^ENSG00000174099.12

chr12:65326826:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1444:27381:25788

YES_LDAS

0.0034

1.9899

1.7465

"[""ChimerPub"",""INTRACHROMOSOMAL[chr12:0.64Mb]""]"

chr12:66169855-chr12:65326826

False

Read

count

too

low:

FAIL

TMBIM1--BIN1

1.0

0.0

INCL_NON_REF_SPLICE

TMBIM1^ENSG00000135926.15

chr2:218284087:-

BIN1^ENSG00000136717.15

chr2:127064018:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1152:26273:19216

YES_LDAS

0.0034

1.7232

1.7465

"[""INTRACHROMOSOMAL[chr2:91.17Mb]""]"

chr2:218284087-chr2:127064018

False

Read

count

too

low:

FAIL

TLK2P1--AC110079.1

1.0

0.0

INCL_NON_REF_SPLICE

TLK2P1^ENSG00000226049.3

chr17:34039043:-

AC110079.1^ENSG00000260404.3

chr4:118595912:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1453:38020:4979

YES_LDAS

0.0034

1.7465

1.8892

"[""INTERCHROMOSOMAL[chr17--chr4]""]"

chr17:34039043-chr4:118595912

False

Read

count

too

low:

FAIL

TLK1--ZZZ3

1.0

0.0

ONLY_REF_SPLICE

TLK1^ENSG00000198586.14

chr2:171117739:-

ZZZ3^ENSG00000036549.13

chr1:77584655:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2435:29582:23518

YES_LDAS

0.0034

1.8256

1.8323

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:171117739-chr1:77584655

False

Read

count

too

low:

FAIL

TLK1--HAT1

1.0

0.0

ONLY_REF_SPLICE

TLK1^ENSG00000198586.14

chr2:171160290:-

HAT1^ENSG00000128708.13

chr2:171965338:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1273:25092:14424

YES_LDAS

0.0034

1.4566

1.8062

"[""INTRACHROMOSOMAL[chr2:0.69Mb]""]"

chr2:171160290-chr2:171965338

False

Read

count

too

low:

FAIL

TLK1--GORASP2

1.0

0.0

ONLY_REF_SPLICE

TLK1^ENSG00000198586.14

chr2:171160290:-

GORASP2^ENSG00000115806.13

chr2:170948350:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2121:31507:22509

NO_LDAS

0.0034

1.4566

1.8295

"[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_INVERSION:-:+:[23693]""]"

chr2:171160290-chr2:170948350

False

Read

count

too

low:

FAIL

TIE1--SLC35E2A

0.5

0.0

ONLY_REF_SPLICE

TIE1^ENSG00000066056.14

chr1:43301129:+

SLC35E2A^ENSG00000215790.8

chr1:1739704:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2382:51134:13121

YES_LDAS

0.0017

1.7819

"[""INTRACHROMOSOMAL[chr1:41.55Mb]""]"

chr1:43301129-chr1:1739704

False

Read

count

too

low:

FAIL

THOP1--SIRT3

1.0

0.0

INCL_NON_REF_SPLICE

THOP1^ENSG00000172009.15

chr19:2785678:+

SIRT3^ENSG00000142082.15

chr11:223715:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1119:34193:7348

NO_LDAS

0.0034

1.7465

1.9329

"[""INTERCHROMOSOMAL[chr19--chr11]""]"

chr19:2785678-chr11:223715

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

THCAT155--CCDC189

0.5

0.0

INCL_NON_REF_SPLICE

THCAT155^ENSG00000287243.2

chr12:3491160:-

CCDC189^ENSG00000196118.12

chr16:30761601:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2419:2456:2990

NO_LDAS

0.0017

1.7232

1.6402

"[""INTERCHROMOSOMAL[chr12--chr16]""]"

chr12:3491160-chr16:30761601

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TFDP1--AC073850.1

1.0

0.0

INCL_NON_REF_SPLICE

TFDP1^ENSG00000198176.13

chr13:113636700:+

AC073850.1^ENSG00000229436.1

chr7:80662463:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1172:10182:10262

NO_LDAS

0.0034

1.9329

1.9899

"[""INTERCHROMOSOMAL[chr13--chr7]""]"

chr13:113636700-chr7:80662463

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TENT5C--USP40

1.0

0.0

INCL_NON_REF_SPLICE

TENT5C^ENSG00000183508.5

chr1:117624661:+

USP40^ENSG00000085982.14

chr2:233488264:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2189:16347:25676

NO_LDAS

0.0034

1.8256

1.8892

"[""INTERCHROMOSOMAL[chr1--chr2]""]"

chr1:117624661-chr2:233488264

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TENT5A--LINC00551

1.0

0.0

INCL_NON_REF_SPLICE

TENT5A^ENSG00000112773.16

chr6:81749616:-

LINC00551^ENSG00000272274.2

chr13:106714311:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1457:49322:20155

NO_LDAS

0.0034

0.5665

1.9656

"[""INTERCHROMOSOMAL[chr6--chr13]""]"

chr6:81749616-chr13:106714311

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TENM3--DCTD

1.0

0.0

ONLY_REF_SPLICE

TENM3^ENSG00000218336.9

chr4:182144161:+

DCTD^ENSG00000129187.15

chr4:182915575:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1365:27762:11593

YES_LDAS

0.0034

1.6729

1.8892

"[""INTRACHROMOSOMAL[chr4:0.09Mb]"",""LOCAL_INVERSION:+:-:[87036]""]"

chr4:182144161-chr4:182915575

False

Read

count

too

low:

FAIL

TDRD3--DIAPH3

1.0

0.0

ONLY_REF_SPLICE

TDRD3^ENSG00000083544.16

chr13:60467379:+

DIAPH3^ENSG00000139734.19

chr13:59916249:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1136:3136:21710

YES_LDAS

0.0034

1.7819

1.9086

"[""GUO2018CR_TCGA"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr13:0.23Mb]""]"

chr13:60467379-chr13:59916249

False

Read

count

too

low:

FAIL

TCF12--RNF111

1.0

0.0

ONLY_REF_SPLICE

TCF12^ENSG00000140262.18

chr15:56921098:+

RNF111^ENSG00000157450.16

chr15:59089667:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1132:24518:12084

YES_LDAS

0.0034

1.9329

1.9656

"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr15:1.69Mb]""]"

chr15:56921098-chr15:59089667

False

Read

count

too

low:

FAIL

TCAIM--SNRK

1.0

0.0

ONLY_REF_SPLICE

TCAIM^ENSG00000179152.20

chr3:44367708:+

SNRK^ENSG00000163788.14

chr3:43332169:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2209:24016:4069

YES_LDAS

0.0034

1.8323

1.7819

"[""INTRACHROMOSOMAL[chr3:0.91Mb]""]"

chr3:44367708-chr3:43332169

False

Read

count

too

low:

FAIL

TBXAS1--NDUFB2

1.0

0.0

ONLY_REF_SPLICE

TBXAS1^ENSG00000059377.18

chr7:139829479:+

NDUFB2^ENSG00000090266.13

chr7:140702866:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1270:4746:27834

YES_LDAS

0.0034

1.9656

1.3996

"[""INTRACHROMOSOMAL[chr7:0.67Mb]""]"

chr7:139829479-chr7:140702866

False

Read

count

too

low:

FAIL

TBRG1--NEFM

0.33

0.0

INCL_NON_REF_SPLICE

TBRG1^ENSG00000154144.13

chr11:124623181:+

NEFM^ENSG00000104722.14

chr8:24915239:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1267:7909:2261

NO_LDAS

0.0011

1.6895

1.9656

"[""INTERCHROMOSOMAL[chr11--chr8]""]"

chr11:124623181-chr8:24915239

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TBL1XR1--WWTR1

1.0

0.0

ONLY_REF_SPLICE

TBL1XR1^ENSG00000177565.18

chr3:177098466:-

WWTR1^ENSG00000018408.15

chr3:149573000:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1396:36078:2121

YES_LDAS

0.0034

1.9656

1.5546

"[""INTRACHROMOSOMAL[chr3:27.28Mb]""]"

chr3:177098466-chr3:149573000

False

Read

count

too

low:

FAIL

TBL1XR1--ACP3

1.0

0.0

ONLY_REF_SPLICE

TBL1XR1^ENSG00000177565.18

chr3:177197121:-

ACP3^ENSG00000014257.16

chr3:132342552:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1447:31807:15321

YES_LDAS

0.0034

1.8892

"[""INTRACHROMOSOMAL[chr3:44.65Mb]""]"

chr3:177197121-chr3:132342552

False

Read

count

too

low:

FAIL

TBKBP1--ITGA3

1.0

0.0

ONLY_REF_SPLICE

TBKBP1^ENSG00000198933.9

chr17:47699697:+

ITGA3^ENSG00000005884.18

chr17:50064077:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2394:39282:4251

YES_LDAS

0.0034

1.8062

1.5656

"[""INTRACHROMOSOMAL[chr17:2.34Mb]""]"

chr17:47699697-chr17:50064077

False

Read

count

too

low:

FAIL

TBC1D22A--RABGAP1L

1.0

0.0

ONLY_REF_SPLICE

TBC1D22A^ENSG00000054611.14

chr22:46912188:+

RABGAP1L^ENSG00000152061.23

chr1:174969277:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2490:50357:4153

YES_LDAS

0.0034

1.7819

1.4295

"[""INTERCHROMOSOMAL[chr22--chr1]""]"

chr22:46912188-chr1:174969277

False

Read

count

too

low:

FAIL

TAX1BP1--LINC02736

0.33

0.0

INCL_NON_REF_SPLICE

TAX1BP1^ENSG00000106052.13

chr7:27787430:+

LINC02736^ENSG00000279243.3

chr11:65487595:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2388:15311:22257

NO_LDAS

0.0011

1.8062

1.5329

"[""INTERCHROMOSOMAL[chr7--chr11]""]"

chr7:27787430-chr11:65487595

True

pair|recurrent

breakpoints

Blacklisted

FAIL

TAX1BP1--COL6A4P1

0.5

0.0

INCL_NON_REF_SPLICE

TAX1BP1^ENSG00000106052.13

chr7:27785489:+

COL6A4P1^ENSG00000230524.8

chr3:15153725:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1484:49063:10094

NO_LDAS

0.0017

1.7465

1.9899

"[""INTERCHROMOSOMAL[chr7--chr3]""]"

chr7:27785489-chr3:15153725

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TARBP1--SALL3

1.0

0.0

INCL_NON_REF_SPLICE

TARBP1^ENSG00000059588.10

chr1:234478475:-

SALL3^ENSG00000256463.8

chr18:78992763:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1110:34929:22355

NO_LDAS

0.0034

1.3996

1.4295

"[""INTERCHROMOSOMAL[chr1--chr18]""]"

chr1:234478475-chr18:78992763

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

TAPT1--STIM2

1.0

0.0

ONLY_REF_SPLICE

TAPT1^ENSG00000169762.17

chr4:16186535:-

STIM2^ENSG00000109689.19

chr4:26919504:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2357:4131:16007

YES_LDAS

0.0034

1.8295

1.8892

"[""INTRACHROMOSOMAL[chr4:10.63Mb]""]"

chr4:16186535-chr4:26919504

False

Read

count

too

low:

FAIL

TAF3--ZEB1

1.0

0.0

ONLY_REF_SPLICE

TAF3^ENSG00000165632.8

chr10:7818875:+

ZEB1^ENSG00000148516.22

chr10:31461037:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1268:12925:4447

YES_LDAS

0.0034

1.9329

1.2729

"[""INTRACHROMOSOMAL[chr10:23.30Mb]""]"

chr10:7818875-chr10:31461037

False

Read

count

too

low:

FAIL

TAB2--AC087294.1

1.0

0.0

INCL_NON_REF_SPLICE

TAB2^ENSG00000055208.19

chr6:149317882:+

AC087294.1^ENSG00000235530.7

chr17:21214312:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2279:46466:9015

NO_LDAS

0.0034

1.4566

1.231

"[""INTERCHROMOSOMAL[chr6--chr17]""]"

chr6:149317882-chr17:21214312

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SYBU--USP8

1.0

0.0

ONLY_REF_SPLICE

SYBU^ENSG00000147642.17

chr8:109644636:-

USP8^ENSG00000138592.14

chr15:50471633:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1230:9219:29249

YES_LDAS

0.0034

1.8256

1.9656

"[""INTERCHROMOSOMAL[chr8--chr15]""]"

chr8:109644636-chr15:50471633

False

Read

count

too

low:

FAIL

SUPV3L1--FLNB-AS1

1.0

0.0

INCL_NON_REF_SPLICE

SUPV3L1^ENSG00000156502.14

chr10:69208767:+

FLNB-AS1^ENSG00000244161.1

chr3:58163330:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1428:2553:9043

NO_LDAS

0.0034

1.8062

1.5656

"[""INTERCHROMOSOMAL[chr10--chr3]""]"

chr10:69208767-chr3:58163330

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SUPT6H--TK2

1.0

0.0

INCL_NON_REF_SPLICE

SUPT6H^ENSG00000109111.15

chr17:28701729:+

TK2^ENSG00000166548.17

chr16:66546632:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2124:48958:28660

NO_LDAS

0.0034

1.7819

0.9056

"[""INTERCHROMOSOMAL[chr17--chr16]""]"

chr17:28701729-chr16:66546632

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SUPT5H--AC092844.1

1.0

0.0

INCL_NON_REF_SPLICE

SUPT5H^ENSG00000196235.14

chr19:39457742:+

AC092844.1^ENSG00000286836.1

chr2:215183013:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1102:45325:16512

NO_LDAS

0.0034

1.8062

1.5628

"[""INTERCHROMOSOMAL[chr19--chr2]""]"

chr19:39457742-chr2:215183013

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SUPT16H--ARL13B

1.0

0.0

INCL_NON_REF_SPLICE

SUPT16H^ENSG00000092201.10

chr14:21363438:-

ARL13B^ENSG00000169379.17

chr3:94043204:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1176:30893:7095

NO_LDAS

0.0034

1.9329

1.6402

"[""INTERCHROMOSOMAL[chr14--chr3]""]"

chr14:21363438-chr3:94043204

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SUMO3--AL121603.1

1.0

0.0

INCL_NON_REF_SPLICE

SUMO3^ENSG00000184900.16

chr21:44813976:-

AL121603.1^ENSG00000258493.2

chr14:34920873:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2310:28700:12602

NO_LDAS

0.0034

1.8892

"[""INTERCHROMOSOMAL[chr21--chr14]""]"

chr21:44813976-chr14:34920873

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SUMF1--TAMM41

1.0

0.0

INCL_NON_REF_SPLICE

SUMF1^ENSG00000144455.14

chr3:4362039:-

TAMM41^ENSG00000144559.10

chr3:11829864:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1240:42364:22565

YES_LDAS

0.0034

1.8892

1.8323

"[""INTRACHROMOSOMAL[chr3:7.32Mb]""]"

chr3:4362039-chr3:11829864

False

Read

count

too

low:

FAIL

SUMF1--LINC00472

1.0

0.0

INCL_NON_REF_SPLICE

SUMF1^ENSG00000144455.14

chr3:4418010:-

LINC00472^ENSG00000233237.8

chr6:71420692:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2346:34938:13233

NO_LDAS

0.0034

1.9656

1.7465

"[""INTERCHROMOSOMAL[chr3--chr6]""]"

chr3:4418010-chr6:71420692

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SUCLG2--POLA1

1.0

0.0

ONLY_REF_SPLICE

SUCLG2^ENSG00000172340.15

chr3:67609455:-

POLA1^ENSG00000101868.13

chrX:24995805:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1298:26047:9576

YES_LDAS

0.0034

1.9219

1.6729

"[""INTERCHROMOSOMAL[chr3--chrX]""]"

chr3:67609455-chrX:24995805

False

Read

count

too

low:

FAIL

SUCLG2--MYRF

1.0

0.0

INCL_NON_REF_SPLICE

SUCLG2^ENSG00000172340.15

chr3:67495857:-

MYRF^ENSG00000124920.14

chr11:61779058:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2267:36394:19594

YES_LDAS

0.0034

1.8323

1.8892

"[""INTERCHROMOSOMAL[chr3--chr11]""]"

chr3:67495857-chr11:61779058

False

Read

count

too

low:

FAIL

SUCLA2--BIVM

1.0

0.0

ONLY_REF_SPLICE

SUCLA2^ENSG00000136143.16

chr13:48037606:-

BIVM^ENSG00000134897.14

chr13:102821037:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1308:25108:27960

YES_LDAS

0.0034

1.7465

1.9899

"[""INTRACHROMOSOMAL[chr13:54.76Mb]""]"

chr13:48037606-chr13:102821037

False

Read

count

too

low:

FAIL

STX2--RSPH4A

1.0

0.0

INCL_NON_REF_SPLICE

STX2^ENSG00000111450.14

chr12:130806982:-

RSPH4A^ENSG00000111834.13

chr6:116632349:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2166:16492:2275

NO_LDAS

0.0034

1.9086

1.9329

"[""INTERCHROMOSOMAL[chr12--chr6]""]"

chr12:130806982-chr6:116632349

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

STT3B--SERPINE2

1.0

0.0

ONLY_REF_SPLICE

STT3B^ENSG00000163527.10

chr3:31533312:+

SERPINE2^ENSG00000135919.14

chr2:224001922:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2344:33684:14900

YES_LDAS

0.0034

1.9086

1.7819

"[""INTERCHROMOSOMAL[chr3--chr2]""]"

chr3:31533312-chr2:224001922

False

Read

count

too

low:

FAIL

STON1--SORBS1

1.0

0.0

ONLY_REF_SPLICE

STON1^ENSG00000243244.7

chr2:48530829:+

SORBS1^ENSG00000095637.22

chr10:95399189:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2285:6906:17759

YES_LDAS

0.0034

1.9086

1.9329

"[""INTERCHROMOSOMAL[chr2--chr10]""]"

chr2:48530829-chr10:95399189

False

Read

count

too

low:

FAIL

STMN3--VPS52

1.0

0.0

ONLY_REF_SPLICE

STMN3^ENSG00000197457.10

chr20:63653327:-

VPS52^ENSG00000223501.9

chr6:33270283:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2496:21694:4727

YES_LDAS

0.0034

1.8295

1.371

"[""INTERCHROMOSOMAL[chr20--chr6]""]"

chr20:63653327-chr6:33270283

False

Read

count

too

low:

FAIL

STK40--USP19

1.0

0.0

INCL_NON_REF_SPLICE

STK40^ENSG00000196182.11

chr1:36340937:-

USP19^ENSG00000172046.19

chr3:49110850:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2176:17002:10584

YES_LDAS

0.0034

1.9086

"[""INTERCHROMOSOMAL[chr1--chr3]""]"

chr1:36340937-chr3:49110850

False

Read

count

too

low:

FAIL

STK38--EID2

1.0

0.0

INCL_NON_REF_SPLICE

STK38^ENSG00000112079.9

chr6:36547297:-

EID2^ENSG00000176396.11

chr19:39539859:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2340:6275:21962

YES_LDAS

0.0034

1.5219

1.4295

"[""INTERCHROMOSOMAL[chr6--chr19]""]"

chr6:36547297-chr19:39539859

False

Read

count

too

low:

FAIL

STIM2--TBC1D19

1.0

0.0

ONLY_REF_SPLICE

STIM2^ENSG00000109689.19

chr4:26861369:+

TBC1D19^ENSG00000109680.11

chr4:26613169:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1265:48610:26853

YES_LDAS

0.0034

1.9086

1.9899

"[""INTRACHROMOSOMAL[chr4:0.10Mb]""]"

chr4:26861369-chr4:26613169

False

Read

count

too

low:

FAIL

STAT3--CADM3

1.0

0.0

INCL_NON_REF_SPLICE

STAT3^ENSG00000168610.16

chr17:42313463:-

CADM3^ENSG00000162706.13

chr1:159171694:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1251:21573:14662

NO_LDAS

0.0034

1.8062

0.9056

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:42313463-chr1:159171694

True

pair|recurrent

breakpoints

Blacklisted

FAIL

STARD9--KRT18P27

1.0

0.0

INCL_NON_REF_SPLICE

STARD9^ENSG00000159433.12

chr15:42695323:+

KRT18P27^ENSG00000224419.1

chr13:90231043:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1468:47000:17619

NO_LDAS

0.0034

1.9899

1.231

"[""INTERCHROMOSOMAL[chr15--chr13]""]"

chr15:42695323-chr13:90231043

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

STARD10--FCER1A

1.0

0.0

INCL_NON_REF_SPLICE

STARD10^ENSG00000214530.10

chr11:72755701:-

FCER1A^ENSG00000179639.10

chr1:159302353:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1457:3443:29081

NO_LDAS

0.0034

1.8892

"[""INTERCHROMOSOMAL[chr11--chr1]""]"

chr11:72755701-chr1:159302353

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ST7L--LZTS1

1.0

0.0

INCL_NON_REF_SPLICE

ST7L^ENSG00000007341.19

chr1:112618909:-

LZTS1^ENSG00000061337.15

chr8:20249997:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1107:13960:29137

NO_LDAS

0.0034

1.8892

1.5329

"[""INTERCHROMOSOMAL[chr1--chr8]""]"

chr1:112618909-chr8:20249997

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ST6GALNAC5--AL035409.2

1.0

0.0

ONLY_REF_SPLICE

ST6GALNAC5^ENSG00000117069.15

chr1:76868742:+

AL035409.2^ENSG00000288543.1

chr1:77068084:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2368:27754:14662

YES_LDAS

0.0034

1.8062

1.9086

"[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""NEIGHBORS[374]""]"

chr1:76868742-chr1:77068084

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ST3GAL6--GSK3B

1.0

0.0

ONLY_REF_SPLICE

ST3GAL6^ENSG00000064225.12

chr3:98732532:+

GSK3B^ENSG00000082701.17

chr3:119947351:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2290:41620:25928

YES_LDAS

0.0034

1.4566

1.9329

"[""INTRACHROMOSOMAL[chr3:21.00Mb]""]"

chr3:98732532-chr3:119947351

False

Read

count

too

low:

FAIL

ST3GAL1--ZFAT

1.0

0.0

ONLY_REF_SPLICE

ST3GAL1^ENSG00000008513.16

chr8:133499135:-

ZFAT^ENSG00000066827.16

chr8:134532972:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1425:27851:12224

YES_LDAS

0.0034

1.8256

1.5058

"[""INTRACHROMOSOMAL[chr8:0.91Mb]""]"

chr8:133499135-chr8:134532972

False

Read

count

too

low:

FAIL

SSTR5-AS1--SRP9

0.5

0.0

ONLY_REF_SPLICE

SSTR5-AS1^ENSG00000261713.6

chr16:1073087:-

SRP9^ENSG00000143742.14

chr1:225777935:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2379:41814:7628

YES_LDAS

0.0017

1.8295

1.7819

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:1073087-chr1:225777935

False

Read

count

too

low:

FAIL

SSTR5-AS1--RPL35P1

1.0

0.0

INCL_NON_REF_SPLICE

SSTR5-AS1^ENSG00000261713.6

chr16:1064608:-

RPL35P1^ENSG00000237991.3

chr1:236981598:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1337:23159:8805

NO_LDAS

0.0034

1.9656

1.4566

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:1064608-chr1:236981598

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SSTR5-AS1--GAS5

1.0

0.0

INCL_NON_REF_SPLICE

SSTR5-AS1^ENSG00000261713.6

chr16:1064608:-

GAS5^ENSG00000234741.8

chr1:173867390:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1173:2230:14312

YES_LDAS

0.0034

1.9656

1.6895

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:1064608-chr1:173867390

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

SSPOP--SIGLEC1

1.0

0.0

INCL_NON_REF_SPLICE

SSPOP^ENSG00000197558.13

chr7:149797371:+

SIGLEC1^ENSG00000088827.13

chr20:3706706:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2279:31871:9772

NO_LDAS

0.0034

1.8323

"[""INTERCHROMOSOMAL[chr7--chr20]""]"

chr7:149797371-chr20:3706706

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SSH2--UFD1

1.0

0.0

INCL_NON_REF_SPLICE

SSH2^ENSG00000141298.19

chr17:29929938:-

UFD1^ENSG00000070010.19

chr22:19465322:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1431:19680:26124

YES_LDAS

0.0034

1.6402

1.9086

"[""INTERCHROMOSOMAL[chr17--chr22]""]"

chr17:29929938-chr22:19465322

False

Read

count

too

low:

FAIL

SRSF3--HMGN1

1.0

0.0

INCL_NON_REF_SPLICE

SRSF3^ENSG00000112081.17

chr6:36603173:+

HMGN1^ENSG00000205581.11

chr21:39348948:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1169:26839:26979

NO_LDAS

0.0034

1.7465

1.3996

"[""INTERCHROMOSOMAL[chr6--chr21]""]"

chr6:36603173-chr21:39348948

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SRPK1--FXYD3

1.0

0.0

INCL_NON_REF_SPLICE

SRPK1^ENSG00000096063.16

chr6:35869589:-

FXYD3^ENSG00000089356.18

chr19:35123582:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1419:42688:19370

YES_LDAS

0.0034

1.9899

1.7968

"[""INTERCHROMOSOMAL[chr6--chr19]""]"

chr6:35869589-chr19:35123582

False

Read

count

too

low:

FAIL

SRA1--PFDN1

1.0

0.0

ONLY_REF_SPLICE

SRA1^ENSG00000213523.11

chr5:140557147:-

PFDN1^ENSG00000113068.10

chr5:140246057:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1202:47558:27245

YES_LDAS

0.0034

1.9329

1.7968

"[""INTRACHROMOSOMAL[chr5:0.23Mb]""]"

chr5:140557147-chr5:140246057

False

Read

count

too

low:

FAIL

SRA1--CERCAM

1.0

0.0

INCL_NON_REF_SPLICE

SRA1^ENSG00000213523.11

chr5:140552045:-

CERCAM^ENSG00000167123.19

chr9:128434183:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1318:33376:24316

NO_LDAS

0.0034

1.8892

1.8295

"[""INTERCHROMOSOMAL[chr5--chr9]""]"

chr5:140552045-chr9:128434183

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

SPTLC2--PCNX1

1.0

0.0

INCL_NON_REF_SPLICE

SPTLC2^ENSG00000100596.7

chr14:77597186:-

PCNX1^ENSG00000100731.16

chr14:70988570:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1474:11816:3312

YES_LDAS

0.0034

1.1589

1.585

"[""INTRACHROMOSOMAL[chr14:6.39Mb]""]"

chr14:77597186-chr14:70988570

False

Read

count

too

low:

FAIL

SPOUT1--NSMCE2

0.5

0.0

INCL_NON_REF_SPLICE

SPOUT1^ENSG00000198917.13

chr9:128822401:-

NSMCE2^ENSG00000156831.8

chr8:125357743:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2140:6364:16287

NO_LDAS

0.0017

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr9--chr8]""]"

chr9:128822401-chr8:125357743

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SPOPL--DARS1

1.0

0.0

ONLY_REF_SPLICE

SPOPL^ENSG00000144228.9

chr2:138560927:+

DARS1^ENSG00000115866.11

chr2:135907407:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2450:18766:9099

YES_LDAS

0.0034

1.8062

1.8256

"[""INTRACHROMOSOMAL[chr2:2.52Mb]""]"

chr2:138560927-chr2:135907407

False

Read

count

too

low:

FAIL

SPOCK1--CHEK2P3

1.0

0.0

INCL_NON_REF_SPLICE

SPOCK1^ENSG00000152377.14

chr5:136978672:-

CHEK2P3^ENSG00000234898.1

chr2:91963563:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1123:10991:24387

NO_LDAS

0.0034

1.5628

1.8295

"[""INTERCHROMOSOMAL[chr5--chr2]""]"

chr5:136978672-chr2:91963563

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SPNS2--ZNF75A

1.0

0.0

INCL_NON_REF_SPLICE

SPNS2^ENSG00000183018.9

chr17:4499153:+

ZNF75A^ENSG00000162086.16

chr16:3309028:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2272:28813:27595

YES_LDAS

0.0034

1.5546

1.8323

"[""INTERCHROMOSOMAL[chr17--chr16]""]"

chr17:4499153-chr16:3309028

False

Read

count

too

low:

FAIL

SPIB--SPI1

1.0

0.0

INCL_NON_REF_SPLICE

SPIB^ENSG00000269404.7

chr19:50428296:+

SPI1^ENSG00000066336.12

chr11:47355286:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1103:19380:13695

NO_LDAS

0.0034

1.6895

1.9219

"[""INTERCHROMOSOMAL[chr19--chr11]""]"

chr19:50428296-chr11:47355286

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SPATA20--RNU5A-1

1.0

0.0

INCL_NON_REF_SPLICE

SPATA20^ENSG00000006282.21

chr17:50547767:+

RNU5A-1^ENSG00000199568.1

chr15:65296071:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2326:44346:7670

YES_LDAS

0.0034

1.8256

1.7819

"[""INTERCHROMOSOMAL[chr17--chr15]""]"

chr17:50547767-chr15:65296071

False

Read

count

too

low:

FAIL

SPAST--AP005121.2

1.0

0.0

INCL_NON_REF_SPLICE

SPAST^ENSG00000021574.13

chr2:32064246:+

AP005121.2^ENSG00000263821.1

chr18:14979308:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1122:52161:3690

NO_LDAS

0.0034

1.4295

1.5219

"[""INTERCHROMOSOMAL[chr2--chr18]""]"

chr2:32064246-chr18:14979308

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SORBS1--DMAC2L

1.0

0.0

ONLY_REF_SPLICE

SORBS1^ENSG00000095637.22

chr10:95491035:-

DMAC2L^ENSG00000125375.17

chr14:50321483:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2319:45657:3046

YES_LDAS

0.0034

1.7819

1.9656

"[""INTERCHROMOSOMAL[chr10--chr14]""]"

chr10:95491035-chr14:50321483

False

Read

count

too

low:

FAIL

SOBP--PIF1

1.0

0.0

INCL_NON_REF_SPLICE

SOBP^ENSG00000112320.12

chr6:107635469:+

PIF1^ENSG00000140451.13

chr15:64818651:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1489:43982:17549

NO_LDAS

0.0034

1.5546

1.8062

"[""INTERCHROMOSOMAL[chr6--chr15]""]"

chr6:107635469-chr15:64818651

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SNX27--DDHD1

0.14

0.0

INCL_NON_REF_SPLICE

SNX27^ENSG00000143376.14

chr1:151612275:+

DDHD1^ENSG00000100523.16

chr14:53152775:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1358:21363:3452

NO_LDAS

0.0005

0.8366

1.231

"[""INTERCHROMOSOMAL[chr1--chr14]""]"

chr1:151612275-chr14:53152775

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SNX24--SNX2

1.0

0.0

ONLY_REF_SPLICE

SNX24^ENSG00000064652.11

chr5:122845693:+

SNX2^ENSG00000205302.7

chr5:122795266:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2288:47890:13807

YES_LDAS

0.0034

1.7465

1.8256

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr5:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8896]""]"

chr5:122845693-chr5:122795266

True

pair|recurrent

breakpoints

Blacklisted

FAIL

SNX18--KRT20

1.0

0.0

INCL_NON_REF_SPLICE

SNX18^ENSG00000178996.14

chr5:54519350:+

KRT20^ENSG00000171431.4

chr17:40880261:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2369:13143:19538

NO_LDAS

0.0034

1.6895

1.9656

"[""INTERCHROMOSOMAL[chr5--chr17]""]"

chr5:54519350-chr17:40880261

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SNX13--LINC01322

1.0

0.0

INCL_NON_REF_SPLICE

SNX13^ENSG00000071189.21

chr7:17873462:-

LINC01322^ENSG00000244128.7

chr3:165522625:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2478:49208:13681

NO_LDAS

0.0034

1.4716

1.9899

"[""INTERCHROMOSOMAL[chr7--chr3]""]"

chr7:17873462-chr3:165522625

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SNRPB--FAM214A

1.0

0.0

INCL_NON_REF_SPLICE

SNRPB^ENSG00000125835.19

chr20:2463089:-

FAM214A^ENSG00000047346.12

chr15:52611676:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1243:33700:13303

NO_LDAS

0.0034

1.6729

1.9086

"[""INTERCHROMOSOMAL[chr20--chr15]""]"

chr20:2463089-chr15:52611676

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SNHG32--ATL3

1.0

0.0

INCL_NON_REF_SPLICE

SNHG32^ENSG00000204387.14

chr6:31837121:+

ATL3^ENSG00000184743.13

chr11:63631300:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2360:48116:7362

YES_LDAS

0.0034

1.9086

"[""INTERCHROMOSOMAL[chr6--chr11]""]"

chr6:31837121-chr11:63631300

False

Read

count

too

low:

FAIL

SNHG16--RNF157

1.0

0.0

ONLY_REF_SPLICE

SNHG16^ENSG00000163597.15

chr17:76557857:+

RNF157^ENSG00000141576.16

chr17:76212482:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2376:18822:7179

YES_LDAS

0.0034

1.8892

1.9656

"[""INTRACHROMOSOMAL[chr17:0.32Mb]""]"

chr17:76557857-chr17:76212482

False

Read

count

too

low:

FAIL

SNF8--MRPL45

0.5

0.0

ONLY_REF_SPLICE

SNF8^ENSG00000159210.10

chr17:48940924:-

MRPL45^ENSG00000278845.5

chr17:38306533:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2331:10012:4643

YES_LDAS

0.0017

1.8256

1.7968

"[""INTRACHROMOSOMAL[chr17:10.61Mb]""]"

chr17:48940924-chr17:38306533

False

Read

count

too

low:

FAIL

SMYD3--AKT3

1.0

0.0

ONLY_REF_SPLICE

SMYD3^ENSG00000185420.19

chr1:246327201:-

AKT3^ENSG00000117020.19

chr1:243843282:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1120:31896:9421

NO_LDAS

0.0034

1.9219

1.9899

"[""INTRACHROMOSOMAL[chr1:1.90Mb]""]"

chr1:246327201-chr1:243843282

False

Read

count

too

low:

FAIL

SMYD2--MSANTD1

1.0

0.0

INCL_NON_REF_SPLICE

SMYD2^ENSG00000143499.14

chr1:214281427:+

MSANTD1^ENSG00000188981.11

chr4:3245152:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1213:41312:21360

NO_LDAS

0.0034

1.9656

1.4295

"[""INTERCHROMOSOMAL[chr1--chr4]""]"

chr1:214281427-chr4:3245152

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SMARCC1--RNU6-979P

0.2

0.0

INCL_NON_REF_SPLICE

SMARCC1^ENSG00000173473.11

chr3:47610066:-

RNU6-979P^ENSG00000206623.1

chr7:28118186:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1216:38530:14886

YES_LDAS

0.0007

1.6402

1.4716

"[""INTERCHROMOSOMAL[chr3--chr7]""]"

chr3:47610066-chr7:28118186

False

Read

count

too

low:

FAIL

SMARCC1--BPI

1.0

0.0

INCL_NON_REF_SPLICE

SMARCC1^ENSG00000173473.11

chr3:47610066:-

BPI^ENSG00000101425.14

chr20:38307596:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1165:50794:4125

NO_LDAS

0.0034

1.6402

1.5628

"[""INTERCHROMOSOMAL[chr3--chr20]""]"

chr3:47610066-chr20:38307596

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SMARCAD1--PDLIM5

1.0

0.0

ONLY_REF_SPLICE

SMARCAD1^ENSG00000163104.18

chr4:94208584:+

PDLIM5^ENSG00000163110.15

chr4:94618004:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1105:3929:7894

YES_LDAS

0.0034

1.6049

1.9656

"[""INTRACHROMOSOMAL[chr4:0.16Mb]""]"

chr4:94208584-chr4:94618004

False

Read

count

too

low:

FAIL

SLTM--CDC42SE2

1.0

0.0

ONLY_REF_SPLICE

SLTM^ENSG00000137776.17

chr15:58912563:-

CDC42SE2^ENSG00000158985.14

chr5:131385543:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1238:16646:2177

YES_LDAS

0.0034

1.8256

1.5058

"[""INTERCHROMOSOMAL[chr15--chr5]""]"

chr15:58912563-chr5:131385543

False

Read

count

too

low:

FAIL

SLCO2B1--MMADHC-DT

1.0

0.0

INCL_NON_REF_SPLICE

SLCO2B1^ENSG00000137491.15

chr11:75196635:+

MMADHC-DT^ENSG00000231969.2

chr2:149587545:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2180:12116:28772

YES_LDAS

0.0034

1.6729

1.8892

"[""INTERCHROMOSOMAL[chr11--chr2]""]"

chr11:75196635-chr2:149587545

False

Read

count

too

low:

FAIL

SLC8B1--LINC02008

1.0

0.0

INCL_NON_REF_SPLICE

SLC8B1^ENSG00000089060.12

chr12:113298784:-

LINC02008^ENSG00000239440.6

chr3:82417306:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1275:30626:28604

YES_LDAS

0.0034

0.9056

1.053

"[""INTERCHROMOSOMAL[chr12--chr3]""]"

chr12:113298784-chr3:82417306

False

Read

count

too

low:

FAIL

SLC7A5--SMG1P1

0.5

0.0

ONLY_REF_SPLICE

SLC7A5^ENSG00000103257.9

chr16:87868885:-

SMG1P1^ENSG00000237296.9

chr16:22459355:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2372:48343:14424

YES_LDAS

0.0017

1.5301

1.9329

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:65.34Mb]""]"

chr16:87868885-chr16:22459355

True

pair|recurrent

breakpoints

Blacklisted

FAIL

SLC7A5--RRP7BP

0.5

0.0

INCL_NON_REF_SPLICE

SLC7A5^ENSG00000103257.9

chr16:87868928:-

RRP7BP^ENSG00000182841.12

chr22:42573318:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1318:27673:8384

YES_LDAS

0.0017

1.5546

1.8295

"[""INTERCHROMOSOMAL[chr16--chr22]""]"

chr16:87868928-chr22:42573318

False

Read

count

too

low:

FAIL

SLC7A5--DOCK8

1.0

0.0

ONLY_REF_SPLICE

SLC7A5^ENSG00000103257.9

chr16:87851724:-

DOCK8^ENSG00000107099.16

chr9:271627:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2403:1170:15895

YES_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr16--chr9]""]"

chr16:87851724-chr9:271627

False

Read

count

too

low:

FAIL

SLC7A5--DHX16

1.0

0.0

ONLY_REF_SPLICE

SLC7A5^ENSG00000103257.9

chr16:87868885:-

DHX16^ENSG00000204560.10

chr6:30660242:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2111:1186:2527

YES_LDAS

0.0034

1.5301

1.6402

"[""INTERCHROMOSOMAL[chr16--chr6]""]"

chr16:87868885-chr6:30660242

False

Read

count

too

low:

FAIL

SLC6A9--PHOSPHO1

0.5

0.0

INCL_NON_REF_SPLICE

SLC6A9^ENSG00000196517.13

chr1:43991943:-

PHOSPHO1^ENSG00000173868.12

chr17:49223935:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2286:14858:8244

NO_LDAS

0.0017

1.5628

1.2729

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:43991943-chr17:49223935

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC38A7--GOLGA8CP

0.17

0.0

INCL_NON_REF_SPLICE

SLC38A7^ENSG00000103042.9

chr16:58680014:-

GOLGA8CP^ENSG00000181984.11

chr15:20574016:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2143:24954:12252

NO_LDAS

0.0006

1.8256

"[""INTERCHROMOSOMAL[chr16--chr15]""]"

chr16:58680014-chr15:20574016

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC38A7--AL161935.3

0.17

0.0

INCL_NON_REF_SPLICE

SLC38A7^ENSG00000103042.9

chr16:58680014:-

AL161935.3^ENSG00000286694.1

chr10:31608790:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2143:24954:12252

NO_LDAS

0.0006

1.8256

1.7056

"[""INTERCHROMOSOMAL[chr16--chr10]""]"

chr16:58680014-chr10:31608790

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC38A2--YEATS4

1.0

0.0

INCL_NON_REF_SPLICE

SLC38A2^ENSG00000134294.14

chr12:46370772:-

YEATS4^ENSG00000127337.7

chr12:69390153:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1336:30941:21500

NO_LDAS

0.0034

1.6402

1.7465

"[""INTRACHROMOSOMAL[chr12:22.99Mb]""]"

chr12:46370772-chr12:69390153

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC35E2A--PUM2

0.5

0.0

INCL_NON_REF_SPLICE

SLC35E2A^ENSG00000215790.8

chr1:1739438:-

PUM2^ENSG00000055917.16

chr2:20350671:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1179:44856:11944

NO_LDAS

0.0017

1.7819

1.585

"[""INTERCHROMOSOMAL[chr1--chr2]""]"

chr1:1739438-chr2:20350671

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC35E2A--LUC7L

0.5

0.0

ONLY_REF_SPLICE

SLC35E2A^ENSG00000215790.8

chr1:1734690:-

LUC7L^ENSG00000007392.17

chr16:228402:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1228:32171:14886

YES_LDAS

0.0017

1.9329

1.7232

"[""INTERCHROMOSOMAL[chr1--chr16]""]"

chr1:1734690-chr16:228402

False

Read

count

too

low:

FAIL

SLC35D2--XPO4

1.0

0.0

ONLY_REF_SPLICE

SLC35D2^ENSG00000130958.13

chr9:96383477:-

XPO4^ENSG00000132953.17

chr13:20855765:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1170:42664:19552

YES_LDAS

0.0034

1.8892

1.9086

"[""INTERCHROMOSOMAL[chr9--chr13]""]"

chr9:96383477-chr13:20855765

False

Read

count

too

low:

FAIL

SLC35A2--AL137025.1

1.0

0.0

INCL_NON_REF_SPLICE

SLC35A2^ENSG00000102100.16

chrX:48906314:-

AL137025.1^ENSG00000228484.3

chr10:114776097:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2137:26338:5624

NO_LDAS

0.0034

1.3753

1.8892

"[""INTERCHROMOSOMAL[chrX--chr10]""]"

chrX:48906314-chr10:114776097

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC2A8--MTSS2

1.0

0.0

INCL_NON_REF_SPLICE

SLC2A8^ENSG00000136856.18

chr9:127407530:+

MTSS2^ENSG00000132613.15

chr16:70678400:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1304:24696:7067

NO_LDAS

0.0034

1.3996

1.6729

"[""INTERCHROMOSOMAL[chr9--chr16]""]"

chr9:127407530-chr16:70678400

True

pair|recurrent

breakpoints

Blacklisted

FAIL

SLC27A1--IL17RC

1.0

0.0

INCL_NON_REF_SPLICE

SLC27A1^ENSG00000130304.17

chr19:17470559:+

IL17RC^ENSG00000163702.20

chr3:9928305:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1376:20796:13261

NO_LDAS

0.0034

1.3383

1.2419

"[""INTERCHROMOSOMAL[chr19--chr3]""]"

chr19:17470559-chr3:9928305

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC26A6--IL22RA1

1.0

0.0

INCL_NON_REF_SPLICE

SLC26A6^ENSG00000225697.13

chr3:48633937:-

IL22RA1^ENSG00000142677.4

chr1:24137297:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1131:44694:22537

NO_LDAS

0.0034

1.8892

1.7968

"[""INTERCHROMOSOMAL[chr3--chr1]""]"

chr3:48633937-chr1:24137297

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC25A32--WAPL

1.0

0.0

ONLY_REF_SPLICE

SLC25A32^ENSG00000164933.12

chr8:103414784:-

WAPL^ENSG00000062650.20

chr10:86473973:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2167:28700:20449

NO_LDAS

0.0034

1.8892

1.7056

"[""INTERCHROMOSOMAL[chr8--chr10]""]"

chr8:103414784-chr10:86473973

False

Read

count

too

low:

FAIL

SLC25A30--PROM1

1.0

0.0

ONLY_REF_SPLICE

SLC25A30^ENSG00000174032.17

chr13:45405883:-

PROM1^ENSG00000007062.12

chr4:15969368:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1443:16072:14073

NO_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr13--chr4]""]"

chr13:45405883-chr4:15969368

False

Read

count

too

low:

FAIL

SLC25A24--OR6C4

1.0

0.0

INCL_NON_REF_SPLICE

SLC25A24^ENSG00000085491.17

chr1:108199956:-

OR6C4^ENSG00000179626.4

chr12:55552781:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1225:9818:7670

NO_LDAS

0.0034

1.5301

1.2867

"[""INTERCHROMOSOMAL[chr1--chr12]""]"

chr1:108199956-chr12:55552781

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC25A22--AC096645.1

1.0

0.0

INCL_NON_REF_SPLICE

SLC25A22^ENSG00000177542.11

chr11:795020:-

AC096645.1^ENSG00000286383.1

chr1:203996615:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1332:17892:17703

NO_LDAS

0.0034

1.8256

1.2419

"[""INTERCHROMOSOMAL[chr11--chr1]""]"

chr11:795020-chr1:203996615

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC25A13--MTPN

1.0

0.0

ONLY_REF_SPLICE

SLC25A13^ENSG00000004864.14

chr7:96321942:-

MTPN^ENSG00000105887.11

chr7:135951630:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2272:33740:20883

YES_LDAS

0.0034

1.7819

1.8323

"[""INTRACHROMOSOMAL[chr7:39.60Mb]""]"

chr7:96321942-chr7:135951630

False

Read

count

too

low:

FAIL

SLC22A5--DNAI1

1.0

0.0

INCL_NON_REF_SPLICE

SLC22A5^ENSG00000197375.13

chr5:132379509:+

DNAI1^ENSG00000122735.16

chr9:34520866:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2330:43659:9365

NO_LDAS

0.0034

1.5656

1.7968

"[""INTERCHROMOSOMAL[chr5--chr9]""]"

chr5:132379509-chr9:34520866

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC22A3--PDK1

1.0

0.0

INCL_NON_REF_SPLICE

SLC22A3^ENSG00000146477.6

chr6:160348479:+

PDK1^ENSG00000152256.14

chr2:172601522:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1174:51465:22103

YES_LDAS

0.0034

1.8323

1.7056

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:160348479-chr2:172601522

False

Read

count

too

low:

FAIL

SLC22A18AS--TNPO2

1.0

0.0

ONLY_REF_SPLICE

SLC22A18AS^ENSG00000254827.6

chr11:2899396:-

TNPO2^ENSG00000105576.15

chr19:12720990:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1310:32689:21080

YES_LDAS

0.0034

1.9656

1.7819

"[""INTERCHROMOSOMAL[chr11--chr19]""]"

chr11:2899396-chr19:12720990

False

Read

count

too

low:

FAIL

SLC16A7--PAWR

1.0

0.0

INCL_NON_REF_SPLICE

SLC16A7^ENSG00000118596.12

chr12:59787425:+

PAWR^ENSG00000177425.11

chr12:79689839:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1348:23401:20519

NO_LDAS

0.0034

1.9899

1.7819

"[""INTRACHROMOSOMAL[chr12:19.79Mb]""]"

chr12:59787425-chr12:79689839

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SLC12A8--TAF6

1.0

0.0

ONLY_REF_SPLICE

SLC12A8^ENSG00000221955.11

chr3:125107481:-

TAF6^ENSG00000106290.15

chr7:100114268:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2189:21791:8342

NO_LDAS

0.0034

1.8323

1.5058

"[""INTERCHROMOSOMAL[chr3--chr7]""]"

chr3:125107481-chr7:100114268

False

Read

count

too

low:

FAIL

SKAP2--SLC9A9

1.0

0.0

INCL_NON_REF_SPLICE

SKAP2^ENSG00000005020.13

chr7:26690285:-

SLC9A9^ENSG00000181804.15

chr3:143265903:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2407:10295:28842

NO_LDAS

0.0034

1.7465

1.4256

"[""INTERCHROMOSOMAL[chr7--chr3]""]"

chr7:26690285-chr3:143265903

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SIGLEC15--AL358074.1

1.0

0.0

INCL_NON_REF_SPLICE

SIGLEC15^ENSG00000197046.12

chr18:45843665:+

AL358074.1^ENSG00000229582.3

chr9:125744588:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2436:10748:4909

YES_LDAS

0.0034

1.8892

"[""INTERCHROMOSOMAL[chr18--chr9]""]"

chr18:45843665-chr9:125744588

False

Read

count

too

low:

FAIL

SHFL--ZNF747

1.0

0.0

INCL_NON_REF_SPLICE

SHFL^ENSG00000130813.18

chr19:10091630:+

ZNF747^ENSG00000169955.7

chr16:30534445:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2409:44330:10640

NO_LDAS

0.0034

1.8256

1.8295

"[""INTERCHROMOSOMAL[chr19--chr16]""]"

chr19:10091630-chr16:30534445

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SHC2--TMEM79

1.0

0.0

INCL_NON_REF_SPLICE

SHC2^ENSG00000129946.10

chr19:460702:-

TMEM79^ENSG00000163472.19

chr1:156292831:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1118:27349:14634

NO_LDAS

0.0034

1.6402

1.2419

"[""INTERCHROMOSOMAL[chr19--chr1]""]"

chr19:460702-chr1:156292831

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SHC1--TSPYL4

1.0

0.0

INCL_NON_REF_SPLICE

SHC1^ENSG00000160691.19

chr1:154967970:-

TSPYL4^ENSG00000187189.11

chr6:116253860:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1378:36005:3536

NO_LDAS

0.0034

1.6402

1.5546

"[""INTERCHROMOSOMAL[chr1--chr6]""]"

chr1:154967970-chr6:116253860

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SHANK2--GCOM1

1.0

0.0

INCL_NON_REF_SPLICE

SHANK2^ENSG00000162105.20

chr11:70490276:-

GCOM1^ENSG00000137878.17

chr15:57632518:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2295:10328:27525

NO_LDAS

0.0034

1.7968

1.2729

"[""INTERCHROMOSOMAL[chr11--chr15]""]"

chr11:70490276-chr15:57632518

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SH3D19--PSPC1

1.0

0.0

ONLY_REF_SPLICE

SH3D19^ENSG00000109686.19

chr4:151325241:-

PSPC1^ENSG00000121390.19

chr13:19772543:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2493:48084:3887

NO_LDAS

0.0034

1.6895

1.9086

"[""INTERCHROMOSOMAL[chr4--chr13]""]"

chr4:151325241-chr13:19772543

False

Read

count

too

low:

FAIL

SH3D19--PRSS3

0.5

0.0

ONLY_REF_SPLICE

SH3D19^ENSG00000109686.19

chr4:151325241:-

PRSS3^ENSG00000010438.17

chr9:33762057:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2207:28425:8286

YES_LDAS

0.0017

1.6895

1.7056

"[""INTERCHROMOSOMAL[chr4--chr9]""]"

chr4:151325241-chr9:33762057

False

Read

count

too

low:

FAIL

SFMBT2--RSU1

1.0

0.0

ONLY_REF_SPLICE

SFMBT2^ENSG00000198879.12

chr10:7367649:-

RSU1^ENSG00000148484.18

chr10:16695155:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1337:16153:10626

NO_LDAS

0.0034

1.8323

1.7819

"[""INTRACHROMOSOMAL[chr10:9.18Mb]""]"

chr10:7367649-chr10:16695155

False

Read

count

too

low:

FAIL

SESTD1--COBLL1

1.0

0.0

ONLY_REF_SPLICE

SESTD1^ENSG00000187231.14

chr2:179264499:-

COBLL1^ENSG00000082438.18

chr2:164743875:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2110:13685:21486

YES_LDAS

0.0034

1.7819

1.371

"[""INTRACHROMOSOMAL[chr2:14.26Mb]""]"

chr2:179264499-chr2:164743875

False

Read

count

too

low:

FAIL

SESN2--C5orf58

1.0

0.0

INCL_NON_REF_SPLICE

SESN2^ENSG00000130766.5

chr1:28273508:+

C5orf58^ENSG00000234511.10

chr5:170234041:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1211:19963:27988

NO_LDAS

0.0034

1.8892

1.9899

"[""INTERCHROMOSOMAL[chr1--chr5]""]"

chr1:28273508-chr5:170234041

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SERPINB8--STAT1

1.0

0.0

INCL_NON_REF_SPLICE

SERPINB8^ENSG00000166401.15

chr18:63987785:+

STAT1^ENSG00000115415.20

chr2:190991274:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1431:20893:15839

NO_LDAS

0.0034

1.5546

1.8062

"[""INTERCHROMOSOMAL[chr18--chr2]""]"

chr18:63987785-chr2:190991274

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SEPTIN7--ELP1

1.0

0.0

INCL_NON_REF_SPLICE

SEPTIN7^ENSG00000122545.20

chr7:35801270:+

ELP1^ENSG00000070061.16

chr9:108869156:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1454:20861:23322

NO_LDAS

0.0034

1.8256

1.6402

"[""INTERCHROMOSOMAL[chr7--chr9]""]"

chr7:35801270-chr9:108869156

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SEPHS2--RN7SL444P

0.5

0.0

INCL_NON_REF_SPLICE

SEPHS2^ENSG00000179918.19

chr16:30445274:-

RN7SL444P^ENSG00000265753.2

chr1:151300718:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1366:52064:12938

YES_LDAS

0.0017

1.9656

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:30445274-chr1:151300718

False

Read

count

too

low:

FAIL

SEMA6A--TRIM36

1.0

0.0

ONLY_REF_SPLICE

SEMA6A^ENSG00000092421.17

chr5:116574185:-

TRIM36^ENSG00000152503.10

chr5:115147394:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1261:18021:18319

YES_LDAS

0.0034

1.8062

1.9656

"[""INTRACHROMOSOMAL[chr5:1.26Mb]""]"

chr5:116574185-chr5:115147394

False

Read

count

too

low:

FAIL

SEMA5A--NID2

0.33

0.0

INCL_NON_REF_SPLICE

SEMA5A^ENSG00000112902.12

chr5:9379861:-

NID2^ENSG00000087303.18

chr14:52015273:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1360:11566:21290

NO_LDAS

0.0011

1.9329

1.371

"[""INTERCHROMOSOMAL[chr5--chr14]""]"

chr5:9379861-chr14:52015273

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SEMA5A--IGF2BP1

0.33

0.0

INCL_NON_REF_SPLICE

SEMA5A^ENSG00000112902.12

chr5:9379861:-

IGF2BP1^ENSG00000159217.10

chr17:49013986:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1360:11566:21290

NO_LDAS

0.0011

1.9329

1.4566

"[""INTERCHROMOSOMAL[chr5--chr17]""]"

chr5:9379861-chr17:49013986

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SEMA4G--DBIL5P

1.0

0.0

INCL_NON_REF_SPLICE

SEMA4G^ENSG00000095539.15

chr10:100984357:+

DBIL5P^ENSG00000231784.8

chr17:753976:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2264:20643:29501

YES_LDAS

0.0034

1.9086

1.9899

"[""INTERCHROMOSOMAL[chr10--chr17]""]"

chr10:100984357-chr17:753976

False

Read

count

too

low:

FAIL

SEMA4A--SLC25A44

1.0

0.0

INCL_NON_REF_SPLICE

SEMA4A^ENSG00000196189.13

chr1:156176712:+

SLC25A44^ENSG00000160785.13

chr1:156199835:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2262:11161:19300

YES_LDAS

0.0034

1.9086

1.9656

"[""INTRACHROMOSOMAL[chr1:0.02Mb]"",""NEIGHBORS[16180]""]"

chr1:156176712-chr1:156199835

False

Read

count

too

low:

FAIL

SEMA3E--CACNA2D1

1.0

0.0

ONLY_REF_SPLICE

SEMA3E^ENSG00000170381.14

chr7:83648428:-

CACNA2D1^ENSG00000153956.16

chr7:82084900:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2175:49419:27806

YES_LDAS

0.0034

1.9656

1.8323

"[""INTRACHROMOSOMAL[chr7:0.92Mb]""]"

chr7:83648428-chr7:82084900

False

Read

count

too

low:

FAIL

SELENBP1--MYO19

1.0

0.0

INCL_NON_REF_SPLICE

SELENBP1^ENSG00000143416.21

chr1:151365261:-

MYO19^ENSG00000278259.5

chr17:36511448:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2332:9260:18922

NO_LDAS

0.0034

1.9656

1.8892

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:151365261-chr17:36511448

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SELENBP1--AC061975.4

1.0

0.0

INCL_NON_REF_SPLICE

SELENBP1^ENSG00000143416.21

chr1:151369046:-

AC061975.4^ENSG00000264486.1

chr17:28256454:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1113:23725:20043

NO_LDAS

0.0034

1.8892

1.9086

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:151369046-chr17:28256454

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SEL1L3--FRAS1

1.0

0.0

ONLY_REF_SPLICE

SEL1L3^ENSG00000091490.11

chr4:25862675:-

FRAS1^ENSG00000138759.19

chr4:78245233:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2121:27924:18684

NO_LDAS

0.0034

1.7819

1.9086

"[""INTRACHROMOSOMAL[chr4:52.19Mb]""]"

chr4:25862675-chr4:78245233

False

Read

count

too

low:

FAIL

SEC24B-AS1--COL25A1

1.0

0.0

ONLY_REF_SPLICE

SEC24B-AS1^ENSG00000247950.7

chr4:109362752:-

COL25A1^ENSG00000188517.16

chr4:109302075:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2417:12787:17100

YES_LDAS

0.0034

1.7968

1.5058

"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr4:0.04Mb]"",""NEIGHBORS[44723]""]"

chr4:109362752-chr4:109302075

True

pair|recurrent

breakpoints

Blacklisted

FAIL

SEC22A--ITPR2

1.0

0.0

ONLY_REF_SPLICE

SEC22A^ENSG00000121542.12

chr3:123259589:+

ITPR2^ENSG00000123104.12

chr12:26632059:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1319:4179:17128

YES_LDAS

0.0034

1.8892

1.7465

"[""INTERCHROMOSOMAL[chr3--chr12]""]"

chr3:123259589-chr12:26632059

False

Read

count

too

low:

FAIL

SEC14L1--GBF1

1.0

0.0

INCL_NON_REF_SPLICE

SEC14L1^ENSG00000129657.16

chr17:77206289:+

GBF1^ENSG00000107862.6

chr10:102368675:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1359:19793:1939

NO_LDAS

0.0034

1.8323

1.8295

"[""INTERCHROMOSOMAL[chr17--chr10]""]"

chr17:77206289-chr10:102368675

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SEC14L1--EDIL3

1.0

0.0

INCL_NON_REF_SPLICE

SEC14L1^ENSG00000129657.16

chr17:77215569:+

EDIL3^ENSG00000164176.13

chr5:84384780:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2456:51813:16035

YES_LDAS

0.0034

1.6729

1.5219

"[""INTERCHROMOSOMAL[chr17--chr5]""]"

chr17:77215569-chr5:84384780

False

Read

count

too

low:

FAIL

SEC11A--USP14

1.0

0.0

ONLY_REF_SPLICE

SEC11A^ENSG00000140612.14

chr15:84680713:-

USP14^ENSG00000101557.15

chr18:196637:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1232:42939:19524

YES_LDAS

0.0034

1.2419

1.9219

"[""INTERCHROMOSOMAL[chr15--chr18]""]"

chr15:84680713-chr18:196637

False

Read

count

too

low:

FAIL

SDHAP3--DHRSX

1.0

0.0

ONLY_REF_SPLICE

SDHAP3^ENSG00000185986.12

chr5:1584984:-

DHRSX^ENSG00000169084.15

chrX:2221229:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2120:1121:17997

YES_LDAS

0.0034

1.9656

1.8256

"[""INTERCHROMOSOMAL[chr5--chrY]""]"

chr5:1584984-chrX:2221229

False

Read

count

too

low:

FAIL

SDHAP2--SMBD1P

1.0

0.0

INCL_NON_REF_SPLICE

SDHAP2^ENSG00000215837.7

chr3:195683865:+

SMBD1P^ENSG00000283426.1

chr3:195708134:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1422:5336:12854

NO_LDAS

0.0034

1.8295

"[""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[15714]""]"

chr3:195683865-chr3:195708134

True

pair|recurrent

breakpoints

Blacklisted

FAIL

SCUBE3--USP11

1.0

0.0

INCL_NON_REF_SPLICE

SCUBE3^ENSG00000146197.9

chr6:35249201:+

USP11^ENSG00000102226.10

chrX:47247952:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1114:3726:8805

NO_LDAS

0.0034

1.9329

0.0

"[""INTERCHROMOSOMAL[chr6--chrX]""]"

chr6:35249201-chrX:47247952

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SCARNA13--CEACAM1

1.0

0.0

INCL_NON_REF_SPLICE

SCARNA13^ENSG00000252481.1

chr14:95533415:-

CEACAM1^ENSG00000079385.23

chr19:42515099:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2355:25141:4867

YES_LDAS

0.0034

1.8892

1.7819

"[""INTERCHROMOSOMAL[chr14--chr19]""]"

chr14:95533415-chr19:42515099

False

Read

count

too

low:

FAIL

SCAMP3--DDC

1.0

0.0

INCL_NON_REF_SPLICE

SCAMP3^ENSG00000116521.11

chr1:155261657:-

DDC^ENSG00000132437.18

chr7:50492790:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2294:22139:19734

NO_LDAS

0.0034

1.9219

1.8892

"[""INTERCHROMOSOMAL[chr1--chr7]""]"

chr1:155261657-chr7:50492790

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SCAF8--AL691432.4

1.0

0.0

INCL_NON_REF_SPLICE

SCAF8^ENSG00000213079.10

chr6:154733845:+

AL691432.4^ENSG00000286989.1

chr1:1601320:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1375:51627:9856

NO_LDAS

0.0034

1.4256

1.9219

"[""INTERCHROMOSOMAL[chr6--chr1]""]"

chr6:154733845-chr1:1601320

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SBNO1--RAB10

1.0

0.0

ONLY_REF_SPLICE

SBNO1^ENSG00000139697.14

chr12:123364701:-

RAB10^ENSG00000084733.11

chr2:26127144:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2193:42308:1645

NO_LDAS

0.0034

1.7465

1.9219

"[""INTERCHROMOSOMAL[chr12--chr2]""]"

chr12:123364701-chr2:26127144

False

Read

count

too

low:

FAIL

SAXO1--CCAR1

0.33

0.0

INCL_NON_REF_SPLICE

SAXO1^ENSG00000155875.15

chr9:19049219:-

CCAR1^ENSG00000060339.14

chr10:68742405:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1168:47582:20477

NO_LDAS

0.0011

1.7819

1.6895

"[""INTERCHROMOSOMAL[chr9--chr10]""]"

chr9:19049219-chr10:68742405

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SART3--ZGPAT

0.5

0.0

INCL_NON_REF_SPLICE

SART3^ENSG00000075856.12

chr12:108560910:-

ZGPAT^ENSG00000197114.12

chr20:63708945:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1112:15878:14606

NO_LDAS

0.0017

1.7056

1.231

"[""INTERCHROMOSOMAL[chr12--chr20]""]"

chr12:108560910-chr20:63708945

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SAP130--UBN2

1.0

0.0

ONLY_REF_SPLICE

SAP130^ENSG00000136715.19

chr2:127986785:-

UBN2^ENSG00000157741.15

chr7:139237005:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2248:36669:10178

NO_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr2--chr7]""]"

chr2:127986785-chr7:139237005

False

Read

count

too

low:

FAIL

SAP130--FLT3LG

1.0

0.0

INCL_NON_REF_SPLICE

SAP130^ENSG00000136715.19

chr2:128017713:-

FLT3LG^ENSG00000090554.13

chr19:49480342:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1254:41450:17282

NO_LDAS

0.0034

1.7465

1.4566

"[""INTERCHROMOSOMAL[chr2--chr19]""]"

chr2:128017713-chr19:49480342

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

SAMD12--CPB2-AS1

1.0

0.0

INCL_NON_REF_SPLICE

SAMD12^ENSG00000177570.15

chr8:118580840:-

CPB2-AS1^ENSG00000235903.9

chr13:46120638:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1331:28425:4419

NO_LDAS

0.0034

1.9656

"[""INTERCHROMOSOMAL[chr8--chr13]""]"

chr8:118580840-chr13:46120638

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RWDD1--NUS1

1.0

0.0

ONLY_REF_SPLICE

RWDD1^ENSG00000111832.13

chr6:116574171:+

NUS1^ENSG00000153989.8

chr6:117703605:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1112:18434:23266

YES_LDAS

0.0034

1.9899

1.8892

"[""INTRACHROMOSOMAL[chr6:1.08Mb]""]"

chr6:116574171-chr6:117703605

False

Read

count

too

low:

FAIL

RTRAF--NIF3L1

1.0

0.0

INCL_NON_REF_SPLICE

RTRAF^ENSG00000087302.9

chr14:51991342:+

NIF3L1^ENSG00000196290.16

chr2:200893372:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1237:48990:1813

NO_LDAS

0.0034

1.7819

"[""INTERCHROMOSOMAL[chr14--chr2]""]"

chr14:51991342-chr2:200893372

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RTL5--HOXA10-AS

0.5

0.0

INCL_NON_REF_SPLICE

RTL5^ENSG00000242732.4

chrX:72130111:-

HOXA10-AS^ENSG00000253187.2

chr7:27171846:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2138:23199:26222

NO_LDAS

0.0017

1.9086

1.4566

"[""INTERCHROMOSOMAL[chrX--chr7]""]"

chrX:72130111-chr7:27171846

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RTCB--NDUFC2

1.0

0.0

INCL_NON_REF_SPLICE

RTCB^ENSG00000100220.12

chr22:32406633:-

NDUFC2^ENSG00000151366.13

chr11:78068526:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1363:18580:24443

YES_LDAS

0.0034

1.9656

1.7056

"[""INTERCHROMOSOMAL[chr22--chr11]""]"

chr22:32406633-chr11:78068526

False

Read

count

too

low:

FAIL

RSRP1--RNF128

1.0

0.0

INCL_NON_REF_SPLICE

RSRP1^ENSG00000117616.18

chr1:25246710:-

RNF128^ENSG00000133135.14

chrX:106727111:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1222:17318:6058

YES_LDAS

0.0034

1.9086

1.7232

"[""INTERCHROMOSOMAL[chr1--chrX]""]"

chr1:25246710-chrX:106727111

False

Read

count

too

low:

FAIL

RSF1--EPC2

1.0

0.0

ONLY_REF_SPLICE

RSF1^ENSG00000048649.13

chr11:77764598:-

EPC2^ENSG00000135999.12

chr2:148770792:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1402:14729:17044

NO_LDAS

0.0034

1.6895

1.9656

"[""INTERCHROMOSOMAL[chr11--chr2]""]"

chr11:77764598-chr2:148770792

False

Read

count

too

low:

FAIL

RRP15--PLCG1

1.0

0.0

INCL_NON_REF_SPLICE

RRP15^ENSG00000067533.6

chr1:218307434:+

PLCG1^ENSG00000124181.14

chr20:41159798:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2270:2003:18599

NO_LDAS

0.0034

1.9329

1.8295

"[""INTERCHROMOSOMAL[chr1--chr20]""]"

chr1:218307434-chr20:41159798

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RRM2--ASXL2

1.0

0.0

ONLY_REF_SPLICE

RRM2^ENSG00000171848.16

chr2:10141954:+

ASXL2^ENSG00000143970.17

chr2:25845563:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1149:37543:18669

YES_LDAS

0.0034

1.7968

"[""INTRACHROMOSOMAL[chr2:15.52Mb]""]"

chr2:10141954-chr2:25845563

False

Read

count

too

low:

FAIL

RPSA--HBD

1.0

0.0

INCL_NON_REF_SPLICE

RPSA^ENSG00000168028.14

chr3:39412019:+

HBD^ENSG00000223609.11

chr11:5234104:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1436:29582:7516

NO_LDAS

0.0034

1.9656

1.7819

"[""INTERCHROMOSOMAL[chr3--chr11]""]"

chr3:39412019-chr11:5234104

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RPS7--COLEC11

0.33

0.0

ONLY_REF_SPLICE

RPS7^ENSG00000171863.15

chr2:3580260:+

COLEC11^ENSG00000118004.18

chr2:3637533:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1322:7132:13443

YES_LDAS

0.0011

1.7968

1.6895

"[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""NEIGHBORS[13912]""]"

chr2:3580260-chr2:3637533

True

pair|recurrent

breakpoints;

read_through|ribosomal

genes|RPS7

Blacklisted

FAIL

RPS6--NOP14-AS1

1.0

0.0

INCL_NON_REF_SPLICE

RPS6^ENSG00000137154.13

chr9:19378708:-

NOP14-AS1^ENSG00000249673.7

chr4:2951080:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1173:6962:19510

NO_LDAS

0.0034

1.3996

0.9183

"[""INTERCHROMOSOMAL[chr9--chr4]""]"

chr9:19378708-chr4:2951080

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RPL7A--RPL7AP28

0.2

0.0

INCL_NON_REF_SPLICE

RPL7A^ENSG00000148303.17

chr9:133350000:+

RPL7AP28^ENSG00000184139.8

chr4:131857572:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2240:9414:18459

NO_LDAS

0.0007

1.5058

1.9656

"[""INTERCHROMOSOMAL[chr9--chr4]""]"

chr9:133350000-chr4:131857572

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RPL7A--AC092506.1

0.2

0.0

INCL_NON_REF_SPLICE

RPL7A^ENSG00000148303.17

chr9:133350000:+

AC092506.1^ENSG00000215869.4

chr1:104073280:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2240:9414:18459

NO_LDAS

0.0007

1.5058

1.9656

"[""INTERCHROMOSOMAL[chr9--chr1]""]"

chr9:133350000-chr1:104073280

True

pair|recurrent

breakpoints

Blacklisted

FAIL

RPL32P32--RPL32

1.0

0.0

INCL_NON_REF_SPLICE

RPL32P32^ENSG00000241157.1

chr17:60245622:-

RPL32^ENSG00000144713.13

chr3:12840210:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1494:34209:1154

NO_LDAS

0.0034

1.9656

1.8323

"[""INTERCHROMOSOMAL[chr17--chr3]""]"

chr17:60245622-chr3:12840210

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

RPL27A--AC233300.1

0.5

0.0

INCL_NON_REF_SPLICE

RPL27A^ENSG00000166441.13

chr11:8685797:+

AC233300.1^ENSG00000279155.1

chrX:48940663:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1170:5627:21038

NO_LDAS

0.0017

1.5301

1.8892

"[""INTERCHROMOSOMAL[chr11--chrX]""]"

chr11:8685797-chrX:48940663

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RPL26P34--RPL26

0.5

0.0

INCL_NON_REF_SPLICE

RPL26P34^ENSG00000225404.2

chr13:24704337:-

RPL26^ENSG00000161970.15

chr17:8382201:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1341:30779:23069

NO_LDAS

0.0017

1.6895

1.8323

"[""INTERCHROMOSOMAL[chr13--chr17]""]"

chr13:24704337-chr17:8382201

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RPL10P19--ERI1

1.0

0.0

INCL_NON_REF_SPLICE

RPL10P19^ENSG00000233609.3

chr8:8963701:+

ERI1^ENSG00000104626.15

chr8:9002681:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1328:30237:25942

YES_LDAS

0.0034

1.8256

1.7819

"[""INTRACHROMOSOMAL[chr8:0.02Mb]"",""NEIGHBORS[23122]""]"

chr8:8963701-chr8:9002681

True

pair|recurrent

breakpoints;

read_through|ribosomal

genes|RPL10P19

Blacklisted

FAIL

RORA--KLHL25

1.0

0.0

ONLY_REF_SPLICE

RORA^ENSG00000069667.16

chr15:60592387:-

KLHL25^ENSG00000183655.13

chr15:85769820:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1473:4390:20211

NO_LDAS

0.0034

1.9086

1.9219

"[""INTRACHROMOSOMAL[chr15:24.53Mb]""]"

chr15:60592387-chr15:85769820

False

Read

count

too

low:

FAIL

ROCK2--AC013477.1

1.0

0.0

ONLY_REF_SPLICE

ROCK2^ENSG00000134318.14

chr2:11343996:-

AC013477.1^ENSG00000288637.1

chr4:153408971:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1435:15085:25339

NO_LDAS

0.0034

1.7968

1.6729

"[""INTERCHROMOSOMAL[chr2--chr4]""]"

chr2:11343996-chr4:153408971

False

Read

count

too

low:

FAIL

ROBO2--CTNND1

1.0

0.0

ONLY_REF_SPLICE

ROBO2^ENSG00000185008.17

chr3:76311417:+

CTNND1^ENSG00000198561.15

chr11:57791492:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1227:32988:25522

YES_LDAS

0.0034

1.7968

1.8295

"[""INTERCHROMOSOMAL[chr3--chr11]""]"

chr3:76311417-chr11:57791492

False

Read

count

too

low:

FAIL

ROBO2--AC016629.2

1.0

0.0

INCL_NON_REF_SPLICE

ROBO2^ENSG00000185008.17

chr3:76311417:+

AC016629.2^ENSG00000269600.2

chr19:58599353:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1109:15028:11817

YES_LDAS

0.0034

1.7968

1.8323

"[""INTERCHROMOSOMAL[chr3--chr19]""]"

chr3:76311417-chr19:58599353

False

Read

count

too

low:

FAIL

RNMT--VAPA

1.0

0.0

ONLY_REF_SPLICE

RNMT^ENSG00000101654.18

chr18:13731934:+

VAPA^ENSG00000101558.14

chr18:9936986:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1134:28126:25900

YES_LDAS

0.0034

1.6729

1.5329

"[""INTRACHROMOSOMAL[chr18:3.77Mb]""]"

chr18:13731934-chr18:9936986

False

Read

count

too

low:

FAIL

RNF217--EXOC4

1.0

0.0

ONLY_REF_SPLICE

RNF217^ENSG00000146373.16

chr6:124963426:+

EXOC4^ENSG00000131558.15

chr7:133475328:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1367:12852:24751

YES_LDAS

0.0034

1.8892

1.9086

"[""INTERCHROMOSOMAL[chr6--chr7]""]"

chr6:124963426-chr7:133475328

False

Read

count

too

low:

FAIL

RNF216--RABGEF1

1.0

0.0

ONLY_REF_SPLICE

RNF216^ENSG00000011275.19

chr7:5711761:-

RABGEF1^ENSG00000154710.18

chr7:66771883:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2378:48383:26180

YES_LDAS

0.0034

1.8892

1.7819

"[""INTRACHROMOSOMAL[chr7:60.90Mb]""]"

chr7:5711761-chr7:66771883

False

Read

count

too

low:

FAIL

RNF216--HERC4

1.0

0.0

ONLY_REF_SPLICE

RNF216^ENSG00000011275.19

chr7:5711761:-

HERC4^ENSG00000148634.16

chr10:68044563:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1161:18078:10991

YES_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr7--chr10]""]"

chr7:5711761-chr10:68044563

False

Read

count

too

low:

FAIL

RNF19A--ZNF831

1.0

0.0

ONLY_REF_SPLICE

RNF19A^ENSG00000034677.13

chr8:100287501:-

ZNF831^ENSG00000124203.6

chr20:59206905:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1482:22439:3830

YES_LDAS

0.0034

1.9656

1.8062

"[""INTERCHROMOSOMAL[chr8--chr20]""]"

chr8:100287501-chr20:59206905

False

Read

count

too

low:

FAIL

RNF185--ARMCX2

1.0

0.0

INCL_NON_REF_SPLICE

RNF185^ENSG00000138942.16

chr22:31160207:+

ARMCX2^ENSG00000184867.14

chrX:101657305:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2225:10320:17899

NO_LDAS

0.0034

1.7232

1.8323

"[""INTERCHROMOSOMAL[chr22--chrX]""]"

chr22:31160207-chrX:101657305

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RNF169--GAB2

1.0

0.0

ONLY_REF_SPLICE

RNF169^ENSG00000166439.6

chr11:74749382:+

GAB2^ENSG00000033327.13

chr11:78280901:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2398:16517:21962

NO_LDAS

0.0034

1.7056

1.8256

"[""INTRACHROMOSOMAL[chr11:3.37Mb]""]"

chr11:74749382-chr11:78280901

False

Read

count

too

low:

FAIL

RNF169--FP236383.11

0.33

0.0

INCL_NON_REF_SPLICE

RNF169^ENSG00000166439.6

chr11:74749020:+

FP236383.11^ENSG00000286149.1

chr21:8462703:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2361:36070:21024

YES_LDAS

0.0011

1.7819

1.7465

"[""INTERCHROMOSOMAL[chr11--chr21]""]"

chr11:74749020-chr21:8462703

False

Read

count

too

low:

FAIL

RNF144A--GMNC

1.0

0.0

INCL_NON_REF_SPLICE

RNF144A^ENSG00000151692.15

chr2:7075614:+

GMNC^ENSG00000205835.9

chr3:190855764:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2276:28927:9828

NO_LDAS

0.0034

1.8062

"[""INTERCHROMOSOMAL[chr2--chr3]""]"

chr2:7075614-chr3:190855764

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RNF11--EPS15

1.0

0.0

ONLY_REF_SPLICE

RNF11^ENSG00000123091.5

chr1:51236879:+

EPS15^ENSG00000085832.17

chr1:51481314:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1407:46514:14396

YES_LDAS

0.0034

1.8295

1.8256

"[""INTRACHROMOSOMAL[chr1:0.08Mb]"",""LOCAL_INVERSION:+:-:[80816]""]"

chr1:51236879-chr1:51481314

False

Read

count

too

low:

FAIL

RNF10--DYRK1B

1.0

0.0

ONLY_REF_SPLICE

RNF10^ENSG00000022840.16

chr12:120566980:+

DYRK1B^ENSG00000105204.14

chr19:39831968:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1255:31766:4994

YES_LDAS

0.0034

1.9656

1.7465

"[""INTERCHROMOSOMAL[chr12--chr19]""]"

chr12:120566980-chr19:39831968

False

Read

count

too

low:

FAIL

RNASEK--TTC34

1.0

0.0

INCL_NON_REF_SPLICE

RNASEK^ENSG00000219200.12

chr17:7014468:+

TTC34^ENSG00000215912.12

chr1:2637027:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1203:39727:10682

NO_LDAS

0.0034

1.4256

1.7056

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:7014468-chr1:2637027

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RNASEH2C--TUB

1.0

0.0

INCL_NON_REF_SPLICE

RNASEH2C^ENSG00000172922.11

chr11:65720338:-

TUB^ENSG00000166402.9

chr11:8081443:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1206:19397:11369

NO_LDAS

0.0034

1.7465

0.971

"[""INTRACHROMOSOMAL[chr11:57.61Mb]""]"

chr11:65720338-chr11:8081443

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RN7SL617P--CYP51A1

0.25

0.0

INCL_NON_REF_SPLICE

RN7SL617P^ENSG00000241162.3

chr6:110440111:-

CYP51A1^ENSG00000001630.17

chr7:92112801:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1479:24081:12308

NO_LDAS

0.0009

1.8323

1.7232

"[""INTERCHROMOSOMAL[chr6--chr7]""]"

chr6:110440111-chr7:92112801

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RN7SL40P--CYP51A1

0.25

0.0

INCL_NON_REF_SPLICE

RN7SL40P^ENSG00000242696.3

chr2:202357225:-

CYP51A1^ENSG00000001630.17

chr7:92112801:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1479:24081:12308

NO_LDAS

0.0009

1.7819

1.7232

"[""INTERCHROMOSOMAL[chr2--chr7]""]"

chr2:202357225-chr7:92112801

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RN7SL408P--CYP51A1

0.25

0.0

INCL_NON_REF_SPLICE

RN7SL408P^ENSG00000266875.2

chr6:134133764:+

CYP51A1^ENSG00000001630.17

chr7:92112801:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1479:24081:12308

NO_LDAS

0.0009

1.7819

1.7232

"[""INTERCHROMOSOMAL[chr6--chr7]""]"

chr6:134133764-chr7:92112801

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RN7SKP98--RN7SKP186

0.33

0.0

INCL_NON_REF_SPLICE

RN7SKP98^ENSG00000252879.1

chr1:212099553:-

RN7SKP186^ENSG00000202241.1

chr6:30864437:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2339:21662:4699

NO_LDAS

0.0011

1.7968

1.9329

"[""INTERCHROMOSOMAL[chr1--chr6]""]"

chr1:212099553-chr6:30864437

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RN7SKP25--RN7SKP186

0.33

0.0

INCL_NON_REF_SPLICE

RN7SKP25^ENSG00000199319.1

chr3:142673837:+

RN7SKP186^ENSG00000202241.1

chr6:30864437:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2339:21662:4699

NO_LDAS

0.0011

1.7968

1.9329

"[""INTERCHROMOSOMAL[chr3--chr6]""]"

chr3:142673837-chr6:30864437

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RN7SKP166--RN7SKP186

0.33

0.0

INCL_NON_REF_SPLICE

RN7SKP166^ENSG00000222744.1

chr12:66292920:+

RN7SKP186^ENSG00000202241.1

chr6:30864437:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2339:21662:4699

NO_LDAS

0.0011

1.7968

1.9329

"[""INTERCHROMOSOMAL[chr12--chr6]""]"

chr12:66292920-chr6:30864437

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RIOX1--NACC2

1.0

0.0

INCL_NON_REF_SPLICE

RIOX1^ENSG00000170468.8

chr14:73491413:+

NACC2^ENSG00000148411.8

chr9:136050317:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2333:31613:14087

NO_LDAS

0.0034

1.231

1.5058

"[""INTERCHROMOSOMAL[chr14--chr9]""]"

chr14:73491413-chr9:136050317

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RIF1--RGPD5

1.0

0.0

ONLY_REF_SPLICE

RIF1^ENSG00000080345.18

chr2:151411338:+

RGPD5^ENSG00000015568.13

chr2:109801783:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1152:24170:4307

YES_LDAS

0.0034

1.6895

1.6402

"[""INTRACHROMOSOMAL[chr2:41.55Mb]""]"

chr2:151411338-chr2:109801783

False

Read

count

too

low:

FAIL

RHPN1--HSF5

1.0

0.0

INCL_NON_REF_SPLICE

RHPN1^ENSG00000158106.14

chr8:143377455:+

HSF5^ENSG00000176160.11

chr17:58420405:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2227:24388:26544

NO_LDAS

0.0034

1.9656

1.8256

"[""INTERCHROMOSOMAL[chr8--chr17]""]"

chr8:143377455-chr17:58420405

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RHOU--PITX1

1.0

0.0

INCL_NON_REF_SPLICE

RHOU^ENSG00000116574.6

chr1:228735937:+

PITX1^ENSG00000069011.16

chr5:135031350:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2219:34962:7390

YES_LDAS

0.0034

1.8062

1.7465

"[""INTERCHROMOSOMAL[chr1--chr5]""]"

chr1:228735937-chr5:135031350

False

Read

count

too

low:

FAIL

RGS1--AC097717.1

1.0

0.0

INCL_NON_REF_SPLICE

RGS1^ENSG00000090104.12

chr1:192579479:+

AC097717.1^ENSG00000232732.11

chr2:199909202:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1184:23814:23644

NO_LDAS

0.0034

1.9656

1.7232

"[""INTERCHROMOSOMAL[chr1--chr2]""]"

chr1:192579479-chr2:199909202

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RGN--CCSER2

1.0

0.0

ONLY_REF_SPLICE

RGN^ENSG00000130988.13

chrX:47084600:+

CCSER2^ENSG00000107771.17

chr10:84513449:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2258:38457:16273

YES_LDAS

0.0034

1.8323

1.9086

"[""INTERCHROMOSOMAL[chrX--chr10]""]"

chrX:47084600-chr10:84513449

False

Read

count

too

low:

FAIL

RFX5--PRRT1

1.0

0.0

INCL_NON_REF_SPLICE

RFX5^ENSG00000143390.18

chr1:151346201:-

PRRT1^ENSG00000204314.12

chr6:32149545:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1333:3427:7390

NO_LDAS

0.0034

1.9656

1.7232

"[""INTERCHROMOSOMAL[chr1--chr6]""]"

chr1:151346201-chr6:32149545

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

REXO5--CD33

1.0

0.0

ONLY_REF_SPLICE

REXO5^ENSG00000005189.20

chr16:20807363:+

CD33^ENSG00000105383.15

chr19:51239518:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2340:48674:17044

NO_LDAS

0.0034

1.7465

1.371

"[""INTERCHROMOSOMAL[chr16--chr19]""]"

chr16:20807363-chr19:51239518

True

pair|recurrent

breakpoints

Blacklisted

FAIL

REV1--SGPL1

1.0

0.0

ONLY_REF_SPLICE

REV1^ENSG00000135945.10

chr2:99489817:-

SGPL1^ENSG00000166224.17

chr10:70844473:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1327:32203:12392

YES_LDAS

0.0034

1.4566

1.9656

"[""INTERCHROMOSOMAL[chr2--chr10]""]"

chr2:99489817-chr10:70844473

False

Read

count

too

low:

FAIL

REPS2--NHS

1.0

0.0

ONLY_REF_SPLICE

REPS2^ENSG00000169891.18

chrX:16947134:+

NHS^ENSG00000188158.16

chrX:17687742:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1229:42502:25325

YES_LDAS

0.0034

1.8256

1.8295

"[""INTRACHROMOSOMAL[chrX:0.22Mb]""]"

chrX:16947134-chrX:17687742

False

Read

count

too

low:

FAIL

REPIN1-AS1--MTND4P12

1.0

0.0

INCL_NON_REF_SPLICE

REPIN1-AS1^ENSG00000240449.1

chr7:150372379:-

MTND4P12^ENSG00000247627.2

chr5:134927087:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1428:10837:26222

NO_LDAS

0.0034

1.8892

1.9219

"[""INTERCHROMOSOMAL[chr7--chr5]""]"

chr7:150372379-chr5:134927087

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RENBP--MYO5C

1.0

0.0

INCL_NON_REF_SPLICE

RENBP^ENSG00000102032.13

chrX:153942501:-

MYO5C^ENSG00000128833.13

chr15:52193069:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1253:51482:27231

YES_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chrX--chr15]""]"

chrX:153942501-chr15:52193069

False

Read

count

too

low:

FAIL

REEP3--PXN-AS1

1.0

0.0

INCL_NON_REF_SPLICE

REEP3^ENSG00000165476.14

chr10:63598203:+

PXN-AS1^ENSG00000255857.6

chr12:120213108:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2367:3128:9225

YES_LDAS

0.0034

1.8062

1.9329

"[""INTERCHROMOSOMAL[chr10--chr12]""]"

chr10:63598203-chr12:120213108

False

Read

count

too

low:

FAIL

RECQL4--IQCA1L

1.0

0.0

INCL_NON_REF_SPLICE

RECQL4^ENSG00000160957.14

chr8:144512392:-

IQCA1L^ENSG00000278685.4

chr7:151190954:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1136:28247:28800

NO_LDAS

0.0034

1.585

1.7465

"[""INTERCHROMOSOMAL[chr8--chr7]""]"

chr8:144512392-chr7:151190954

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RCC2--TOM1L2

1.0

0.0

INCL_NON_REF_SPLICE

RCC2^ENSG00000179051.14

chr1:17439545:-

TOM1L2^ENSG00000175662.18

chr17:17882841:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2236:37704:24078

NO_LDAS

0.0034

1.6895

1.8295

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:17439545-chr17:17882841

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RCC2--FAM8A4P

0.5

0.0

INCL_NON_REF_SPLICE

RCC2^ENSG00000179051.14

chr1:17412122:-

FAM8A4P^ENSG00000232730.1

chrY:12321674:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2441:11347:17717

NO_LDAS

0.0017

1.9656

1.5656

"[""INTERCHROMOSOMAL[chr1--chrY]""]"

chr1:17412122-chrY:12321674

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RCC1--JPT2

1.0

0.0

ONLY_REF_SPLICE

RCC1^ENSG00000180198.16

chr1:28506084:+

JPT2^ENSG00000206053.13

chr16:1685439:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1235:48666:7278

NO_LDAS

0.0034

1.4295

1.7465

"[""INTERCHROMOSOMAL[chr1--chr16]""]"

chr1:28506084-chr16:1685439

False

Read

count

too

low:

FAIL

RCBTB1--SULT1A1

0.25

0.0

INCL_NON_REF_SPLICE

RCBTB1^ENSG00000136144.12

chr13:49541773:-

SULT1A1^ENSG00000196502.12

chr16:28606236:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2415:6283:8300

NO_LDAS

0.0009

1.5329

1.5058

"[""INTERCHROMOSOMAL[chr13--chr16]""]"

chr13:49541773-chr16:28606236

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RCBTB1--AC020765.6

0.25

0.0

INCL_NON_REF_SPLICE

RCBTB1^ENSG00000136144.12

chr13:49541773:-

AC020765.6^ENSG00000288656.1

chr16:28592443:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2415:6283:8300

NO_LDAS

0.0009

1.5329

1.5301

"[""INTERCHROMOSOMAL[chr13--chr16]""]"

chr13:49541773-chr16:28592443

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RC3H1--RABGAP1L

1.0

0.0

ONLY_REF_SPLICE

RC3H1^ENSG00000135870.12

chr1:174022096:-

RABGAP1L^ENSG00000152061.23

chr1:174637375:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1469:5110:28604

YES_LDAS

0.0034

1.7056

1.8256

"[""INTRACHROMOSOMAL[chr1:0.14Mb]""]"

chr1:174022096-chr1:174637375

False

Read

count

too

low:

FAIL

RBM6--DAP3

1.0

0.0

ONLY_REF_SPLICE

RBM6^ENSG00000004534.15

chr3:49962685:+

DAP3^ENSG00000132676.16

chr1:155731356:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2336:37809:17422

YES_LDAS

0.0034

1.9656

1.9329

"[""INTERCHROMOSOMAL[chr3--chr1]""]"

chr3:49962685-chr1:155731356

False

Read

count

too

low:

FAIL

RBM6--CCDC32

1.0

0.0

INCL_NON_REF_SPLICE

RBM6^ENSG00000004534.15

chr3:50077034:+

CCDC32^ENSG00000128891.16

chr15:40538653:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2175:23450:4853

YES_LDAS

0.0034

1.8892

1.3996

"[""INTERCHROMOSOMAL[chr3--chr15]""]"

chr3:50077034-chr15:40538653

False

Read

count

too

low:

FAIL

RBM5--FHL2

1.0

0.0

INCL_NON_REF_SPLICE

RBM5^ENSG00000003756.17

chr3:50093875:+

FHL2^ENSG00000115641.19

chr2:105373571:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2402:28231:7950

NO_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr3--chr2]""]"

chr3:50093875-chr2:105373571

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RBM3--CMSS1

1.0

0.0

INCL_NON_REF_SPLICE

RBM3^ENSG00000102317.18

chrX:48576562:+

CMSS1^ENSG00000184220.12

chr3:100176255:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1374:13264:26138

NO_LDAS

0.0034

1.8892

1.231

"[""INTERCHROMOSOMAL[chrX--chr3]""]"

chrX:48576562-chr3:100176255

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RBM15B--RYR3

1.0

0.0

INCL_NON_REF_SPLICE

RBM15B^ENSG00000259956.2

chr3:51392366:+

RYR3^ENSG00000198838.14

chr15:33662181:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1475:13232:11341

NO_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr3--chr15]""]"

chr3:51392366-chr15:33662181

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RBL1--SEPTIN3

0.2

0.0

INCL_NON_REF_SPLICE

RBL1^ENSG00000080839.12

chr20:37095884:-

SEPTIN3^ENSG00000100167.20

chr22:41976902:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2253:49936:8497

NO_LDAS

0.0007

1.3996

0.8366

"[""INTERCHROMOSOMAL[chr20--chr22]""]"

chr20:37095884-chr22:41976902

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RASAL2--RNF38

1.0

0.0

ONLY_REF_SPLICE

RASAL2^ENSG00000075391.17

chr1:178094694:+

RNF38^ENSG00000137075.18

chr9:36424683:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1153:37332:12616

NO_LDAS

0.0034

1.6729

1.5628

"[""INTERCHROMOSOMAL[chr1--chr9]""]"

chr1:178094694-chr9:36424683

False

Read

count

too

low:

FAIL

RASA3--SLC9A3R2

1.0

0.0

ONLY_REF_SPLICE

RASA3^ENSG00000185989.11

chr13:114132435:-

SLC9A3R2^ENSG00000065054.14

chr16:2036324:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1143:2108:13569

YES_LDAS

0.0034

1.8892

"[""INTERCHROMOSOMAL[chr13--chr16]""]"

chr13:114132435-chr16:2036324

False

Read

count

too

low:

FAIL

RASA3--NCOA5

1.0

0.0

ONLY_REF_SPLICE

RASA3^ENSG00000185989.11

chr13:114132435:-

NCOA5^ENSG00000124160.12

chr20:46070536:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1369:29566:7207

YES_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr13--chr20]""]"

chr13:114132435-chr20:46070536

False

Read

count

too

low:

FAIL

RASA2--MCPH1

1.0

0.0

ONLY_REF_SPLICE

RASA2^ENSG00000155903.13

chr3:141487216:+

MCPH1^ENSG00000147316.13

chr8:6621454:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1252:38627:29067

YES_LDAS

0.0034

1.9219

1.8892

"[""INTERCHROMOSOMAL[chr3--chr8]""]"

chr3:141487216-chr8:6621454

False

Read

count

too

low:

FAIL

RAPGEF5--C11orf68

0.1

0.0

INCL_NON_REF_SPLICE

RAPGEF5^ENSG00000136237.19

chr7:22356986:-

C11orf68^ENSG00000175573.7

chr11:65919031:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2236:19672:5988

NO_LDAS

0.0003

1.231

1.4716

"[""INTERCHROMOSOMAL[chr7--chr11]""]"

chr7:22356986-chr11:65919031

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RANBP9--JARID2

1.0

0.0

ONLY_REF_SPLICE

RANBP9^ENSG00000010017.13

chr6:13696785:-

JARID2^ENSG00000008083.14

chr6:15374117:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1433:43052:9604

NO_LDAS

0.0034

1.4295

1.7465

"[""INTRACHROMOSOMAL[chr6:1.53Mb]""]"

chr6:13696785-chr6:15374117

False

Read

count

too

low:

FAIL

RANBP3--SCAND1

1.0

0.0

INCL_NON_REF_SPLICE

RANBP3^ENSG00000031823.14

chr19:5932749:-

SCAND1^ENSG00000171222.11

chr20:35954246:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1273:23935:24078

NO_LDAS

0.0034

1.8892

1.4295

"[""INTERCHROMOSOMAL[chr19--chr20]""]"

chr19:5932749-chr20:35954246

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RALGPS2--CAPN8

1.0

0.0

ONLY_REF_SPLICE

RALGPS2^ENSG00000116191.17

chr1:178725419:+

CAPN8^ENSG00000203697.12

chr1:223654399:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1216:7432:12812

NO_LDAS

0.0034

1.7056

1.9329

"[""INTRACHROMOSOMAL[chr1:44.62Mb]""]"

chr1:178725419-chr1:223654399

False

Read

count

too

low:

FAIL

RALA--BBS9

1.0

0.0

ONLY_REF_SPLICE

RALA^ENSG00000006451.8

chr7:39623825:+

BBS9^ENSG00000122507.21

chr7:33505463:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1328:20651:20771

YES_LDAS

0.0034

1.7465

1.9656

"[""INTRACHROMOSOMAL[chr7:5.75Mb]""]"

chr7:39623825-chr7:33505463

False

Read

count

too

low:

FAIL

RABGAP1L--ACKR1

1.0

0.0

INCL_NON_REF_SPLICE

RABGAP1L^ENSG00000152061.23

chr1:174990000:+

ACKR1^ENSG00000213088.12

chr1:159204544:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2165:12997:14802

NO_LDAS

0.0034

1.7465

1.4256

"[""INTRACHROMOSOMAL[chr1:14.95Mb]""]"

chr1:174990000-chr1:159204544

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RABAC1--ERFL

1.0

0.0

ONLY_REF_SPLICE

RABAC1^ENSG00000105404.11

chr19:41957018:-

ERFL^ENSG00000268041.2

chr19:41912932:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1379:2521:9435

YES_LDAS

0.0034

1.5219

1.6895

"[""INTRACHROMOSOMAL[chr19:0.03Mb]"",""NEIGHBORS[28165]""]"

chr19:41957018-chr19:41912932

True

pair|recurrent

breakpoints

Blacklisted

FAIL

RAB3IP--HMGA2

1.0

0.0

ONLY_REF_SPLICE

RAB3IP^ENSG00000127328.22

chr12:69739031:+

HMGA2^ENSG00000149948.14

chr12:65838519:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1466:40050:10935

YES_LDAS

0.0034

1.7819

1.7465

"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr12:3.77Mb]""]"

chr12:69739031-chr12:65838519

False

Read

count

too

low:

FAIL

RAB15--TSPOAP1

1.0

0.0

INCL_NON_REF_SPLICE

RAB15^ENSG00000139998.16

chr14:64972834:-

TSPOAP1^ENSG00000005379.17

chr17:58327663:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1410:20141:24148

NO_LDAS

0.0034

1.2419

1.7819

"[""INTERCHROMOSOMAL[chr14--chr17]""]"

chr14:64972834-chr17:58327663

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

RAB15--NAGLU

1.0

0.0

INCL_NON_REF_SPLICE

RAB15^ENSG00000139998.16

chr14:64952511:-

NAGLU^ENSG00000108784.10

chr17:42543165:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1196:12269:2695

YES_LDAS

0.0034

1.9656

1.9899

"[""INTERCHROMOSOMAL[chr14--chr17]""]"

chr14:64952511-chr17:42543165

False

Read

count

too

low:

FAIL

RAB14--LINC00299

1.0

0.0

INCL_NON_REF_SPLICE

RAB14^ENSG00000119396.11

chr9:121182930:-

LINC00299^ENSG00000236790.6

chr2:8242586:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2144:49038:24457

NO_LDAS

0.0034

1.7465

1.8323

"[""INTERCHROMOSOMAL[chr9--chr2]""]"

chr9:121182930-chr2:8242586

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PXDN--H2AZ2

1.0

0.0

INCL_NON_REF_SPLICE

PXDN^ENSG00000130508.11

chr2:1680189:-

H2AZ2^ENSG00000105968.19

chr7:44835030:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2291:49402:25984

NO_LDAS

0.0034

1.8892

1.6402

"[""INTERCHROMOSOMAL[chr2--chr7]""]"

chr2:1680189-chr7:44835030

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PVT1--CDKN1A

1.0

0.0

INCL_NON_REF_SPLICE

PVT1^ENSG00000249859.12

chr8:128071542:+

CDKN1A^ENSG00000124762.14

chr6:36680498:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2358:5247:22845

NO_LDAS

0.0034

1.0389

1.7465

"[""INTERCHROMOSOMAL[chr8--chr6]""]"

chr8:128071542-chr6:36680498

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PUM2--STRN

1.0

0.0

ONLY_REF_SPLICE

PUM2^ENSG00000055917.16

chr2:20350597:-

STRN^ENSG00000115808.12

chr2:36925208:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2220:12553:6549

YES_LDAS

0.0034

1.6895

1.8892

"[""INTRACHROMOSOMAL[chr2:16.49Mb]""]"

chr2:20350597-chr2:36925208

False

Read

count

too

low:

FAIL

PTRH1--PPP2R5E

1.0

0.0

INCL_NON_REF_SPLICE

PTRH1^ENSG00000187024.15

chr9:127715138:-

PPP2R5E^ENSG00000154001.14

chr14:63542990:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1363:4883:22579

YES_LDAS

0.0034

1.7232

1.5058

"[""INTERCHROMOSOMAL[chr9--chr14]""]"

chr9:127715138-chr14:63542990

False

Read

count

too

low:

FAIL

PTPRM--TWNK

1.0

0.0

INCL_NON_REF_SPLICE

PTPRM^ENSG00000173482.17

chr18:8143779:+

TWNK^ENSG00000107815.10

chr10:100987402:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1416:14810:24863

NO_LDAS

0.0034

1.3996

1.8062

"[""INTERCHROMOSOMAL[chr18--chr10]""]"

chr18:8143779-chr10:100987402

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PTPRM--EPB41L3

1.0

0.0

ONLY_REF_SPLICE

PTPRM^ENSG00000173482.17

chr18:7955414:+

EPB41L3^ENSG00000082397.18

chr18:5489194:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1273:2934:5946

NO_LDAS

0.0034

1.9086

1.6402

"[""INTRACHROMOSOMAL[chr18:1.94Mb]""]"

chr18:7955414-chr18:5489194

False

Read

count

too

low:

FAIL

PTPRD--KDM4C

1.0

0.0

ONLY_REF_SPLICE

PTPRD^ENSG00000153707.17

chr9:8857638:-

KDM4C^ENSG00000107077.19

chr9:6980925:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1253:41312:15082

NO_LDAS

0.0034

1.8256

1.9656

"[""INTRACHROMOSOMAL[chr9:1.14Mb]""]"

chr9:8857638-chr9:6980925

False

Read

count

too

low:

FAIL

PTPN9--SNF8

1.0

0.0

INCL_NON_REF_SPLICE

PTPN9^ENSG00000169410.10

chr15:75523121:-

SNF8^ENSG00000159210.10

chr17:48936009:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2162:7068:11005

YES_LDAS

0.0034

1.8892

1.9899

"[""INTERCHROMOSOMAL[chr15--chr17]""]"

chr15:75523121-chr17:48936009

False

Read

count

too

low:

FAIL

PTPN3--PTPN11

1.0

0.0

ONLY_REF_SPLICE

PTPN3^ENSG00000070159.14

chr9:109382302:-

PTPN11^ENSG00000179295.18

chr12:112488443:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2431:45875:18585

NO_LDAS

0.0034

1.9656

1.8892

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr9--chr12]""]"

chr9:109382302-chr12:112488443

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

PTPN12--TUBA4A

1.0

0.0

INCL_NON_REF_SPLICE

PTPN12^ENSG00000127947.16

chr7:77537362:+

TUBA4A^ENSG00000127824.14

chr2:219250930:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1228:14980:8959

YES_LDAS

0.0034

1.5329

1.8295

"[""INTERCHROMOSOMAL[chr7--chr2]""]"

chr7:77537362-chr2:219250930

False

Read

count

too

low:

FAIL

PTMAP6--PTMAP2

1.0

0.0

INCL_NON_REF_SPLICE

PTMAP6^ENSG00000237000.1

chr20:56701366:-

PTMAP2^ENSG00000197744.5

chr5:118973859:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2205:47420:1532

NO_LDAS

0.0034

1.8892

1.5058

"[""INTERCHROMOSOMAL[chr20--chr5]""]"

chr20:56701366-chr5:118973859

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PTGR1--ZHX1

1.0

0.0

INCL_NON_REF_SPLICE

PTGR1^ENSG00000106853.20

chr9:111599359:-

ZHX1^ENSG00000165156.15

chr8:123274487:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2139:11638:19258

NO_LDAS

0.0034

1.7819

1.3996

"[""INTERCHROMOSOMAL[chr9--chr8]""]"

chr9:111599359-chr8:123274487

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PSME4--S1PR2

1.0

0.0

INCL_NON_REF_SPLICE

PSME4^ENSG00000068878.15

chr2:53896800:-

S1PR2^ENSG00000267534.4

chr19:10223749:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2331:29315:16245

NO_LDAS

0.0034

1.9329

1.4256

"[""INTERCHROMOSOMAL[chr2--chr19]""]"

chr2:53896800-chr19:10223749

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PSME2--AL512782.1

1.0

0.0

INCL_NON_REF_SPLICE

PSME2^ENSG00000100911.16

chr14:24145058:-

AL512782.1^ENSG00000270400.1

chr13:83145656:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1258:3872:11523

NO_LDAS

0.0034

1.9329

"[""INTERCHROMOSOMAL[chr14--chr13]""]"

chr14:24145058-chr13:83145656

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PSMB8-AS1--GSTO1

1.0

0.0

INCL_NON_REF_SPLICE

PSMB8-AS1^ENSG00000204261.9

chr6:32844383:+

GSTO1^ENSG00000148834.13

chr10:104255163:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2131:48618:26278

NO_LDAS

0.0034

1.6729

1.4295

"[""INTERCHROMOSOMAL[chr6--chr10]""]"

chr6:32844383-chr10:104255163

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PSMA7--PRPF3

1.0

0.0

ONLY_REF_SPLICE

PSMA7^ENSG00000101182.15

chr20:62143208:-

PRPF3^ENSG00000117360.13

chr1:150349157:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1356:33044:29515

YES_LDAS

0.0034

1.7819

1.8062

"[""INTERCHROMOSOMAL[chr20--chr1]""]"

chr20:62143208-chr1:150349157

False

Read

count

too

low:

FAIL

PSEN2--POFUT2

1.0

0.0

INCL_NON_REF_SPLICE

PSEN2^ENSG00000143801.18

chr1:226881967:+

POFUT2^ENSG00000186866.17

chr21:45267572:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1207:4082:6563

NO_LDAS

0.0034

1.9086

1.7968

"[""INTERCHROMOSOMAL[chr1--chr21]""]"

chr1:226881967-chr21:45267572

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PSAPL1--TRIM15

0.25

0.0

INCL_NON_REF_SPLICE

PSAPL1^ENSG00000178597.7

chr4:7431712:-

TRIM15^ENSG00000204610.14

chr6:30163949:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1376:38343:12518

NO_LDAS

0.0009

1.6895

1.8062

"[""INTERCHROMOSOMAL[chr4--chr6]""]"

chr4:7431712-chr6:30163949

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PSAPL1--SELENOP

1.0

0.0

INCL_NON_REF_SPLICE

PSAPL1^ENSG00000178597.7

chr4:7434593:-

SELENOP^ENSG00000250722.6

chr5:42801190:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1159:24793:17885

NO_LDAS

0.0034

1.9086

1.7465

"[""INTERCHROMOSOMAL[chr4--chr5]""]"

chr4:7434593-chr5:42801190

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PRRG3--SYDE2

1.0

0.0

INCL_NON_REF_SPLICE

PRRG3^ENSG00000130032.17

chrX:151703913:+

SYDE2^ENSG00000097096.9

chr1:85158853:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2306:29865:13219

NO_LDAS

0.0034

0.0

1.7232

"[""INTERCHROMOSOMAL[chrX--chr1]""]"

chrX:151703913-chr1:85158853

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PRPF6--ACOT7

1.0

0.0

ONLY_REF_SPLICE

PRPF6^ENSG00000101161.8

chr20:64022878:+

ACOT7^ENSG00000097021.20

chr1:6264695:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1159:3783:18039

YES_LDAS

0.0034

1.9329

1.5656

"[""INTERCHROMOSOMAL[chr20--chr1]""]"

chr20:64022878-chr1:6264695

False

Read

count

too

low:

FAIL

PROSER1--ZNFX1

1.0

0.0

INCL_NON_REF_SPLICE

PROSER1^ENSG00000120685.20

chr13:39012801:-

ZNFX1^ENSG00000124201.15

chr20:49248577:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2126:35172:28380

YES_LDAS

0.0034

1.9656

1.7232

"[""INTERCHROMOSOMAL[chr13--chr20]""]"

chr13:39012801-chr20:49248577

False

Read

count

too

low:

FAIL

PROM2--TRAF3IP3

1.0

0.0

INCL_NON_REF_SPLICE

PROM2^ENSG00000155066.16

chr2:95281043:+

TRAF3IP3^ENSG00000009790.15

chr1:209780426:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1313:33684:14424

NO_LDAS

0.0034

1.3383

1.8892

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:95281043-chr1:209780426

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PROM1--TBC1D25

1.0

0.0

INCL_NON_REF_SPLICE

PROM1^ENSG00000007062.12

chr4:16083446:-

TBC1D25^ENSG00000068354.16

chrX:48539898:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1449:49799:24737

NO_LDAS

0.0034

1.7465

1.6729

"[""INTERCHROMOSOMAL[chr4--chrX]""]"

chr4:16083446-chrX:48539898

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PRMT5--LRP6

1.0

0.0

INCL_NON_REF_SPLICE

PRMT5^ENSG00000100462.16

chr14:22926133:-

LRP6^ENSG00000070018.9

chr12:12125357:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2204:48432:15531

NO_LDAS

0.0034

1.8892

1.9899

"[""INTERCHROMOSOMAL[chr14--chr12]""]"

chr14:22926133-chr12:12125357

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PRMT1--FAM13A-AS1

1.0

0.0

INCL_NON_REF_SPLICE

PRMT1^ENSG00000126457.22

chr19:49686726:+

FAM13A-AS1^ENSG00000248019.3

chr4:88710697:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1266:4932:19356

NO_LDAS

0.0034

1.3996

1.8892

"[""INTERCHROMOSOMAL[chr19--chr4]""]"

chr19:49686726-chr4:88710697

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PRLR--CAST

1.0

0.0

ONLY_REF_SPLICE

PRLR^ENSG00000113494.17

chr5:35195103:-

CAST^ENSG00000153113.24

chr5:96722639:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1421:9438:25031

YES_LDAS

0.0034

1.8892

1.7819

"[""INTRACHROMOSOMAL[chr5:61.29Mb]""]"

chr5:35195103-chr5:96722639

False

Read

count

too

low:

FAIL

PRICKLE4--AC009486.2

0.5

0.0

INCL_NON_REF_SPLICE

PRICKLE4^ENSG00000278224.7

chr6:41785076:+

AC009486.2^ENSG00000286427.1

chr2:12703737:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2196:6121:27749

NO_LDAS

0.0017

1.9329

1.9656

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:41785076-chr2:12703737

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PRICKLE2--NR1D2

1.0

0.0

ONLY_REF_SPLICE

PRICKLE2^ENSG00000163637.13

chr3:64267899:-

NR1D2^ENSG00000174738.13

chr3:23959671:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1287:12617:10725

NO_LDAS

0.0034

1.8062

1.8323

"[""INTRACHROMOSOMAL[chr3:40.11Mb]""]"

chr3:64267899-chr3:23959671

False

Read

count

too

low:

FAIL

PREPL--AC025580.2

1.0

0.0

ONLY_REF_SPLICE

PREPL^ENSG00000138078.16

chr2:44347210:-

AC025580.2^ENSG00000259354.5

chr15:45476079:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1361:21079:14872

NO_LDAS

0.0034

1.9656

1.9086

"[""INTERCHROMOSOMAL[chr2--chr15]""]"

chr2:44347210-chr15:45476079

False

Read

count

too

low:

FAIL

PRDX6-AS1--TNFSF4

1.0

0.0

INCL_NON_REF_SPLICE

PRDX6-AS1^ENSG00000203739.4

chr1:173440463:-

TNFSF4^ENSG00000117586.11

chr1:173207185:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2107:27543:6283

NO_LDAS

0.0034

1.8062

1.5656

"[""INTRACHROMOSOMAL[chr1:0.21Mb]""]"

chr1:173440463-chr1:173207185

True

pair|recurrent

breakpoints

Blacklisted

FAIL

PRDM15--RASEF

1.0

0.0

INCL_NON_REF_SPLICE

PRDM15^ENSG00000141956.14

chr21:41801188:-

RASEF^ENSG00000165105.10

chr9:82982746:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1254:29088:17647

NO_LDAS

0.0034

1.4295

1.585

"[""INTERCHROMOSOMAL[chr21--chr9]""]"

chr21:41801188-chr9:82982746

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PRDM12--MATN4

1.0

0.0

INCL_NON_REF_SPLICE

PRDM12^ENSG00000130711.5

chr9:130681641:+

MATN4^ENSG00000124159.16

chr20:45298187:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1480:38651:26334

NO_LDAS

0.0034

0.9183

1.5058

"[""INTERCHROMOSOMAL[chr9--chr20]""]"

chr9:130681641-chr20:45298187

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PRDM11--CORO1C

1.0

0.0

INCL_NON_REF_SPLICE

PRDM11^ENSG00000019485.13

chr11:45219757:+

CORO1C^ENSG00000110880.11

chr12:108646155:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1231:14025:13919

YES_LDAS

0.0034

1.8256

1.8062

"[""INTERCHROMOSOMAL[chr11--chr12]""]"

chr11:45219757-chr12:108646155

False

Read

count

too

low:

FAIL

PPP4R2--SMCHD1

1.0

0.0

INCL_NON_REF_SPLICE

PPP4R2^ENSG00000163605.15

chr3:72997071:+

SMCHD1^ENSG00000101596.16

chr18:2688686:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1187:51012:3887

NO_LDAS

0.0034

1.6895

1.5656

"[""INTERCHROMOSOMAL[chr3--chr18]""]"

chr3:72997071-chr18:2688686

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PPP3R1--MGAT4A

1.0

0.0

ONLY_REF_SPLICE

PPP3R1^ENSG00000221823.11

chr2:68217092:-

MGAT4A^ENSG00000071073.13

chr2:98726567:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1402:16703:7039

YES_LDAS

0.0034

1.9329

1.4295

"[""INTRACHROMOSOMAL[chr2:30.36Mb]""]"

chr2:68217092-chr2:98726567

False

Read

count

too

low:

FAIL

PPP3CB--ESRRG

1.0

0.0

INCL_NON_REF_SPLICE

PPP3CB^ENSG00000107758.16

chr10:73479317:-

ESRRG^ENSG00000196482.18

chr1:216677159:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1494:12819:10178

NO_LDAS

0.0034

1.8323

"[""INTERCHROMOSOMAL[chr10--chr1]""]"

chr10:73479317-chr1:216677159

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PPP3CA--TET2

1.0

0.0

ONLY_REF_SPLICE

PPP3CA^ENSG00000138814.17

chr4:101346739:-

TET2^ENSG00000168769.14

chr4:105259619:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1374:32405:4643

YES_LDAS

0.0034

1.6895

1.9656

"[""INTRACHROMOSOMAL[chr4:3.80Mb]""]"

chr4:101346739-chr4:105259619

False

Read

count

too

low:

FAIL

PPP2R5B--AL139246.1

1.0

0.0

INCL_NON_REF_SPLICE

PPP2R5B^ENSG00000068971.14

chr11:64933726:+

AL139246.1^ENSG00000224387.1

chr1:2493116:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1433:23037:23392

NO_LDAS

0.0034

1.8062

1.585

"[""INTERCHROMOSOMAL[chr11--chr1]""]"

chr11:64933726-chr1:2493116

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PPP1R13B--RELL1

1.0

0.0

INCL_NON_REF_SPLICE

PPP1R13B^ENSG00000088808.18

chr14:103847295:-

RELL1^ENSG00000181826.10

chr4:37649500:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1427:26783:7824

YES_LDAS

0.0034

1.8295

1.8256

"[""INTERCHROMOSOMAL[chr14--chr4]""]"

chr14:103847295-chr4:37649500

False

Read

count

too

low:

FAIL

PPIP5K1--AC008629.3

0.5

0.0

INCL_NON_REF_SPLICE

PPIP5K1^ENSG00000168781.22

chr15:43564103:-

AC008629.3^ENSG00000250928.1

chr5:119011855:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1245:23458:19356

NO_LDAS

0.0017

1.9086

1.9656

"[""INTERCHROMOSOMAL[chr15--chr5]""]"

chr15:43564103-chr5:119011855

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PPIL6--FCMR

1.0

0.0

INCL_NON_REF_SPLICE

PPIL6^ENSG00000185250.16

chr6:109440516:-

FCMR^ENSG00000162894.12

chr1:206909520:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1275:49839:7207

NO_LDAS

0.0034

1.6895

1.5058

"[""INTERCHROMOSOMAL[chr6--chr1]""]"

chr6:109440516-chr1:206909520

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PPIB--PPIC

1.0

0.0

ONLY_REF_SPLICE

PPIB^ENSG00000166794.6

chr15:64162041:-

PPIC^ENSG00000168938.6

chr5:123028868:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1364:2764:12014

NO_LDAS

0.0034

1.9086

1.5301

"[""INTERCHROMOSOMAL[chr15--chr5]""]"

chr15:64162041-chr5:123028868

False

Read

count

too

low:

FAIL

PPIB--BAHD1

1.0

0.0

INCL_NON_REF_SPLICE

PPIB^ENSG00000166794.6

chr15:64158675:-

BAHD1^ENSG00000140320.12

chr15:40458724:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1310:45900:21738

NO_LDAS

0.0034

1.9656

1.8892

"[""INTRACHROMOSOMAL[chr15:23.69Mb]""]"

chr15:64158675-chr15:40458724

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PPFIBP2--AC011458.1

1.0

0.0

INCL_NON_REF_SPLICE

PPFIBP2^ENSG00000166387.13

chr11:7620978:+

AC011458.1^ENSG00000270402.1

chr19:19709046:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1228:7893:7418

NO_LDAS

0.0034

1.6402

1.053

"[""INTERCHROMOSOMAL[chr11--chr19]""]"

chr11:7620978-chr19:19709046

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PPFIA1--UPK3BL1

1.0

0.0

INCL_NON_REF_SPLICE

PPFIA1^ENSG00000131626.19

chr11:70327749:+

UPK3BL1^ENSG00000267368.1

chr7:102637382:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1109:4778:15475

YES_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr11--chr7]""]"

chr11:70327749-chr7:102637382

False

Read

count

too

low:

FAIL

POU5F1--TYW1

1.0

0.0

ONLY_REF_SPLICE

POU5F1^ENSG00000204531.20

chr6:31166534:-

TYW1^ENSG00000198874.13

chr7:67067285:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1160:19219:9912

YES_LDAS

0.0034

1.9329

1.9086

"[""INTERCHROMOSOMAL[chr6--chr7]""]"

chr6:31166534-chr7:67067285

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

POLR3E--RNU5A-1

0.5

0.0

INCL_NON_REF_SPLICE

POLR3E^ENSG00000058600.16

chr16:22303004:+

RNU5A-1^ENSG00000199568.1

chr15:65296071:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1426:13232:16077

YES_LDAS

0.0017

1.9656

1.7819

"[""INTERCHROMOSOMAL[chr16--chr15]""]"

chr16:22303004-chr15:65296071

False

Read

count

too

low:

FAIL

POLR2J2--AC004951.2

0.5

0.0

INCL_NON_REF_SPLICE

POLR2J2^ENSG00000228049.7

chr7:102666129:-

AC004951.2^ENSG00000239556.4

chr7:43987888:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1401:22398:10150

YES_LDAS

0.0017

1.7819

1.7968

"[""INTRACHROMOSOMAL[chr7:58.68Mb]""]"

chr7:102666129-chr7:43987888

False

Read

count

too

low:

FAIL

POLDIP2--AQP9

1.0

0.0

INCL_NON_REF_SPLICE

POLDIP2^ENSG00000004142.12

chr17:28351660:-

AQP9^ENSG00000103569.10

chr15:58185726:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2472:42469:12266

NO_LDAS

0.0034

1.7465

1.7056

"[""INTERCHROMOSOMAL[chr17--chr15]""]"

chr17:28351660-chr15:58185726

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

POLA1--PRDX4

1.0

0.0

ONLY_REF_SPLICE

POLA1^ENSG00000101868.13

chrX:24699549:+

PRDX4^ENSG00000123131.13

chrX:23679165:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1138:28635:18347

YES_LDAS

0.0034

1.3383

1.9329

"[""INTRACHROMOSOMAL[chrX:1.01Mb]""]"

chrX:24699549-chrX:23679165

False

Read

count

too

low:

FAIL

PMS2P11--AC091390.3

1.0

0.0

INCL_NON_REF_SPLICE

PMS2P11^ENSG00000241350.1

chr7:77011970:+

AC091390.3^ENSG00000239969.5

chr7:102376253:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1122:10918:18824

YES_LDAS

0.0034

1.9656

1.3996

"[""INTRACHROMOSOMAL[chr7:25.35Mb]""]"

chr7:77011970-chr7:102376253

False

Read

count

too

low:

FAIL

PMFBP1--PPFIBP1

1.0

0.0

INCL_NON_REF_SPLICE

PMFBP1^ENSG00000118557.16

chr16:72164896:-

PPFIBP1^ENSG00000110841.14

chr12:27654722:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1264:1146:17450

NO_LDAS

0.0034

1.2729

1.8295

"[""INTERCHROMOSOMAL[chr16--chr12]""]"

chr16:72164896-chr12:27654722

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLXNB3--TVP23A

0.5

0.0

INCL_NON_REF_SPLICE

PLXNB3^ENSG00000198753.12

chrX:153769204:+

TVP23A^ENSG00000166676.17

chr16:10763626:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2269:15894:7684

NO_LDAS

0.0017

1.7968

1.7232

"[""INTERCHROMOSOMAL[chrX--chr16]""]"

chrX:153769204-chr16:10763626

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLXDC2--GOLGA8CP

0.17

0.0

INCL_NON_REF_SPLICE

PLXDC2^ENSG00000120594.17

chr10:20286656:+

GOLGA8CP^ENSG00000181984.11

chr15:20574016:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1327:12690:11243

NO_LDAS

0.0006

1.8295

1.8256

"[""INTERCHROMOSOMAL[chr10--chr15]""]"

chr10:20286656-chr15:20574016

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLXDC2--AL161935.3

0.17

0.0

INCL_NON_REF_SPLICE

PLXDC2^ENSG00000120594.17

chr10:20286656:+

AL161935.3^ENSG00000286694.1

chr10:31608790:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1327:12690:11243

NO_LDAS

0.0006

1.8295

1.7056

"[""INTRACHROMOSOMAL[chr10:11.32Mb]""]"

chr10:20286656-chr10:31608790

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLSCR1--MYLK-AS1

1.0

0.0

ONLY_REF_SPLICE

PLSCR1^ENSG00000188313.13

chr3:146544467:-

MYLK-AS1^ENSG00000239523.6

chr3:123629494:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1317:43796:9267

YES_LDAS

0.0034

1.5656

1.9086

"[""INTRACHROMOSOMAL[chr3:22.87Mb]""]"

chr3:146544467-chr3:123629494

False

Read

count

too

low:

FAIL

PLSCR1--FOXP1

1.0

0.0

INCL_NON_REF_SPLICE

PLSCR1^ENSG00000188313.13

chr3:146517033:-

FOXP1^ENSG00000114861.23

chr3:70987737:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1302:2416:26040

NO_LDAS

0.0034

1.7465

1.9899

"[""INTRACHROMOSOMAL[chr3:74.93Mb]""]"

chr3:146517033-chr3:70987737

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLPPR3--CPT1A

1.0

0.0

INCL_NON_REF_SPLICE

PLPPR3^ENSG00000129951.19

chr19:821607:-

CPT1A^ENSG00000110090.13

chr11:68793354:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2284:17649:4559

NO_LDAS

0.0034

1.3753

1.8892

"[""INTERCHROMOSOMAL[chr19--chr11]""]"

chr19:821607-chr11:68793354

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLPP4--AC023282.1

1.0

0.0

ONLY_REF_SPLICE

PLPP4^ENSG00000203805.11

chr10:120575301:+

AC023282.1^ENSG00000274461.2

chr10:120812031:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1211:37203:11411

YES_LDAS

0.0034

1.9329

1.9086

"[""INTRACHROMOSOMAL[chr10:0.02Mb]"",""NEIGHBORS[16515]""]"

chr10:120575301-chr10:120812031

True

pair|recurrent

breakpoints

Blacklisted

FAIL

PLK3--DCST1

1.0

0.0

INCL_NON_REF_SPLICE

PLK3^ENSG00000173846.13

chr1:44804024:+

DCST1^ENSG00000163357.11

chr1:155035104:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1155:8629:21892

NO_LDAS

0.0034

1.8323

1.8892

"[""INTRACHROMOSOMAL[chr1:110.23Mb]""]"

chr1:44804024-chr1:155035104

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLK2--ATL3

1.0

0.0

INCL_NON_REF_SPLICE

PLK2^ENSG00000145632.15

chr5:58455285:-

ATL3^ENSG00000184743.13

chr11:63628917:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1231:19364:5428

NO_LDAS

0.0034

1.9656

1.5219

"[""INTERCHROMOSOMAL[chr5--chr11]""]"

chr5:58455285-chr11:63628917

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLIN1--MTRNR2L4

0.09

0.0

INCL_NON_REF_SPLICE

PLIN1^ENSG00000166819.12

chr15:89667602:-

MTRNR2L4^ENSG00000232196.4

chr16:3371942:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1497:39597:1378

NO_LDAS

0.0003

1.8892

1.9086

"[""INTERCHROMOSOMAL[chr15--chr16]""]"

chr15:89667602-chr16:3371942

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLEKHS1--CHMP7

1.0

0.0

ONLY_REF_SPLICE

PLEKHS1^ENSG00000148735.15

chr10:113755305:+

CHMP7^ENSG00000147457.14

chr8:23255247:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1156:40576:5960

YES_LDAS

0.0034

1.9329

1.5628

"[""INTERCHROMOSOMAL[chr10--chr8]""]"

chr10:113755305-chr8:23255247

False

Read

count

too

low:

FAIL

PLEKHJ1--CCDC74A

0.5

0.0

INCL_NON_REF_SPLICE

PLEKHJ1^ENSG00000104886.12

chr19:2234010:-

CCDC74A^ENSG00000163040.15

chr2:131529986:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1221:2594:18585

NO_LDAS

0.0017

1.7465

1.8256

"[""INTERCHROMOSOMAL[chr19--chr2]""]"

chr19:2234010-chr2:131529986

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PLEKHG4--HIPK1

1.0

0.0

INCL_NON_REF_SPLICE

PLEKHG4^ENSG00000196155.13

chr16:67285215:+

HIPK1^ENSG00000163349.22

chr1:113976741:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1178:29008:9015

YES_LDAS

0.0034

1.8256

1.6895

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:67285215-chr1:113976741

False

Read

count

too

low:

FAIL

PLEKHA8--GRK3

1.0

0.0

ONLY_REF_SPLICE

PLEKHA8^ENSG00000106086.20

chr7:30074132:+

GRK3^ENSG00000100077.15

chr22:25604377:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1337:12997:2359

YES_LDAS

0.0034

1.6895

1.9086

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr7--chr22]""]"

chr7:30074132-chr22:25604377

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

PLEKHA8--DCTPP1

1.0

0.0

INCL_NON_REF_SPLICE

PLEKHA8^ENSG00000106086.20

chr7:30028720:+

DCTPP1^ENSG00000179958.10

chr16:30424485:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2227:12949:27385

YES_LDAS

0.0034

1.6729

1.7819

"[""INTERCHROMOSOMAL[chr7--chr16]""]"

chr7:30028720-chr16:30424485

False

Read

count

too

low:

FAIL

PLA2G6--KNL1

1.0

0.0

INCL_NON_REF_SPLICE

PLA2G6^ENSG00000184381.20

chr22:38113520:-

KNL1^ENSG00000137812.20

chr15:40662882:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2408:27147:27091

YES_LDAS

0.0034

1.7819

1.5301

"[""INTERCHROMOSOMAL[chr22--chr15]""]"

chr22:38113520-chr15:40662882

False

Read

count

too

low:

FAIL

PLA2G6--DUOX2

1.0

0.0

INCL_NON_REF_SPLICE

PLA2G6^ENSG00000184381.20

chr22:38113529:-

DUOX2^ENSG00000140279.13

chr15:45111576:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2341:24785:14256

YES_LDAS

0.0034

1.9329

1.6729

"[""INTERCHROMOSOMAL[chr22--chr15]""]"

chr22:38113529-chr15:45111576

False

Read

count

too

low:

FAIL

PLA2G4B--SEPTIN7P14

1.0

0.0

INCL_NON_REF_SPLICE

PLA2G4B^ENSG00000243708.11

chr15:41842591:+

SEPTIN7P14^ENSG00000245958.6

chr4:119499587:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2201:4616:8917

YES_LDAS

0.0034

1.231

1.7232

"[""INTERCHROMOSOMAL[chr15--chr4]""]"

chr15:41842591-chr4:119499587

False

Read

count

too

low:

FAIL

PLA2G4B--RAB27A

1.0

0.0

INCL_NON_REF_SPLICE

PLA2G4B^ENSG00000243708.11

chr15:41842591:+

RAB27A^ENSG00000069974.16

chr15:55314136:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2260:28029:10234

YES_LDAS

0.0034

1.231

1.8295

"[""INTRACHROMOSOMAL[chr15:13.35Mb]""]"

chr15:41842591-chr15:55314136

False

Read

count

too

low:

FAIL

PITPNC1--ARHGAP26

1.0

0.0

ONLY_REF_SPLICE

PITPNC1^ENSG00000154217.15

chr17:67378202:+

ARHGAP26^ENSG00000145819.18

chr5:143054439:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2170:41134:3508

YES_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr17--chr5]""]"

chr17:67378202-chr5:143054439

False

Read

count

too

low:

FAIL

PIP4K2A--SGMS1

1.0

0.0

ONLY_REF_SPLICE

PIP4K2A^ENSG00000150867.14

chr10:22567851:-

SGMS1^ENSG00000198964.14

chr10:50590247:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1272:45746:1771

YES_LDAS

0.0034

1.4716

1.9329

"[""INTRACHROMOSOMAL[chr10:27.59Mb]""]"

chr10:22567851-chr10:50590247

False

Read

count

too

low:

FAIL

PIM2--PMS2

1.0

0.0

INCL_NON_REF_SPLICE

PIM2^ENSG00000102096.9

chrX:48914395:-

PMS2^ENSG00000122512.16

chr7:5972134:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2330:33247:25578

NO_LDAS

0.0034

1.7232

1.9899

"[""INTERCHROMOSOMAL[chrX--chr7]""]"

chrX:48914395-chr7:5972134

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PILRA--STAG3L5P

1.0

0.0

ONLY_REF_SPLICE

PILRA^ENSG00000085514.16

chr7:100374433:+

STAG3L5P^ENSG00000242294.6

chr7:100349717:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1168:8677:14017

YES_LDAS

0.0034

1.8295

1.7232

"[""INTRACHROMOSOMAL[chr7:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[21558]""]"

chr7:100374433-chr7:100349717

False

Read

count

too

low:

FAIL

PIK3R5--MAPK8IP1

0.33

0.0

INCL_NON_REF_SPLICE

PIK3R5^ENSG00000141506.14

chr17:8888334:-

MAPK8IP1^ENSG00000121653.11

chr11:45906017:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1221:22584:13471

NO_LDAS

0.0011

1.6402

1.5546

"[""INTERCHROMOSOMAL[chr17--chr11]""]"

chr17:8888334-chr11:45906017

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PIK3R4--CMPK1

1.0

0.0

INCL_NON_REF_SPLICE

PIK3R4^ENSG00000196455.8

chr3:130679327:-

CMPK1^ENSG00000162368.13

chr1:47368469:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2186:47251:29263

YES_LDAS

0.0034

1.5301

1.8295

"[""INTERCHROMOSOMAL[chr3--chr1]""]"

chr3:130679327-chr1:47368469

False

Read

count

too

low:

FAIL

PIK3IP1-DT--EIF4ENIF1

1.0

0.0

INCL_NON_REF_SPLICE

PIK3IP1-DT^ENSG00000228839.5

chr22:31337813:+

EIF4ENIF1^ENSG00000184708.18

chr22:31488745:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1451:39250:29669

YES_LDAS

0.0034

1.9329

"[""INTRACHROMOSOMAL[chr22:0.10Mb]"",""LOCAL_INVERSION:+:-:[98956]""]"

chr22:31337813-chr22:31488745

False

Read

count

too

low:

FAIL

PIK3C3--RPRD1A

1.0

0.0

ONLY_REF_SPLICE

PIK3C3^ENSG00000078142.13

chr18:41970456:+

RPRD1A^ENSG00000141425.18

chr18:35993300:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1244:46280:10935

YES_LDAS

0.0034

1.9656

1.7819

"[""INTRACHROMOSOMAL[chr18:5.89Mb]""]"

chr18:41970456-chr18:35993300

False

Read

count

too

low:

FAIL

PIK3C2A--C11orf24

1.0

0.0

INCL_NON_REF_SPLICE

PIK3C2A^ENSG00000011405.13

chr11:17147513:-

C11orf24^ENSG00000171067.11

chr11:68267347:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1272:27915:22621

NO_LDAS

0.0034

1.9329

1.6895

"[""INTRACHROMOSOMAL[chr11:51.05Mb]""]"

chr11:17147513-chr11:68267347

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PI4KAP1--TNXA

0.25

0.0

INCL_NON_REF_SPLICE

PI4KAP1^ENSG00000274602.5

chr22:18548697:-

TNXA^ENSG00000248290.1

chr6:32010311:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1283:23628:15363

NO_LDAS

0.0009

1.6049

1.5546

"[""INTERCHROMOSOMAL[chr22--chr6]""]"

chr22:18548697-chr6:32010311

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PI4K2B--STIM2

1.0

0.0

ONLY_REF_SPLICE

PI4K2B^ENSG00000038210.14

chr4:25234431:+

STIM2^ENSG00000109689.19

chr4:26919504:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1202:4851:21542

YES_LDAS

0.0034

1.7819

1.8892

"[""INTRACHROMOSOMAL[chr4:1.58Mb]""]"

chr4:25234431-chr4:26919504

False

Read

count

too

low:

FAIL

PHKG1P2--CYP4F11

1.0

0.0

INCL_NON_REF_SPLICE

PHKG1P2^ENSG00000228645.2

chr7:63509608:+

CYP4F11^ENSG00000171903.16

chr19:15914387:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1485:23191:9730

NO_LDAS

0.0034

1.9329

1.7968

"[""INTERCHROMOSOMAL[chr7--chr19]""]"

chr7:63509608-chr19:15914387

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PHIP--FAM120B

1.0

0.0

ONLY_REF_SPLICE

PHIP^ENSG00000146247.14

chr6:79060478:-

FAM120B^ENSG00000112584.14

chr6:170317370:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2286:30739:15349

YES_LDAS

0.0034

1.8295

1.9086

"[""INTRACHROMOSOMAL[chr6:91.21Mb]""]"

chr6:79060478-chr6:170317370

False

Read

count

too

low:

FAIL

PHB2--PDIA5

1.0

0.0

ONLY_REF_SPLICE

PHB2^ENSG00000215021.10

chr12:6970196:-

PDIA5^ENSG00000065485.20

chr3:123146099:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1176:27470:9856

YES_LDAS

0.0034

1.9329

1.8062

"[""INTERCHROMOSOMAL[chr12--chr3]""]"

chr12:6970196-chr3:123146099

False

Read

count

too

low:

FAIL

PHACTR4--AC010168.2

1.0

0.0

INCL_NON_REF_SPLICE

PHACTR4^ENSG00000204138.13

chr1:28480604:+

AC010168.2^ENSG00000261324.2

chr12:14767693:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2377:17164:21906

NO_LDAS

0.0034

1.8323

1.7232

"[""INTERCHROMOSOMAL[chr1--chr12]""]"

chr1:28480604-chr12:14767693

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PHACTR2--INPP5D

1.0

0.0

ONLY_REF_SPLICE

PHACTR2^ENSG00000112419.14

chr6:143537207:+

INPP5D^ENSG00000168918.14

chr2:233146162:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1198:2861:12406

NO_LDAS

0.0034

1.9219

1.8062

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:143537207-chr2:233146162

False

Read

count

too

low:

FAIL

PGF--KIAA0586

1.0

0.0

INCL_NON_REF_SPLICE

PGF^ENSG00000119630.14

chr14:74944552:-

KIAA0586^ENSG00000100578.18

chr14:58548111:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1222:31548:12154

NO_LDAS

0.0034

0.9056

1.5628

"[""INTRACHROMOSOMAL[chr14:16.39Mb]""]"

chr14:74944552-chr14:58548111

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PGD--SMARCD2

1.0

0.0

INCL_NON_REF_SPLICE

PGD^ENSG00000142657.21

chr1:10404181:+

SMARCD2^ENSG00000108604.16

chr17:63833170:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1339:19874:3452

NO_LDAS

0.0034

1.9329

1.9656

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:10404181-chr17:63833170

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PGAM5--TAF1D

1.0

0.0

INCL_NON_REF_SPLICE

PGAM5^ENSG00000247077.7

chr12:132711328:+

TAF1D^ENSG00000166012.17

chr11:93739331:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2386:28967:18501

NO_LDAS

0.0034

1.7056

1.6402

"[""INTERCHROMOSOMAL[chr12--chr11]""]"

chr12:132711328-chr11:93739331

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PFKFB3--MGMT

1.0

0.0

ONLY_REF_SPLICE

PFKFB3^ENSG00000170525.21

chr10:6145013:+

MGMT^ENSG00000170430.10

chr10:129536241:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1208:6590:5498

YES_LDAS

0.0034

1.9899

1.8062

"[""INTRACHROMOSOMAL[chr10:123.21Mb]""]"

chr10:6145013-chr10:129536241

False

Read

count

too

low:

FAIL

PFDN6--MSH2

1.0

0.0

INCL_NON_REF_SPLICE

PFDN6^ENSG00000204220.12

chr6:33289719:+

MSH2^ENSG00000095002.15

chr2:47510088:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2216:25124:8483

NO_LDAS

0.0034

1.1033

1.9656

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:33289719-chr2:47510088

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PEX5--VRTN

1.0

0.0

INCL_NON_REF_SPLICE

PEX5^ENSG00000139197.11

chr12:7203551:+

VRTN^ENSG00000133980.5

chr14:74358923:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1186:10805:17506

NO_LDAS

0.0034

1.9656

1.8295

"[""INTERCHROMOSOMAL[chr12--chr14]""]"

chr12:7203551-chr14:74358923

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PERP--RAB10

1.0

0.0

ONLY_REF_SPLICE

PERP^ENSG00000112378.12

chr6:138107127:-

RAB10^ENSG00000084733.11

chr2:26098662:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2332:17366:22173

NO_LDAS

0.0034

1.9656

1.8295

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:138107127-chr2:26098662

False

Read

count

too

low:

FAIL

PDGFC--ZFP41

0.5

0.0

INCL_NON_REF_SPLICE

PDGFC^ENSG00000145431.11

chr4:156970782:-

ZFP41^ENSG00000181638.20

chr8:143249850:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2457:38578:18922

NO_LDAS

0.0017

1.7056

1.8256

"[""INTERCHROMOSOMAL[chr4--chr8]""]"

chr4:156970782-chr8:143249850

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PDE8A--LINC01340

1.0

0.0

ONLY_REF_SPLICE

PDE8A^ENSG00000073417.15

chr15:84982348:+

LINC01340^ENSG00000250331.2

chr5:97681753:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2276:26767:13625

NO_LDAS

0.0034

1.5058

1.9086

"[""INTERCHROMOSOMAL[chr15--chr5]""]"

chr15:84982348-chr5:97681753

False

Read

count

too

low:

FAIL

PDE4D--PDE4B

1.0

0.0

ONLY_REF_SPLICE

PDE4D^ENSG00000113448.19

chr5:59768247:-

PDE4B^ENSG00000184588.18

chr1:66247460:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1466:20367:18543

NO_LDAS

0.0034

1.9656

1.8256

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr5--chr1]""]"

chr5:59768247-chr1:66247460

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

PDE4C--ZBED4

1.0

0.0

ONLY_REF_SPLICE

PDE4C^ENSG00000105650.22

chr19:18232950:-

ZBED4^ENSG00000100426.7

chr22:49883334:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1486:17617:11285

YES_LDAS

0.0034

1.8062

1.9086

"[""INTERCHROMOSOMAL[chr19--chr22]""]"

chr19:18232950-chr22:49883334

False

Read

count

too

low:

FAIL

PDE2A--KCTD16

1.0

0.0

INCL_NON_REF_SPLICE

PDE2A^ENSG00000186642.16

chr11:72608665:-

KCTD16^ENSG00000183775.11

chr5:144206726:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2138:37907:22887

NO_LDAS

0.0034

1.7465

1.9329

"[""INTERCHROMOSOMAL[chr11--chr5]""]"

chr11:72608665-chr5:144206726

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PDE1B--RASGRP1

0.5

0.0

INCL_NON_REF_SPLICE

PDE1B^ENSG00000123360.12

chr12:54549620:+

RASGRP1^ENSG00000172575.12

chr15:38564715:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1103:14017:18950

NO_LDAS

0.0017

0.9183

1.2729

"[""INTERCHROMOSOMAL[chr12--chr15]""]"

chr12:54549620-chr15:38564715

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PCYOX1L--DOCK2

1.0

0.0

ONLY_REF_SPLICE

PCYOX1L^ENSG00000145882.11

chr5:149358156:+

DOCK2^ENSG00000134516.18

chr5:169684196:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1276:35811:8104

YES_LDAS

0.0034

1.8256

1.6895

"[""INTRACHROMOSOMAL[chr5:20.27Mb]""]"

chr5:149358156-chr5:169684196

False

Read

count

too

low:

FAIL

PCMTD1--HOOK3

1.0

0.0

ONLY_REF_SPLICE

PCMTD1^ENSG00000168300.14

chr8:51845661:-

HOOK3^ENSG00000168172.9

chr8:42925557:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1109:20513:9519

YES_LDAS

0.0034

1.7819

1.8892

"[""INTRACHROMOSOMAL[chr8:8.79Mb]""]"

chr8:51845661-chr8:42925557

False

Read

count

too

low:

FAIL

PCK1--PCK2

1.0

0.0

ONLY_REF_SPLICE

PCK1^ENSG00000124253.11

chr20:57563215:+

PCK2^ENSG00000100889.12

chr14:24099558:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2239:21476:1687

NO_LDAS

0.0034

1.9329

1.9219

"[""ChimerSeq"",""INTERCHROMOSOMAL[chr20--chr14]""]"

chr20:57563215-chr14:24099558

False

Read

count

too

low:

FAIL

PCGF7P--COL20A1

1.0

0.0

INCL_NON_REF_SPLICE

PCGF7P^ENSG00000268140.1

chr19:22138051:+

COL20A1^ENSG00000101203.16

chr20:63305949:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1155:47526:26685

NO_LDAS

0.0034

1.6895

0.9056

"[""INTERCHROMOSOMAL[chr19--chr20]""]"

chr19:22138051-chr20:63305949

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PCED1A--AL049775.1

1.0

0.0

INCL_NON_REF_SPLICE

PCED1A^ENSG00000132635.17

chr20:2838232:-

AL049775.1^ENSG00000205562.3

chr14:85531189:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2409:4940:18557

NO_LDAS

0.0034

1.8062

1.5546

"[""INTERCHROMOSOMAL[chr20--chr14]""]"

chr20:2838232-chr14:85531189

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PCDHGA4--PCM1

1.0

0.0

INCL_NON_REF_SPLICE

PCDHGA4^ENSG00000262576.3

chr5:141357621:+

PCM1^ENSG00000078674.18

chr8:17989859:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2106:49621:18067

YES_LDAS

0.0034

1.9329

1.8062

"[""INTERCHROMOSOMAL[chr5--chr8]""]"

chr5:141357621-chr8:17989859

False

Read

count

too

low:

FAIL

PCDHA4--PEAK1

1.0

0.0

INCL_NON_REF_SPLICE

PCDHA4^ENSG00000204967.12

chr5:140809572:+

PEAK1^ENSG00000173517.10

chr15:77133715:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2195:18313:10725

NO_LDAS

0.0034

1.9656

1.5058

"[""INTERCHROMOSOMAL[chr5--chr15]""]"

chr5:140809572-chr15:77133715

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PCBP3--PCBP4

1.0

0.0

ONLY_REF_SPLICE

PCBP3^ENSG00000183570.17

chr21:45899622:+

PCBP4^ENSG00000090097.22

chr3:51960898:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2329:2011:2611

NO_LDAS

0.0034

1.9086

1.8323

"[""INTERCHROMOSOMAL[chr21--chr3]""]"

chr21:45899622-chr3:51960898

False

Read

count

too

low:

FAIL

PAWR--BARX2

1.0

0.0

INCL_NON_REF_SPLICE

PAWR^ENSG00000177425.11

chr12:79689729:-

BARX2^ENSG00000043039.7

chr11:129409722:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2482:6105:17941

YES_LDAS

0.0034

1.8892

"[""INTERCHROMOSOMAL[chr12--chr11]""]"

chr12:79689729-chr11:129409722

False

Read

count

too

low:

FAIL

PARVA--TEAD1

1.0

0.0

ONLY_REF_SPLICE

PARVA^ENSG00000197702.14

chr11:12377783:+

TEAD1^ENSG00000187079.20

chr11:12862250:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1338:4398:25129

YES_LDAS

0.0034

1.4295

1.5656

"[""Klijn_CellLines"",""INTRACHROMOSOMAL[chr11:0.14Mb]""]"

chr11:12377783-chr11:12862250

False

Read

count

too

low:

FAIL

PARP6--EXOC6B

1.0

0.0

INCL_NON_REF_SPLICE

PARP6^ENSG00000137817.17

chr15:72244895:-

EXOC6B^ENSG00000144036.16

chr2:72335020:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1261:50244:2471

YES_LDAS

0.0034

1.9899

"[""INTERCHROMOSOMAL[chr15--chr2]""]"

chr15:72244895-chr2:72335020

False

Read

count

too

low:

FAIL

PAM--RANBP3

1.0

0.0

INCL_NON_REF_SPLICE

PAM^ENSG00000145730.20

chr5:103019843:+

RANBP3^ENSG00000031823.14

chr19:5933863:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1276:7181:5652

NO_LDAS

0.0034

1.8295

1.231

"[""INTERCHROMOSOMAL[chr5--chr19]""]"

chr5:103019843-chr19:5933863

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PAK2--TFRC

1.0

0.0

ONLY_REF_SPLICE

PAK2^ENSG00000180370.10

chr3:196740157:+

TFRC^ENSG00000072274.13

chr3:196077122:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1345:31338:29557

YES_LDAS

0.0034

1.5656

1.5058

"[""INTRACHROMOSOMAL[chr3:0.66Mb]""]"

chr3:196740157-chr3:196077122

False

Read

count

too

low:

FAIL

PACSIN2--ARFGAP3

1.0

0.0

ONLY_REF_SPLICE

PACSIN2^ENSG00000100266.19

chr22:42876137:-

ARFGAP3^ENSG00000242247.11

chr22:42847632:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1232:48699:14172

YES_LDAS

0.0034

1.9656

1.231

"[""ConjoinG"",""INTRACHROMOSOMAL[chr22:0.02Mb]"",""NEIGHBORS_OVERLAP:-:-:[22694]""]"

chr22:42876137-chr22:42847632

True

pair|recurrent

breakpoints

Blacklisted

FAIL

PABPN1P2--SLIT2

0.5

0.0

INCL_NON_REF_SPLICE

PABPN1P2^ENSG00000255875.2

chr19:52809847:+

SLIT2^ENSG00000145147.20

chr4:20251998:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1403:15861:24975

NO_LDAS

0.0017

1.2419

0.9183

"[""INTERCHROMOSOMAL[chr19--chr4]""]"

chr19:52809847-chr4:20251998

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

PABPN1P2--NBPF26

0.5

0.0

INCL_NON_REF_SPLICE

PABPN1P2^ENSG00000255875.2

chr19:52809847:+

NBPF26^ENSG00000273136.7

chr1:120724130:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1403:15861:24975

NO_LDAS

0.0017

1.2419

0.9183

"[""INTERCHROMOSOMAL[chr19--chr1]""]"

chr19:52809847-chr1:120724130

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

OXR1--TMEM181

1.0

0.0

ONLY_REF_SPLICE

OXR1^ENSG00000164830.19

chr8:106658185:+

TMEM181^ENSG00000146433.9

chr6:158573420:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1260:14899:7614

YES_LDAS

0.0034

1.6895

1.7056

"[""INTERCHROMOSOMAL[chr8--chr6]""]"

chr8:106658185-chr6:158573420

False

Read

count

too

low:

FAIL

OXNAD1--RFTN1

1.0

0.0

ONLY_REF_SPLICE

OXNAD1^ENSG00000154814.14

chr3:16303592:+

RFTN1^ENSG00000131378.14

chr3:16434037:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2310:51271:3102

YES_LDAS

0.0034

1.053

1.7819

"[""INTRACHROMOSOMAL[chr3:0.04Mb]"",""NEIGHBORS_OVERLAP:+:-:[36725]""]"

chr3:16303592-chr3:16434037

False

Read

count

too

low:

FAIL

OVGP1--WDR77

1.0

0.0

ONLY_REF_SPLICE

OVGP1^ENSG00000085465.13

chr1:111423543:-

WDR77^ENSG00000116455.14

chr1:111447144:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1181:48521:8651

YES_LDAS

0.0034

1.7465

1.9329

"[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[12155]""]"

chr1:111423543-chr1:111447144

False

Read

count

too

low:

FAIL

OSBPL3--LINC01099

1.0

0.0

ONLY_REF_SPLICE

OSBPL3^ENSG00000070882.13

chr7:24815059:-

LINC01099^ENSG00000251504.1

chr4:177903948:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2127:17010:28730

NO_LDAS

0.0034

1.5219

1.8295

"[""INTERCHROMOSOMAL[chr7--chr4]""]"

chr7:24815059-chr4:177903948

False

Read

count

too

low:

FAIL

OSBPL2--PSMA7

1.0

0.0

ONLY_REF_SPLICE

OSBPL2^ENSG00000130703.17

chr20:62272259:+

PSMA7^ENSG00000101182.15

chr20:62140944:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2251:13159:6171

YES_LDAS

0.0034

1.7968

1.6895

"[""INTRACHROMOSOMAL[chr20:0.09Mb]"",""LOCAL_INVERSION:+:-:[88482]""]"

chr20:62272259-chr20:62140944

False

Read

count

too

low:

FAIL

OSBPL10--PXK

1.0

0.0

ONLY_REF_SPLICE

OSBPL10^ENSG00000144645.15

chr3:31876433:-

PXK^ENSG00000168297.16

chr3:58365874:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2343:40212:23910

YES_LDAS

0.0034

1.7465

1.7056

"[""INTRACHROMOSOMAL[chr3:26.26Mb]""]"

chr3:31876433-chr3:58365874

False

Read

count

too

low:

FAIL

OSBPL10--ATP13A3

1.0

0.0

ONLY_REF_SPLICE

OSBPL10^ENSG00000144645.15

chr3:31980899:-

ATP13A3^ENSG00000133657.16

chr3:194406116:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2306:32567:14059

YES_LDAS

0.0034

1.7465

1.8295

"[""INTRACHROMOSOMAL[chr3:162.33Mb]""]"

chr3:31980899-chr3:194406116

False

Read

count

too

low:

FAIL

ORC3--SESN3

1.0

0.0

ONLY_REF_SPLICE

ORC3^ENSG00000135336.16

chr6:87658018:+

SESN3^ENSG00000149212.12

chr11:95189961:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2477:3759:23686

YES_LDAS

0.0034

1.9086

1.9899

"[""INTERCHROMOSOMAL[chr6--chr11]""]"

chr6:87658018-chr11:95189961

False

Read

count

too

low:

FAIL

OR7E38P--OR7E22P

0.33

0.0

INCL_NON_REF_SPLICE

OR7E38P^ENSG00000183444.10

chr7:97966814:-

OR7E22P^ENSG00000179799.9

chr3:75357297:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1151:29194:1575

NO_LDAS

0.0011

1.7819

1.2419

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr7--chr3]""]"

chr7:97966814-chr3:75357297

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

OLIG3--LHX6

1.0

0.0

INCL_NON_REF_SPLICE

OLIG3^ENSG00000177468.7

chr6:137493374:-

LHX6^ENSG00000106852.15

chr9:122228677:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2387:21087:25900

NO_LDAS

0.0034

1.7056

1.231

"[""INTERCHROMOSOMAL[chr6--chr9]""]"

chr6:137493374-chr9:122228677

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

OAS3--BCKDK

1.0

0.0

INCL_NON_REF_SPLICE

OAS3^ENSG00000111331.14

chr12:112964376:+

BCKDK^ENSG00000103507.14

chr16:31110064:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2134:18054:17647

YES_LDAS

0.0034

1.9656

1.8323

"[""INTERCHROMOSOMAL[chr12--chr16]""]"

chr12:112964376-chr16:31110064

False

Read

count

too

low:

FAIL

NUTM2A-AS1--XPNPEP1

0.5

0.0

ONLY_REF_SPLICE

NUTM2A-AS1^ENSG00000223482.8

chr10:87288442:-

XPNPEP1^ENSG00000108039.18

chr10:109873427:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2104:35083:27581

YES_LDAS

0.0017

1.5329

1.8256

"[""INTRACHROMOSOMAL[chr10:22.52Mb]""]"

chr10:87288442-chr10:109873427

False

Read

count

too

low:

FAIL

NUPR1--ZDHHC3

0.5

0.0

INCL_NON_REF_SPLICE

NUPR1^ENSG00000176046.9

chr16:28538026:-

ZDHHC3^ENSG00000163812.15

chr3:44916401:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1238:25998:11117

NO_LDAS

0.0017

1.4566

1.6895

"[""INTERCHROMOSOMAL[chr16--chr3]""]"

chr16:28538026-chr3:44916401

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NUP98--STIM1

1.0

0.0

ONLY_REF_SPLICE

NUP98^ENSG00000110713.17

chr11:3712564:-

STIM1^ENSG00000167323.12

chr11:3967552:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1131:31418:15517

YES_LDAS

0.0034

1.7232

1.8892

"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""LOCAL_INVERSION:-:+:[56735]""]"

chr11:3712564-chr11:3967552

False

Read

count

too

low:

FAIL

NUDT18--DOCK1

1.0

0.0

ONLY_REF_SPLICE

NUDT18^ENSG00000275074.2

chr8:22108133:-

DOCK1^ENSG00000150760.13

chr10:126970702:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1186:36814:9029

YES_LDAS

0.0034

1.7232

1.6402

"[""INTERCHROMOSOMAL[chr8--chr10]""]"

chr8:22108133-chr10:126970702

False

Read

count

too

low:

FAIL

NUBPL--ATG14

0.5

0.0

ONLY_REF_SPLICE

NUBPL^ENSG00000151413.17

chr14:31562885:+

ATG14^ENSG00000126775.9

chr14:55378074:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1389:39347:22074

NO_LDAS

0.0017

1.8892

1.7819

"[""INTRACHROMOSOMAL[chr14:23.51Mb]""]"

chr14:31562885-chr14:55378074

False

Read

count

too

low:

FAIL

NUB1--SLC35E2B

1.0

0.0

INCL_NON_REF_SPLICE

NUB1^ENSG00000013374.17

chr7:151369052:+

SLC35E2B^ENSG00000189339.12

chr1:1663516:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1429:2642:17577

YES_LDAS

0.0034

1.9086

1.7819

"[""INTERCHROMOSOMAL[chr7--chr1]""]"

chr7:151369052-chr1:1663516

False

Read

count

too

low:

FAIL

NTN1--SYPL2

1.0

0.0

INCL_NON_REF_SPLICE

NTN1^ENSG00000065320.9

chr17:9243902:+

SYPL2^ENSG00000143028.9

chr1:109476632:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2242:51781:4321

NO_LDAS

0.0034

0.3534

1.9329

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:9243902-chr1:109476632

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NT5DC3--AC024901.1

1.0

0.0

ONLY_REF_SPLICE

NT5DC3^ENSG00000111696.12

chr12:103806322:-

AC024901.1^ENSG00000255910.2

chr12:20009721:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2321:34460:8875

NO_LDAS

0.0034

1.9656

1.8892

"[""INTRACHROMOSOMAL[chr12:83.76Mb]""]"

chr12:103806322-chr12:20009721

False

Read

count

too

low:

FAIL

NSL1--DNMT3L

1.0

0.0

INCL_NON_REF_SPLICE

NSL1^ENSG00000117697.15

chr1:212728863:-

DNMT3L^ENSG00000142182.9

chr21:44258667:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2347:21710:10640

NO_LDAS

0.0034

1.3753

1.4295

"[""INTERCHROMOSOMAL[chr1--chr21]""]"

chr1:212728863-chr21:44258667

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NSL1--CEACAM8

0.5

0.0

INCL_NON_REF_SPLICE

NSL1^ENSG00000117697.15

chr1:212766150:-

CEACAM8^ENSG00000124469.12

chr19:42581099:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1388:24057:11874

YES_LDAS

0.0017

1.231

0.3534

"[""INTERCHROMOSOMAL[chr1--chr19]""]"

chr1:212766150-chr19:42581099

False

Read

count

too

low:

FAIL

NRBP2--MBTPS2

1.0

0.0

INCL_NON_REF_SPLICE

NRBP2^ENSG00000185189.18

chr8:143839172:-

MBTPS2^ENSG00000012174.12

chrX:21856827:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2132:10093:23728

NO_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr8--chrX]""]"

chr8:143839172-chrX:21856827

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NPTN--NEO1

1.0

0.0

ONLY_REF_SPLICE

NPTN^ENSG00000156642.17

chr15:73633125:-

NEO1^ENSG00000067141.17

chr15:73236347:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2244:33182:27091

NO_LDAS

0.0034

1.7819

1.5058

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr15:0.25Mb]""]"

chr15:73633125-chr15:73236347

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

NPHP4--ATOH7

1.0

0.0

INCL_NON_REF_SPLICE

NPHP4^ENSG00000131697.18

chr1:5863997:-

ATOH7^ENSG00000179774.9

chr10:68231657:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2274:29736:3186

NO_LDAS

0.0034

1.3383

0.9968

"[""INTERCHROMOSOMAL[chr1--chr10]""]"

chr1:5863997-chr10:68231657

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NOXO1--FBXO34

1.0

0.0

INCL_NON_REF_SPLICE

NOXO1^ENSG00000196408.12

chr16:1982675:-

FBXO34^ENSG00000178974.11

chr14:55350807:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1277:44160:23378

NO_LDAS

0.0034

1.7232

1.8892

"[""INTERCHROMOSOMAL[chr16--chr14]""]"

chr16:1982675-chr14:55350807

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NOS2P1--PPIL2

1.0

0.0

ONLY_REF_SPLICE

NOS2P1^ENSG00000265788.2

chr17:27665613:-

PPIL2^ENSG00000100023.20

chr22:21675064:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1234:18984:23209

NO_LDAS

0.0034

1.8256

1.6402

"[""INTERCHROMOSOMAL[chr17--chr22]""]"

chr17:27665613-chr22:21675064

False

Read

count

too

low:

FAIL

NOS1AP--ATF6

1.0

0.0

ONLY_REF_SPLICE

NOS1AP^ENSG00000198929.13

chr1:162070282:+

ATF6^ENSG00000118217.7

chr1:161846449:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1327:17099:2037

YES_LDAS

0.0034

1.9656

1.9086

"[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr1:0.09Mb]"",""LOCAL_REARRANGEMENT:+:[92117]""]"

chr1:162070282-chr1:161846449

False

Read

count

too

low:

FAIL

NOL6--CAVIN3

1.0

0.0

INCL_NON_REF_SPLICE

NOL6^ENSG00000165271.17

chr9:33466367:-

CAVIN3^ENSG00000170955.10

chr11:6320330:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2371:23603:12518

NO_LDAS

0.0034

1.7968

1.6402

"[""INTERCHROMOSOMAL[chr9--chr11]""]"

chr9:33466367-chr11:6320330

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NOL10--ARHGEF26-AS1

0.5

0.0

INCL_NON_REF_SPLICE

NOL10^ENSG00000115761.16

chr2:10689796:-

ARHGEF26-AS1^ENSG00000243069.8

chr3:154039500:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1279:2553:10949

YES_LDAS

0.0017

1.9656

1.6895

"[""INTERCHROMOSOMAL[chr2--chr3]""]"

chr2:10689796-chr3:154039500

False

Read

count

too

low:

FAIL

NLRP1--SLC25A24P1

0.5

0.0

INCL_NON_REF_SPLICE

NLRP1^ENSG00000091592.16

chr17:5530481:-

SLC25A24P1^ENSG00000241361.8

chr1:108273285:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1235:38837:26208

NO_LDAS

0.0017

1.9329

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:5530481-chr1:108273285

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NLRC3--TRMT1

0.2

0.0

INCL_NON_REF_SPLICE

NLRC3^ENSG00000167984.18

chr16:3550478:-

TRMT1^ENSG00000104907.13

chr19:13104991:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2120:50050:25564

NO_LDAS

0.0007

1.9086

1.5329

"[""INTERCHROMOSOMAL[chr16--chr19]""]"

chr16:3550478-chr19:13104991

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NIT2--TMEM231

1.0

0.0

INCL_NON_REF_SPLICE

NIT2^ENSG00000114021.12

chr3:100335056:+

TMEM231^ENSG00000205084.11

chr16:75556040:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2108:20974:6955

NO_LDAS

0.0034

1.231

1.2729

"[""INTERCHROMOSOMAL[chr3--chr16]""]"

chr3:100335056-chr16:75556040

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NIPAL1--NWD2

1.0

0.0

INCL_NON_REF_SPLICE

NIPAL1^ENSG00000163293.12

chr4:47914232:+

NWD2^ENSG00000174145.8

chr4:37356388:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2121:10943:17689

NO_LDAS

0.0034

0.3534

1.5219

"[""INTRACHROMOSOMAL[chr4:10.46Mb]""]"

chr4:47914232-chr4:37356388

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NIPA1--GLDC

1.0

0.0

INCL_NON_REF_SPLICE

NIPA1^ENSG00000170113.16

chr15:22812253:+

GLDC^ENSG00000178445.10

chr9:6606138:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1173:23482:9113

YES_LDAS

0.0034

1.8892

1.9899

"[""INTERCHROMOSOMAL[chr15--chr9]""]"

chr15:22812253-chr9:6606138

False

Read

count

too

low:

FAIL

NIM1K--PLEKHA8

0.33

0.0

ONLY_REF_SPLICE

NIM1K^ENSG00000177453.7

chr5:43242944:+

PLEKHA8^ENSG00000106086.20

chr7:30045085:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1228:24170:16974

NO_LDAS

0.0011

1.9329

"[""INTERCHROMOSOMAL[chr5--chr7]""]"

chr5:43242944-chr7:30045085

False

Read

count

too

low:

FAIL

NGRN--ZNF774

1.0

0.0

ONLY_REF_SPLICE

NGRN^ENSG00000182768.9

chr15:90266398:+

ZNF774^ENSG00000196391.11

chr15:90354642:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1149:40641:6717

YES_LDAS

0.0034

1.9086

1.9899

"[""INTRACHROMOSOMAL[chr15:0.08Mb]"",""NEIGHBORS[76506]""]"

chr15:90266398-chr15:90354642

True

pair|recurrent

breakpoints

Blacklisted

FAIL

NFKB1--TMEM159

1.0

0.0

INCL_NON_REF_SPLICE

NFKB1^ENSG00000109320.13

chr4:102501788:+

TMEM159^ENSG00000011638.11

chr16:21161176:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2375:18337:5246

NO_LDAS

0.0034

1.6895

1.9219

"[""INTERCHROMOSOMAL[chr4--chr16]""]"

chr4:102501788-chr16:21161176

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NFKB1--SCN2A

0.5

0.0

INCL_NON_REF_SPLICE

NFKB1^ENSG00000109320.13

chr4:102582945:+

SCN2A^ENSG00000136531.18

chr2:165314098:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1448:27843:5736

NO_LDAS

0.0017

1.7819

1.8892

"[""INTERCHROMOSOMAL[chr4--chr2]""]"

chr4:102582945-chr2:165314098

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NFKB1--ATP6V1G1

0.5

0.0

INCL_NON_REF_SPLICE

NFKB1^ENSG00000109320.13

chr4:102582945:+

ATP6V1G1^ENSG00000136888.8

chr9:114592582:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1448:27843:5736

NO_LDAS

0.0017

1.7819

1.9086

"[""INTERCHROMOSOMAL[chr4--chr9]""]"

chr4:102582945-chr9:114592582

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NFAT5--CRH

1.0

0.0

INCL_NON_REF_SPLICE

NFAT5^ENSG00000102908.22

chr16:69566238:+

CRH^ENSG00000147571.5

chr8:66177188:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1463:51126:12995

NO_LDAS

0.0034

1.6729

1.4295

"[""INTERCHROMOSOMAL[chr16--chr8]""]"

chr16:69566238-chr8:66177188

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NEXN--ZNF232-AS1

0.33

0.0

INCL_NON_REF_SPLICE

NEXN^ENSG00000162614.19

chr1:77942208:+

ZNF232-AS1^ENSG00000234327.8

chr17:5111583:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1492:21573:12224

NO_LDAS

0.0011

1.7465

0.9183

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:77942208-chr17:5111583

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NEXN--SUPT16H

0.33

0.0

INCL_NON_REF_SPLICE

NEXN^ENSG00000162614.19

chr1:77942208:+

SUPT16H^ENSG00000092201.10

chr14:21351822:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1492:21573:12224

NO_LDAS

0.0011

1.7465

0.9183

"[""INTERCHROMOSOMAL[chr1--chr14]""]"

chr1:77942208-chr14:21351822

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NEXN--AKAP17BP

0.33

0.0

INCL_NON_REF_SPLICE

NEXN^ENSG00000162614.19

chr1:77942208:+

AKAP17BP^ENSG00000214992.6

chrX:119254757:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1492:21573:12224

NO_LDAS

0.0011

1.7465

0.9183

"[""INTERCHROMOSOMAL[chr1--chrX]""]"

chr1:77942208-chrX:119254757

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NEU4--NAT14

0.5

0.0

INCL_NON_REF_SPLICE

NEU4^ENSG00000204099.12

chr2:241816529:+

NAT14^ENSG00000090971.5

chr19:55486109:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1326:43917:17044

NO_LDAS

0.0017

1.8062

1.3753

"[""INTERCHROMOSOMAL[chr2--chr19]""]"

chr2:241816529-chr19:55486109

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NELFA--CTNNA3

0.5

0.0

ONLY_REF_SPLICE

NELFA^ENSG00000185049.16

chr4:2008750:-

CTNNA3^ENSG00000183230.17

chr10:66520773:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2270:37478:24358

NO_LDAS

0.0017

1.7465

1.8323

"[""INTERCHROMOSOMAL[chr4--chr10]""]"

chr4:2008750-chr10:66520773

False

Read

count

too

low:

FAIL

NEK7--C1QTNF7

1.0

0.0

ONLY_REF_SPLICE

NEK7^ENSG00000151414.15

chr1:198157276:+

C1QTNF7^ENSG00000163145.13

chr4:15435736:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2243:5919:23784

YES_LDAS

0.0034

1.7465

1.9329

"[""INTERCHROMOSOMAL[chr1--chr4]""]"

chr1:198157276-chr4:15435736

False

Read

count

too

low:

FAIL

NEK6--AP005018.2

0.5

0.0

ONLY_REF_SPLICE

NEK6^ENSG00000119408.17

chr9:124258085:+

AP005018.2^ENSG00000254851.1

chr11:117136519:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2179:13135:3354

YES_LDAS

0.0017

0.9183

1.9656

"[""INTERCHROMOSOMAL[chr9--chr11]""]"

chr9:124258085-chr11:117136519

False

Read

count

too

low:

FAIL

NEK4--TMEM41A

1.0

0.0

ONLY_REF_SPLICE

NEK4^ENSG00000114904.13

chr3:52743352:-

TMEM41A^ENSG00000163900.11

chr3:185481311:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2170:4762:18894

YES_LDAS

0.0034

1.9656

"[""INTRACHROMOSOMAL[chr3:132.71Mb]""]"

chr3:52743352-chr3:185481311

False

Read

count

too

low:

FAIL

NEK10--GLUL

1.0

0.0

INCL_NON_REF_SPLICE

NEK10^ENSG00000163491.16

chr3:27309704:-

GLUL^ENSG00000135821.19

chr1:182380135:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1274:34161:7964

NO_LDAS

0.0034

1.9899

1.9656

"[""INTERCHROMOSOMAL[chr3--chr1]""]"

chr3:27309704-chr1:182380135

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NECTIN3--NYAP2

1.0

0.0

INCL_NON_REF_SPLICE

NECTIN3^ENSG00000177707.11

chr3:111147484:+

NYAP2^ENSG00000144460.12

chr2:225399792:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2251:4786:1757

NO_LDAS

0.0034

1.8892

1.7968

"[""INTERCHROMOSOMAL[chr3--chr2]""]"

chr3:111147484-chr2:225399792

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NEBL--FER1L4

1.0

0.0

INCL_NON_REF_SPLICE

NEBL^ENSG00000078114.19

chr10:20818341:-

FER1L4^ENSG00000088340.17

chr20:35595841:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1478:50592:14872

NO_LDAS

0.0034

1.7968

1.9329

"[""INTERCHROMOSOMAL[chr10--chr20]""]"

chr10:20818341-chr20:35595841

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NDUFA7--SMG1P1

0.33

0.0

ONLY_REF_SPLICE

NDUFA7^ENSG00000267855.6

chr19:8319301:-

SMG1P1^ENSG00000237296.9

chr16:22454702:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1346:14365:6913

YES_LDAS

0.0011

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr19--chr16]""]"

chr19:8319301-chr16:22454702

True

pair|recurrent

breakpoints

Blacklisted

FAIL

NDUFA3--PUM3

1.0

0.0

INCL_NON_REF_SPLICE

NDUFA3^ENSG00000170906.16

chr19:54102993:+

PUM3^ENSG00000080608.10

chr9:2834160:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1162:20958:14914

NO_LDAS

0.0034

1.8295

1.5219

"[""INTERCHROMOSOMAL[chr19--chr9]""]"

chr19:54102993-chr9:2834160

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NDUFA1--NUDT21

1.0

0.0

INCL_NON_REF_SPLICE

NDUFA1^ENSG00000125356.7

chrX:119872013:+

NUDT21^ENSG00000167005.14

chr16:56431557:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1388:46328:6030

NO_LDAS

0.0034

1.7819

1.5656

"[""INTERCHROMOSOMAL[chrX--chr16]""]"

chrX:119872013-chr16:56431557

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NDOR1--AP003393.1

1.0

0.0

INCL_NON_REF_SPLICE

NDOR1^ENSG00000188566.14

chr9:137206309:+

AP003393.1^ENSG00000254561.4

chr11:119641916:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2468:12868:13093

YES_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr9--chr11]""]"

chr9:137206309-chr11:119641916

False

Read

count

too

low:

FAIL

NDFIP2--MAP1LC3B2

0.5

0.0

INCL_NON_REF_SPLICE

NDFIP2^ENSG00000102471.14

chr13:79551116:+

MAP1LC3B2^ENSG00000258102.5

chr12:116560058:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1410:17771:3144

YES_LDAS

0.0017

1.4256

1.7232

"[""INTERCHROMOSOMAL[chr13--chr12]""]"

chr13:79551116-chr12:116560058

False

Read

count

too

low:

FAIL

NCOA7--RNF217

1.0

0.0

ONLY_REF_SPLICE

NCOA7^ENSG00000111912.20

chr6:125890810:+

RNF217^ENSG00000146373.16

chr6:125057942:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1455:39128:4685

YES_LDAS

0.0034

1.8892

1.8295

"[""INTRACHROMOSOMAL[chr6:0.69Mb]""]"

chr6:125890810-chr6:125057942

False

Read

count

too

low:

FAIL

NCEH1--USP13

1.0

0.0

ONLY_REF_SPLICE

NCEH1^ENSG00000144959.11

chr3:172710847:-

USP13^ENSG00000058056.10

chr3:179754732:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1169:43392:8398

YES_LDAS

0.0034

1.8892

1.6402

"[""INTRACHROMOSOMAL[chr3:6.94Mb]""]"

chr3:172710847-chr3:179754732

False

Read

count

too

low:

FAIL

NBR2--RUNDC1

1.0

0.0

ONLY_REF_SPLICE

NBR2^ENSG00000198496.12

chr17:43125770:+

RUNDC1^ENSG00000198863.7

chr17:42987256:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2117:9867:9491

NO_LDAS

0.0034

1.9329

1.5628

"[""INTRACHROMOSOMAL[chr17:0.13Mb]""]"

chr17:43125770-chr17:42987256

False

Read

count

too

low:

FAIL

NAXD--VWA8

1.0

0.0

ONLY_REF_SPLICE

NAXD^ENSG00000213995.12

chr13:110627547:+

VWA8^ENSG00000102763.18

chr13:41891587:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2137:4374:27609

YES_LDAS

0.0034

1.9656

1.9086

"[""INTRACHROMOSOMAL[chr13:68.65Mb]""]"

chr13:110627547-chr13:41891587

False

Read

count

too

low:

FAIL

NASP--ZNF236

0.33

0.0

INCL_NON_REF_SPLICE

NASP^ENSG00000132780.17

chr1:45610995:+

ZNF236^ENSG00000130856.17

chr18:76849622:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1316:31451:23728

NO_LDAS

0.0011

1.8892

1.8256

"[""INTERCHROMOSOMAL[chr1--chr18]""]"

chr1:45610995-chr18:76849622

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NAPB--PPHLN1

1.0

0.0

ONLY_REF_SPLICE

NAPB^ENSG00000125814.17

chr20:23421305:-

PPHLN1^ENSG00000134283.18

chr12:42393570:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2365:37041:21360

YES_LDAS

0.0034

1.7465

1.9656

"[""INTERCHROMOSOMAL[chr20--chr12]""]"

chr20:23421305-chr12:42393570

False

Read

count

too

low:

FAIL

NAP1L4--FBXO3

1.0

0.0

ONLY_REF_SPLICE

NAP1L4^ENSG00000205531.13

chr11:2976024:-

FBXO3^ENSG00000110429.14

chr11:33747320:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1229:36183:20968

YES_LDAS

0.0034

1.8323

1.9086

"[""INTRACHROMOSOMAL[chr11:30.75Mb]""]"

chr11:2976024-chr11:33747320

False

Read

count

too

low:

FAIL

NAP1L1--TPP2

1.0

0.0

ONLY_REF_SPLICE

NAP1L1^ENSG00000187109.15

chr12:76084567:-

TPP2^ENSG00000134900.12

chr13:102657056:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2480:34654:18992

YES_LDAS

0.0034

1.9219

"[""INTERCHROMOSOMAL[chr12--chr13]""]"

chr12:76084567-chr13:102657056

False

Read

count

too

low:

FAIL

NAIP--SDCCAG8

0.2

0.0

ONLY_REF_SPLICE

NAIP^ENSG00000249437.8

chr5:70998724:-

SDCCAG8^ENSG00000054282.16

chr1:243286272:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1192:6736:7572

YES_LDAS

0.0007

1.9329

1.9656

"[""INTERCHROMOSOMAL[chr5--chr1]""]"

chr5:70998724-chr1:243286272

False

Read

count

too

low:

FAIL

NACA--RFX7

1.0

0.0

INCL_NON_REF_SPLICE

NACA^ENSG00000196531.14

chr12:56718322:-

RFX7^ENSG00000181827.15

chr15:56094134:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1270:50503:17324

NO_LDAS

0.0034

1.7819

1.8892

"[""INTERCHROMOSOMAL[chr12--chr15]""]"

chr12:56718322-chr15:56094134

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

NAA38--DPM2

1.0

0.0

INCL_NON_REF_SPLICE

NAA38^ENSG00000183011.13

chr17:7856770:-

DPM2^ENSG00000136908.18

chr9:127935482:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1497:36256:16357

YES_LDAS

0.0034

1.9219

1.9656

"[""INTERCHROMOSOMAL[chr17--chr9]""]"

chr17:7856770-chr9:127935482

False

Read

count

too

low:

FAIL

MYRF--INKA2

1.0

0.0

INCL_NON_REF_SPLICE

MYRF^ENSG00000124920.14

chr11:61771750:+

INKA2^ENSG00000197852.12

chr1:111726449:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1357:32001:7474

NO_LDAS

0.0034

1.5546

1.7819

"[""INTERCHROMOSOMAL[chr11--chr1]""]"

chr11:61771750-chr1:111726449

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MYOM1--ZFYVE26

1.0

0.0

ONLY_REF_SPLICE

MYOM1^ENSG00000101605.13

chr18:3149145:-

ZFYVE26^ENSG00000072121.17

chr14:67772210:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2390:9834:7109

YES_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr18--chr14]""]"

chr18:3149145-chr14:67772210

False

Read

count

too

low:

FAIL

MYO6--ASPH

1.0

0.0

INCL_NON_REF_SPLICE

MYO6^ENSG00000196586.16

chr6:75890216:+

ASPH^ENSG00000198363.18

chr8:61684165:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1331:35399:20141

NO_LDAS

0.0034

1.1589

1.5628

"[""INTERCHROMOSOMAL[chr6--chr8]""]"

chr6:75890216-chr8:61684165

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MYO15A--EIF4H

0.5

0.0

INCL_NON_REF_SPLICE

MYO15A^ENSG00000091536.19

chr17:18143735:+

EIF4H^ENSG00000106682.16

chr7:74194786:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1377:46539:21584

NO_LDAS

0.0017

1.6895

1.5656

"[""INTERCHROMOSOMAL[chr17--chr7]""]"

chr17:18143735-chr7:74194786

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MYO15A--AC026471.6

1.0

0.0

INCL_NON_REF_SPLICE

MYO15A^ENSG00000091536.19

chr17:18164681:+

AC026471.6^ENSG00000280132.1

chr16:31470559:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1329:30423:27890

YES_LDAS

0.0034

1.5656

1.4256

"[""INTERCHROMOSOMAL[chr17--chr16]""]"

chr17:18164681-chr16:31470559

False

Read

count

too

low:

FAIL

MYH10--FLRT2

1.0

0.0

ONLY_REF_SPLICE

MYH10^ENSG00000133026.13

chr17:8569720:-

FLRT2^ENSG00000185070.11

chr14:85561190:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1360:4891:27693

YES_LDAS

0.0034

1.7465

1.8892

"[""INTERCHROMOSOMAL[chr17--chr14]""]"

chr17:8569720-chr14:85561190

False

Read

count

too

low:

FAIL

MXRA7P1--USP1

1.0

0.0

INCL_NON_REF_SPLICE

MXRA7P1^ENSG00000232320.6

chr2:161340872:-

USP1^ENSG00000162607.13

chr1:62447470:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2416:27907:15601

NO_LDAS

0.0034

1.7819

1.7968

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:161340872-chr1:62447470

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MX1--CEP192

1.0

0.0

INCL_NON_REF_SPLICE

MX1^ENSG00000157601.15

chr21:41448935:+

CEP192^ENSG00000101639.18

chr18:13037243:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1381:26645:20281

NO_LDAS

0.0034

1.5329

1.6729

"[""INTERCHROMOSOMAL[chr21--chr18]""]"

chr21:41448935-chr18:13037243

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MVK--MYOSLID

1.0

0.0

ONLY_REF_SPLICE

MVK^ENSG00000110921.14

chr12:109591357:+

MYOSLID^ENSG00000229647.2

chr2:207245289:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2260:3378:20365

NO_LDAS

0.0034

1.9899

1.5219

"[""INTERCHROMOSOMAL[chr12--chr2]""]"

chr12:109591357-chr2:207245289

False

Read

count

too

low:

FAIL

MVB12A--CHID1

0.5

0.0

INCL_NON_REF_SPLICE

MVB12A^ENSG00000141971.13

chr19:17424948:+

CHID1^ENSG00000177830.18

chr11:899371:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2290:9114:16231

NO_LDAS

0.0017

1.9899

1.9656

"[""INTERCHROMOSOMAL[chr19--chr11]""]"

chr19:17424948-chr11:899371

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MTR--CDC73

1.0

0.0

ONLY_REF_SPLICE

MTR^ENSG00000116984.15

chr1:236863554:+

CDC73^ENSG00000134371.14

chr1:193203795:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2121:33101:22635

YES_LDAS

0.0034

1.9329

1.8892

"[""INTRACHROMOSOMAL[chr1:43.54Mb]""]"

chr1:236863554-chr1:193203795

False

Read

count

too

low:

FAIL

MTND2P28--SUPT6H

1.0

0.0

INCL_NON_REF_SPLICE

MTND2P28^ENSG00000225630.1

chr1:630491:+

SUPT6H^ENSG00000109111.15

chr17:28701040:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1225:19591:17506

YES_LDAS

0.0034

1.7819

1.6729

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:630491-chr17:28701040

False

Read

count

too

low:

FAIL

MTMR12--FIP1L1

1.0

0.0

ONLY_REF_SPLICE

MTMR12^ENSG00000150712.11

chr5:32312758:-

FIP1L1^ENSG00000145216.16

chr4:53399730:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2247:16929:17829

YES_LDAS

0.0034

1.9656

1.7056

"[""INTERCHROMOSOMAL[chr5--chr4]""]"

chr5:32312758-chr4:53399730

False

Read

count

too

low:

FAIL

MTG1--PXDN

1.0

0.0

ONLY_REF_SPLICE

MTG1^ENSG00000148824.19

chr10:133402773:+

PXDN^ENSG00000130508.11

chr2:1684151:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1197:38869:21612

YES_LDAS

0.0034

1.9656

1.8256

"[""INTERCHROMOSOMAL[chr10--chr2]""]"

chr10:133402773-chr2:1684151

False

Read

count

too

low:

FAIL

MTG1--LINC00632

1.0

0.0

INCL_NON_REF_SPLICE

MTG1^ENSG00000148824.19

chr10:133399226:+

LINC00632^ENSG00000203930.12

chrX:140776327:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2283:9503:16203

NO_LDAS

0.0034

1.7465

1.9086

"[""INTERCHROMOSOMAL[chr10--chrX]""]"

chr10:133399226-chrX:140776327

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MTG1--H19

1.0

0.0

INCL_NON_REF_SPLICE

MTG1^ENSG00000148824.19

chr10:133420091:+

H19^ENSG00000130600.19

chr11:1997732:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2176:9786:25998

YES_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr10--chr11]""]"

chr10:133420091-chr11:1997732

False

Read

count

too

low:

FAIL

MTFP1--CCDC157

1.0

0.0

ONLY_REF_SPLICE

MTFP1^ENSG00000242114.6

chr22:30425946:+

CCDC157^ENSG00000187860.10

chr22:30373597:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1409:36054:18333

YES_LDAS

0.0034

1.8295

1.9656

"[""INTRACHROMOSOMAL[chr22:0.05Mb]"",""LOCAL_REARRANGEMENT:+:[46965]""]"

chr22:30425946-chr22:30373597

False

Read

count

too

low:

FAIL

MTA3--GON4L

1.0

0.0

ONLY_REF_SPLICE

MTA3^ENSG00000057935.14

chr2:42581908:+

GON4L^ENSG00000116580.19

chr1:155822476:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2263:7124:2752

NO_LDAS

0.0034

1.9329

1.5546

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:42581908-chr1:155822476

False

Read

count

too

low:

FAIL

MT1X--XPO7

0.5

0.0

INCL_NON_REF_SPLICE

MT1X^ENSG00000187193.9

chr16:56683230:+

XPO7^ENSG00000130227.17

chr8:22002130:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2464:37656:23826

NO_LDAS

0.0017

1.9086

1.5301

"[""INTERCHROMOSOMAL[chr16--chr8]""]"

chr16:56683230-chr8:22002130

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MT1IP--MT2A

1.0

0.0

ONLY_REF_SPLICE

MT1IP^ENSG00000275691.2

chr16:56676217:+

MT2A^ENSG00000125148.7

chr16:56608992:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1203:23652:4643

NO_LDAS

0.0034

1.7968

1.8892

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr16:0.07Mb]"",""LOCAL_REARRANGEMENT:+:[66635]""]"

chr16:56676217-chr16:56608992

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

MSI2--SHLD2

0.33

0.0

ONLY_REF_SPLICE

MSI2^ENSG00000153944.12

chr17:57262192:+

SHLD2^ENSG00000122376.12

chr10:87190484:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1214:10918:2177

NO_LDAS

0.0011

1.5656

1.9086

"[""INTERCHROMOSOMAL[chr17--chr10]""]"

chr17:57262192-chr10:87190484

False

Read

count

too

low:

FAIL

MSANTD2--CCDC15

1.0

0.0

ONLY_REF_SPLICE

MSANTD2^ENSG00000120458.13

chr11:124799871:-

CCDC15^ENSG00000149548.15

chr11:124986742:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1409:36984:18740

NO_LDAS

0.0034

1.8062

1.9329

"[""INTRACHROMOSOMAL[chr11:0.15Mb]""]"

chr11:124799871-chr11:124986742

False

Read

count

too

low:

FAIL

MRPS6--AP000317.1

1.0

0.0

ONLY_REF_SPLICE

MRPS6^ENSG00000243927.6

chr21:34073745:+

AP000317.1^ENSG00000214955.5

chr21:34262820:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2227:39897:1196

YES_LDAS

0.0034

1.8256

1.8892

"[""INTRACHROMOSOMAL[chr21:0.06Mb]"",""NEIGHBORS[62021]""]"

chr21:34073745-chr21:34262820

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

MRPS34--TPPP3

1.0

0.0

INCL_NON_REF_SPLICE

MRPS34^ENSG00000074071.15

chr16:1772730:-

TPPP3^ENSG00000159713.11

chr16:67393459:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1220:44492:9127

NO_LDAS

0.0034

1.5546

1.4566

"[""INTRACHROMOSOMAL[chr16:65.62Mb]""]"

chr16:1772730-chr16:67393459

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MRPS27--AC067817.2

1.0

0.0

INCL_NON_REF_SPLICE

MRPS27^ENSG00000113048.17

chr5:72220412:-

AC067817.2^ENSG00000253829.1

chr8:38846172:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1366:18628:8861

YES_LDAS

0.0034

1.6895

1.9656

"[""INTERCHROMOSOMAL[chr5--chr8]""]"

chr5:72220412-chr8:38846172

False

Read

count

too

low:

FAIL

MRPS18A--LLPH-DT

1.0

0.0

ONLY_REF_SPLICE

MRPS18A^ENSG00000096080.12

chr6:43687668:-

LLPH-DT^ENSG00000239335.4

chr12:66134052:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1195:33133:20141

YES_LDAS

0.0034

1.7232

1.7819

"[""INTERCHROMOSOMAL[chr6--chr12]""]"

chr6:43687668-chr12:66134052

False

Read

count

too

low:

FAIL

MRPS18A--AC074117.1

1.0

0.0

INCL_NON_REF_SPLICE

MRPS18A^ENSG00000096080.12

chr6:43687668:-

AC074117.1^ENSG00000234072.1

chr2:27358885:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1244:46514:23167

YES_LDAS

0.0034

1.7232

1.7819

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:43687668-chr2:27358885

True

pair|recurrent

breakpoints

Blacklisted

FAIL

MRPS17--MTMR11

1.0

0.0

INCL_NON_REF_SPLICE

MRPS17^ENSG00000239789.6

chr7:55953192:+

MTMR11^ENSG00000014914.21

chr1:149934321:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2348:10360:10654

NO_LDAS

0.0034

1.8256

1.9329

"[""INTERCHROMOSOMAL[chr7--chr1]""]"

chr7:55953192-chr1:149934321

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MRPL4--PKNOX2

0.5

0.0

INCL_NON_REF_SPLICE

MRPL4^ENSG00000105364.14

chr19:10259800:+

PKNOX2^ENSG00000165495.16

chr11:125429012:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1308:24582:28254

NO_LDAS

0.0017

1.2419

1.3753

"[""INTERCHROMOSOMAL[chr19--chr11]""]"

chr19:10259800-chr11:125429012

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MRPL27--CRB1

1.0

0.0

INCL_NON_REF_SPLICE

MRPL27^ENSG00000108826.16

chr17:50367904:-

CRB1^ENSG00000134376.17

chr1:197443108:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2381:22261:15517

YES_LDAS

0.0034

1.6402

1.8892

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:50367904-chr1:197443108

False

Read

count

too

low:

FAIL

MRPL2--RPS19BP1

1.0

0.0

INCL_NON_REF_SPLICE

MRPL2^ENSG00000112651.12

chr6:43058174:-

RPS19BP1^ENSG00000187051.9

chr22:39529772:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2232:3217:16666

NO_LDAS

0.0034

1.4256

1.8256

"[""INTERCHROMOSOMAL[chr6--chr22]""]"

chr6:43058174-chr22:39529772

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MRPL12--HBA1

0.33

0.0

INCL_NON_REF_SPLICE

MRPL12^ENSG00000262814.8

chr17:81707140:+

HBA1^ENSG00000206172.8

chr16:176789:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1111:19461:23392

NO_LDAS

0.0011

1.7056

1.8295

"[""INTERCHROMOSOMAL[chr17--chr16]""]"

chr17:81707140-chr16:176789

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MPP6--NRIP1

1.0

0.0

ONLY_REF_SPLICE

MPP6^ENSG00000105926.16

chr7:24680520:+

NRIP1^ENSG00000180530.11

chr21:15043574:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2242:23976:12602

YES_LDAS

0.0034

1.8892

1.5219

"[""INTERCHROMOSOMAL[chr7--chr21]""]"

chr7:24680520-chr21:15043574

False

Read

count

too

low:

FAIL

MPND--WWP2

1.0

0.0

ONLY_REF_SPLICE

MPND^ENSG00000008382.16

chr19:4358172:+

WWP2^ENSG00000198373.13

chr16:69888039:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1109:18361:26923

YES_LDAS

0.0034

1.9899

1.9219

"[""INTERCHROMOSOMAL[chr19--chr16]""]"

chr19:4358172-chr16:69888039

False

Read

count

too

low:

FAIL

MON1B--SYCE1L

1.0

0.0

ONLY_REF_SPLICE

MON1B^ENSG00000103111.15

chr16:77195682:+

SYCE1L^ENSG00000205078.6

chr16:77206441:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1286:24356:16035

NO_LDAS

0.0034

1.9656

1.9899

"[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[2990]""]"

chr16:77195682-chr16:77206441

True

pair|recurrent

breakpoints

Blacklisted

FAIL

MOB3A--GNG7

1.0

0.0

ONLY_REF_SPLICE

MOB3A^ENSG00000172081.14

chr19:2096226:-

GNG7^ENSG00000176533.13

chr19:2646280:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1247:1947:23714

YES_LDAS

0.0034

1.7465

1.6402

"[""INTRACHROMOSOMAL[chr19:0.41Mb]""]"

chr19:2096226-chr19:2646280

False

Read

count

too

low:

FAIL

MMADHC-DT--INPP4A

1.0

0.0

ONLY_REF_SPLICE

MMADHC-DT^ENSG00000231969.2

chr2:149587873:+

INPP4A^ENSG00000040933.16

chr2:98518964:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2441:8467:23546

NO_LDAS

0.0034

0.9968

1.8256

"[""INTRACHROMOSOMAL[chr2:50.99Mb]""]"

chr2:149587873-chr2:98518964

False

Read

count

too

low:

FAIL

MLYCD--ITGA5

0.5

0.0

INCL_NON_REF_SPLICE

MLYCD^ENSG00000103150.7

chr16:83913824:+

ITGA5^ENSG00000161638.11

chr12:54409526:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2468:20076:16470

NO_LDAS

0.0017

0.3534

1.9219

"[""INTERCHROMOSOMAL[chr16--chr12]""]"

chr16:83913824-chr12:54409526

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MLLT10--PATJ

1.0

0.0

ONLY_REF_SPLICE

MLLT10^ENSG00000078403.17

chr10:21551921:+

PATJ^ENSG00000132849.21

chr1:61875243:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1230:29048:24302

YES_LDAS

0.0034

1.7232

1.3996

"[""INTERCHROMOSOMAL[chr10--chr1]""]"

chr10:21551921-chr1:61875243

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

MISP3--OTOA

0.5

0.0

INCL_NON_REF_SPLICE

MISP3^ENSG00000141854.9

chr19:14073913:+

OTOA^ENSG00000155719.18

chr16:21740861:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1229:38610:4937

NO_LDAS

0.0017

1.4295

1.8256

"[""INTERCHROMOSOMAL[chr19--chr16]""]"

chr19:14073913-chr16:21740861

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MIR4290HG--MAST4

0.5

0.0

INCL_NON_REF_SPLICE

MIR4290HG^ENSG00000227555.1

chr9:90025151:-

MAST4^ENSG00000069020.18

chr5:67165825:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2113:14802:28884

NO_LDAS

0.0017

1.6402

1.9086

"[""INTERCHROMOSOMAL[chr9--chr5]""]"

chr9:90025151-chr5:67165825

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MIR29B2CHG--CKS1BP2

0.5

0.0

INCL_NON_REF_SPLICE

MIR29B2CHG^ENSG00000203709.12

chr1:207815708:-

CKS1BP2^ENSG00000225976.5

chr10:29698020:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2190:21686:2051

YES_LDAS

0.0017

1.7968

1.9219

"[""INTERCHROMOSOMAL[chr1--chr10]""]"

chr1:207815708-chr10:29698020

False

Read

count

too

low:

FAIL

MIR194-2HG--POLR1A

1.0

0.0

INCL_NON_REF_SPLICE

MIR194-2HG^ENSG00000229719.5

chr11:64893054:-

POLR1A^ENSG00000068654.16

chr2:86025336:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2104:23215:16694

NO_LDAS

0.0034

1.7819

1.8323

"[""INTERCHROMOSOMAL[chr11--chr2]""]"

chr11:64893054-chr2:86025336

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MIPEP--CRYL1

1.0

0.0

ONLY_REF_SPLICE

MIPEP^ENSG00000027001.10

chr13:23836240:-

CRYL1^ENSG00000165475.15

chr13:20439754:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1198:14535:29459

YES_LDAS

0.0034

1.9656

1.9329

"[""INTRACHROMOSOMAL[chr13:3.20Mb]""]"

chr13:23836240-chr13:20439754

False

Read

count

too

low:

FAIL

MIA2--DGLUCY

1.0

0.0

ONLY_REF_SPLICE

MIA2^ENSG00000150527.17

chr14:39318011:+

DGLUCY^ENSG00000133943.21

chr14:91188910:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2393:42259:26811

YES_LDAS

0.0034

1.4716

1.7232

"[""INTRACHROMOSOMAL[chr14:51.67Mb]""]"

chr14:39318011-chr14:91188910

False

Read

count

too

low:

FAIL

MGST1--AC007529.2

1.0

0.0

ONLY_REF_SPLICE

MGST1^ENSG00000008394.13

chr12:16383604:+

AC007529.2^ENSG00000283240.1

chr12:16661766:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2197:9656:3074

YES_LDAS

0.0034

1.9329

1.6895

"[""BodyMap"",""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr12:0.05Mb]"",""NEIGHBORS[52507]""]"

chr12:16383604-chr12:16661766

True

pair|recurrent

breakpoints

Blacklisted

FAIL

MGAT5--SPOPL

1.0

0.0

ONLY_REF_SPLICE

MGAT5^ENSG00000152127.9

chr2:134362408:+

SPOPL^ENSG00000144228.9

chr2:138550157:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1356:49621:20029

YES_LDAS

0.0034

1.9329

1.9656

"[""INTRACHROMOSOMAL[chr2:4.05Mb]""]"

chr2:134362408-chr2:138550157

False

Read

count

too

low:

FAIL

MFSD6--EPHA4

1.0

0.0

ONLY_REF_SPLICE

MFSD6^ENSG00000151690.15

chr2:190500276:+

EPHA4^ENSG00000116106.12

chr2:221501172:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2351:27802:24555

NO_LDAS

0.0034

1.585

1.9086

"[""INTRACHROMOSOMAL[chr2:30.91Mb]""]"

chr2:190500276-chr2:221501172

False

Read

count

too

low:

FAIL

MFSD14A--SOCS6

1.0

0.0

ONLY_REF_SPLICE

MFSD14A^ENSG00000156875.14

chr1:100038316:+

SOCS6^ENSG00000170677.6

chr18:70324543:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2384:27543:21836

YES_LDAS

0.0034

1.5058

1.8295

"[""INTERCHROMOSOMAL[chr1--chr18]""]"

chr1:100038316-chr18:70324543

False

Read

count

too

low:

FAIL

MFHAS1--SLC4A7

1.0

0.0

ONLY_REF_SPLICE

MFHAS1^ENSG00000147324.11

chr8:8890061:-

SLC4A7^ENSG00000033867.16

chr3:27452498:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1110:38902:26909

YES_LDAS

0.0034

1.9086

"[""INTERCHROMOSOMAL[chr8--chr3]""]"

chr8:8890061-chr3:27452498

False

Read

count

too

low:

FAIL

MFGE8--ZNF468

1.0

0.0

ONLY_REF_SPLICE

MFGE8^ENSG00000140545.15

chr15:88913247:-

ZNF468^ENSG00000204604.13

chr19:52842151:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1385:21476:20267

NO_LDAS

0.0034

1.5301

1.5656

"[""INTERCHROMOSOMAL[chr15--chr19]""]"

chr15:88913247-chr19:52842151

False

Read

count

too

low:

FAIL

MEMO1--AL731563.3

1.0

0.0

INCL_NON_REF_SPLICE

MEMO1^ENSG00000162959.14

chr2:32011119:-

AL731563.3^ENSG00000272630.1

chr10:73098886:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1189:30529:1448

NO_LDAS

0.0034

1.9656

0.0

"[""INTERCHROMOSOMAL[chr2--chr10]""]"

chr2:32011119-chr10:73098886

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MEF2C--MEF2C-AS1

1.0

0.0

ONLY_REF_SPLICE

MEF2C^ENSG00000081189.16

chr5:88749070:-

MEF2C-AS1^ENSG00000248309.7

chr5:88943016:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1343:42987:19412

YES_LDAS

0.0034

1.8256

1.9656

"[""INTRACHROMOSOMAL[chr5:0.02Mb]"",""NEIGHBORS_OVERLAP:-:+:[20929]""]"

chr5:88749070-chr5:88943016

False

Read

count

too

low:

FAIL

MED9--RAP1GAP2

1.0

0.0

ONLY_REF_SPLICE

MED9^ENSG00000141026.6

chr17:17477265:+

RAP1GAP2^ENSG00000132359.15

chr17:3020477:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1487:10295:17969

YES_LDAS

0.0034

1.7465

1.7819

"[""INTRACHROMOSOMAL[chr17:14.44Mb]""]"

chr17:17477265-chr17:3020477

False

Read

count

too

low:

FAIL

MED24--NAP1L4

1.0

0.0

ONLY_REF_SPLICE

MED24^ENSG00000008838.20

chr17:40053298:-

NAP1L4^ENSG00000205531.13

chr11:2945646:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1107:34921:23406

YES_LDAS

0.0034

1.9656

1.5656

"[""INTERCHROMOSOMAL[chr17--chr11]""]"

chr17:40053298-chr11:2945646

False

Read

count

too

low:

FAIL

MED19--SOS2

1.0

0.0

INCL_NON_REF_SPLICE

MED19^ENSG00000156603.19

chr11:57704524:-

SOS2^ENSG00000100485.12

chr14:50158590:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2342:44379:29249

YES_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr11--chr14]""]"

chr11:57704524-chr14:50158590

False

Read

count

too

low:

FAIL

MED1--TOM1L1

1.0

0.0

ONLY_REF_SPLICE

MED1^ENSG00000125686.12

chr17:39419717:-

TOM1L1^ENSG00000141198.16

chr17:54938924:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2329:39492:26783

YES_LDAS

0.0034

1.8892

1.8256

"[""INTRACHROMOSOMAL[chr17:15.45Mb]""]"

chr17:39419717-chr17:54938924

False

Read

count

too

low:

FAIL

ME1--CDK19

1.0

0.0

INCL_NON_REF_SPLICE

ME1^ENSG00000065833.9

chr6:83211957:-

CDK19^ENSG00000155111.15

chr6:110670541:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1131:34994:2037

YES_LDAS

0.0034

1.9656

1.8892

"[""INTRACHROMOSOMAL[chr6:27.18Mb]""]"

chr6:83211957-chr6:110670541

False

Read

count

too

low:

FAIL

MCUB--SEC24B

1.0

0.0

ONLY_REF_SPLICE

MCUB^ENSG00000005059.16

chr4:109560436:+

SEC24B^ENSG00000138802.11

chr4:109473004:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1174:9090:16442

YES_LDAS

0.0034

1.3753

1.7232

"[""INTRACHROMOSOMAL[chr4:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[19313]""]"

chr4:109560436-chr4:109473004

False

Read

count

too

low:

FAIL

MCU--YTHDF3

1.0

0.0

INCL_NON_REF_SPLICE

MCU^ENSG00000156026.14

chr10:72692351:+

YTHDF3^ENSG00000185728.17

chr8:63187009:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2439:7132:22383

YES_LDAS

0.0034

1.3383

1.8062

"[""INTERCHROMOSOMAL[chr10--chr8]""]"

chr10:72692351-chr8:63187009

False

Read

count

too

low:

FAIL

MCMBP--ISL2

1.0

0.0

INCL_NON_REF_SPLICE

MCMBP^ENSG00000197771.13

chr10:119847698:-

ISL2^ENSG00000159556.10

chr15:76338430:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1275:36353:23644

NO_LDAS

0.0034

1.5656

1.6729

"[""INTERCHROMOSOMAL[chr10--chr15]""]"

chr10:119847698-chr15:76338430

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MCM3--SPATA31E2P

0.5

0.0

INCL_NON_REF_SPLICE

MCM3^ENSG00000112118.20

chr6:52269086:-

SPATA31E2P^ENSG00000258916.2

chr15:20595594:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2147:39411:21458

NO_LDAS

0.0017

1.9086

"[""INTERCHROMOSOMAL[chr6--chr15]""]"

chr6:52269086-chr15:20595594

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MCC--POMC

1.0

0.0

INCL_NON_REF_SPLICE

MCC^ENSG00000171444.18

chr5:113068080:-

POMC^ENSG00000115138.11

chr2:25168715:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1471:25586:8104

NO_LDAS

0.0034

1.5656

1.0389

"[""INTERCHROMOSOMAL[chr5--chr2]""]"

chr5:113068080-chr2:25168715

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MBP--ZBTB1

1.0

0.0

ONLY_REF_SPLICE

MBP^ENSG00000197971.16

chr18:77132580:-

ZBTB1^ENSG00000126804.13

chr14:64521487:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1235:12108:7712

YES_LDAS

0.0034

1.5219

1.9086

"[""INTERCHROMOSOMAL[chr18--chr14]""]"

chr18:77132580-chr14:64521487

False

Read

count

too

low:

FAIL

MBOAT2--NBAS

1.0

0.0

ONLY_REF_SPLICE

MBOAT2^ENSG00000143797.12

chr2:9003540:-

NBAS^ENSG00000151779.13

chr2:15402301:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1194:6890:11649

YES_LDAS

0.0034

1.8295

"[""INTRACHROMOSOMAL[chr2:6.16Mb]""]"

chr2:9003540-chr2:15402301

False

Read

count

too

low:

FAIL

MAX--LINC00678

1.0

0.0

INCL_NON_REF_SPLICE

MAX^ENSG00000125952.20

chr14:65102300:-

LINC00678^ENSG00000254934.5

chr11:27623989:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1280:44807:2920

NO_LDAS

0.0034

1.7968

1.7465

"[""INTERCHROMOSOMAL[chr14--chr11]""]"

chr14:65102300-chr11:27623989

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

MAU2--RASGRP4

1.0

0.0

ONLY_REF_SPLICE

MAU2^ENSG00000129933.21

chr19:19343940:+

RASGRP4^ENSG00000171777.16

chr19:38415123:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1150:6299:12784

YES_LDAS

0.0034

1.7465

"[""INTRACHROMOSOMAL[chr19:19.05Mb]""]"

chr19:19343940-chr19:38415123

False

Read

count

too

low:

FAIL

MATR3--ITPK1P1

0.5

0.0

INCL_NON_REF_SPLICE

MATR3^ENSG00000015479.20

chr5:139322967:+

ITPK1P1^ENSG00000237351.1

chrX:47157152:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1169:25173:23476

NO_LDAS

0.0017

1.4256

1.8892

"[""INTERCHROMOSOMAL[chr5--chrX]""]"

chr5:139322967-chrX:47157152

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MATK--CICP18

1.0

0.0

INCL_NON_REF_SPLICE

MATK^ENSG00000007264.15

chr19:3784846:-

CICP18^ENSG00000217929.4

chr6:144409:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2497:9098:4853

YES_LDAS

0.0034

1.4256

1.8295

"[""INTERCHROMOSOMAL[chr19--chr6]""]"

chr19:3784846-chr6:144409

False

Read

count

too

low:

FAIL

MARCHF5--DCUN1D1

1.0

0.0

ONLY_REF_SPLICE

MARCHF5^ENSG00000198060.10

chr10:92291529:+

DCUN1D1^ENSG00000043093.15

chr3:182965753:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2158:51546:28324

NO_LDAS

0.0034

1.8892

1.7232

"[""INTERCHROMOSOMAL[chr10--chr3]""]"

chr10:92291529-chr3:182965753

False

Read

count

too

low:

FAIL

MAPKAPK3--PPARD

1.0

0.0

INCL_NON_REF_SPLICE

MAPKAPK3^ENSG00000114738.11

chr3:50642332:+

PPARD^ENSG00000112033.14

chr6:35411110:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2218:5320:26671

NO_LDAS

0.0034

1.9329

1.7056

"[""INTERCHROMOSOMAL[chr3--chr6]""]"

chr3:50642332-chr6:35411110

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MAPK14--MAPK12

1.0

0.0

ONLY_REF_SPLICE

MAPK14^ENSG00000112062.11

chr6:36074096:+

MAPK12^ENSG00000188130.14

chr22:50256199:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2346:25618:16680

NO_LDAS

0.0034

1.8892

1.9329

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr6--chr22]""]"

chr6:36074096-chr22:50256199

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

MAPK10--SPARCL1

1.0

0.0

ONLY_REF_SPLICE

MAPK10^ENSG00000109339.24

chr4:86453030:-

SPARCL1^ENSG00000152583.13

chr4:87499585:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2250:27187:3873

YES_LDAS

0.0034

1.9656

1.8892

"[""INTRACHROMOSOMAL[chr4:0.88Mb]""]"

chr4:86453030-chr4:87499585

False

Read

count

too

low:

FAIL

MAP2K1--PVT1

1.0

0.0

ONLY_REF_SPLICE

MAP2K1^ENSG00000169032.10

chr15:66387427:+

PVT1^ENSG00000249859.12

chr8:127890589:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1344:47663:15040

YES_LDAS

0.0034

1.9086

1.8062

"[""INTERCHROMOSOMAL[chr15--chr8]""]"

chr15:66387427-chr8:127890589

False

Read

count

too

low:

FAIL

MAP1LC3A--HLA-K

1.0

0.0

INCL_NON_REF_SPLICE

MAP1LC3A^ENSG00000101460.13

chr20:34550029:+

HLA-K^ENSG00000230795.3

chr6:29926797:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2247:20238:3774

NO_LDAS

0.0034

1.9086

1.7056

"[""INTERCHROMOSOMAL[chr20--chr6]""]"

chr20:34550029-chr6:29926797

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

MAML1--ITSN1

1.0

0.0

ONLY_REF_SPLICE

MAML1^ENSG00000161021.13

chr5:179771243:+

ITSN1^ENSG00000205726.15

chr21:33856736:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2442:16339:11817

YES_LDAS

0.0034

1.9899

1.9656

"[""INTERCHROMOSOMAL[chr5--chr21]""]"

chr5:179771243-chr21:33856736

False

Read

count

too

low:

FAIL

MALSU1--MAGI3

1.0

0.0

ONLY_REF_SPLICE

MALSU1^ENSG00000156928.5

chr7:23301017:+

MAGI3^ENSG00000081026.19

chr1:113651014:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1209:40156:9688

NO_LDAS

0.0034

1.8256

1.8062

"[""INTERCHROMOSOMAL[chr7--chr1]""]"

chr7:23301017-chr1:113651014

False

Read

count

too

low:

FAIL

MAGI3--TRAF2

1.0

0.0

ONLY_REF_SPLICE

MAGI3^ENSG00000081026.19

chr1:113391349:+

TRAF2^ENSG00000127191.18

chr9:136898713:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1274:17447:21416

YES_LDAS

0.0034

1.8892

1.5058

"[""INTERCHROMOSOMAL[chr1--chr9]""]"

chr1:113391349-chr9:136898713

False

Read

count

too

low:

FAIL

MACROD2--KIF16B

1.0

0.0

ONLY_REF_SPLICE

MACROD2^ENSG00000172264.17

chr20:14684959:+

KIF16B^ENSG00000089177.19

chr20:16528440:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1157:2068:4419

NO_LDAS

0.0034

1.8256

1.7056

"[""ChimerSeq"",""INTRACHROMOSOMAL[chr20:0.22Mb]""]"

chr20:14684959-chr20:16528440

False

Read

count

too

low:

FAIL

MACC1--SNX13

1.0

0.0

ONLY_REF_SPLICE

MACC1^ENSG00000183742.13

chr7:20217299:-

SNX13^ENSG00000071189.21

chr7:17875790:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1194:16096:22579

YES_LDAS

0.0034

1.5656

1.5546

"[""INTRACHROMOSOMAL[chr7:2.19Mb]""]"

chr7:20217299-chr7:17875790

False

Read

count

too

low:

FAIL

MACC1--CSNK2A2

1.0

0.0

INCL_NON_REF_SPLICE

MACC1^ENSG00000183742.13

chr7:20140815:-

CSNK2A2^ENSG00000070770.10

chr16:58161588:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2323:37712:25101

YES_LDAS

0.0034

1.2729

"[""INTERCHROMOSOMAL[chr7--chr16]""]"

chr7:20140815-chr16:58161588

False

Read

count

too

low:

FAIL

LZTR1--LRRCC1

1.0

0.0

INCL_NON_REF_SPLICE

LZTR1^ENSG00000099949.21

chr22:20988872:+

LRRCC1^ENSG00000133739.16

chr8:85107574:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1190:1316:1911

NO_LDAS

0.0034

1.8256

1.8892

"[""INTERCHROMOSOMAL[chr22--chr8]""]"

chr22:20988872-chr8:85107574

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LYPLA1--HSPA1B

1.0

0.0

INCL_NON_REF_SPLICE

LYPLA1^ENSG00000120992.18

chr8:54048024:-

HSPA1B^ENSG00000204388.7

chr6:31827817:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2141:9939:25564

YES_LDAS

0.0034

1.8256

1.8892

"[""INTERCHROMOSOMAL[chr8--chr6]""]"

chr8:54048024-chr6:31827817

False

Read

count

too

low:

FAIL

LYN--AC008011.2

1.0

0.0

INCL_NON_REF_SPLICE

LYN^ENSG00000254087.8

chr8:55880103:+

AC008011.2^ENSG00000257042.1

chr12:27958519:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2226:3840:20547

YES_LDAS

0.0034

1.9086

"[""INTERCHROMOSOMAL[chr8--chr12]""]"

chr8:55880103-chr12:27958519

False

Read

count

too

low:

FAIL

LUM--SMCR8

0.5

0.0

INCL_NON_REF_SPLICE

LUM^ENSG00000139329.5

chr12:91108802:-

SMCR8^ENSG00000176994.11

chr17:18317397:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1356:6825:10753

NO_LDAS

0.0017

1.6729

1.8892

"[""INTERCHROMOSOMAL[chr12--chr17]""]"

chr12:91108802-chr17:18317397

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LUCAT1--PIGL

1.0

0.0

ONLY_REF_SPLICE

LUCAT1^ENSG00000248323.7

chr5:91313638:-

PIGL^ENSG00000108474.17

chr17:16299888:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1336:7957:26138

NO_LDAS

0.0034

1.3383

1.9899

"[""INTERCHROMOSOMAL[chr5--chr17]""]"

chr5:91313638-chr17:16299888

True

pair|recurrent

breakpoints

Blacklisted

FAIL

LUC7L2--TAX1BP3

1.0

0.0

INCL_NON_REF_SPLICE

LUC7L2^ENSG00000146963.18

chr7:139407313:+

TAX1BP3^ENSG00000213977.8

chr17:3663737:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2157:2343:13807

YES_LDAS

0.0034

1.9899

1.8892

"[""INTERCHROMOSOMAL[chr7--chr17]""]"

chr7:139407313-chr17:3663737

False

Read

count

too

low:

FAIL

LRRC10B--CRTAC1

1.0

0.0

INCL_NON_REF_SPLICE

LRRC10B^ENSG00000204950.4

chr11:61509643:+

CRTAC1^ENSG00000095713.14

chr10:97865700:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2357:32753:24302

NO_LDAS

0.0034

1.5329

1.4716

"[""INTERCHROMOSOMAL[chr11--chr10]""]"

chr11:61509643-chr10:97865700

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LRPAP1--LRRC37A16P

0.25

0.0

INCL_NON_REF_SPLICE

LRPAP1^ENSG00000163956.13

chr4:3514752:-

LRRC37A16P^ENSG00000267023.5

chr17:68128281:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2275:16970:1168

NO_LDAS

0.0009

1.8892

1.9086

"[""INTERCHROMOSOMAL[chr4--chr17]""]"

chr4:3514752-chr17:68128281

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LRP8--ADAMTSL3

1.0

0.0

INCL_NON_REF_SPLICE

LRP8^ENSG00000157193.18

chr1:53246294:-

ADAMTSL3^ENSG00000156218.13

chr15:83923904:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2404:1146:15909

NO_LDAS

0.0034

1.9329

1.7819

"[""INTERCHROMOSOMAL[chr1--chr15]""]"

chr1:53246294-chr15:83923904

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LRP4--PHF21A

1.0

0.0

ONLY_REF_SPLICE

LRP4^ENSG00000134569.10

chr11:46918328:-

PHF21A^ENSG00000135365.16

chr11:46084302:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1236:39136:23644

NO_LDAS

0.0034

1.8892

1.8323

"[""INTRACHROMOSOMAL[chr11:0.74Mb]""]"

chr11:46918328-chr11:46084302

False

Read

count

too

low:

FAIL

LPL--AC013356.1

0.12

0.0

INCL_NON_REF_SPLICE

LPL^ENSG00000175445.17

chr8:19939528:+

AC013356.1^ENSG00000244251.1

chr15:40480922:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1253:48885:1771

YES_LDAS

0.0004

1.5329

1.6895

"[""INTERCHROMOSOMAL[chr8--chr15]""]"

chr8:19939528-chr15:40480922

False

Read

count

too

low:

FAIL

LPCAT3--RPLP0P2

0.5

0.0

INCL_NON_REF_SPLICE

LPCAT3^ENSG00000111684.11

chr12:6976264:-

RPLP0P2^ENSG00000243742.5

chr11:61637614:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2223:33635:29473

NO_LDAS

0.0017

0.9056

1.5058

"[""INTERCHROMOSOMAL[chr12--chr11]""]"

chr12:6976264-chr11:61637614

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LOXL3--FBXO44

1.0

0.0

INCL_NON_REF_SPLICE

LOXL3^ENSG00000115318.12

chr2:74532995:-

FBXO44^ENSG00000132879.14

chr1:11661714:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1342:30601:25732

YES_LDAS

0.0034

1.9086

1.9899

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:74532995-chr1:11661714

False

Read

count

too

low:

FAIL

LMBR1--DYNC2I1

1.0

0.0

ONLY_REF_SPLICE

LMBR1^ENSG00000105983.22

chr7:156892928:-

DYNC2I1^ENSG00000126870.16

chr7:158879684:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1365:7788:13989

YES_LDAS

0.0034

1.7968

1.9329

"[""INTRACHROMOSOMAL[chr7:1.96Mb]""]"

chr7:156892928-chr7:158879684

False

Read

count

too

low:

FAIL

LINC02848--ZNF282

1.0

0.0

INCL_NON_REF_SPLICE

LINC02848^ENSG00000226581.2

chr7:63900891:+

ZNF282^ENSG00000170265.12

chr7:149223835:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2327:25893:29403

NO_LDAS

0.0034

1.5546

1.2419

"[""INTRACHROMOSOMAL[chr7:85.27Mb]""]"

chr7:63900891-chr7:149223835

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LINC02802--AC245060.4

0.33

0.0

ONLY_REF_SPLICE

LINC02802^ENSG00000232527.8

chr1:144250225:-

AC245060.4^ENSG00000272779.1

chr22:22303224:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2154:47930:29655

YES_LDAS

0.0011

1.9329

1.9219

"[""INTERCHROMOSOMAL[chr1--chr22]""]"

chr1:144250225-chr22:22303224

False

Read

count

too

low:

FAIL

LINC02728--GAB2

1.0

0.0

ONLY_REF_SPLICE

LINC02728^ENSG00000251323.3

chr11:78425337:-

GAB2^ENSG00000033327.13

chr11:78280901:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1261:8330:21570

YES_LDAS

0.0034

1.8892

1.8256

"[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[5634]""]"

chr11:78425337-chr11:78280901

True

pair|recurrent

breakpoints

Blacklisted

FAIL

LINC02093--MOSPD1

1.0

0.0

ONLY_REF_SPLICE

LINC02093^ENSG00000234634.2

chr17:13301119:-

MOSPD1^ENSG00000101928.13

chrX:134891640:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1447:48399:2303

NO_LDAS

0.0034

1.9656

1.8295

"[""INTERCHROMOSOMAL[chr17--chrX]""]"

chr17:13301119-chrX:134891640

False

Read

count

too

low:

FAIL

LINC02092--ZFAND6

1.0

0.0

INCL_NON_REF_SPLICE

LINC02092^ENSG00000234721.3

chr17:73786698:+

ZFAND6^ENSG00000086666.19

chr15:80120328:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1460:1032:12350

YES_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr17--chr15]""]"

chr17:73786698-chr15:80120328

False

Read

count

too

low:

FAIL

LINC02080--ZDHHC24

1.0

0.0

ONLY_REF_SPLICE

LINC02080^ENSG00000267065.2

chr17:76799544:+

ZDHHC24^ENSG00000174165.8

chr11:66521466:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1376:35811:4825

NO_LDAS

0.0034

1.9329

1.7465

"[""INTERCHROMOSOMAL[chr17--chr11]""]"

chr17:76799544-chr11:66521466

False

Read

count

too

low:

FAIL

LINC01705--LINC02257

1.0

0.0

ONLY_REF_SPLICE

LINC01705^ENSG00000232679.2

chr1:222058414:-

LINC02257^ENSG00000238042.5

chr1:221914531:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1312:44233:4447

YES_LDAS

0.0034

1.7056

1.6729

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.03Mb]"",""NEIGHBORS[32302]""]"

chr1:222058414-chr1:221914531

True

pair|recurrent

breakpoints

Blacklisted

FAIL

LINC01500--GPALPP1

1.0

0.0

INCL_NON_REF_SPLICE

LINC01500^ENSG00000258583.7

chr14:58828548:+

GPALPP1^ENSG00000133114.18

chr13:44989665:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1121:16598:3718

NO_LDAS

0.0034

1.8256

1.9086

"[""INTERCHROMOSOMAL[chr14--chr13]""]"

chr14:58828548-chr13:44989665

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LINC01184--AC019185.2

1.0

0.0

INCL_NON_REF_SPLICE

LINC01184^ENSG00000245937.8

chr5:127939108:-

AC019185.2^ENSG00000232409.1

chr2:208517213:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2492:47356:3382

NO_LDAS

0.0034

0.6998

1.5219

"[""INTERCHROMOSOMAL[chr5--chr2]""]"

chr5:127939108-chr2:208517213

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LINC01170--AL136418.1

1.0

0.0

ONLY_REF_SPLICE

LINC01170^ENSG00000253807.6

chr5:124306176:-

AL136418.1^ENSG00000257831.1

chr14:31272894:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1466:43497:11243

NO_LDAS

0.0034

1.7232

1.8892

"[""INTERCHROMOSOMAL[chr5--chr14]""]"

chr5:124306176-chr14:31272894

False

Read

count

too

low:

FAIL

LINC01095--EIF3L

1.0

0.0

INCL_NON_REF_SPLICE

LINC01095^ENSG00000248809.6

chr4:146102576:-

EIF3L^ENSG00000100129.18

chr22:37871196:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2242:10805:19244

YES_LDAS

0.0034

1.8892

"[""INTERCHROMOSOMAL[chr4--chr22]""]"

chr4:146102576-chr22:37871196

False

Read

count

too

low:

FAIL

LINC00639--SKP1

0.5

0.0

INCL_NON_REF_SPLICE

LINC00639^ENSG00000259070.7

chr14:38748844:-

SKP1^ENSG00000113558.19

chr5:134167243:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1138:45738:4727

YES_LDAS

0.0017

1.9899

1.5656

"[""INTERCHROMOSOMAL[chr14--chr5]""]"

chr14:38748844-chr5:134167243

False

Read

count

too

low:

FAIL

LINC00592--ANKRD13C

1.0

0.0

ONLY_REF_SPLICE

LINC00592^ENSG00000258279.4

chr12:52222943:+

ANKRD13C^ENSG00000118454.13

chr1:70324957:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1421:43578:2864

NO_LDAS

0.0034

1.9329

"[""INTERCHROMOSOMAL[chr12--chr1]""]"

chr12:52222943-chr1:70324957

False

Read

count

too

low:

FAIL

LINC00524--EFCAB5

1.0

0.0

INCL_NON_REF_SPLICE

LINC00524^ENSG00000259023.3

chr14:101408175:-

EFCAB5^ENSG00000176927.15

chr17:29929957:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1148:37753:24891

NO_LDAS

0.0034

1.3753

1.4716

"[""INTERCHROMOSOMAL[chr14--chr17]""]"

chr14:101408175-chr17:29929957

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LINC00278--NPIPB12

0.2

0.0

INCL_NON_REF_SPLICE

LINC00278^ENSG00000231535.7

chrY:3002997:+

NPIPB12^ENSG00000169203.16

chr16:29495607:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1365:30779:14073

YES_LDAS

0.0007

1.9086

1.8892

"[""INTERCHROMOSOMAL[chrY--chr16]""]"

chrY:3002997-chr16:29495607

False

Read

count

too

low:

FAIL

LINC-PINT--AC016831.1

1.0

0.0

ONLY_REF_SPLICE

LINC-PINT^ENSG00000231721.7

chr7:130945720:-

AC016831.1^ENSG00000226380.9

chr7:130912152:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2268:28951:23406

YES_LDAS

0.0034

1.9656

"[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""NEIGHBORS[25653]""]"

chr7:130945720-chr7:130912152

True

pair|recurrent

breakpoints

Blacklisted

FAIL

LIMS1--UXS1

1.0

0.0

ONLY_REF_SPLICE

LIMS1^ENSG00000169756.16

chr2:108534594:+

UXS1^ENSG00000115652.15

chr2:106125679:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2263:50745:4013

YES_LDAS

0.0034

1.8256

1.7819

"[""INTRACHROMOSOMAL[chr2:2.34Mb]""]"

chr2:108534594-chr2:106125679

False

Read

count

too

low:

FAIL

LIME1--AC020909.2

1.0

0.0

INCL_NON_REF_SPLICE

LIME1^ENSG00000203896.10

chr20:63737647:+

AC020909.2^ENSG00000268518.1

chr19:50487459:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1460:24437:20631

NO_LDAS

0.0034

1.7465

1.5301

"[""INTERCHROMOSOMAL[chr20--chr19]""]"

chr20:63737647-chr19:50487459

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LILRB1--LILRA5

1.0

0.0

ONLY_REF_SPLICE

LILRB1^ENSG00000104972.15

chr19:54630633:+

LILRA5^ENSG00000187116.14

chr19:54312370:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1290:26136:20211

YES_LDAS

0.0034

1.8892

1.7465

"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.30Mb]""]"

chr19:54630633-chr19:54312370

True

pair|recurrent

breakpoints

Blacklisted

FAIL

LILRB1--AC245884.12

0.5

0.0

ONLY_REF_SPLICE

LILRB1^ENSG00000104972.15

chr19:54633318:+

AC245884.12^ENSG00000276758.1

chr19:54296252:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1265:10506:15503

YES_LDAS

0.0017

1.9329

1.8256

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr19:0.32Mb]""]"

chr19:54633318-chr19:54296252

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

LHX9--IQCJ-SCHIP1

1.0

0.0

INCL_NON_REF_SPLICE

LHX9^ENSG00000143355.16

chr1:197918595:+

IQCJ-SCHIP1^ENSG00000283154.2

chr3:159764772:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2393:32001:3999

NO_LDAS

0.0034

1.7819

0.8366

"[""INTERCHROMOSOMAL[chr1--chr3]""]"

chr1:197918595-chr3:159764772

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LHPP--ZNF131

1.0

0.0

INCL_NON_REF_SPLICE

LHPP^ENSG00000107902.14

chr10:124461901:+

ZNF131^ENSG00000172262.11

chr5:43121604:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2408:37146:1308

NO_LDAS

0.0034

1.3383

0.9056

"[""INTERCHROMOSOMAL[chr10--chr5]""]"

chr10:124461901-chr5:43121604

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LEMD3--GNS

1.0

0.0

ONLY_REF_SPLICE

LEMD3^ENSG00000174106.3

chr12:65218619:+

GNS^ENSG00000135677.11

chr12:64723113:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2418:17398:6647

YES_LDAS

0.0034

1.9086

"[""INTRACHROMOSOMAL[chr12:0.41Mb]""]"

chr12:65218619-chr12:64723113

False

Read

count

too

low:

FAIL

LDLR--RN7SL617P

0.14

0.0

INCL_NON_REF_SPLICE

LDLR^ENSG00000130164.14

chr19:11129538:+

RN7SL617P^ENSG00000241162.3

chr6:110440150:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1488:45980:5876

YES_LDAS

0.0005

1.5656

1.9329

"[""INTERCHROMOSOMAL[chr19--chr6]""]"

chr19:11129538-chr6:110440150

False

Read

count

too

low:

FAIL

LDLR--RN7SL277P

0.14

0.0

INCL_NON_REF_SPLICE

LDLR^ENSG00000130164.14

chr19:11129538:+

RN7SL277P^ENSG00000240490.3

chr1:19424537:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1488:45980:5876

YES_LDAS

0.0005

1.5656

1.9329

"[""INTERCHROMOSOMAL[chr19--chr1]""]"

chr19:11129538-chr1:19424537

False

Read

count

too

low:

FAIL

LDHA--AC092834.1

1.0

0.0

INCL_NON_REF_SPLICE

LDHA^ENSG00000134333.14

chr11:18402958:+

AC092834.1^ENSG00000249453.1

chr4:23782554:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1491:40414:14003

NO_LDAS

0.0034

1.4716

1.8062

"[""INTERCHROMOSOMAL[chr11--chr4]""]"

chr11:18402958-chr4:23782554

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

LBR--KIFBP

1.0

0.0

ONLY_REF_SPLICE

LBR^ENSG00000143815.15

chr1:225417984:-

KIFBP^ENSG00000198954.9

chr10:69000424:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1435:39937:24358

YES_LDAS

0.0034

1.9656

"[""INTERCHROMOSOMAL[chr1--chr10]""]"

chr1:225417984-chr10:69000424

False

Read

count

too

low:

FAIL

LAS1L--RNF38

1.0

0.0

ONLY_REF_SPLICE

LAS1L^ENSG00000001497.18

chrX:65517987:-

RNF38^ENSG00000137075.18

chr9:36352848:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2138:33562:8637

YES_LDAS

0.0034

1.9219

1.4295

"[""INTERCHROMOSOMAL[chrX--chr9]""]"

chrX:65517987-chr9:36352848

False

Read

count

too

low:

FAIL

LARP4B--THOC1

1.0

0.0

ONLY_REF_SPLICE

LARP4B^ENSG00000107929.15

chr10:829385:-

THOC1^ENSG00000079134.12

chr18:259730:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2222:22228:17843

YES_LDAS

0.0034

1.7968

1.5058

"[""INTERCHROMOSOMAL[chr10--chr18]""]"

chr10:829385-chr18:259730

False

Read

count

too

low:

FAIL

LACTB--PRRT3

1.0

0.0

INCL_NON_REF_SPLICE

LACTB^ENSG00000103642.12

chr15:63130438:+

PRRT3^ENSG00000163704.12

chr3:9945922:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2147:5077:25409

YES_LDAS

0.0034

1.9329

1.8295

"[""INTERCHROMOSOMAL[chr15--chr3]""]"

chr15:63130438-chr3:9945922

False

Read

count

too

low:

FAIL

LACRT--HS6ST3

1.0

0.0

INCL_NON_REF_SPLICE

LACRT^ENSG00000135413.9

chr12:54631918:-

HS6ST3^ENSG00000185352.9

chr13:96090643:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2229:45050:9225

NO_LDAS

0.0034

0.6998

0.971

"[""INTERCHROMOSOMAL[chr12--chr13]""]"

chr12:54631918-chr13:96090643

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

L3MBTL1--MAPRE3

1.0

0.0

INCL_NON_REF_SPLICE

L3MBTL1^ENSG00000185513.17

chr20:43532392:+

MAPRE3^ENSG00000084764.12

chr2:27026280:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2371:48739:8525

NO_LDAS

0.0034

1.9329

"[""INTERCHROMOSOMAL[chr20--chr2]""]"

chr20:43532392-chr2:27026280

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

KSR1--ACAD9

1.0

0.0

INCL_NON_REF_SPLICE

KSR1^ENSG00000141068.14

chr17:27604706:+

ACAD9^ENSG00000177646.20

chr3:128884035:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2145:2569:16666

YES_LDAS

0.0034

1.9086

1.8062

"[""INTERCHROMOSOMAL[chr17--chr3]""]"

chr17:27604706-chr3:128884035

False

Read

count

too

low:

FAIL

KRT79--KRT81

1.0

0.0

ONLY_REF_SPLICE

KRT79^ENSG00000185640.6

chr12:52824198:-

KRT81^ENSG00000205426.10

chr12:52287721:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1402:23701:20841

YES_LDAS

0.0034

1.9329

1.5058

"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr12:0.53Mb]""]"

chr12:52824198-chr12:52287721

False

Excluded

annotation

pattern:

DGD_PARALOGS

FAIL

KRBA1--SEPTIN11

1.0

0.0

INCL_NON_REF_SPLICE

KRBA1^ENSG00000133619.17

chr7:149731776:+

SEPTIN11^ENSG00000138758.12

chr4:76974487:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1360:33206:24190

NO_LDAS

0.0034

1.9329

1.5656

"[""INTERCHROMOSOMAL[chr7--chr4]""]"

chr7:149731776-chr4:76974487

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

KLHL21--AC131254.3

0.5

0.0

INCL_NON_REF_SPLICE

KLHL21^ENSG00000162413.16

chr1:6602149:-

AC131254.3^ENSG00000254086.1

chr8:29871588:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2298:32980:12196

NO_LDAS

0.0017

1.8323

1.4256

"[""INTERCHROMOSOMAL[chr1--chr8]""]"

chr1:6602149-chr8:29871588

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

KLF3--TBC1D1

1.0

0.0

ONLY_REF_SPLICE

KLF3^ENSG00000109787.13

chr4:38680682:+

TBC1D1^ENSG00000065882.16

chr4:38035588:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2333:23037:14732

YES_LDAS

0.0034

1.9329

1.7968

"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr4:0.53Mb]""]"

chr4:38680682-chr4:38035588

False

Read

count

too

low:

FAIL

KLF15--HNRNPF

1.0

0.0

INCL_NON_REF_SPLICE

KLF15^ENSG00000163884.4

chr3:126343154:-

HNRNPF^ENSG00000169813.16

chr10:43386893:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2414:17746:28576

YES_LDAS

0.0034

0.0

1.7819

"[""INTERCHROMOSOMAL[chr3--chr10]""]"

chr3:126343154-chr10:43386893

False

Read

count

too

low:

FAIL

KIRREL3--RNF141

1.0

0.0

ONLY_REF_SPLICE

KIRREL3^ENSG00000149571.12

chr11:127000455:-

RNF141^ENSG00000110315.7

chr11:10534205:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2486:30504:23910

NO_LDAS

0.0034

1.9086

1.8295

"[""INTRACHROMOSOMAL[chr11:115.88Mb]""]"

chr11:127000455-chr11:10534205

False

Read

count

too

low:

FAIL

KIFAP3--AL390957.1

1.0

0.0

INCL_NON_REF_SPLICE

KIFAP3^ENSG00000075945.13

chr1:170074436:-

AL390957.1^ENSG00000285280.2

chr1:192957422:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1296:22317:25984

YES_LDAS

0.0034

1.7968

1.9329

"[""INTRACHROMOSOMAL[chr1:22.08Mb]""]"

chr1:170074436-chr1:192957422

False

Read

count

too

low:

FAIL

KIAA2026--HIPK3

1.0

0.0

ONLY_REF_SPLICE

KIAA2026^ENSG00000183354.12

chr9:6007195:-

HIPK3^ENSG00000110422.12

chr11:33328510:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1121:44581:7712

NO_LDAS

0.0034

1.7819

1.9656

"[""INTERCHROMOSOMAL[chr9--chr11]""]"

chr9:6007195-chr11:33328510

False

Read

count

too

low:

FAIL

KIAA1586--ABBA01000935.2

0.33

0.0

ONLY_REF_SPLICE

KIAA1586^ENSG00000168116.14

chr6:57047396:+

ABBA01000935.2^ENSG00000283544.1

chr3:91388034:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1314:22350:7936

YES_LDAS

0.0011

1.8295

1.4566

"[""INTERCHROMOSOMAL[chr6--chr3]""]"

chr6:57047396-chr3:91388034

False

Read

count

too

low:

FAIL

KIAA0930--GPBP1L1

1.0

0.0

INCL_NON_REF_SPLICE

KIAA0930^ENSG00000100364.19

chr22:45197909:-

GPBP1L1^ENSG00000159592.11

chr1:45633542:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2414:25116:7572

YES_LDAS

0.0034

1.5656

1.8323

"[""INTERCHROMOSOMAL[chr22--chr1]""]"

chr22:45197909-chr1:45633542

False

Read

count

too

low:

FAIL

KIAA0825--FAM172A

1.0

0.0

ONLY_REF_SPLICE

KIAA0825^ENSG00000185261.14

chr5:94384368:-

FAM172A^ENSG00000113391.19

chr5:94053227:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1119:4996:11930

YES_LDAS

0.0034

1.8892

1.6895

"[""ChimerSeq"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[41267]""]"

chr5:94384368-chr5:94053227

True

pair|recurrent

breakpoints

Blacklisted

FAIL

KIAA0513--AC087465.1

0.33

0.0

INCL_NON_REF_SPLICE

KIAA0513^ENSG00000135709.12

chr16:85091998:+

AC087465.1^ENSG00000259722.2

chr15:77204894:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1428:35496:11621

YES_LDAS

0.0011

1.8892

1.7465

"[""INTERCHROMOSOMAL[chr16--chr15]""]"

chr16:85091998-chr15:77204894

False

Read

count

too

low:

FAIL

KDM7A--ZADH2

1.0

0.0

ONLY_REF_SPLICE

KDM7A^ENSG00000006459.11

chr7:140176744:-

ZADH2^ENSG00000180011.7

chr18:75202340:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1253:45398:7109

YES_LDAS

0.0034

1.9086

1.4566

"[""INTERCHROMOSOMAL[chr7--chr18]""]"

chr7:140176744-chr18:75202340

False

Read

count

too

low:

FAIL

KDM7A--PHF8

1.0

0.0

ONLY_REF_SPLICE

KDM7A^ENSG00000006459.11

chr7:140119113:-

PHF8^ENSG00000172943.20

chrX:54002682:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1204:25796:7712

NO_LDAS

0.0034

1.8892

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr7--chrX]""]"

chr7:140119113-chrX:54002682

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

KDM6A--TXLNG

1.0

0.0

ONLY_REF_SPLICE

KDM6A^ENSG00000147050.16

chrX:44873987:+

TXLNG^ENSG00000086712.13

chrX:16818574:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1403:41871:7249

YES_LDAS

0.0034

1.9086

"[""INTRACHROMOSOMAL[chrX:28.03Mb]""]"

chrX:44873987-chrX:16818574

False

Read

count

too

low:

FAIL

KDM4A--ST3GAL3

1.0

0.0

ONLY_REF_SPLICE

KDM4A^ENSG00000066135.13

chr1:43704112:+

ST3GAL3^ENSG00000126091.21

chr1:43736233:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1480:6137:21444

YES_LDAS

0.0034

1.9656

1.9086

"[""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.00Mb]"",""NEIGHBORS[306]""]"

chr1:43704112-chr1:43736233

True

pair|recurrent

breakpoints

Blacklisted

FAIL

KCTD6--AC016888.1

1.0

0.0

INCL_NON_REF_SPLICE

KCTD6^ENSG00000168301.13

chr3:58492169:+

AC016888.1^ENSG00000266036.1

chr17:74748653:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1277:16913:29515

NO_LDAS

0.0034

1.231

1.3753

"[""INTERCHROMOSOMAL[chr3--chr17]""]"

chr3:58492169-chr17:74748653

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

KCTD15--TSPAN15

1.0

0.0

ONLY_REF_SPLICE

KCTD15^ENSG00000153885.14

chr19:33807007:+

TSPAN15^ENSG00000099282.10

chr10:69506124:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1403:50147:10626

YES_LDAS

0.0034

1.9899

1.9086

"[""INTERCHROMOSOMAL[chr19--chr10]""]"

chr19:33807007-chr10:69506124

False

Read

count

too

low:

FAIL

KCNQ1OT1--CEP295NL

1.0

0.0

INCL_NON_REF_SPLICE

KCNQ1OT1^ENSG00000269821.1

chr11:2692022:-

CEP295NL^ENSG00000178404.10

chr17:78870948:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2347:13669:22887

YES_LDAS

0.0034

1.9086

1.5058

"[""INTERCHROMOSOMAL[chr11--chr17]""]"

chr11:2692022-chr17:78870948

False

Read

count

too

low:

FAIL

KCNIP2--DMXL1

1.0

0.0

INCL_NON_REF_SPLICE

KCNIP2^ENSG00000120049.20

chr10:101828250:-

DMXL1^ENSG00000172869.14

chr5:119148830:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1364:32559:22705

NO_LDAS

0.0034

1.9329

1.7968

"[""INTERCHROMOSOMAL[chr10--chr5]""]"

chr10:101828250-chr5:119148830

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

KCNC1--CARD14

1.0

0.0

INCL_NON_REF_SPLICE

KCNC1^ENSG00000129159.9

chr11:17776172:+

CARD14^ENSG00000141527.18

chr17:80205587:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2237:25141:12854

NO_LDAS

0.0034

1.4566

1.7232

"[""INTERCHROMOSOMAL[chr11--chr17]""]"

chr11:17776172-chr17:80205587

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

KCMF1--LETM2

1.0

0.0

INCL_NON_REF_SPLICE

KCMF1^ENSG00000176407.18

chr2:85056963:+

LETM2^ENSG00000165046.13

chr8:38393432:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1374:10312:24302

YES_LDAS

0.0034

1.8295

1.9086

"[""INTERCHROMOSOMAL[chr2--chr8]""]"

chr2:85056963-chr8:38393432

False

Read

count

too

low:

FAIL

KANSL3--CACNA1B

1.0

0.0

INCL_NON_REF_SPLICE

KANSL3^ENSG00000114982.19

chr2:96612462:-

CACNA1B^ENSG00000148408.13

chr9:138123968:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1290:9438:12112

NO_LDAS

0.0034

1.8323

1.7819

"[""INTERCHROMOSOMAL[chr2--chr9]""]"

chr2:96612462-chr9:138123968

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

JDP2--BAX

1.0

0.0

ONLY_REF_SPLICE

JDP2^ENSG00000140044.13

chr14:75438121:+

BAX^ENSG00000087088.20

chr19:48960810:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2195:8564:12364

YES_LDAS

0.0034

1.9086

1.8892

"[""INTERCHROMOSOMAL[chr14--chr19]""]"

chr14:75438121-chr19:48960810

False

Read

count

too

low:

FAIL

ITGA9-AS1--TARS2

1.0

0.0

INCL_NON_REF_SPLICE

ITGA9-AS1^ENSG00000235257.9

chr3:37795831:-

TARS2^ENSG00000143374.17

chr1:150504906:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2176:25286:5988

NO_LDAS

0.0034

1.7232

1.8256

"[""INTERCHROMOSOMAL[chr3--chr1]""]"

chr3:37795831-chr1:150504906

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ITGA1--DOCK2

1.0

0.0

ONLY_REF_SPLICE

ITGA1^ENSG00000213949.10

chr5:52788414:+

DOCK2^ENSG00000134516.18

chr5:169681744:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1161:9373:22957

YES_LDAS

0.0034

1.8062

1.9656

"[""INTRACHROMOSOMAL[chr5:116.68Mb]""]"

chr5:52788414-chr5:169681744

False

Read

count

too

low:

FAIL

ITGA1--DMXL1

1.0

0.0

ONLY_REF_SPLICE

ITGA1^ENSG00000213949.10

chr5:52788414:+

DMXL1^ENSG00000172869.14

chr5:119097979:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1312:33101:16021

YES_LDAS

0.0034

1.8062

1.9656

"[""INTRACHROMOSOMAL[chr5:66.08Mb]""]"

chr5:52788414-chr5:119097979

False

Read

count

too

low:

FAIL

ISG15--AC007993.2

1.0

0.0

INCL_NON_REF_SPLICE

ISG15^ENSG00000187608.10

chr1:1014423:+

AC007993.2^ENSG00000267420.1

chr17:43932542:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2203:16193:25550

NO_LDAS

0.0034

1.7968

1.8062

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:1014423-chr17:43932542

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

IREB2--SLC22A3

1.0

0.0

ONLY_REF_SPLICE

IREB2^ENSG00000136381.13

chr15:78439881:+

SLC22A3^ENSG00000146477.6

chr6:160397979:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1353:34727:26937

YES_LDAS

0.0034

1.9899

1.6729

"[""INTERCHROMOSOMAL[chr15--chr6]""]"

chr15:78439881-chr6:160397979

False

Read

count

too

low:

FAIL

IQANK1--GLI4

1.0

0.0

ONLY_REF_SPLICE

IQANK1^ENSG00000203499.12

chr8:143739948:+

GLI4^ENSG00000250571.7

chr8:143269360:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1394:8087:20589

NO_LDAS

0.0034

1.4566

1.9656

"[""INTRACHROMOSOMAL[chr8:0.46Mb]""]"

chr8:143739948-chr8:143269360

False

Read

count

too

low:

FAIL

IPO9--FBXL5

1.0

0.0

INCL_NON_REF_SPLICE

IPO9^ENSG00000198700.10

chr1:201848594:+

FBXL5^ENSG00000118564.15

chr4:15659774:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1449:36329:1687

NO_LDAS

0.0034

1.8892

1.7232

"[""INTERCHROMOSOMAL[chr1--chr4]""]"

chr1:201848594-chr4:15659774

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

IP6K1--TRAF3

1.0

0.0

INCL_NON_REF_SPLICE

IP6K1^ENSG00000176095.12

chr3:49785393:-

TRAF3^ENSG00000131323.16

chr14:102870185:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1409:14559:28128

YES_LDAS

0.0034

1.8892

1.5219

"[""INTERCHROMOSOMAL[chr3--chr14]""]"

chr3:49785393-chr14:102870185

False

Read

count

too

low:

FAIL

INVS--PDSS2

1.0

0.0

ONLY_REF_SPLICE

INVS^ENSG00000119509.13

chr9:100126549:+

PDSS2^ENSG00000164494.12

chr6:107334332:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1370:34614:29459

YES_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr9--chr6]""]"

chr9:100126549-chr6:107334332

False

Read

count

too

low:

FAIL

INMT--MINDY4

1.0

0.0

ONLY_REF_SPLICE

INMT^ENSG00000241644.2

chr7:30753938:+

MINDY4^ENSG00000106125.14

chr7:30778432:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1160:33449:25564

NO_LDAS

0.0034

1.7056

1.7968

"[""INTRACHROMOSOMAL[chr7:0.01Mb]"",""NEIGHBORS[13815]""]"

chr7:30753938-chr7:30778432

True

pair|recurrent

breakpoints

Blacklisted

FAIL

IMPA2--RAB3IL1

1.0

0.0

INCL_NON_REF_SPLICE

IMPA2^ENSG00000141401.12

chr18:12028977:+

RAB3IL1^ENSG00000167994.13

chr11:61907421:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1365:17900:7852

NO_LDAS

0.0034

1.8062

1.6895

"[""INTERCHROMOSOMAL[chr18--chr11]""]"

chr18:12028977-chr11:61907421

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

IMPA1--NAALADL2

1.0

0.0

ONLY_REF_SPLICE

IMPA1^ENSG00000133731.10

chr8:81679126:-

NAALADL2^ENSG00000177694.16

chr3:175256411:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2215:18766:17450

YES_LDAS

0.0034

1.8323

1.9899

"[""INTERCHROMOSOMAL[chr8--chr3]""]"

chr8:81679126-chr3:175256411

False

Read

count

too

low:

FAIL

IMMP1L--DTNB

1.0

0.0

INCL_NON_REF_SPLICE

IMMP1L^ENSG00000148950.11

chr11:31452718:-

DTNB^ENSG00000138101.19

chr2:25596226:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1365:44678:24499

YES_LDAS

0.0034

1.7232

1.9086

"[""INTERCHROMOSOMAL[chr11--chr2]""]"

chr11:31452718-chr2:25596226

False

Read

count

too

low:

FAIL

IMMP1L--BTBD10

1.0

0.0

ONLY_REF_SPLICE

IMMP1L^ENSG00000148950.11

chr11:31509519:-

BTBD10^ENSG00000148925.11

chr11:13421838:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2118:49119:17282

YES_LDAS

0.0034

1.8062

1.8323

"[""INTRACHROMOSOMAL[chr11:17.97Mb]""]"

chr11:31509519-chr11:13421838

False

Read

count

too

low:

FAIL

IL17REL--ADGRB1

1.0

0.0

INCL_NON_REF_SPLICE

IL17REL^ENSG00000188263.10

chr22:49998070:-

ADGRB1^ENSG00000181790.11

chr8:142449704:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2336:30464:15236

NO_LDAS

0.0034

1.6049

1.231

"[""INTERCHROMOSOMAL[chr22--chr8]""]"

chr22:49998070-chr8:142449704

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

IK--NPC1

1.0

0.0

ONLY_REF_SPLICE

IK^ENSG00000113141.18

chr5:140648980:+

NPC1^ENSG00000141458.13

chr18:23548108:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1174:44662:1098

NO_LDAS

0.0034

1.9329

1.371

"[""INTERCHROMOSOMAL[chr5--chr18]""]"

chr5:140648980-chr18:23548108

False

Read

count

too

low:

FAIL

IGSF1--RAB7A

1.0

0.0

ONLY_REF_SPLICE

IGSF1^ENSG00000147255.19

chrX:131299651:-

RAB7A^ENSG00000075785.14

chr3:128795360:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2195:21282:11075

NO_LDAS

0.0034

1.9656

1.9329

"[""INTERCHROMOSOMAL[chrX--chr3]""]"

chrX:131299651-chr3:128795360

False

Read

count

too

low:

FAIL

IGSF1--MYO5A

1.0

0.0

ONLY_REF_SPLICE

IGSF1^ENSG00000147255.19

chrX:131299651:-

MYO5A^ENSG00000197535.15

chr15:52433285:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2235:45220:14312

NO_LDAS

0.0034

1.9656

1.7056

"[""INTERCHROMOSOMAL[chrX--chr15]""]"

chrX:131299651-chr15:52433285

False

Read

count

too

low:

FAIL

IFI27L2--OR10T2

1.0

0.0

INCL_NON_REF_SPLICE

IFI27L2^ENSG00000119632.4

chr14:94128510:-

OR10T2^ENSG00000186306.1

chr1:158399308:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1343:17504:6185

NO_LDAS

0.0034

1.9219

1.8295

"[""INTERCHROMOSOMAL[chr14--chr1]""]"

chr14:94128510-chr1:158399308

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

IDE--SHLD2P1

0.5

0.0

ONLY_REF_SPLICE

IDE^ENSG00000119912.18

chr10:92555372:-

SHLD2P1^ENSG00000165874.13

chr10:46611449:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1234:38044:28450

YES_LDAS

0.0017

1.9329

1.9086

"[""INTRACHROMOSOMAL[chr10:45.80Mb]""]"

chr10:92555372-chr10:46611449

False

Read

count

too

low:

FAIL

ID4--AC012615.2

0.1

0.0

INCL_NON_REF_SPLICE

ID4^ENSG00000172201.12

chr6:19837902:+

AC012615.2^ENSG00000267007.1

chr19:1815774:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2175:30326:17296

NO_LDAS

0.0003

1.5628

1.4716

"[""INTERCHROMOSOMAL[chr6--chr19]""]"

chr6:19837902-chr19:1815774

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ICAM1--RN7SL619P

1.0

0.0

INCL_NON_REF_SPLICE

ICAM1^ENSG00000090339.9

chr19:10282342:+

RN7SL619P^ENSG00000266770.2

chr19:13815265:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2329:11646:23756

NO_LDAS

0.0034

1.5546

1.9656

"[""INTRACHROMOSOMAL[chr19:3.53Mb]""]"

chr19:10282342-chr19:13815265

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HTRA2--LRRC4B

1.0

0.0

INCL_NON_REF_SPLICE

HTRA2^ENSG00000115317.12

chr2:74531925:+

LRRC4B^ENSG00000131409.13

chr19:50518671:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2120:13119:9800

NO_LDAS

0.0034

1.8892

1.8295

"[""INTERCHROMOSOMAL[chr2--chr19]""]"

chr2:74531925-chr19:50518671

True

pair|recurrent

breakpoints

Blacklisted

FAIL

HTRA1--PPM1D

1.0

0.0

ONLY_REF_SPLICE

HTRA1^ENSG00000166033.13

chr10:122462124:+

PPM1D^ENSG00000170836.12

chr17:60623521:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2489:27212:15937

YES_LDAS

0.0034

1.7819

"[""INTERCHROMOSOMAL[chr10--chr17]""]"

chr10:122462124-chr17:60623521

False

Read

count

too

low:

FAIL

HSPA9--LAMA3

0.5

0.0

INCL_NON_REF_SPLICE

HSPA9^ENSG00000113013.16

chr5:138567001:-

LAMA3^ENSG00000053747.17

chr18:23946595:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2120:9826:3873

NO_LDAS

0.0017

1.7056

1.8062

"[""INTERCHROMOSOMAL[chr5--chr18]""]"

chr5:138567001-chr18:23946595

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HSPA9--AL731532.2

0.5

0.0

INCL_NON_REF_SPLICE

HSPA9^ENSG00000113013.16

chr5:138567001:-

AL731532.2^ENSG00000280134.1

chr10:85556266:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2120:9826:3873

NO_LDAS

0.0017

1.7056

1.7819

"[""INTERCHROMOSOMAL[chr5--chr10]""]"

chr5:138567001-chr10:85556266

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HS2ST1--TET3

1.0

0.0

INCL_NON_REF_SPLICE

HS2ST1^ENSG00000153936.17

chr1:86915007:+

TET3^ENSG00000187605.16

chr2:73984913:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1255:7941:2906

NO_LDAS

0.0034

1.053

1.7465

"[""INTERCHROMOSOMAL[chr1--chr2]""]"

chr1:86915007-chr2:73984913

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

HS2ST1--SELENOF

1.0

0.0

ONLY_REF_SPLICE

HS2ST1^ENSG00000153936.17

chr1:86915160:+

SELENOF^ENSG00000183291.17

chr1:86880725:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1190:19494:21234

YES_LDAS

0.0034

1.8892

1.9656

"[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_INVERSION:+:-:[211]""]"

chr1:86915160-chr1:86880725

True

pair|recurrent

breakpoints

Blacklisted

FAIL

HRH1--ATG7

1.0

0.0

ONLY_REF_SPLICE

HRH1^ENSG00000196639.7

chr3:11154554:+

ATG7^ENSG00000197548.12

chr3:11298686:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1223:14340:23574

YES_LDAS

0.0034

1.2867

1.7968

"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[8752]""]"

chr3:11154554-chr3:11298686

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

HOXA4--AL009176.1

1.0

0.0

INCL_NON_REF_SPLICE

HOXA4^ENSG00000197576.14

chr7:27129243:-

AL009176.1^ENSG00000285887.1

chr6:169424356:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1180:35059:9632

NO_LDAS

0.0034

1.4716

0.9056

"[""INTERCHROMOSOMAL[chr7--chr6]""]"

chr7:27129243-chr6:169424356

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HOXA13--TRMT61A

1.0

0.0

INCL_NON_REF_SPLICE

HOXA13^ENSG00000106031.9

chr7:27199677:-

TRMT61A^ENSG00000166166.13

chr14:103536845:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1125:41709:9576

NO_LDAS

0.0034

1.231

1.7465

"[""INTERCHROMOSOMAL[chr7--chr14]""]"

chr7:27199677-chr14:103536845

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HOXA10--CCAR1

0.33

0.0

INCL_NON_REF_SPLICE

HOXA10^ENSG00000253293.5

chr7:27171603:-

CCAR1^ENSG00000060339.14

chr10:68742405:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1168:47582:20477

NO_LDAS

0.0011

1.4295

1.6895

"[""INTERCHROMOSOMAL[chr7--chr10]""]"

chr7:27171603-chr10:68742405

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HOMER3-AS1--U3

1.0

0.0

INCL_NON_REF_SPLICE

HOMER3-AS1^ENSG00000269019.2

chr19:18946232:+

U3^ENSG00000221496.2

chr17:44303938:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1492:27891:14956

YES_LDAS

0.0034

1.8256

1.8892

"[""INTERCHROMOSOMAL[chr19--chr20]""]"

chr19:18946232-chr17:44303938

False

Read

count

too

low:

FAIL

HNRNPLL--ATL2

1.0

0.0

ONLY_REF_SPLICE

HNRNPLL^ENSG00000143889.16

chr2:38602438:-

ATL2^ENSG00000119787.14

chr2:38343512:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1140:34290:22313

NO_LDAS

0.0034

1.8892

1.5656

"[""INTRACHROMOSOMAL[chr2:0.18Mb]""]"

chr2:38602438-chr2:38343512

True

pair|recurrent

breakpoints

Blacklisted

FAIL

HNRNPDL--ABCC12

1.0

0.0

INCL_NON_REF_SPLICE

HNRNPDL^ENSG00000152795.18

chr4:82428018:-

ABCC12^ENSG00000140798.16

chr16:48083405:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1204:33133:13611

NO_LDAS

0.0034

1.8295

1.4295

"[""INTERCHROMOSOMAL[chr4--chr16]""]"

chr4:82428018-chr16:48083405

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HNRNPA1--MARS1

0.2

0.0

ONLY_REF_SPLICE

HNRNPA1^ENSG00000135486.19

chr12:54281502:+

MARS1^ENSG00000166986.15

chr12:57490538:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1475:41620:9954

YES_LDAS

0.0007

1.9329

1.7232

"[""INTRACHROMOSOMAL[chr12:3.19Mb]""]"

chr12:54281502-chr12:57490538

False

Read

count

too

low:

FAIL

HNMT--WDR27

1.0

0.0

INCL_NON_REF_SPLICE

HNMT^ENSG00000150540.14

chr2:138005229:+

WDR27^ENSG00000184465.16

chr6:169669530:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1149:14518:28310

NO_LDAS

0.0034

1.7819

1.5546

"[""INTERCHROMOSOMAL[chr2--chr6]""]"

chr2:138005229-chr6:169669530

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HMGN2P3--PIKFYVE

1.0

0.0

INCL_NON_REF_SPLICE

HMGN2P3^ENSG00000230330.1

chr16:26032659:-

PIKFYVE^ENSG00000115020.17

chr2:208298716:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1320:3484:17717

NO_LDAS

0.0034

0.9968

1.8295

"[""INTERCHROMOSOMAL[chr16--chr2]""]"

chr16:26032659-chr2:208298716

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HMGCS1--RICTOR

1.0

0.0

ONLY_REF_SPLICE

HMGCS1^ENSG00000112972.15

chr5:43292474:-

RICTOR^ENSG00000164327.13

chr5:39021136:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2106:49435:11019

YES_LDAS

0.0034

1.8295

1.8256

"[""INTRACHROMOSOMAL[chr5:4.21Mb]""]"

chr5:43292474-chr5:39021136

False

Read

count

too

low:

FAIL

HMGB3P4--AP003497.1

1.0

0.0

INCL_NON_REF_SPLICE

HMGB3P4^ENSG00000228808.1

chr13:99372517:+

AP003497.1^ENSG00000255391.1

chr11:87481083:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1487:19308:12644

NO_LDAS

0.0034

1.7056

1.8323

"[""INTERCHROMOSOMAL[chr13--chr11]""]"

chr13:99372517-chr11:87481083

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HMGB2--INO80B

0.5

0.0

INCL_NON_REF_SPLICE

HMGB2^ENSG00000164104.12

chr4:173333195:-

INO80B^ENSG00000115274.15

chr2:74455471:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1290:35965:5876

NO_LDAS

0.0017

1.8323

1.2419

"[""INTERCHROMOSOMAL[chr4--chr2]""]"

chr4:173333195-chr2:74455471

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HMGB2--HMGB1P16

0.5

0.0

INCL_NON_REF_SPLICE

HMGB2^ENSG00000164104.12

chr4:173333195:-

HMGB1P16^ENSG00000229384.2

chrX:36211189:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1290:35965:5876

NO_LDAS

0.0017

1.8323

1.3383

"[""INTERCHROMOSOMAL[chr4--chrX]""]"

chr4:173333195-chrX:36211189

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HMGB1P8--C1orf131

1.0

0.0

INCL_NON_REF_SPLICE

HMGB1P8^ENSG00000259699.2

chr15:89135927:-

C1orf131^ENSG00000143633.13

chr1:231226632:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1226:39460:16918

NO_LDAS

0.0034

0.3534

1.9219

"[""INTERCHROMOSOMAL[chr15--chr1]""]"

chr15:89135927-chr1:231226632

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HMGA2--AL049796.1

0.5

0.0

INCL_NON_REF_SPLICE

HMGA2^ENSG00000149948.14

chr12:65824656:+

AL049796.1^ENSG00000260464.1

chr1:93847620:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1181:1380:15615

NO_LDAS

0.0017

1.7968

1.9899

"[""INTERCHROMOSOMAL[chr12--chr1]""]"

chr12:65824656-chr1:93847620

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HLCS--PLA2G4F

1.0

0.0

INCL_NON_REF_SPLICE

HLCS^ENSG00000159267.16

chr21:36930307:-

PLA2G4F^ENSG00000168907.13

chr15:42147665:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2312:43456:7558

YES_LDAS

0.0034

1.7465

1.8892

"[""INTERCHROMOSOMAL[chr21--chr15]""]"

chr21:36930307-chr15:42147665

False

Read

count

too

low:

FAIL

HIVEP2--FLT1

1.0

0.0

INCL_NON_REF_SPLICE

HIVEP2^ENSG00000010818.10

chr6:142945107:-

FLT1^ENSG00000102755.12

chr13:28494946:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1255:9923:18109

NO_LDAS

0.0034

0.9968

0.9183

"[""INTERCHROMOSOMAL[chr6--chr13]""]"

chr6:142945107-chr13:28494946

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HIBADH--TAX1BP1

1.0

0.0

ONLY_REF_SPLICE

HIBADH^ENSG00000106049.9

chr7:27662698:-

TAX1BP1^ENSG00000106052.13

chr7:27827738:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1233:41353:14508

YES_LDAS

0.0034

1.8892

1.5219

"[""INTRACHROMOSOMAL[chr7:0.08Mb]"",""LOCAL_INVERSION:-:+:[76448]""]"

chr7:27662698-chr7:27827738

False

Read

count

too

low:

FAIL

HEXA--SSR2

1.0

0.0

INCL_NON_REF_SPLICE

HEXA^ENSG00000213614.10

chr15:72355508:-

SSR2^ENSG00000163479.14

chr1:156014623:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1386:6865:22369

YES_LDAS

0.0034

1.4566

1.9219

"[""INTERCHROMOSOMAL[chr15--chr1]""]"

chr15:72355508-chr1:156014623

False

Read

count

too

low:

FAIL

HES1--RPAIN

1.0

0.0

INCL_NON_REF_SPLICE

HES1^ENSG00000114315.4

chr3:194138155:+

RPAIN^ENSG00000129197.15

chr17:5428673:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1145:26370:21038

YES_LDAS

0.0034

1.7465

1.8323

"[""INTERCHROMOSOMAL[chr3--chr17]""]"

chr3:194138155-chr17:5428673

False

Read

count

too

low:

FAIL

HERC4--ATG14

0.5

0.0

ONLY_REF_SPLICE

HERC4^ENSG00000148634.16

chr10:67996046:-

ATG14^ENSG00000126775.9

chr14:55378074:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1389:39347:22074

NO_LDAS

0.0017

1.8892

1.7819

"[""INTERCHROMOSOMAL[chr10--chr14]""]"

chr10:67996046-chr14:55378074

False

Read

count

too

low:

FAIL

HDAC3--SPRY4

1.0

0.0

ONLY_REF_SPLICE

HDAC3^ENSG00000171720.10

chr5:141636548:-

SPRY4^ENSG00000187678.10

chr5:142315155:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1468:21023:11383

YES_LDAS

0.0034

1.7465

1.8892

"[""INTRACHROMOSOMAL[chr5:0.67Mb]""]"

chr5:141636548-chr5:142315155

False

Read

count

too

low:

FAIL

HCG18--RN7SL341P

1.0

0.0

INCL_NON_REF_SPLICE

HCG18^ENSG00000231074.9

chr6:30296191:-

RN7SL341P^ENSG00000275588.1

chr2:64817370:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1158:46433:24401

NO_LDAS

0.0034

1.9656

1.8256

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:30296191-chr2:64817370

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HAUS6--SP100

1.0

0.0

INCL_NON_REF_SPLICE

HAUS6^ENSG00000147874.11

chr9:19056732:-

SP100^ENSG00000067066.17

chr2:230544615:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2148:21824:9632

NO_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr9--chr2]""]"

chr9:19056732-chr2:230544615

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

HAGH--PRMT5

1.0

0.0

ONLY_REF_SPLICE

HAGH^ENSG00000063854.13

chr16:1816893:-

PRMT5^ENSG00000100462.16

chr14:22926814:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1489:40204:15685

YES_LDAS

0.0034

1.8323

"[""INTERCHROMOSOMAL[chr16--chr14]""]"

chr16:1816893-chr14:22926814

False

Read

count

too

low:

FAIL

HADH--EEA1

1.0

0.0

ONLY_REF_SPLICE

HADH^ENSG00000138796.17

chr4:107990064:+

EEA1^ENSG00000102189.17

chr12:92891721:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2207:34606:15601

NO_LDAS

0.0034

1.8323

1.9656

"[""INTERCHROMOSOMAL[chr4--chr12]""]"

chr4:107990064-chr12:92891721

False

Read

count

too

low:

FAIL

H3-3B--Z82202.2

1.0

0.0

INCL_NON_REF_SPLICE

H3-3B^ENSG00000132475.10

chr17:75778932:-

Z82202.2^ENSG00000285623.1

chr22:49166432:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1331:6226:2850

NO_LDAS

0.0034

1.9656

1.371

"[""INTERCHROMOSOMAL[chr17--chr22]""]"

chr17:75778932-chr22:49166432

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

H3-3A--AMBRA1

1.0

0.0

ONLY_REF_SPLICE

H3-3A^ENSG00000163041.13

chr1:226062811:+

AMBRA1^ENSG00000110497.14

chr11:46548454:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1183:36103:1490

YES_LDAS

0.0034

1.231

1.7465

"[""INTERCHROMOSOMAL[chr1--chr11]""]"

chr1:226062811-chr11:46548454

False

Read

count

too

low:

FAIL

H2BC21--H4C14

1.0

0.0

INCL_NON_REF_SPLICE

H2BC21^ENSG00000184678.10

chr1:149886264:-

H4C14^ENSG00000270882.2

chr1:149839595:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2320:26362:25564

YES_LDAS

0.0034

1.8323

1.9899

"[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""LOCAL_INVERSION:-:+:[44692]""]"

chr1:149886264-chr1:149839595

False

Read

count

too

low:

FAIL

H2BC17--CCPG1

1.0

0.0

INCL_NON_REF_SPLICE

H2BC17^ENSG00000274641.2

chr6:27893981:+

CCPG1^ENSG00000260916.8

chr15:55389433:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2180:49419:23097

YES_LDAS

0.0034

1.4295

1.9656

"[""INTERCHROMOSOMAL[chr6--chr15]""]"

chr6:27893981-chr15:55389433

False

Read

count

too

low:

FAIL

H2AZ2P1--ARPP19

1.0

0.0

ONLY_REF_SPLICE

H2AZ2P1^ENSG00000258741.4

chr15:92733985:-

ARPP19^ENSG00000128989.11

chr15:52568902:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1267:12739:6983

YES_LDAS

0.0034

1.8295

1.9656

"[""INTRACHROMOSOMAL[chr15:40.14Mb]""]"

chr15:92733985-chr15:52568902

False

Read

count

too

low:

FAIL

GYPC--ARHGAP15

1.0

0.0

ONLY_REF_SPLICE

GYPC^ENSG00000136732.16

chr2:126656312:+

ARHGAP15^ENSG00000075884.14

chr2:143487373:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1324:46636:9253

YES_LDAS

0.0034

1.7465

1.9656

"[""INTRACHROMOSOMAL[chr2:16.39Mb]""]"

chr2:126656312-chr2:143487373

False

Read

count

too

low:

FAIL

GYG2--ARSF

0.33

0.0

ONLY_REF_SPLICE

GYG2^ENSG00000056998.20

chrX:2843354:+

ARSF^ENSG00000062096.15

chrX:3072026:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1182:11129:29389

YES_LDAS

0.0011

1.8892

1.9329

"[""INTRACHROMOSOMAL[chrX:0.16Mb]""]"

chrX:2843354-chrX:3072026

False

Read

count

too

low:

FAIL

GTPBP2--AL360012.1

1.0

0.0

INCL_NON_REF_SPLICE

GTPBP2^ENSG00000172432.19

chr6:43624888:-

AL360012.1^ENSG00000270103.3

chr1:28648606:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1132:11946:28142

NO_LDAS

0.0034

1.9899

1.7819

"[""INTERCHROMOSOMAL[chr6--chr1]""]"

chr6:43624888-chr1:28648606

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GTF3C5--SLC35E3

0.33

0.0

INCL_NON_REF_SPLICE

GTF3C5^ENSG00000148308.18

chr9:133031164:+

SLC35E3^ENSG00000175782.11

chr12:68783910:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1439:17277:13163

NO_LDAS

0.0011

1.8323

1.8892

"[""INTERCHROMOSOMAL[chr9--chr12]""]"

chr9:133031164-chr12:68783910

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

GTF3C3--HECTD1

1.0

0.0

ONLY_REF_SPLICE

GTF3C3^ENSG00000119041.11

chr2:196776010:-

HECTD1^ENSG00000092148.13

chr14:31133675:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1363:18879:8202

YES_LDAS

0.0034

1.9656

1.9899

"[""INTERCHROMOSOMAL[chr2--chr14]""]"

chr2:196776010-chr14:31133675

False

Read

count

too

low:

FAIL

GTF3AP5--WDR1

1.0

0.0

INCL_NON_REF_SPLICE

GTF3AP5^ENSG00000225816.1

chr7:14985840:-

WDR1^ENSG00000071127.17

chr4:10097728:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1160:1906:29109

NO_LDAS

0.0034

1.5656

1.7819

"[""INTERCHROMOSOMAL[chr7--chr4]""]"

chr7:14985840-chr4:10097728

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GTF2A2--TRAF4

1.0

0.0

INCL_NON_REF_SPLICE

GTF2A2^ENSG00000140307.11

chr15:59657155:-

TRAF4^ENSG00000076604.15

chr17:28744248:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2438:20003:4069

NO_LDAS

0.0034

1.8256

"[""INTERCHROMOSOMAL[chr15--chr17]""]"

chr15:59657155-chr17:28744248

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GSK3A--PRG2

1.0

0.0

INCL_NON_REF_SPLICE

GSK3A^ENSG00000105723.13

chr19:42242276:-

PRG2^ENSG00000186652.10

chr11:57388625:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1413:35925:28142

NO_LDAS

0.0034

1.6895

1.7819

"[""INTERCHROMOSOMAL[chr19--chr11]""]"

chr19:42242276-chr11:57388625

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GRTP1--MOB4

0.33

0.0

ONLY_REF_SPLICE

GRTP1^ENSG00000139835.14

chr13:113344863:-

MOB4^ENSG00000115540.15

chr2:197535530:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1480:22633:24653

YES_LDAS

0.0011

1.8295

1.7465

"[""INTERCHROMOSOMAL[chr13--chr2]""]"

chr13:113344863-chr2:197535530

False

Read

count

too

low:

FAIL

GRK6--KIF22

1.0

0.0

INCL_NON_REF_SPLICE

GRK6^ENSG00000198055.11

chr5:177436139:+

KIF22^ENSG00000079616.13

chr16:29802787:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1108:42097:14396

YES_LDAS

0.0034

1.5301

1.7819

"[""INTERCHROMOSOMAL[chr5--chr16]""]"

chr5:177436139-chr16:29802787

False

Read

count

too

low:

FAIL

GRK5--SORBS1

1.0

0.0

ONLY_REF_SPLICE

GRK5^ENSG00000198873.12

chr10:119207969:+

SORBS1^ENSG00000095637.22

chr10:95491120:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2498:46579:23364

YES_LDAS

0.0034

1.7056

1.8892

"[""INTRACHROMOSOMAL[chr10:23.65Mb]""]"

chr10:119207969-chr10:95491120

False

Read

count

too

low:

FAIL

GRHPR--PISD

1.0

0.0

INCL_NON_REF_SPLICE

GRHPR^ENSG00000137106.18

chr9:37426646:+

PISD^ENSG00000241878.11

chr22:31621433:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2101:32858:10052

NO_LDAS

0.0034

1.7819

"[""INTERCHROMOSOMAL[chr9--chr22]""]"

chr9:37426646-chr22:31621433

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

GPSM3--ZDHHC24

0.5

0.0

INCL_NON_REF_SPLICE

GPSM3^ENSG00000213654.10

chr6:32192148:-

ZDHHC24^ENSG00000174165.8

chr11:66539641:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1456:36005:21192

NO_LDAS

0.0017

1.5301

1.3996

"[""INTERCHROMOSOMAL[chr6--chr11]""]"

chr6:32192148-chr11:66539641

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GPSM3--MAPK8IP1

0.5

0.0

INCL_NON_REF_SPLICE

GPSM3^ENSG00000213654.10

chr6:32192148:-

MAPK8IP1^ENSG00000121653.11

chr11:45896840:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1456:36005:21192

NO_LDAS

0.0017

1.5301

1.5329

"[""INTERCHROMOSOMAL[chr6--chr11]""]"

chr6:32192148-chr11:45896840

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GPRIN2--NPY4R

0.5

0.0

INCL_NON_REF_SPLICE

GPRIN2^ENSG00000204175.5

chr10:46549642:-

NPY4R^ENSG00000204174.8

chr10:46462694:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1233:28587:22074

YES_LDAS

0.0017

1.9899

1.9219

"[""INTRACHROMOSOMAL[chr10:0.08Mb]"",""NEIGHBORS[83086]""]"

chr10:46549642-chr10:46462694

False

Read

count

too

low:

FAIL

GPR35--COL20A1

1.0

0.0

INCL_NON_REF_SPLICE

GPR35^ENSG00000178623.12

chr2:240625652:+

COL20A1^ENSG00000101203.16

chr20:63331463:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1169:8645:25788

NO_LDAS

0.0034

1.6402

1.8892

"[""INTERCHROMOSOMAL[chr2--chr20]""]"

chr2:240625652-chr20:63331463

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GPR157--PHF13

1.0

0.0

INCL_NON_REF_SPLICE

GPR157^ENSG00000180758.12

chr1:9129002:-

PHF13^ENSG00000116273.6

chr1:6614043:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2174:31499:13247

NO_LDAS

0.0034

1.2419

0.7219

"[""INTRACHROMOSOMAL[chr1:2.48Mb]""]"

chr1:9129002-chr1:6614043

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GPR141--NME8

1.0

0.0

ONLY_REF_SPLICE

GPR141^ENSG00000187037.8

chr7:37685583:+

NME8^ENSG00000086288.12

chr7:37857274:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2468:49136:16077

YES_LDAS

0.0034

1.9656

1.8062

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.01Mb]"",""NEIGHBORS[14809]""]"

chr7:37685583-chr7:37857274

True

pair|recurrent

breakpoints

Blacklisted

FAIL

GPKOW--LINC00970

0.5

0.0

INCL_NON_REF_SPLICE

GPKOW^ENSG00000068394.11

chrX:49122679:-

LINC00970^ENSG00000203601.3

chr1:168904578:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2235:24647:24695

NO_LDAS

0.0017

1.8892

1.7968

"[""INTERCHROMOSOMAL[chrX--chr1]""]"

chrX:49122679-chr1:168904578

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GPC1--ARHGEF9

1.0

0.0

INCL_NON_REF_SPLICE

GPC1^ENSG00000063660.9

chr2:240466280:+

ARHGEF9^ENSG00000131089.17

chrX:63657022:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2122:20570:13345

NO_LDAS

0.0034

1.7819

1.5329

"[""INTERCHROMOSOMAL[chr2--chrX]""]"

chr2:240466280-chrX:63657022

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GPA33--ALDH9A1

1.0

0.0

ONLY_REF_SPLICE

GPA33^ENSG00000143167.12

chr1:167063582:-

ALDH9A1^ENSG00000143149.12

chr1:165695397:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1228:26621:28114

NO_LDAS

0.0034

1.6402

1.9656

"[""INTRACHROMOSOMAL[chr1:1.35Mb]""]"

chr1:167063582-chr1:165695397

False

Read

count

too

low:

FAIL

GORASP2--LMOD1

1.0

0.0

INCL_NON_REF_SPLICE

GORASP2^ENSG00000115806.13

chr2:170966120:+

LMOD1^ENSG00000163431.13

chr1:201900088:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2263:26508:13345

NO_LDAS

0.0034

1.9656

1.4716

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:170966120-chr1:201900088

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GOLGA4--SATB2

1.0

0.0

ONLY_REF_SPLICE

GOLGA4^ENSG00000144674.16

chr3:37302332:+

SATB2^ENSG00000119042.17

chr2:199272672:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1237:25658:28240

YES_LDAS

0.0034

1.9086

1.9656

"[""INTERCHROMOSOMAL[chr3--chr2]""]"

chr3:37302332-chr2:199272672

False

Read

count

too

low:

FAIL

GOLGA2P7--CBX6

1.0

0.0

INCL_NON_REF_SPLICE

GOLGA2P7^ENSG00000225151.10

chr15:84201825:-

CBX6^ENSG00000183741.12

chr22:38866364:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1206:9001:29599

YES_LDAS

0.0034

1.8892

1.7968

"[""INTERCHROMOSOMAL[chr15--chr22]""]"

chr15:84201825-chr22:38866364

False

Read

count

too

low:

FAIL

GOLGA2P6--LTBR

1.0

0.0

INCL_NON_REF_SPLICE

GOLGA2P6^ENSG00000241621.1

chr10:30370708:-

LTBR^ENSG00000111321.11

chr12:6384257:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2281:28312:22467

NO_LDAS

0.0034

1.5301

1.5058

"[""INTERCHROMOSOMAL[chr10--chr12]""]"

chr10:30370708-chr12:6384257

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GNPTG--JPT2

1.0

0.0

ONLY_REF_SPLICE

GNPTG^ENSG00000090581.10

chr16:1352306:+

JPT2^ENSG00000206053.13

chr16:1685439:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2274:4131:16231

YES_LDAS

0.0034

1.7819

1.7465

"[""INTRACHROMOSOMAL[chr16:0.31Mb]""]"

chr16:1352306-chr16:1685439

False

Read

count

too

low:

FAIL

GNPAT--GON4L

1.0

0.0

ONLY_REF_SPLICE

GNPAT^ENSG00000116906.13

chr1:231241456:+

GON4L^ENSG00000116580.19

chr1:155827028:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1257:26128:17282

YES_LDAS

0.0034

1.7819

1.8295

"[""INTRACHROMOSOMAL[chr1:75.38Mb]""]"

chr1:231241456-chr1:155827028

False

Read

count

too

low:

FAIL

GNG10--UGCG

1.0

0.0

ONLY_REF_SPLICE

GNG10^ENSG00000242616.4

chr9:111666946:+

UGCG^ENSG00000148154.10

chr9:111914605:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1389:29857:18361

YES_LDAS

0.0034

1.9329

1.7819

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.23Mb]""]"

chr9:111666946-chr9:111914605

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

GNB5--SYT7

1.0

0.0

INCL_NON_REF_SPLICE

GNB5^ENSG00000069966.19

chr15:52135729:-

SYT7^ENSG00000011347.10

chr11:61546229:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2358:36539:19931

YES_LDAS

0.0034

1.8892

1.2729

"[""INTERCHROMOSOMAL[chr15--chr11]""]"

chr15:52135729-chr11:61546229

False

Read

count

too

low:

FAIL

GNAS-AS1--CLSTN2

1.0

0.0

ONLY_REF_SPLICE

GNAS-AS1^ENSG00000235590.7

chr20:58850530:-

CLSTN2^ENSG00000158258.16

chr3:140448519:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2241:13798:10837

YES_LDAS

0.0034

1.9086

1.7819

"[""INTERCHROMOSOMAL[chr20--chr3]""]"

chr20:58850530-chr3:140448519

False

Read

count

too

low:

FAIL

GNAI3--AC126323.1

0.5

0.0

INCL_NON_REF_SPLICE

GNAI3^ENSG00000065135.12

chr1:109548838:+

AC126323.1^ENSG00000166104.15

chr15:62246572:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2271:20821:18740

NO_LDAS

0.0017

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr1--chr15]""]"

chr1:109548838-chr15:62246572

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

GNAI3--AC126323.1

0.5

0.0

INCL_NON_REF_SPLICE

GNAI3^ENSG00000065135.12

chr1:109548838:+

AC126323.1^ENSG00000166104.15

chr15:62246254:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2271:20821:18740

NO_LDAS

0.0017

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr1--chr15]""]"

chr1:109548838-chr15:62246254

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

GNAI2--GNAT2

1.0

0.0

ONLY_REF_SPLICE

GNAI2^ENSG00000114353.17

chr3:50236453:+

GNAT2^ENSG00000134183.13

chr1:109610507:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1222:47687:7404

YES_LDAS

0.0034

1.7056

1.7232

"[""INTERCHROMOSOMAL[chr3--chr1]""]"

chr3:50236453-chr1:109610507

True

pair|recurrent

breakpoints

Blacklisted

FAIL

GNAI1--WWC2

1.0

0.0

INCL_NON_REF_SPLICE

GNAI1^ENSG00000127955.17

chr7:80135259:+

WWC2^ENSG00000151718.16

chr4:183099330:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1120:28959:16442

YES_LDAS

0.0034

1.4566

1.6402

"[""INTERCHROMOSOMAL[chr7--chr4]""]"

chr7:80135259-chr4:183099330

False

Read

count

too

low:

FAIL

GMEB2--NDUFA6

1.0

0.0

ONLY_REF_SPLICE

GMEB2^ENSG00000101216.11

chr20:63619267:-

NDUFA6^ENSG00000184983.11

chr22:42087175:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2495:5684:17184

YES_LDAS

0.0034

1.7465

1.8892

"[""INTERCHROMOSOMAL[chr20--chr22]""]"

chr20:63619267-chr22:42087175

False

Read

count

too

low:

FAIL

GMEB1--TM9SF4

1.0

0.0

INCL_NON_REF_SPLICE

GMEB1^ENSG00000162419.13

chr1:28717996:+

TM9SF4^ENSG00000101337.16

chr20:32150656:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2197:27527:6535

YES_LDAS

0.0034

1.2419

1.9086

"[""INTERCHROMOSOMAL[chr1--chr20]""]"

chr1:28717996-chr20:32150656

False

Read

count

too

low:

FAIL

GMDS--ASH1L

1.0

0.0

ONLY_REF_SPLICE

GMDS^ENSG00000112699.11

chr6:2245321:-

ASH1L^ENSG00000116539.14

chr1:155521618:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1102:22139:14410

YES_LDAS

0.0034

1.9329

1.8256

"[""INTERCHROMOSOMAL[chr6--chr1]""]"

chr6:2245321-chr1:155521618

False

Read

count

too

low:

FAIL

GLUL--KCTD18

1.0

0.0

INCL_NON_REF_SPLICE

GLUL^ENSG00000135821.19

chr1:182390192:-

KCTD18^ENSG00000155729.13

chr2:200495998:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2129:21225:8847

YES_LDAS

0.0034

1.9656

"[""INTERCHROMOSOMAL[chr1--chr2]""]"

chr1:182390192-chr2:200495998

False

Read

count

too

low:

FAIL

GLOD4--PRAP1

1.0

0.0

INCL_NON_REF_SPLICE

GLOD4^ENSG00000167699.13

chr17:770202:-

PRAP1^ENSG00000165828.15

chr10:133352296:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2326:38295:18964

NO_LDAS

0.0034

1.8892

1.6729

"[""INTERCHROMOSOMAL[chr17--chr10]""]"

chr17:770202-chr10:133352296

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GLI4--ZFP41

1.0

0.0

INCL_NON_REF_SPLICE

GLI4^ENSG00000250571.7

chr8:143275352:+

ZFP41^ENSG00000181638.20

chr8:143250748:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1451:41531:16105

YES_LDAS

0.0034

1.4256

1.9899

"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr8:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[4728]""]"

chr8:143275352-chr8:143250748

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

GLE1--TAOK3

1.0

0.0

ONLY_REF_SPLICE

GLE1^ENSG00000119392.15

chr9:128515639:+

TAOK3^ENSG00000135090.14

chr12:118214110:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2373:49038:14144

YES_LDAS

0.0034

1.4716

1.5656

"[""INTERCHROMOSOMAL[chr9--chr12]""]"

chr9:128515639-chr12:118214110

False

Read

count

too

low:

FAIL

GLB1L2--AL024507.2

1.0

0.0

INCL_NON_REF_SPLICE

GLB1L2^ENSG00000149328.15

chr11:134360938:+

AL024507.2^ENSG00000272476.1

chr6:107958729:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1386:23142:7376

YES_LDAS

0.0034

1.8295

1.9656

"[""INTERCHROMOSOMAL[chr11--chr6]""]"

chr11:134360938-chr6:107958729

False

Read

count

too

low:

FAIL

GJA1P1--TARDBP

1.0

0.0

INCL_NON_REF_SPLICE

GJA1P1^ENSG00000176857.5

chr5:109052454:-

TARDBP^ENSG00000120948.19

chr1:11022490:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1256:7537:8006

NO_LDAS

0.0034

1.8062

1.5656

"[""INTERCHROMOSOMAL[chr5--chr1]""]"

chr5:109052454-chr1:11022490

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GIPR--ZNF56

0.5

0.0

ONLY_REF_SPLICE

GIPR^ENSG00000010310.9

chr19:45678226:+

ZNF56^ENSG00000267419.2

chr19:19806281:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1130:27608:14242

NO_LDAS

0.0017

1.7968

1.7232

"[""INTRACHROMOSOMAL[chr19:25.83Mb]""]"

chr19:45678226-chr19:19806281

False

Read

count

too

low:

FAIL

GIPR--NUP85

0.5

0.0

ONLY_REF_SPLICE

GIPR^ENSG00000010310.9

chr19:45678226:+

NUP85^ENSG00000125450.11

chr17:75216290:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1130:27608:14242

NO_LDAS

0.0017

1.7968

1.7232

"[""INTERCHROMOSOMAL[chr19--chr17]""]"

chr19:45678226-chr17:75216290

False

Read

count

too

low:

FAIL

GINM1--CD164

1.0

0.0

ONLY_REF_SPLICE

GINM1^ENSG00000055211.14

chr6:149566534:+

CD164^ENSG00000135535.17

chr6:109377971:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1159:26030:13331

YES_LDAS

0.0034

1.7465

1.8062

"[""INTRACHROMOSOMAL[chr6:40.18Mb]""]"

chr6:149566534-chr6:109377971

False

Read

count

too

low:

FAIL

GIHCG--GMDS

1.0

0.0

INCL_NON_REF_SPLICE

GIHCG^ENSG00000257698.2

chr12:57935645:-

GMDS^ENSG00000112699.11

chr6:1726512:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2334:9891:7880

NO_LDAS

0.0034

1.8892

1.2867

"[""INTERCHROMOSOMAL[chr12--chr6]""]"

chr12:57935645-chr6:1726512

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GHDC--UBOX5

1.0

0.0

INCL_NON_REF_SPLICE

GHDC^ENSG00000167925.16

chr17:42194148:-

UBOX5^ENSG00000185019.17

chr20:3108898:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1480:20610:23560

NO_LDAS

0.0034

1.8892

1.9219

"[""INTERCHROMOSOMAL[chr17--chr20]""]"

chr17:42194148-chr20:3108898

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GGT7--SNX27

0.33

0.0

INCL_NON_REF_SPLICE

GGT7^ENSG00000131067.17

chr20:34845116:-

SNX27^ENSG00000143376.14

chr1:151639114:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2252:16201:7460

NO_LDAS

0.0011

0.9183

1.5628

"[""INTERCHROMOSOMAL[chr20--chr1]""]"

chr20:34845116-chr1:151639114

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GGT7--CAND2

0.33

0.0

INCL_NON_REF_SPLICE

GGT7^ENSG00000131067.17

chr20:34845112:-

CAND2^ENSG00000144712.12

chr3:12803630:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2252:16201:7460

NO_LDAS

0.0011

1.231

1.8892

"[""INTERCHROMOSOMAL[chr20--chr3]""]"

chr20:34845112-chr3:12803630

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GGCT--MPP1

1.0

0.0

ONLY_REF_SPLICE

GGCT^ENSG00000006625.18

chr7:30504569:-

MPP1^ENSG00000130830.15

chrX:154785157:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2253:41579:17759

YES_LDAS

0.0034

1.7056

1.8892

"[""INTERCHROMOSOMAL[chr7--chrX]""]"

chr7:30504569-chrX:154785157

False

Read

count

too

low:

FAIL

GFOD2--ENKD1

1.0

0.0

INCL_NON_REF_SPLICE

GFOD2^ENSG00000141098.13

chr16:67685457:-

ENKD1^ENSG00000124074.12

chr16:67667093:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1110:34088:6941

NO_LDAS

0.0034

1.9656

"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[7266]""]"

chr16:67685457-chr16:67667093

True

pair|recurrent

breakpoints

Blacklisted

FAIL

GDAP1--MIR2052HG

1.0

0.0

ONLY_REF_SPLICE

GDAP1^ENSG00000104381.14

chr8:74363053:+

MIR2052HG^ENSG00000254349.6

chr8:74612853:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2171:27446:11411

YES_LDAS

0.0034

1.7465

1.9219

"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.08Mb]"",""NEIGHBORS[81768]""]"

chr8:74363053-chr8:74612853

True

pair|recurrent

breakpoints

Blacklisted

FAIL

GCNT3--STUB1P1

1.0

0.0

INCL_NON_REF_SPLICE

GCNT3^ENSG00000140297.13

chr15:59619290:+

STUB1P1^ENSG00000226273.2

chr2:177178022:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2472:21136:23013

NO_LDAS

0.0034

1.231

1.7056

"[""INTERCHROMOSOMAL[chr15--chr2]""]"

chr15:59619290-chr2:177178022

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GCLC--SCMH1

1.0

0.0

ONLY_REF_SPLICE

GCLC^ENSG00000001084.13

chr6:53544496:-

SCMH1^ENSG00000010803.16

chr1:41163017:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1259:15570:12448

YES_LDAS

0.0034

1.6402

1.7819

"[""INTERCHROMOSOMAL[chr6--chr1]""]"

chr6:53544496-chr1:41163017

False

Read

count

too

low:

FAIL

GAS8--SDHAF3

1.0

0.0

INCL_NON_REF_SPLICE

GAS8^ENSG00000141013.17

chr16:90035666:+

SDHAF3^ENSG00000196636.8

chr7:97117826:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1325:4713:19202

NO_LDAS

0.0034

1.8892

1.8062

"[""INTERCHROMOSOMAL[chr16--chr7]""]"

chr16:90035666-chr7:97117826

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GAS8--AL049796.1

0.5

0.0

INCL_NON_REF_SPLICE

GAS8^ENSG00000141013.17

chr16:90022602:+

AL049796.1^ENSG00000260464.1

chr1:93847620:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1181:1380:15615

NO_LDAS

0.0017

1.5628

1.9899

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:90022602-chr1:93847620

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GAS7--KRIT1

1.0

0.0

ONLY_REF_SPLICE

GAS7^ENSG00000007237.19

chr17:10198208:-

KRIT1^ENSG00000001631.16

chr7:92226682:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1421:46393:20996

YES_LDAS

0.0034

1.7968

1.5656

"[""INTERCHROMOSOMAL[chr17--chr7]""]"

chr17:10198208-chr7:92226682

False

Read

count

too

low:

FAIL

GAS2L1--GAS2L1P1

1.0

0.0

INCL_NON_REF_SPLICE

GAS2L1^ENSG00000185340.15

chr22:29310998:+

GAS2L1P1^ENSG00000229511.1

chr9:38487831:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2180:47817:25143

NO_LDAS

0.0034

1.4566

1.9086

"[""INTERCHROMOSOMAL[chr22--chr9]""]"

chr22:29310998-chr9:38487831

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GANAB--SEC14L2

1.0

0.0

INCL_NON_REF_SPLICE

GANAB^ENSG00000089597.18

chr11:62629817:-

SEC14L2^ENSG00000100003.18

chr22:30424980:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1121:5862:17857

NO_LDAS

0.0034

1.8295

1.9656

"[""INTERCHROMOSOMAL[chr11--chr22]""]"

chr11:62629817-chr22:30424980

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GANAB--BIRC3

1.0

0.0

INCL_NON_REF_SPLICE

GANAB^ENSG00000089597.18

chr11:62633441:-

BIRC3^ENSG00000023445.16

chr11:102338251:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1136:2586:5176

NO_LDAS

0.0034

1.7819

1.8323

"[""INTRACHROMOSOMAL[chr11:39.67Mb]""]"

chr11:62633441-chr11:102338251

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GALNT6--TMPRSS9

1.0

0.0

INCL_NON_REF_SPLICE

GALNT6^ENSG00000139629.16

chr12:51377319:-

TMPRSS9^ENSG00000178297.14

chr19:2422066:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2436:48068:15909

NO_LDAS

0.0034

1.6729

1.5301

"[""INTERCHROMOSOMAL[chr12--chr19]""]"

chr12:51377319-chr19:2422066

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GALNT2--CSNK1G2

1.0

0.0

INCL_NON_REF_SPLICE

GALNT2^ENSG00000143641.10

chr1:230279395:+

CSNK1G2^ENSG00000133275.16

chr19:1941300:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2137:32624:16203

NO_LDAS

0.0034

1.7465

1.4295

"[""INTERCHROMOSOMAL[chr1--chr19]""]"

chr1:230279395-chr19:1941300

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

GABRA2--COX7B2

1.0

0.0

ONLY_REF_SPLICE

GABRA2^ENSG00000151834.16

chr4:46312496:-

COX7B2^ENSG00000170516.17

chr4:46735241:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2307:45066:10346

YES_LDAS

0.0034

1.9899

1.8256

"[""INTRACHROMOSOMAL[chr4:0.26Mb]""]"

chr4:46312496-chr4:46735241

False

Read

count

too

low:

FAIL

FZD4--AP001528.1

1.0

0.0

ONLY_REF_SPLICE

FZD4^ENSG00000174804.4

chr11:86954801:-

AP001528.1^ENSG00000255471.1

chr11:86922098:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1130:23887:23994

YES_LDAS

0.0034

1.8892

1.9329

"[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[20642]""]"

chr11:86954801-chr11:86922098

True

pair|recurrent

breakpoints

Blacklisted

FAIL

FXYD6--FXYD2

1.0

0.0

ONLY_REF_SPLICE

FXYD6^ENSG00000137726.17

chr11:117839781:-

FXYD2^ENSG00000137731.14

chr11:117822717:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1386:16500:24148

YES_LDAS

0.0034

1.8892

1.5219

"[""ConjoinG"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[8278]""]"

chr11:117839781-chr11:117822717

True

pair|recurrent

breakpoints

Blacklisted

FAIL

FUT8--ZC3H12C

1.0

0.0

ONLY_REF_SPLICE

FUT8^ENSG00000033170.17

chr14:65561766:+

ZC3H12C^ENSG00000149289.11

chr11:110136663:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2111:50422:1855

YES_LDAS

0.0034

1.8892

"[""INTERCHROMOSOMAL[chr14--chr11]""]"

chr14:65561766-chr11:110136663

False

Read

count

too

low:

FAIL

FUT10--COPS2

1.0

0.0

INCL_NON_REF_SPLICE

FUT10^ENSG00000172728.16

chr8:33461372:-

COPS2^ENSG00000166200.15

chr15:49124363:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1103:48035:14788

NO_LDAS

0.0034

1.8892

1.6895

"[""INTERCHROMOSOMAL[chr8--chr15]""]"

chr8:33461372-chr15:49124363

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FSTL1--UBE2O

1.0

0.0

INCL_NON_REF_SPLICE

FSTL1^ENSG00000163430.12

chr3:120396126:-

UBE2O^ENSG00000175931.13

chr17:76453148:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1389:39169:9856

NO_LDAS

0.0034

1.8062

1.8892

"[""INTERCHROMOSOMAL[chr3--chr17]""]"

chr3:120396126-chr17:76453148

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FSCN1--NARF

1.0

0.0

ONLY_REF_SPLICE

FSCN1^ENSG00000075618.18

chr7:5604030:+

NARF^ENSG00000141562.18

chr17:82464287:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1468:49176:10318

YES_LDAS

0.0034

1.6895

1.8892

"[""INTERCHROMOSOMAL[chr7--chr17]""]"

chr7:5604030-chr17:82464287

False

Read

count

too

low:

FAIL

FRMD3--RASEF

1.0

0.0

ONLY_REF_SPLICE

FRMD3^ENSG00000172159.16

chr9:83538085:-

RASEF^ENSG00000165105.10

chr9:83025921:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2135:3985:15391

YES_LDAS

0.0034

1.8295

1.6895

"[""INTRACHROMOSOMAL[chr9:0.18Mb]""]"

chr9:83538085-chr9:83025921

False

Read

count

too

low:

FAIL

FOXP1--ING5

1.0

0.0

INCL_NON_REF_SPLICE

FOXP1^ENSG00000114861.23

chr3:70979007:-

ING5^ENSG00000168395.16

chr2:241704653:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2420:50559:24933

NO_LDAS

0.0034

1.8892

1.9899

"[""INTERCHROMOSOMAL[chr3--chr2]""]"

chr3:70979007-chr2:241704653

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FOXO1--LINC00598

1.0

0.0

ONLY_REF_SPLICE

FOXO1^ENSG00000150907.10

chr13:40665583:-

LINC00598^ENSG00000215483.11

chr13:40350302:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1252:18482:8889

YES_LDAS

0.0034

1.7232

1.9656

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]"

chr13:40665583-chr13:40350302

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

FOXO1--LINC00598

1.0

0.0

ONLY_REF_SPLICE

FOXO1^ENSG00000150907.10

chr13:40665583:-

LINC00598^ENSG00000215483.11

chr13:40097967:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1274:8224:3788

YES_LDAS

0.0034

1.7232

1.9656

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]"

chr13:40665583-chr13:40097967

True

pair|recurrent

breakpoints

Blacklisted

FAIL

FOXH1--PTCD1

1.0

0.0

INCL_NON_REF_SPLICE

FOXH1^ENSG00000160973.8

chr8:144473290:-

PTCD1^ENSG00000106246.18

chr7:99423844:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1479:32972:17843

NO_LDAS

0.0034

1.4256

1.8892

"[""INTERCHROMOSOMAL[chr8--chr7]""]"

chr8:144473290-chr7:99423844

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FOXF1--OVOL2

0.33

0.0

INCL_NON_REF_SPLICE

FOXF1^ENSG00000103241.7

chr16:86510633:+

OVOL2^ENSG00000125850.11

chr20:18024759:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2302:42477:6535

NO_LDAS

0.0011

1.053

1.8323

"[""INTERCHROMOSOMAL[chr16--chr20]""]"

chr16:86510633-chr20:18024759

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FOXC1--OVOL2

0.33

0.0

INCL_NON_REF_SPLICE

FOXC1^ENSG00000054598.9

chr6:1611811:+

OVOL2^ENSG00000125850.11

chr20:18024759:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2302:42477:6535

NO_LDAS

0.0011

1.053

1.8323

"[""INTERCHROMOSOMAL[chr6--chr20]""]"

chr6:1611811-chr20:18024759

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FMN1--TMEM134

0.5

0.0

INCL_NON_REF_SPLICE

FMN1^ENSG00000248905.10

chr15:33066511:-

TMEM134^ENSG00000172663.9

chr11:67464305:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1344:21023:23266

NO_LDAS

0.0017

1.9086

1.5546

"[""INTERCHROMOSOMAL[chr15--chr11]""]"

chr15:33066511-chr11:67464305

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FMN1--HES6

0.5

0.0

INCL_NON_REF_SPLICE

FMN1^ENSG00000248905.10

chr15:33066511:-

HES6^ENSG00000144485.11

chr2:238238872:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1344:21023:23266

NO_LDAS

0.0017

1.9086

1.6402

"[""INTERCHROMOSOMAL[chr15--chr2]""]"

chr15:33066511-chr2:238238872

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FMN1--BSDC1

0.33

0.0

INCL_NON_REF_SPLICE

FMN1^ENSG00000248905.10

chr15:32771089:-

BSDC1^ENSG00000160058.19

chr1:32366861:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1418:11193:29165

NO_LDAS

0.0011

1.3753

1.7465

"[""INTERCHROMOSOMAL[chr15--chr1]""]"

chr15:32771089-chr1:32366861

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FMC1--OVOL2

1.0

0.0

ONLY_REF_SPLICE

FMC1^ENSG00000164898.13

chr7:139341522:+

OVOL2^ENSG00000125850.11

chr20:17957037:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1434:44362:14284

YES_LDAS

0.0034

1.9329

1.9219

"[""INTERCHROMOSOMAL[chr7--chr20]""]"

chr7:139341522-chr20:17957037

False

Read

count

too

low:

FAIL

FLT1--DPYSL2

1.0

0.0

ONLY_REF_SPLICE

FLT1^ENSG00000102755.12

chr13:28494780:-

DPYSL2^ENSG00000092964.18

chr8:26581969:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1442:3314:1589

YES_LDAS

0.0034

1.9086

1.9329

"[""INTERCHROMOSOMAL[chr13--chr8]""]"

chr13:28494780-chr8:26581969

False

Read

count

too

low:

FAIL

FKBP14--MRPL1

1.0

0.0

ONLY_REF_SPLICE

FKBP14^ENSG00000106080.11

chr7:30022665:-

MRPL1^ENSG00000169288.18

chr4:77909266:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1402:43003:19468

NO_LDAS

0.0034

0.9183

1.9329

"[""INTERCHROMOSOMAL[chr7--chr4]""]"

chr7:30022665-chr4:77909266

False

Read

count

too

low:

FAIL

FIG4--AK9

1.0

0.0

ONLY_REF_SPLICE

FIG4^ENSG00000112367.12

chr6:109691501:+

AK9^ENSG00000155085.15

chr6:109614480:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1397:10344:23742

YES_LDAS

0.0034

1.9329

1.8892

"[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[608]""]"

chr6:109691501-chr6:109614480

False

Read

count

too

low:

FAIL

FGFR4--LINC01951

1.0

0.0

INCL_NON_REF_SPLICE

FGFR4^ENSG00000160867.15

chr5:177090653:+

LINC01951^ENSG00000204754.3

chr5:174994946:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2192:1380:28842

NO_LDAS

0.0034

1.9656

1.6402

"[""INTRACHROMOSOMAL[chr5:2.09Mb]""]"

chr5:177090653-chr5:174994946

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FGF13--TMEM164

1.0

0.0

ONLY_REF_SPLICE

FGF13^ENSG00000129682.16

chrX:139204059:-

TMEM164^ENSG00000157600.12

chrX:110109080:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1208:27503:14087

NO_LDAS

0.0034

1.9329

1.9656

"[""INTRACHROMOSOMAL[chrX:28.43Mb]""]"

chrX:139204059-chrX:110109080

False

Read

count

too

low:

FAIL

FGD4--TRIP12

1.0

0.0

ONLY_REF_SPLICE

FGD4^ENSG00000139132.15

chr12:32399959:+

TRIP12^ENSG00000153827.14

chr2:229880128:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1183:38376:12322

YES_LDAS

0.0034

1.8062

1.7819

"[""INTERCHROMOSOMAL[chr12--chr2]""]"

chr12:32399959-chr2:229880128

False

Read

count

too

low:

FAIL

FGD2--SLC26A11

0.5

0.0

INCL_NON_REF_SPLICE

FGD2^ENSG00000146192.15

chr6:37011054:+

SLC26A11^ENSG00000181045.15

chr17:80245262:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1116:14882:6016

NO_LDAS

0.0017

1.9329

1.7465

"[""INTERCHROMOSOMAL[chr6--chr17]""]"

chr6:37011054-chr17:80245262

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FCF1--ANKRD36BP2

1.0

0.0

INCL_NON_REF_SPLICE

FCF1^ENSG00000119616.11

chr14:74713594:+

ANKRD36BP2^ENSG00000230006.7

chr2:88802127:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1173:51085:16428

NO_LDAS

0.0034

1.6895

1.9329

"[""INTERCHROMOSOMAL[chr14--chr2]""]"

chr14:74713594-chr2:88802127

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FBXW2--CNST

1.0

0.0

ONLY_REF_SPLICE

FBXW2^ENSG00000119402.17

chr9:120793149:-

CNST^ENSG00000162852.14

chr1:246647139:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1478:33198:14956

YES_LDAS

0.0034

1.6895

1.8892

"[""INTERCHROMOSOMAL[chr9--chr1]""]"

chr9:120793149-chr1:246647139

False

Read

count

too

low:

FAIL

FBXO34--TUBGCP3

1.0

0.0

ONLY_REF_SPLICE

FBXO34^ENSG00000178974.11

chr14:55271537:+

TUBGCP3^ENSG00000126216.15

chr13:112569259:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1143:7448:4994

NO_LDAS

0.0034

1.371

1.9656

"[""INTERCHROMOSOMAL[chr14--chr13]""]"

chr14:55271537-chr13:112569259

False

Read

count

too

low:

FAIL

FBXO32--CASC15

1.0

0.0

ONLY_REF_SPLICE

FBXO32^ENSG00000156804.7

chr8:123531898:-

CASC15^ENSG00000272168.8

chr6:22191567:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1414:8880:21290

YES_LDAS

0.0034

1.9656

"[""INTERCHROMOSOMAL[chr8--chr6]""]"

chr8:123531898-chr6:22191567

False

Read

count

too

low:

FAIL

FBXO17--PRELID2

1.0

0.0

INCL_NON_REF_SPLICE

FBXO17^ENSG00000269190.6

chr19:38942350:-

PRELID2^ENSG00000186314.11

chr5:145759225:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2109:46288:28296

NO_LDAS

0.0034

1.8062

1.9656

"[""INTERCHROMOSOMAL[chr19--chr5]""]"

chr19:38942350-chr5:145759225

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FBXL4--LINC01005

1.0

0.0

INCL_NON_REF_SPLICE

FBXL4^ENSG00000112234.9

chr6:98880561:-

LINC01005^ENSG00000228564.2

chr7:64026762:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1406:27713:7670

NO_LDAS

0.0034

1.8892

1.6402

"[""INTERCHROMOSOMAL[chr6--chr7]""]"

chr6:98880561-chr7:64026762

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FBXL12--RPL15

1.0

0.0

INCL_NON_REF_SPLICE

FBXL12^ENSG00000127452.9

chr19:9818465:-

RPL15^ENSG00000174748.22

chr3:23917439:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1268:4293:1715

YES_LDAS

0.0034

1.8295

1.9656

"[""INTERCHROMOSOMAL[chr19--chr3]""]"

chr19:9818465-chr3:23917439

False

Read

count

too

low:

FAIL

FANCI--RNPEP

1.0

0.0

ONLY_REF_SPLICE

FANCI^ENSG00000140525.19

chr15:89258776:+

RNPEP^ENSG00000176393.11

chr1:201996147:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1377:15651:13961

YES_LDAS

0.0034

1.9656

1.5546

"[""INTERCHROMOSOMAL[chr15--chr1]""]"

chr15:89258776-chr1:201996147

False

Read

count

too

low:

FAIL

FAM76A--METTL16

1.0

0.0

INCL_NON_REF_SPLICE

FAM76A^ENSG00000009780.16

chr1:27761949:+

METTL16^ENSG00000127804.13

chr17:2459993:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2437:34703:17619

YES_LDAS

0.0034

1.8892

1.2419

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:27761949-chr17:2459993

False

Read

count

too

low:

FAIL

FAM214A--TJP1

1.0

0.0

ONLY_REF_SPLICE

FAM214A^ENSG00000047346.12

chr15:52678006:-

TJP1^ENSG00000104067.17

chr15:29742781:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1107:50899:27679

YES_LDAS

0.0034

1.8256

1.9656

"[""INTRACHROMOSOMAL[chr15:22.61Mb]""]"

chr15:52678006-chr15:29742781

False

Read

count

too

low:

FAIL

FAM178B--WBP1

0.33

0.0

ONLY_REF_SPLICE

FAM178B^ENSG00000168754.15

chr2:96960288:-

WBP1^ENSG00000239779.7

chr2:74459643:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1386:41782:10178

YES_LDAS

0.0011

1.9329

"[""INTRACHROMOSOMAL[chr2:22.41Mb]""]"

chr2:96960288-chr2:74459643

False

Read

count

too

low:

FAIL

FAM177A1--DENND3

1.0

0.0

INCL_NON_REF_SPLICE

FAM177A1^ENSG00000151327.13

chr14:35046628:+

DENND3^ENSG00000105339.11

chr8:141178184:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2154:31944:2527

NO_LDAS

0.0034

1.8892

1.7465

"[""INTERCHROMOSOMAL[chr14--chr8]""]"

chr14:35046628-chr8:141178184

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FAM174B--SLC30A7

1.0

0.0

INCL_NON_REF_SPLICE

FAM174B^ENSG00000185442.13

chr15:92655443:-

SLC30A7^ENSG00000162695.12

chr1:100979367:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1154:40131:4713

NO_LDAS

0.0034

1.6895

1.9656

"[""INTERCHROMOSOMAL[chr15--chr1]""]"

chr15:92655443-chr1:100979367

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FAM174B--MSH6

0.5

0.0

INCL_NON_REF_SPLICE

FAM174B^ENSG00000185442.13

chr15:92655443:-

MSH6^ENSG00000116062.17

chr2:47784075:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1119:30617:25732

NO_LDAS

0.0017

1.6895

1.7968

"[""INTERCHROMOSOMAL[chr15--chr2]""]"

chr15:92655443-chr2:47784075

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FAM174B--CLCN1

0.5

0.0

INCL_NON_REF_SPLICE

FAM174B^ENSG00000185442.13

chr15:92655443:-

CLCN1^ENSG00000188037.13

chr7:143316113:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1119:30617:25732

NO_LDAS

0.0017

1.6895

1.8892

"[""INTERCHROMOSOMAL[chr15--chr7]""]"

chr15:92655443-chr7:143316113

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FAM172A--WRNIP1

1.0

0.0

ONLY_REF_SPLICE

FAM172A^ENSG00000113391.19

chr5:93776159:-

WRNIP1^ENSG00000124535.16

chr6:2783406:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1151:16873:6857

YES_LDAS

0.0034

1.8323

1.9086

"[""INTERCHROMOSOMAL[chr5--chr6]""]"

chr5:93776159-chr6:2783406

False

Read

count

too

low:

FAIL

FAM161A--PLOD1

1.0

0.0

INCL_NON_REF_SPLICE

FAM161A^ENSG00000170264.13

chr2:61846946:-

PLOD1^ENSG00000083444.17

chr1:11972872:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2156:40261:22117

NO_LDAS

0.0034

1.9329

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:61846946-chr1:11972872

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FAM157A--MIGA2

0.33

0.0

ONLY_REF_SPLICE

FAM157A^ENSG00000236438.7

chr3:198210368:+

MIGA2^ENSG00000148343.18

chr9:129048427:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1232:22778:29221

NO_LDAS

0.0011

1.9329

"[""INTERCHROMOSOMAL[chr3--chr9]""]"

chr3:198210368-chr9:129048427

False

Read

count

too

low:

FAIL

FAM155A--RAD52

0.25

0.0

INCL_NON_REF_SPLICE

FAM155A^ENSG00000204442.4

chr13:107867281:-

RAD52^ENSG00000002016.18

chr12:916383:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1272:1930:18978

NO_LDAS

0.0009

1.2366

1.9329

"[""INTERCHROMOSOMAL[chr13--chr12]""]"

chr13:107867281-chr12:916383

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FAM13B--MTR

1.0

0.0

ONLY_REF_SPLICE

FAM13B^ENSG00000031003.10

chr5:137985257:-

MTR^ENSG00000116984.15

chr1:236803428:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2108:6606:28674

NO_LDAS

0.0034

1.6729

1.6402

"[""INTERCHROMOSOMAL[chr5--chr1]""]"

chr5:137985257-chr1:236803428

False

Read

count

too

low:

FAIL

FAM135A--CRTAC1

1.0

0.0

INCL_NON_REF_SPLICE

FAM135A^ENSG00000082269.17

chr6:70524049:+

CRTAC1^ENSG00000095713.14

chr10:97865603:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2270:2335:24723

NO_LDAS

0.0034

1.8323

1.9656

"[""INTERCHROMOSOMAL[chr6--chr10]""]"

chr6:70524049-chr10:97865603

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FAM114A2--MIR99AHG

1.0

0.0

ONLY_REF_SPLICE

FAM114A2^ENSG00000055147.19

chr5:154038857:-

MIR99AHG^ENSG00000215386.13

chr21:16606994:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1216:5061:29585

YES_LDAS

0.0034

1.7232

1.8892

"[""INTERCHROMOSOMAL[chr5--chr21]""]"

chr5:154038857-chr21:16606994

False

Read

count

too

low:

FAIL

FAM111A-DT--SRSF11

1.0

0.0

ONLY_REF_SPLICE

FAM111A-DT^ENSG00000245571.7

chr11:59139957:-

SRSF11^ENSG00000116754.13

chr1:70232268:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2145:28579:3396

YES_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr11--chr1]""]"

chr11:59139957-chr1:70232268

False

Read

count

too

low:

FAIL

FAM111A-DT--SLAIN1

1.0

0.0

INCL_NON_REF_SPLICE

FAM111A-DT^ENSG00000245571.7

chr11:59142658:-

SLAIN1^ENSG00000139737.22

chr13:77698142:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2149:27729:18515

NO_LDAS

0.0034

1.7465

1.585

"[""INTERCHROMOSOMAL[chr11--chr13]""]"

chr11:59142658-chr13:77698142

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FAM104A--ZNF790-AS1

0.17

0.0

INCL_NON_REF_SPLICE

FAM104A^ENSG00000133193.12

chr17:73232160:-

ZNF790-AS1^ENSG00000267254.7

chr19:36829996:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2216:39638:14816

NO_LDAS

0.0006

1.3996

1.8892

"[""INTERCHROMOSOMAL[chr17--chr19]""]"

chr17:73232160-chr19:36829996

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FAM104A--LIPC

0.17

0.0

INCL_NON_REF_SPLICE

FAM104A^ENSG00000133193.12

chr17:73232160:-

LIPC^ENSG00000166035.11

chr15:58565301:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2216:39638:14816

NO_LDAS

0.0006

1.3996

1.9656

"[""INTERCHROMOSOMAL[chr17--chr15]""]"

chr17:73232160-chr15:58565301

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

FAAP20--GLI3

1.0

0.0

ONLY_REF_SPLICE

FAAP20^ENSG00000162585.17

chr1:2193639:-

GLI3^ENSG00000106571.15

chr7:42223295:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2209:9503:5666

NO_LDAS

0.0034

1.8323

"[""INTERCHROMOSOMAL[chr1--chr7]""]"

chr1:2193639-chr7:42223295

False

Read

count

too

low:

FAIL

FAAH--TARS2

1.0

0.0

INCL_NON_REF_SPLICE

FAAH^ENSG00000117480.16

chr1:46412157:+

TARS2^ENSG00000143374.17

chr1:150496561:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1334:36960:24134

NO_LDAS

0.0034

1.9086

"[""INTRACHROMOSOMAL[chr1:104.07Mb]""]"

chr1:46412157-chr1:150496561

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

F8A1--AC004528.2

0.33

0.0

INCL_NON_REF_SPLICE

F8A1^ENSG00000277203.1

chrX:154886797:+

AC004528.2^ENSG00000274177.1

chr19:1010545:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1437:13952:9477

YES_LDAS

0.0011

1.231

1.5058

"[""INTERCHROMOSOMAL[chrX--chr19]""]"

chrX:154886797-chr19:1010545

False

Read

count

too

low:

FAIL

F8--BX571846.1

1.0

0.0

ONLY_REF_SPLICE

F8^ENSG00000185010.15

chrX:154886134:-

BX571846.1^ENSG00000225393.1

chrX:155486583:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1464:49718:22523

NO_LDAS

0.0034

1.8256

1.7465

"[""INTRACHROMOSOMAL[chrX:0.44Mb]""]"

chrX:154886134-chrX:155486583

False

Read

count

too

low:

FAIL

F8--AC234781.1

0.5

0.0

ONLY_REF_SPLICE

F8^ENSG00000185010.15

chrX:154886134:-

AC234781.1^ENSG00000224216.1

chrX:155351957:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2216:30731:2163

YES_LDAS

0.0017

1.8256

1.9086

"[""INTRACHROMOSOMAL[chrX:0.31Mb]""]"

chrX:154886134-chrX:155351957

False

Read

count

too

low:

FAIL

F11R--CCDC180

1.0

0.0

ONLY_REF_SPLICE

F11R^ENSG00000158769.18

chr1:161021010:-

CCDC180^ENSG00000197816.16

chr9:97349111:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1451:45633:27077

NO_LDAS

0.0034

1.7819

"[""INTERCHROMOSOMAL[chr1--chr9]""]"

chr1:161021010-chr9:97349111

False

Read

count

too

low:

FAIL

ETNK1--TRPM7

1.0

0.0

ONLY_REF_SPLICE

ETNK1^ENSG00000139163.16

chr12:22625586:+

TRPM7^ENSG00000092439.16

chr15:50596381:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2380:12601:18459

YES_LDAS

0.0034

1.8892

1.8062

"[""INTERCHROMOSOMAL[chr12--chr15]""]"

chr12:22625586-chr15:50596381

False

Read

count

too

low:

FAIL

ETNK1--MRPS35

1.0

0.0

ONLY_REF_SPLICE

ETNK1^ENSG00000139163.16

chr12:22625586:+

MRPS35^ENSG00000061794.13

chr12:27735447:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1381:25982:20729

YES_LDAS

0.0034

1.8892

1.9656

"[""INTRACHROMOSOMAL[chr12:5.02Mb]""]"

chr12:22625586-chr12:27735447

False

Read

count

too

low:

FAIL

ETFB--ACOT8

1.0

0.0

INCL_NON_REF_SPLICE

ETFB^ENSG00000105379.10

chr19:51366276:-

ACOT8^ENSG00000101473.17

chr20:45841882:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1259:29218:3186

NO_LDAS

0.0034

1.9219

1.8295

"[""INTERCHROMOSOMAL[chr19--chr20]""]"

chr19:51366276-chr20:45841882

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ETF1--SNX1

1.0

0.0

ONLY_REF_SPLICE

ETF1^ENSG00000120705.13

chr5:138542833:-

SNX1^ENSG00000028528.15

chr15:64112573:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1357:16428:6955

YES_LDAS

0.0034

1.231

1.8892

"[""INTERCHROMOSOMAL[chr5--chr15]""]"

chr5:138542833-chr15:64112573

False

Read

count

too

low:

FAIL

ESRP1--DPY19L4

1.0

0.0

ONLY_REF_SPLICE

ESRP1^ENSG00000104413.18

chr8:94678371:+

DPY19L4^ENSG00000156162.16

chr8:94726331:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1362:1793:21878

YES_LDAS

0.0034

1.9656

1.9329

"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[12237]""]"

chr8:94678371-chr8:94726331

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ESAM--ZNF514

1.0

0.0

INCL_NON_REF_SPLICE

ESAM^ENSG00000149564.12

chr11:124762195:-

ZNF514^ENSG00000144026.12

chr2:95159832:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1193:14243:14382

NO_LDAS

0.0034

1.7819

1.2419

"[""INTERCHROMOSOMAL[chr11--chr2]""]"

chr11:124762195-chr2:95159832

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ERN2--ZNF438

0.5

0.0

INCL_NON_REF_SPLICE

ERN2^ENSG00000134398.15

chr16:23691375:-

ZNF438^ENSG00000183621.15

chr10:30999345:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1403:43351:6927

NO_LDAS

0.0017

1.7968

1.8323

"[""INTERCHROMOSOMAL[chr16--chr10]""]"

chr16:23691375-chr10:30999345

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ERMP1--RAD18

1.0

0.0

INCL_NON_REF_SPLICE

ERMP1^ENSG00000099219.14

chr9:5832523:-

RAD18^ENSG00000070950.10

chr3:8941579:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1263:31338:23195

YES_LDAS

0.0034

1.5301

1.8892

"[""INTERCHROMOSOMAL[chr9--chr3]""]"

chr9:5832523-chr3:8941579

False

Read

count

too

low:

FAIL

ERCC2--AC092164.1

1.0

0.0

INCL_NON_REF_SPLICE

ERCC2^ENSG00000104884.16

chr19:45352746:-

AC092164.1^ENSG00000226833.6

chr2:28745124:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2232:3209:6647

NO_LDAS

0.0034

1.9656

"[""INTERCHROMOSOMAL[chr19--chr2]""]"

chr19:45352746-chr2:28745124

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EPSTI1--DNAJC15

1.0

0.0

ONLY_REF_SPLICE

EPSTI1^ENSG00000133106.15

chr13:42991978:-

DNAJC15^ENSG00000120675.6

chr13:43065686:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2154:19728:6759

YES_LDAS

0.0034

1.3996

1.5656

"[""DEEPEST2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr13:0.03Mb]"",""LOCAL_INVERSION:-:+:[30932]""]"

chr13:42991978-chr13:43065686

False

Read

count

too

low:

FAIL

EPRS1--ZBTB16

1.0

0.0

ONLY_REF_SPLICE

EPRS1^ENSG00000136628.18

chr1:220046343:-

ZBTB16^ENSG00000109906.14

chr11:114063211:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2186:15093:26110

YES_LDAS

0.0034

1.8892

1.6895

"[""INTERCHROMOSOMAL[chr1--chr11]""]"

chr1:220046343-chr11:114063211

False

Read

count

too

low:

FAIL

EPHX1--GLRA4

1.0

0.0

INCL_NON_REF_SPLICE

EPHX1^ENSG00000143819.13

chr1:225839346:+

GLRA4^ENSG00000188828.13

chrX:103719524:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2170:16598:6381

NO_LDAS

0.0034

1.8323

1.9899

"[""INTERCHROMOSOMAL[chr1--chrX]""]"

chr1:225839346-chrX:103719524

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EPHA2--GTPBP1

1.0

0.0

INCL_NON_REF_SPLICE

EPHA2^ENSG00000142627.13

chr1:16148417:-

GTPBP1^ENSG00000100226.16

chr22:38721827:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2153:24550:21472

NO_LDAS

0.0034

1.7819

1.8892

"[""INTERCHROMOSOMAL[chr1--chr22]""]"

chr1:16148417-chr22:38721827

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EPHA2--EPHA7

1.0

0.0

INCL_NON_REF_SPLICE

EPHA2^ENSG00000142627.13

chr1:16129570:-

EPHA7^ENSG00000135333.15

chr6:93246948:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2104:17318:12476

NO_LDAS

0.0034

1.7232

1.8295

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr1--chr6]""]"

chr1:16129570-chr6:93246948

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

EPB41L4B--TCEAL8

1.0

0.0

INCL_NON_REF_SPLICE

EPB41L4B^ENSG00000095203.15

chr9:109320141:-

TCEAL8^ENSG00000180964.17

chrX:103253940:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1346:49880:25662

NO_LDAS

0.0034

1.8323

1.7819

"[""INTERCHROMOSOMAL[chr9--chrX]""]"

chr9:109320141-chrX:103253940

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ENPP1--LARGE2

0.17

0.0

INCL_NON_REF_SPLICE

ENPP1^ENSG00000197594.13

chr6:131808221:+

LARGE2^ENSG00000165905.18

chr11:45923058:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1182:35933:8903

NO_LDAS

0.0006

1.7465

1.6729

"[""INTERCHROMOSOMAL[chr6--chr11]""]"

chr6:131808221-chr11:45923058

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ENOX2--MIR99AHG

1.0

0.0

INCL_NON_REF_SPLICE

ENOX2^ENSG00000165675.17

chrX:130656581:-

MIR99AHG^ENSG00000215386.13

chr21:15928464:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1469:1421:11846

NO_LDAS

0.0034

1.7968

1.9329

"[""INTERCHROMOSOMAL[chrX--chr21]""]"

chrX:130656581-chr21:15928464

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ENGASE--GRHL3

1.0

0.0

INCL_NON_REF_SPLICE

ENGASE^ENSG00000167280.17

chr17:79087369:+

GRHL3^ENSG00000158055.16

chr1:24354605:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1141:42324:20925

NO_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:79087369-chr1:24354605

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ENC1--SIRPA

0.5

0.0

ONLY_REF_SPLICE

ENC1^ENSG00000171617.15

chr5:74640307:-

SIRPA^ENSG00000198053.12

chr20:1895439:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1445:5781:20183

NO_LDAS

0.0017

1.8295

1.7056

"[""INTERCHROMOSOMAL[chr5--chr20]""]"

chr5:74640307-chr20:1895439

False

Read

count

too

low:

FAIL

EML4--LINC01099

0.5

0.0

ONLY_REF_SPLICE

EML4^ENSG00000143924.19

chr2:42256630:+

LINC01099^ENSG00000251504.1

chr4:177903948:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2286:29153:19132

NO_LDAS

0.0017

1.9656

1.8295

"[""INTERCHROMOSOMAL[chr2--chr4]""]"

chr2:42256630-chr4:177903948

True

pair|recurrent

breakpoints

Blacklisted

FAIL

EML4--AL161457.2

0.5

0.0

ONLY_REF_SPLICE

EML4^ENSG00000143924.19

chr2:42256630:+

AL161457.2^ENSG00000233178.7

chr9:68394439:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2286:29153:19132

NO_LDAS

0.0017

1.9656

1.8295

"[""INTERCHROMOSOMAL[chr2--chr9]""]"

chr2:42256630-chr9:68394439

False

Read

count

too

low:

FAIL

ELOVL5--AC113385.3

0.08

0.0

ONLY_REF_SPLICE

ELOVL5^ENSG00000012660.14

chr6:53348817:-

AC113385.3^ENSG00000275374.1

chr5:100381398:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1343:34428:23280

YES_LDAS

0.0003

1.9899

1.9656

"[""INTERCHROMOSOMAL[chr6--chr5]""]"

chr6:53348817-chr5:100381398

False

Read

count

too

low:

FAIL

ELF2--PGAM5

1.0

0.0

ONLY_REF_SPLICE

ELF2^ENSG00000109381.20

chr4:139176967:-

PGAM5^ENSG00000247077.7

chr12:132714858:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1416:25294:21612

YES_LDAS

0.0034

1.7465

1.9329

"[""INTERCHROMOSOMAL[chr4--chr12]""]"

chr4:139176967-chr12:132714858

False

Read

count

too

low:

FAIL

ELF2--GATAD1

0.5

0.0

INCL_NON_REF_SPLICE

ELF2^ENSG00000109381.20

chr4:139177143:-

GATAD1^ENSG00000157259.8

chr7:92447796:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1330:7310:16610

NO_LDAS

0.0017

0.8366

1.2419

"[""INTERCHROMOSOMAL[chr4--chr7]""]"

chr4:139177143-chr7:92447796

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ELF1--FRYL

1.0

0.0

ONLY_REF_SPLICE

ELF1^ENSG00000120690.16

chr13:40942952:-

FRYL^ENSG00000075539.15

chr4:48562988:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2403:11064:15769

NO_LDAS

0.0034

1.7819

1.8256

"[""INTERCHROMOSOMAL[chr13--chr4]""]"

chr13:40942952-chr4:48562988

False

Read

count

too

low:

FAIL

ELAPOR2--UVRAG

1.0

0.0

INCL_NON_REF_SPLICE

ELAPOR2^ENSG00000164659.15

chr7:87059325:-

UVRAG^ENSG00000198382.9

chr11:75979911:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1392:46199:4377

NO_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr7--chr11]""]"

chr7:87059325-chr11:75979911

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EIF4H--SLC11A1

0.5

0.0

INCL_NON_REF_SPLICE

EIF4H^ENSG00000106682.16

chr7:74196183:+

SLC11A1^ENSG00000018280.17

chr2:218385105:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2106:44913:19720

NO_LDAS

0.0017

1.8295

1.5656

"[""INTERCHROMOSOMAL[chr7--chr2]""]"

chr7:74196183-chr2:218385105

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EIF4H--GRIK3

0.5

0.0

INCL_NON_REF_SPLICE

EIF4H^ENSG00000106682.16

chr7:74196183:+

GRIK3^ENSG00000163873.10

chr1:36797707:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2106:44913:19720

NO_LDAS

0.0017

1.8295

1.5656

"[""INTERCHROMOSOMAL[chr7--chr1]""]"

chr7:74196183-chr1:36797707

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EIF4G2--MGP

1.0

0.0

INCL_NON_REF_SPLICE

EIF4G2^ENSG00000110321.19

chr11:10805915:-

MGP^ENSG00000111341.10

chr12:14885850:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1228:24720:17927

NO_LDAS

0.0034

1.9219

1.7968

"[""INTERCHROMOSOMAL[chr11--chr12]""]"

chr11:10805915-chr12:14885850

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EIF4G2--ITPR1

1.0

0.0

INCL_NON_REF_SPLICE

EIF4G2^ENSG00000110321.19

chr11:10800432:-

ITPR1^ENSG00000150995.20

chr3:4731149:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2252:9972:13037

NO_LDAS

0.0034

1.9656

1.8295

"[""INTERCHROMOSOMAL[chr11--chr3]""]"

chr11:10800432-chr3:4731149

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EIF3E--OXR1

1.0

0.0

ONLY_REF_SPLICE

EIF3E^ENSG00000104408.11

chr8:108248613:-

OXR1^ENSG00000164830.19

chr8:106518943:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2242:46458:15419

YES_LDAS

0.0034

1.9899

1.7968

"[""INTRACHROMOSOMAL[chr8:1.41Mb]""]"

chr8:108248613-chr8:106518943

False

Read

count

too

low:

FAIL

EIF3C--SLC39A14

0.5

0.0

ONLY_REF_SPLICE

EIF3C^ENSG00000184110.15

chr16:28715434:+

SLC39A14^ENSG00000104635.15

chr8:22433891:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2365:13540:14648

NO_LDAS

0.0017

1.5329

1.7968

"[""INTERCHROMOSOMAL[chr16--chr8]""]"

chr16:28715434-chr8:22433891

False

Read

count

too

low:

FAIL

EIF2B3--PRKCD

1.0

0.0

INCL_NON_REF_SPLICE

EIF2B3^ENSG00000070785.17

chr1:44857704:-

PRKCD^ENSG00000163932.15

chr3:53179694:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2441:51676:1813

YES_LDAS

0.0034

1.8323

1.9219

"[""INTERCHROMOSOMAL[chr1--chr3]""]"

chr1:44857704-chr3:53179694

False

Read

count

too

low:

FAIL

EIF2AK2--SH3GL1

1.0

0.0

INCL_NON_REF_SPLICE

EIF2AK2^ENSG00000055332.19

chr2:37156908:-

SH3GL1^ENSG00000141985.9

chr19:4366542:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1468:22050:16301

NO_LDAS

0.0034

1.231

1.8892

"[""INTERCHROMOSOMAL[chr2--chr19]""]"

chr2:37156908-chr19:4366542

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EI24P1--SLIT3

1.0

0.0

INCL_NON_REF_SPLICE

EI24P1^ENSG00000236357.1

chr3:176068388:-

SLIT3^ENSG00000184347.15

chr5:168711058:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2306:34913:15545

NO_LDAS

0.0034

1.4295

1.8062

"[""INTERCHROMOSOMAL[chr3--chr5]""]"

chr3:176068388-chr5:168711058

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EGFL6--MRPL34

1.0

0.0

INCL_NON_REF_SPLICE

EGFL6^ENSG00000198759.12

chrX:13569913:+

MRPL34^ENSG00000130312.7

chr19:17306166:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2269:20918:28212

NO_LDAS

0.0034

1.8062

1.6895

"[""INTERCHROMOSOMAL[chrX--chr19]""]"

chrX:13569913-chr19:17306166

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EFEMP2--ASXL2

1.0

0.0

INCL_NON_REF_SPLICE

EFEMP2^ENSG00000172638.13

chr11:65872755:-

ASXL2^ENSG00000143970.17

chr2:25771540:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1308:51781:10458

NO_LDAS

0.0034

1.3383

1.6895

"[""INTERCHROMOSOMAL[chr11--chr2]""]"

chr11:65872755-chr2:25771540

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

EFCAB2--KIF26B

1.0

0.0

ONLY_REF_SPLICE

EFCAB2^ENSG00000203666.12

chr1:245083688:+

KIF26B^ENSG00000162849.16

chr1:245366834:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2142:14672:7334

YES_LDAS

0.0034

1.7465

1.7819

"[""INTRACHROMOSOMAL[chr1:0.03Mb]"",""NEIGHBORS[27821]""]"

chr1:245083688-chr1:245366834

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

ECI1--ARPC4

1.0

0.0

INCL_NON_REF_SPLICE

ECI1^ENSG00000167969.13

chr16:2243185:-

ARPC4^ENSG00000241553.13

chr3:9806729:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2115:15513:10276

YES_LDAS

0.0034

1.6895

1.585

"[""INTERCHROMOSOMAL[chr16--chr3]""]"

chr16:2243185-chr3:9806729

False

Read

count

too

low:

FAIL

ECHDC2--ZNF584

1.0

0.0

INCL_NON_REF_SPLICE

ECHDC2^ENSG00000121310.17

chr1:52921553:-

ZNF584^ENSG00000171574.18

chr19:58416587:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1387:16015:11565

YES_LDAS

0.0034

1.7819

1.8323

"[""INTERCHROMOSOMAL[chr1--chr19]""]"

chr1:52921553-chr19:58416587

False

Read

count

too

low:

FAIL

ECE1--EPHB2

1.0

0.0

ONLY_REF_SPLICE

ECE1^ENSG00000117298.16

chr1:21345376:-

EPHB2^ENSG00000133216.17

chr1:22781421:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1276:27503:5372

NO_LDAS

0.0034

1.9329

1.9219

"[""INTRACHROMOSOMAL[chr1:1.37Mb]""]"

chr1:21345376-chr1:22781421

False

Read

count

too

low:

FAIL

EBF4--EBF2

1.0

0.0

INCL_NON_REF_SPLICE

EBF4^ENSG00000088881.21

chr20:2693782:+

EBF2^ENSG00000221818.9

chr8:26042197:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1208:45730:22929

YES_LDAS

0.0034

1.5219

1.8256

"[""INTERCHROMOSOMAL[chr20--chr8]""]"

chr20:2693782-chr8:26042197

False

Read

count

too

low:

FAIL

DZANK1--GNL3L

1.0

0.0

INCL_NON_REF_SPLICE

DZANK1^ENSG00000089091.16

chr20:18466860:-

GNL3L^ENSG00000130119.17

chrX:54563636:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1414:31346:21724

NO_LDAS

0.0034

1.8323

1.8892

"[""INTERCHROMOSOMAL[chr20--chrX]""]"

chr20:18466860-chrX:54563636

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DYRK2--PPFIBP1

1.0

0.0

ONLY_REF_SPLICE

DYRK2^ENSG00000127334.11

chr12:67649945:+

PPFIBP1^ENSG00000110841.14

chr12:27664362:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2314:49475:3943

YES_LDAS

0.0034

1.4566

1.6402

"[""INTRACHROMOSOMAL[chr12:39.95Mb]""]"

chr12:67649945-chr12:27664362

False

Read

count

too

low:

FAIL

DYNC1LI1--RAD18

1.0

0.0

ONLY_REF_SPLICE

DYNC1LI1^ENSG00000144635.9

chr3:32570346:-

RAD18^ENSG00000070950.10

chr3:8948570:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2273:24364:27820

YES_LDAS

0.0034

1.9329

1.8323

"[""INTRACHROMOSOMAL[chr3:23.56Mb]""]"

chr3:32570346-chr3:8948570

False

Read

count

too

low:

FAIL

DYNC1I2--OLA1

1.0

0.0

ONLY_REF_SPLICE

DYNC1I2^ENSG00000077380.16

chr2:171692894:+

OLA1^ENSG00000138430.16

chr2:174229451:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1407:39298:4335

YES_LDAS

0.0034

1.8892

1.7465

"[""INTRACHROMOSOMAL[chr2:2.32Mb]""]"

chr2:171692894-chr2:174229451

False

Read

count

too

low:

FAIL

DUSP16--GHITM

1.0

0.0

INCL_NON_REF_SPLICE

DUSP16^ENSG00000111266.9

chr12:12477490:-

GHITM^ENSG00000165678.21

chr10:84142655:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1432:45058:14031

YES_LDAS

0.0034

1.6895

1.7968

"[""INTERCHROMOSOMAL[chr12--chr10]""]"

chr12:12477490-chr10:84142655

False

Read

count

too

low:

FAIL

DUSP1--PEAK1

1.0

0.0

INCL_NON_REF_SPLICE

DUSP1^ENSG00000120129.6

chr5:172769005:-

PEAK1^ENSG00000173517.10

chr15:77180701:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2306:35714:19482

YES_LDAS

0.0034

1.8323

"[""INTERCHROMOSOMAL[chr5--chr15]""]"

chr5:172769005-chr15:77180701

False

Read

count

too

low:

FAIL

DTNA--ATAD5

1.0

0.0

ONLY_REF_SPLICE

DTNA^ENSG00000134769.22

chr18:34657019:+

ATAD5^ENSG00000176208.9

chr17:30869248:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1130:28676:12224

NO_LDAS

0.0034

1.9899

1.9086

"[""INTERCHROMOSOMAL[chr18--chr17]""]"

chr18:34657019-chr17:30869248

False

Read

count

too

low:

FAIL

DSG2--FBXO33

1.0

0.0

INCL_NON_REF_SPLICE

DSG2^ENSG00000046604.13

chr18:31547405:+

FBXO33^ENSG00000165355.7

chr14:39432011:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1249:19906:18754

YES_LDAS

0.0034

1.8295

1.2867

"[""INTERCHROMOSOMAL[chr18--chr14]""]"

chr18:31547405-chr14:39432011

False

Read

count

too

low:

FAIL

DPYSL5--DCTN1

1.0

0.0

INCL_NON_REF_SPLICE

DPYSL5^ENSG00000157851.17

chr2:26898520:+

DCTN1^ENSG00000204843.13

chr2:74361419:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2391:38966:20099

NO_LDAS

0.0034

1.7465

1.7819

"[""INTRACHROMOSOMAL[chr2:47.41Mb]""]"

chr2:26898520-chr2:74361419

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DPYSL3--PITPNC1

1.0

0.0

ONLY_REF_SPLICE

DPYSL3^ENSG00000113657.13

chr5:147395559:-

PITPNC1^ENSG00000154217.15

chr17:67532802:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1327:32147:13919

YES_LDAS

0.0034

1.9656

1.8295

"[""INTERCHROMOSOMAL[chr5--chr17]""]"

chr5:147395559-chr17:67532802

False

Read

count

too

low:

FAIL

DPYSL2--PDCD7

1.0

0.0

INCL_NON_REF_SPLICE

DPYSL2^ENSG00000092964.18

chr8:26627946:+

PDCD7^ENSG00000090470.15

chr15:65133190:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2236:24218:20869

NO_LDAS

0.0034

1.8892

1.5219

"[""INTERCHROMOSOMAL[chr8--chr15]""]"

chr8:26627946-chr15:65133190

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DOK4--GOT2

1.0

0.0

ONLY_REF_SPLICE

DOK4^ENSG00000125170.11

chr16:57486305:-

GOT2^ENSG00000125166.13

chr16:58708293:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2270:23102:7726

YES_LDAS

0.0034

1.5628

1.8295

"[""INTRACHROMOSOMAL[chr16:1.22Mb]""]"

chr16:57486305-chr16:58708293

False

Read

count

too

low:

FAIL

DOCK9--BVES

1.0

0.0

INCL_NON_REF_SPLICE

DOCK9^ENSG00000088387.19

chr13:98860405:-

BVES^ENSG00000112276.14

chr6:105098078:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2136:31346:27161

NO_LDAS

0.0034

1.8892

1.5656

"[""INTERCHROMOSOMAL[chr13--chr6]""]"

chr13:98860405-chr6:105098078

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DOCK7--VAV3

1.0

0.0

ONLY_REF_SPLICE

DOCK7^ENSG00000116641.18

chr1:62688227:-

VAV3^ENSG00000134215.16

chr1:107617632:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1115:29315:3186

YES_LDAS

0.0034

1.8062

1.8892

"[""INTRACHROMOSOMAL[chr1:44.88Mb]""]"

chr1:62688227-chr1:107617632

False

Read

count

too

low:

FAIL

DNM1P35--DNM1P41

0.33

0.0

INCL_NON_REF_SPLICE

DNM1P35^ENSG00000246877.1

chr15:75738387:-

DNM1P41^ENSG00000280038.1

chr15:84169244:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2205:40471:22845

NO_LDAS

0.0011

1.6895

1.7819

"[""INTRACHROMOSOMAL[chr15:8.43Mb]""]"

chr15:75738387-chr15:84169244

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DNM1P35--CSPG4P10

0.33

0.0

INCL_NON_REF_SPLICE

DNM1P35^ENSG00000246877.1

chr15:75738387:-

CSPG4P10^ENSG00000276710.4

chr15:82475940:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2205:40471:22845

NO_LDAS

0.0011

1.6895

1.7819

"[""INTRACHROMOSOMAL[chr15:6.72Mb]""]"

chr15:75738387-chr15:82475940

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DNAJC11--CADPS

1.0

0.0

INCL_NON_REF_SPLICE

DNAJC11^ENSG00000007923.16

chr1:6667770:-

CADPS^ENSG00000163618.18

chr3:62874717:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2435:38861:21346

NO_LDAS

0.0034

1.7819

1.8295

"[""INTERCHROMOSOMAL[chr1--chr3]""]"

chr1:6667770-chr3:62874717

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DNAJC1--ABI1

1.0

0.0

ONLY_REF_SPLICE

DNAJC1^ENSG00000136770.11

chr10:22003213:-

ABI1^ENSG00000136754.18

chr10:26823305:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1255:41499:9127

YES_LDAS

0.0034

1.7968

1.7465

"[""INTRACHROMOSOMAL[chr10:4.74Mb]""]"

chr10:22003213-chr10:26823305

False

Read

count

too

low:

FAIL

DNAJA3--NFASC

1.0

0.0

INCL_NON_REF_SPLICE

DNAJA3^ENSG00000103423.14

chr16:4443164:+

NFASC^ENSG00000163531.16

chr1:204944307:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1482:5830:4237

NO_LDAS

0.0034

1.8062

1.7968

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:4443164-chr1:204944307

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DMXL1--USP47

1.0

0.0

ONLY_REF_SPLICE

DMXL1^ENSG00000172869.14

chr5:119121139:+

USP47^ENSG00000170242.19

chr11:11902715:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1174:7731:9267

YES_LDAS

0.0034

1.6895

1.5656

"[""INTERCHROMOSOMAL[chr5--chr11]""]"

chr5:119121139-chr11:11902715

False

Read

count

too

low:

FAIL

DLL1--GSK3B

0.5

0.0

INCL_NON_REF_SPLICE

DLL1^ENSG00000198719.9

chr6:170290653:-

GSK3B^ENSG00000082701.17

chr3:120094059:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2242:24744:18361

NO_LDAS

0.0017

1.1589

1.2419

"[""INTERCHROMOSOMAL[chr6--chr3]""]"

chr6:170290653-chr3:120094059

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DLL1--CTBP2

0.5

0.0

INCL_NON_REF_SPLICE

DLL1^ENSG00000198719.9

chr6:170290653:-

CTBP2^ENSG00000175029.17

chr10:125160428:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2242:24744:18361

NO_LDAS

0.0017

1.1589

1.2419

"[""INTERCHROMOSOMAL[chr6--chr10]""]"

chr6:170290653-chr10:125160428

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DLG4--LCAL1

0.5

0.0

ONLY_REF_SPLICE

DLG4^ENSG00000132535.21

chr17:7204199:-

LCAL1^ENSG00000286042.1

chr6:79312480:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2171:26848:12364

NO_LDAS

0.0017

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr17--chr6]""]"

chr17:7204199-chr6:79312480

False

Read

count

too

low:

FAIL

DIPK2B--AC008556.1

1.0

0.0

INCL_NON_REF_SPLICE

DIPK2B^ENSG00000147113.17

chrX:45191751:-

AC008556.1^ENSG00000277013.1

chr19:33906815:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2271:27341:20673

NO_LDAS

0.0034

1.8323

1.5219

"[""INTERCHROMOSOMAL[chrX--chr19]""]"

chrX:45191751-chr19:33906815

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DIP2A--CEPT1

1.0

0.0

ONLY_REF_SPLICE

DIP2A^ENSG00000160305.18

chr21:46509376:+

CEPT1^ENSG00000134255.14

chr1:111147642:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2313:40520:11103

YES_LDAS

0.0034

1.5656

1.7819

"[""INTERCHROMOSOMAL[chr21--chr1]""]"

chr21:46509376-chr1:111147642

False

Read

count

too

low:

FAIL

DIO3OS--TMEM198B

1.0

0.0

INCL_NON_REF_SPLICE

DIO3OS^ENSG00000258498.8

chr14:101559916:-

TMEM198B^ENSG00000182796.14

chr12:55830379:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1160:37445:21276

YES_LDAS

0.0034

1.5546

1.5656

"[""INTERCHROMOSOMAL[chr14--chr12]""]"

chr14:101559916-chr12:55830379

False

Read

count

too

low:

FAIL

DIAPH2--RAB40A

1.0

0.0

INCL_NON_REF_SPLICE

DIAPH2^ENSG00000147202.18

chrX:97429745:+

RAB40A^ENSG00000172476.4

chrX:103519456:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1438:39759:12420

YES_LDAS

0.0034

1.9656

1.9086

"[""INTRACHROMOSOMAL[chrX:5.89Mb]""]"

chrX:97429745-chrX:103519456

False

Read

count

too

low:

FAIL

DHX58--PLSCR3

1.0

0.0

INCL_NON_REF_SPLICE

DHX58^ENSG00000108771.13

chr17:42101824:-

PLSCR3^ENSG00000187838.17

chr17:7392868:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1218:44985:2724

YES_LDAS

0.0034

1.4566

1.9086

"[""INTRACHROMOSOMAL[chr17:34.71Mb]""]"

chr17:42101824-chr17:7392868

False

Read

count

too

low:

FAIL

DHX16--HLA-DMB

1.0

0.0

ONLY_REF_SPLICE

DHX16^ENSG00000204560.10

chr6:30672635:-

HLA-DMB^ENSG00000242574.9

chr6:32937456:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1151:19486:27357

YES_LDAS

0.0034

1.8892

"[""INTRACHROMOSOMAL[chr6:2.26Mb]""]"

chr6:30672635-chr6:32937456

False

Read

count

too

low:

FAIL

DHX15--FAM83G

1.0

0.0

INCL_NON_REF_SPLICE

DHX15^ENSG00000109606.13

chr4:24570770:-

FAM83G^ENSG00000188522.15

chr17:18969010:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1303:8904:28870

NO_LDAS

0.0034

1.5219

1.8062

"[""INTERCHROMOSOMAL[chr4--chr17]""]"

chr4:24570770-chr17:18969010

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DHRSX--ASCC1

1.0

0.0

ONLY_REF_SPLICE

DHRSX^ENSG00000169084.15

chrX:2243023:-

ASCC1^ENSG00000138303.18

chr10:72212285:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1197:18029:8048

NO_LDAS

0.0034

1.7968

1.7232

"[""INTERCHROMOSOMAL[chrY--chr10]""]"

chrX:2243023-chr10:72212285

False

Read

count

too

low:

FAIL

DHRS4--STRN3

1.0

0.0

ONLY_REF_SPLICE

DHRS4^ENSG00000157326.19

chr14:23955212:+

STRN3^ENSG00000196792.12

chr14:30936624:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1408:44581:25928

NO_LDAS

0.0034

1.6895

1.7819

"[""INTRACHROMOSOMAL[chr14:6.92Mb]""]"

chr14:23955212-chr14:30936624

False

Read

count

too

low:

FAIL

DHRS3--SNHG8

1.0

0.0

ONLY_REF_SPLICE

DHRS3^ENSG00000162496.9

chr1:12572728:-

SNHG8^ENSG00000269893.8

chr4:118279624:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1272:23644:26713

NO_LDAS

0.0034

1.9086

1.7465

"[""INTERCHROMOSOMAL[chr1--chr4]""]"

chr1:12572728-chr4:118279624

False

Read

count

too

low:

FAIL

DHCR24--MAMSTR

0.25

0.0

INCL_NON_REF_SPLICE

DHCR24^ENSG00000116133.13

chr1:54854091:-

MAMSTR^ENSG00000176909.12

chr19:48715446:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1288:30351:17478

NO_LDAS

0.0009

1.9219

1.9656

"[""INTERCHROMOSOMAL[chr1--chr19]""]"

chr1:54854091-chr19:48715446

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DGCR8--TANGO2

1.0

0.0

ONLY_REF_SPLICE

DGCR8^ENSG00000128191.16

chr22:20094795:+

TANGO2^ENSG00000183597.16

chr22:20036760:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2261:36798:18922

YES_LDAS

0.0034

1.8323

1.8892

"[""INTRACHROMOSOMAL[chr22:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[13068]""]"

chr22:20094795-chr22:20036760

False

Read

count

too

low:

FAIL

DFFB--AC106782.6

1.0

0.0

INCL_NON_REF_SPLICE

DFFB^ENSG00000169598.17

chr1:3883977:+

AC106782.6^ENSG00000278887.2

chr16:30206806:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2467:36337:2513

NO_LDAS

0.0034

1.8892

1.7968

"[""INTERCHROMOSOMAL[chr1--chr16]""]"

chr1:3883977-chr16:30206806

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DENND3--AC073111.3

1.0

0.0

ONLY_REF_SPLICE

DENND3^ENSG00000105339.11

chr8:141128809:+

AC073111.3^ENSG00000284691.1

chr7:150407584:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1298:47566:27343

YES_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr8--chr7]""]"

chr8:141128809-chr7:150407584

False

Read

count

too

low:

FAIL

DENND1B--DENND1A

1.0

0.0

ONLY_REF_SPLICE

DENND1B^ENSG00000213047.13

chr1:197617659:-

DENND1A^ENSG00000119522.16

chr9:123609481:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1489:32632:12602

NO_LDAS

0.0034

1.9329

1.7968

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr1--chr9]""]"

chr1:197617659-chr9:123609481

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

DENND11--KIAA1549

1.0

0.0

ONLY_REF_SPLICE

DENND11^ENSG00000257093.7

chr7:141701886:-

KIAA1549^ENSG00000122778.10

chr7:138919438:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1236:20918:25409

YES_LDAS

0.0034

1.6402

1.9329

"[""INTRACHROMOSOMAL[chr7:2.68Mb]""]"

chr7:141701886-chr7:138919438

False

Read

count

too

low:

FAIL

DDX51--LINC01725

1.0

0.0

INCL_NON_REF_SPLICE

DDX51^ENSG00000185163.10

chr12:132139635:-

LINC01725^ENSG00000233008.6

chr1:83746592:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1111:25933:13835

NO_LDAS

0.0034

1.8892

1.5656

"[""INTERCHROMOSOMAL[chr12--chr1]""]"

chr12:132139635-chr1:83746592

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DDX24--AL022099.1

1.0

0.0

INCL_NON_REF_SPLICE

DDX24^ENSG00000089737.17

chr14:94051188:-

AL022099.1^ENSG00000271162.1

chr6:48952713:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1118:34112:29487

NO_LDAS

0.0034

1.8892

1.8323

"[""INTERCHROMOSOMAL[chr14--chr6]""]"

chr14:94051188-chr6:48952713

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

DDI2--SRSF1

1.0

0.0

ONLY_REF_SPLICE

DDI2^ENSG00000197312.12

chr1:15633565:+

SRSF1^ENSG00000136450.13

chr17:58006527:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2468:47226:20869

YES_LDAS

0.0034

1.3383

1.5656

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:15633565-chr17:58006527

False

Read

count

too

low:

FAIL

DCUN1D4--POLL

1.0

0.0

INCL_NON_REF_SPLICE

DCUN1D4^ENSG00000109184.15

chr4:51877486:+

POLL^ENSG00000166169.17

chr10:101579282:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1286:18830:18487

NO_LDAS

0.0034

1.3996

1.5301

"[""INTERCHROMOSOMAL[chr4--chr10]""]"

chr4:51877486-chr10:101579282

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DCK--SEZ6

0.5

0.0

INCL_NON_REF_SPLICE

DCK^ENSG00000156136.10

chr4:70993706:+

SEZ6^ENSG00000063015.20

chr17:29005922:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2330:13952:29291

NO_LDAS

0.0017

0.9968

0.9056

"[""INTERCHROMOSOMAL[chr4--chr17]""]"

chr4:70993706-chr17:29005922

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DCK--ATF6

1.0

0.0

ONLY_REF_SPLICE

DCK^ENSG00000156136.10

chr4:70993926:+

ATF6^ENSG00000118217.7

chr1:161958446:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2281:15619:20631

YES_LDAS

0.0034

1.9086

1.8062

"[""INTERCHROMOSOMAL[chr4--chr1]""]"

chr4:70993926-chr1:161958446

False

Read

count

too

low:

FAIL

DCAF15--POMT1

0.5

0.0

INCL_NON_REF_SPLICE

DCAF15^ENSG00000132017.10

chr19:13959297:+

POMT1^ENSG00000130714.18

chr9:131515440:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2179:19510:24765

NO_LDAS

0.0017

1.6402

1.2366

"[""INTERCHROMOSOMAL[chr19--chr9]""]"

chr19:13959297-chr9:131515440

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DCAF12--PDE12

1.0

0.0

INCL_NON_REF_SPLICE

DCAF12^ENSG00000198876.13

chr9:34126354:-

PDE12^ENSG00000174840.9

chr3:57563077:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2321:15044:5232

NO_LDAS

0.0034

1.7056

1.5656

"[""INTERCHROMOSOMAL[chr9--chr3]""]"

chr9:34126354-chr3:57563077

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DBNL--CAND2

1.0

0.0

INCL_NON_REF_SPLICE

DBNL^ENSG00000136279.21

chr7:44050280:+

CAND2^ENSG00000144712.12

chr3:12831525:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1190:14777:1098

NO_LDAS

0.0034

1.7232

1.8892

"[""INTERCHROMOSOMAL[chr7--chr3]""]"

chr7:44050280-chr3:12831525

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DBNL--ANAPC5

1.0

0.0

INCL_NON_REF_SPLICE

DBNL^ENSG00000136279.21

chr7:44051946:+

ANAPC5^ENSG00000089053.13

chr12:121352198:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1172:7885:9085

NO_LDAS

0.0034

1.9656

1.6895

"[""INTERCHROMOSOMAL[chr7--chr12]""]"

chr7:44051946-chr12:121352198

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DAPK1-IT1--AC112504.1

1.0

0.0

INCL_NON_REF_SPLICE

DAPK1-IT1^ENSG00000236709.1

chr9:87553590:+

AC112504.1^ENSG00000279147.1

chr3:141938493:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2258:12933:17773

NO_LDAS

0.0034

1.5546

1.9329

"[""INTERCHROMOSOMAL[chr9--chr3]""]"

chr9:87553590-chr3:141938493

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

DAB2--POGZ

1.0

0.0

INCL_NON_REF_SPLICE

DAB2^ENSG00000153071.15

chr5:39382686:-

POGZ^ENSG00000143442.22

chr1:151405794:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1298:19494:24485

YES_LDAS

0.0034

1.6729

1.7232

"[""INTERCHROMOSOMAL[chr5--chr1]""]"

chr5:39382686-chr1:151405794

False

Read

count

too

low:

FAIL

CYP2W1--DDX51

1.0

0.0

INCL_NON_REF_SPLICE

CYP2W1^ENSG00000073067.14

chr7:983385:+

DDX51^ENSG00000185163.10

chr12:132140493:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1430:1453:10500

NO_LDAS

0.0034

1.8892

1.6895

"[""INTERCHROMOSOMAL[chr7--chr12]""]"

chr7:983385-chr12:132140493

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CYP2W1--AC134312.5

1.0

0.0

INCL_NON_REF_SPLICE

CYP2W1^ENSG00000073067.14

chr7:983385:+

AC134312.5^ENSG00000261327.5

chr16:88178398:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1136:12075:4265

NO_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr7--chr16]""]"

chr7:983385-chr16:88178398

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CYP2B6--CRYBB2P1

1.0

0.0

ONLY_REF_SPLICE

CYP2B6^ENSG00000197408.10

chr19:41007600:+

CRYBB2P1^ENSG00000100058.12

chr22:25455712:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2352:51207:16946

NO_LDAS

0.0034

1.9219

1.8892

"[""INTERCHROMOSOMAL[chr19--chr22]""]"

chr19:41007600-chr22:25455712

False

Read

count

too

low:

FAIL

CYP20A1--SPECC1

1.0

0.0

INCL_NON_REF_SPLICE

CYP20A1^ENSG00000119004.16

chr2:203245895:+

SPECC1^ENSG00000128487.18

chr17:20315855:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1338:20934:5876

NO_LDAS

0.0034

1.7232

1.9656

"[""INTERCHROMOSOMAL[chr2--chr17]""]"

chr2:203245895-chr17:20315855

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

CYP20A1--SPECC1

1.0

0.0

INCL_NON_REF_SPLICE

CYP20A1^ENSG00000119004.16

chr2:203239134:+

SPECC1^ENSG00000128487.18

chr17:20315855:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2286:23482:17857

NO_LDAS

0.0034

1.6895

1.9656

"[""INTERCHROMOSOMAL[chr2--chr17]""]"

chr2:203239134-chr17:20315855

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

CYFIP1--HERC2P2

0.5

0.0

ONLY_REF_SPLICE

CYFIP1^ENSG00000273749.5

chr15:22879913:-

HERC2P2^ENSG00000276550.4

chr15:22577159:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1412:18418:12952

YES_LDAS

0.0017

1.9329

1.5058

"[""INTRACHROMOSOMAL[chr15:0.28Mb]""]"

chr15:22879913-chr15:22577159

False

Read

count

too

low:

FAIL

CXXC1--USP2-AS1

1.0

0.0

INCL_NON_REF_SPLICE

CXXC1^ENSG00000154832.16

chr18:50286616:-

USP2-AS1^ENSG00000245248.8

chr11:119469833:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1132:4713:27946

NO_LDAS

0.0034

1.9656

1.9329

"[""INTERCHROMOSOMAL[chr18--chr11]""]"

chr18:50286616-chr11:119469833

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CXCL14--CCNC

1.0

0.0

INCL_NON_REF_SPLICE

CXCL14^ENSG00000145824.13

chr5:135578715:-

CCNC^ENSG00000112237.13

chr6:99543596:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2249:45163:11691

NO_LDAS

0.0034

1.6895

1.9086

"[""INTERCHROMOSOMAL[chr5--chr6]""]"

chr5:135578715-chr6:99543596

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CUL4A--CUL4B

1.0

0.0

ONLY_REF_SPLICE

CUL4A^ENSG00000139842.15

chr13:113228045:+

CUL4B^ENSG00000158290.19

chrX:120545517:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2180:9017:13205

NO_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr13--chrX]""]"

chr13:113228045-chrX:120545517

False

Read

count

too

low:

FAIL

CU633906.2--HELZ

0.33

0.0

ONLY_REF_SPLICE

CU633906.2^ENSG00000278903.3

chr21:6322697:+

HELZ^ENSG00000198265.12

chr17:67087081:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1263:50834:15797

YES_LDAS

0.0011

1.9219

1.9086

"[""INTERCHROMOSOMAL[chr21--chr17]""]"

chr21:6322697-chr17:67087081

False

Read

count

too

low:

FAIL

CTSK--PUM2

1.0

0.0

INCL_NON_REF_SPLICE

CTSK^ENSG00000143387.14

chr1:150799491:-

PUM2^ENSG00000055917.16

chr2:20327378:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2380:34857:27693

NO_LDAS

0.0034

1.8892

1.6895

"[""INTERCHROMOSOMAL[chr1--chr2]""]"

chr1:150799491-chr2:20327378

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CTNND1--LPXN

1.0

0.0

ONLY_REF_SPLICE

CTNND1^ENSG00000198561.15

chr11:57762046:+

LPXN^ENSG00000110031.13

chr11:58528191:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2195:18062:21864

YES_LDAS

0.0034

1.9329

"[""INTRACHROMOSOMAL[chr11:0.71Mb]""]"

chr11:57762046-chr11:58528191

False

Read

count

too

low:

FAIL

CTNND1--L3MBTL3

1.0

0.0

ONLY_REF_SPLICE

CTNND1^ENSG00000198561.15

chr11:57762046:+

L3MBTL3^ENSG00000198945.8

chr6:130022227:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2317:32947:22873

YES_LDAS

0.0034

1.9329

1.8295

"[""INTERCHROMOSOMAL[chr11--chr6]""]"

chr11:57762046-chr6:130022227

False

Read

count

too

low:

FAIL

CTDSPL--ANO10

1.0

0.0

ONLY_REF_SPLICE

CTDSPL^ENSG00000144677.15

chr3:37862278:+

ANO10^ENSG00000160746.13

chr3:43580472:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1275:43416:17380

NO_LDAS

0.0034

1.4566

1.9329

"[""INTRACHROMOSOMAL[chr3:5.37Mb]""]"

chr3:37862278-chr3:43580472

False

Read

count

too

low:

FAIL

CTBP1-AS--TECPR2

1.0

0.0

INCL_NON_REF_SPLICE

CTBP1-AS^ENSG00000280927.1

chr4:1212436:+

TECPR2^ENSG00000196663.16

chr14:102434836:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2162:3581:15867

NO_LDAS

0.0034

1.8295

1.6895

"[""INTERCHROMOSOMAL[chr4--chr14]""]"

chr4:1212436-chr14:102434836

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CSPP1--AC092070.2

1.0

0.0

ONLY_REF_SPLICE

CSPP1^ENSG00000104218.16

chr8:67074923:+

AC092070.2^ENSG00000269001.2

chr19:53204016:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1140:22099:25802

NO_LDAS

0.0034

1.9656

1.9329

"[""INTERCHROMOSOMAL[chr8--chr19]""]"

chr8:67074923-chr19:53204016

False

Read

count

too

low:

FAIL

CSNK2A1--MALL

0.25

0.0

ONLY_REF_SPLICE

CSNK2A1^ENSG00000101266.19

chr20:483928:-

MALL^ENSG00000144063.4

chr2:110091770:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2270:4818:9435

YES_LDAS

0.0009

1.8892

1.6402

"[""INTERCHROMOSOMAL[chr20--chr2]""]"

chr20:483928-chr2:110091770

False

Read

count

too

low:

FAIL

CRYZL2P--TAF2

1.0

0.0

ONLY_REF_SPLICE

CRYZL2P^ENSG00000242193.11

chr1:178034705:-

TAF2^ENSG00000064313.12

chr8:119802025:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1127:7132:28576

YES_LDAS

0.0034

1.6895

1.6729

"[""INTERCHROMOSOMAL[chr1--chr8]""]"

chr1:178034705-chr8:119802025

False

Read

count

too

low:

FAIL

CRYL1--PPP2R5C

1.0

0.0

ONLY_REF_SPLICE

CRYL1^ENSG00000165475.15

chr13:20432102:-

PPP2R5C^ENSG00000078304.19

chr14:101856686:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1119:32187:18669

YES_LDAS

0.0034

1.7232

1.7819

"[""INTERCHROMOSOMAL[chr13--chr14]""]"

chr13:20432102-chr14:101856686

False

Read

count

too

low:

FAIL

CRYBG1--ZNF624

0.5

0.0

INCL_NON_REF_SPLICE

CRYBG1^ENSG00000112297.18

chr6:106520162:+

ZNF624^ENSG00000197566.10

chr17:16622079:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1430:43772:28254

NO_LDAS

0.0017

1.7819

1.8295

"[""INTERCHROMOSOMAL[chr6--chr17]""]"

chr6:106520162-chr17:16622079

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CRTC3--CLASP1

1.0

0.0

ONLY_REF_SPLICE

CRTC3^ENSG00000140577.16

chr15:90629532:+

CLASP1^ENSG00000074054.20

chr2:121430177:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1269:20173:3774

YES_LDAS

0.0034

1.7465

1.9329

"[""INTERCHROMOSOMAL[chr15--chr2]""]"

chr15:90629532-chr2:121430177

False

Read

count

too

low:

FAIL

CRLF3--CEP192

1.0

0.0

ONLY_REF_SPLICE

CRLF3^ENSG00000176390.12

chr17:30824523:-

CEP192^ENSG00000101639.18

chr18:12999421:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2349:14017:18445

YES_LDAS

0.0034

1.371

1.585

"[""INTERCHROMOSOMAL[chr17--chr18]""]"

chr17:30824523-chr18:12999421

False

Read

count

too

low:

FAIL

CRK--CAPN8

1.0

0.0

ONLY_REF_SPLICE

CRK^ENSG00000167193.8

chr17:1455877:-

CAPN8^ENSG00000203697.12

chr1:223628780:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1496:8427:28969

YES_LDAS

0.0034

1.3753

1.8256

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:1455877-chr1:223628780

False

Read

count

too

low:

FAIL

CRELD1--LRP4

1.0

0.0

ONLY_REF_SPLICE

CRELD1^ENSG00000163703.19

chr3:9938106:+

LRP4^ENSG00000134569.10

chr11:46896994:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1440:23757:18417

NO_LDAS

0.0034

1.4566

1.8892

"[""INTERCHROMOSOMAL[chr3--chr11]""]"

chr3:9938106-chr11:46896994

False

Read

count

too

low:

FAIL

CPA6--NSMAF

1.0

0.0

ONLY_REF_SPLICE

CPA6^ENSG00000165078.13

chr8:67746014:-

NSMAF^ENSG00000035681.9

chr8:58623780:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2495:8621:2261

NO_LDAS

0.0034

1.9656

1.7465

"[""INTRACHROMOSOMAL[chr8:8.76Mb]""]"

chr8:67746014-chr8:58623780

False

Read

count

too

low:

FAIL

CORO6--CORO1A

1.0

0.0

ONLY_REF_SPLICE

CORO6^ENSG00000167549.18

chr17:29616702:-

CORO1A^ENSG00000102879.16

chr16:30188192:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1241:29064:27469

NO_LDAS

0.0034

1.8892

1.9899

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr17--chr16]""]"

chr17:29616702-chr16:30188192

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

CORO1C--WDTC1

1.0

0.0

INCL_NON_REF_SPLICE

CORO1C^ENSG00000110880.11

chr12:108730469:-

WDTC1^ENSG00000142784.16

chr1:27234880:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1163:17973:20982

NO_LDAS

0.0034

1.5546

0.9183

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr12--chr1]""]"

chr12:108730469-chr1:27234880

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

COQ8B--PRPF3

1.0

0.0

ONLY_REF_SPLICE

COQ8B^ENSG00000123815.13

chr19:40710059:-

PRPF3^ENSG00000117360.13

chr1:150349157:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1238:2707:11691

YES_LDAS

0.0034

1.9329

1.8062

"[""INTERCHROMOSOMAL[chr19--chr1]""]"

chr19:40710059-chr1:150349157

False

Read

count

too

low:

FAIL

COQ4--LGALS9B

0.5

0.0

ONLY_REF_SPLICE

COQ4^ENSG00000167113.11

chr9:128325881:+

LGALS9B^ENSG00000170298.15

chr17:20455398:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1276:2108:16091

YES_LDAS

0.0017

1.9656

1.7968

"[""INTERCHROMOSOMAL[chr9--chr17]""]"

chr9:128325881-chr17:20455398

False

Read

count

too

low:

FAIL

COMT--FBXO16

0.5

0.0

INCL_NON_REF_SPLICE

COMT^ENSG00000093010.15

chr22:19941866:+

FBXO16^ENSG00000214050.8

chr8:28447273:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1289:17123:17661

NO_LDAS

0.0017

1.231

0.7219

"[""INTERCHROMOSOMAL[chr22--chr8]""]"

chr22:19941866-chr8:28447273

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

COMMD4--MTFP1

1.0

0.0

INCL_NON_REF_SPLICE

COMMD4^ENSG00000140365.16

chr15:75339878:+

MTFP1^ENSG00000242114.6

chr22:30427179:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2124:33044:6927

NO_LDAS

0.0034

1.9086

1.7819

"[""INTERCHROMOSOMAL[chr15--chr22]""]"

chr15:75339878-chr22:30427179

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

COMMD4--AF241728.1

1.0

0.0

INCL_NON_REF_SPLICE

COMMD4^ENSG00000140365.16

chr15:75340045:+

AF241728.1^ENSG00000235806.1

chrX:38791904:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1444:9341:22397

NO_LDAS

0.0034

1.5329

1.9656

"[""INTERCHROMOSOMAL[chr15--chrX]""]"

chr15:75340045-chrX:38791904

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

COL28A1--UMAD1

1.0

0.0

ONLY_REF_SPLICE

COL28A1^ENSG00000215018.10

chr7:7417859:-

UMAD1^ENSG00000219545.11

chr7:7801670:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1490:5352:14228

YES_LDAS

0.0034

1.8295

1.7968

"[""INTRACHROMOSOMAL[chr7:0.10Mb]""]"

chr7:7417859-chr7:7801670

False

Read

count

too

low:

FAIL

COG5--ZNF397

1.0

0.0

INCL_NON_REF_SPLICE

COG5^ENSG00000164597.15

chr7:107258312:-

ZNF397^ENSG00000186812.13

chr18:35248647:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1388:37761:19188

YES_LDAS

0.0034

1.7819

1.9656

"[""INTERCHROMOSOMAL[chr7--chr18]""]"

chr7:107258312-chr18:35248647

False

Read

count

too

low:

FAIL

COG2--KIFAP3

1.0

0.0

ONLY_REF_SPLICE

COG2^ENSG00000135775.14

chr1:230675124:+

KIFAP3^ENSG00000075945.13

chr1:170024596:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1460:51150:21332

YES_LDAS

0.0034

1.9329

1.5546

"[""INTRACHROMOSOMAL[chr1:60.56Mb]""]"

chr1:230675124-chr1:170024596

False

Read

count

too

low:

FAIL

COBLL1--AL445193.2

1.0

0.0

INCL_NON_REF_SPLICE

COBLL1^ENSG00000082438.18

chr2:164841156:-

AL445193.2^ENSG00000235038.1

chr1:58060255:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1159:46045:28548

NO_LDAS

0.0034

1.5058

1.2419

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:164841156-chr1:58060255

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CNTNAP3C--BX005040.4

1.0

0.0

ONLY_REF_SPLICE

CNTNAP3C^ENSG00000283378.1

chr9:61453030:+

BX005040.4^ENSG00000283541.1

chr9:61104578:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1235:1615:1392

YES_LDAS

0.0034

1.8295

1.9656

"[""INTRACHROMOSOMAL[chr9:0.22Mb]""]"

chr9:61453030-chr9:61104578

False

Read

count

too

low:

FAIL

CNTNAP3--RNF38

0.25

0.0

ONLY_REF_SPLICE

CNTNAP3^ENSG00000106714.17

chr9:39238993:-

RNF38^ENSG00000137075.18

chr9:36390616:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1190:29364:13639

YES_LDAS

0.0009

1.8323

1.8892

"[""INTRACHROMOSOMAL[chr9:2.59Mb]""]"

chr9:39238993-chr9:36390616

False

Read

count

too

low:

FAIL

CNOT6L--ANXA1

1.0

0.0

INCL_NON_REF_SPLICE

CNOT6L^ENSG00000138767.13

chr4:77819052:-

ANXA1^ENSG00000135046.14

chr9:73168881:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2414:39630:17156

YES_LDAS

0.0034

0.9968

"[""INTERCHROMOSOMAL[chr4--chr9]""]"

chr4:77819052-chr9:73168881

False

Read

count

too

low:

FAIL

CNOT3--RASSF7

0.5

0.0

INCL_NON_REF_SPLICE

CNOT3^ENSG00000088038.19

chr19:54143937:+

RASSF7^ENSG00000099849.15

chr11:563325:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2234:28595:2667

NO_LDAS

0.0017

1.8295

1.4716

"[""INTERCHROMOSOMAL[chr19--chr11]""]"

chr19:54143937-chr11:563325

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CNKSR3--TYW1

1.0

0.0

INCL_NON_REF_SPLICE

CNKSR3^ENSG00000153721.19

chr6:154391000:-

TYW1^ENSG00000198874.13

chr7:67067285:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2209:46029:24344

YES_LDAS

0.0034

1.9329

1.9086

"[""INTERCHROMOSOMAL[chr6--chr7]""]"

chr6:154391000-chr7:67067285

False

Read

count

too

low:

FAIL

CNKSR1--SLX4

1.0

0.0

INCL_NON_REF_SPLICE

CNKSR1^ENSG00000142675.18

chr1:26183830:+

SLX4^ENSG00000188827.11

chr16:3581608:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1304:7561:11439

NO_LDAS

0.0034

1.4566

1.9656

"[""INTERCHROMOSOMAL[chr1--chr16]""]"

chr1:26183830-chr16:3581608

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CNKSR1--NEO1

1.0

0.0

INCL_NON_REF_SPLICE

CNKSR1^ENSG00000142675.18

chr1:26185140:+

NEO1^ENSG00000067141.17

chr15:73052604:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2116:21492:10066

NO_LDAS

0.0034

1.4295

1.371

"[""INTERCHROMOSOMAL[chr1--chr15]""]"

chr1:26185140-chr15:73052604

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CMTM8--CNOT10

1.0

0.0

ONLY_REF_SPLICE

CMTM8^ENSG00000170293.9

chr3:32239119:+

CNOT10^ENSG00000182973.19

chr3:32764682:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1124:48990:11761

YES_LDAS

0.0034

1.9656

1.8323

"[""INTRACHROMOSOMAL[chr3:0.31Mb]""]"

chr3:32239119-chr3:32764682

False

Read

count

too

low:

FAIL

CMC1--GOLM2

1.0

0.0

ONLY_REF_SPLICE

CMC1^ENSG00000187118.14

chr3:28263380:+

GOLM2^ENSG00000166734.20

chr15:44328685:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1112:38125:23742

NO_LDAS

0.0034

1.9219

1.9899

"[""INTERCHROMOSOMAL[chr3--chr15]""]"

chr3:28263380-chr15:44328685

False

Read

count

too

low:

FAIL

CMBL--SEMA5A

1.0

0.0

ONLY_REF_SPLICE

CMBL^ENSG00000164237.9

chr5:10307625:-

SEMA5A^ENSG00000112902.12

chr5:9237890:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2367:33417:16904

YES_LDAS

0.0034

1.5301

1.6729

"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.73Mb]""]"

chr5:10307625-chr5:9237890

False

Read

count

too

low:

FAIL

CLVS1--PLS3

0.5

0.0

ONLY_REF_SPLICE

CLVS1^ENSG00000177182.11

chr8:61465804:+

PLS3^ENSG00000102024.18

chrX:115610243:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2270:12391:11453

NO_LDAS

0.0017

1.9656

1.7819

"[""INTERCHROMOSOMAL[chr8--chrX]""]"

chr8:61465804-chrX:115610243

True

pair|recurrent

breakpoints

Blacklisted

FAIL

CLUL1--NXNL2

1.0

0.0

ONLY_REF_SPLICE

CLUL1^ENSG00000079101.16

chr18:613281:+

NXNL2^ENSG00000130045.16

chr9:88544379:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1262:36604:3536

NO_LDAS

0.0034

1.8892

1.6895

"[""INTERCHROMOSOMAL[chr18--chr9]""]"

chr18:613281-chr9:88544379

False

Read

count

too

low:

FAIL

CLTC--TEX2

1.0

0.0

ONLY_REF_SPLICE

CLTC^ENSG00000141367.12

chr17:59620173:+

TEX2^ENSG00000136478.8

chr17:64214242:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1287:32454:24625

YES_LDAS

0.0034

1.9329

"[""INTRACHROMOSOMAL[chr17:4.45Mb]""]"

chr17:59620173-chr17:64214242

False

Read

count

too

low:

FAIL

CLN5--RPTN

0.5

0.0

INCL_NON_REF_SPLICE

CLN5^ENSG00000102805.16

chr13:77004291:+

RPTN^ENSG00000215853.3

chr1:152156641:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2433:19882:24513

NO_LDAS

0.0017

1.8295

1.8323

"[""INTERCHROMOSOMAL[chr13--chr1]""]"

chr13:77004291-chr1:152156641

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CLN5--RPTN

0.5

0.0

INCL_NON_REF_SPLICE

CLN5^ENSG00000102805.16

chr13:77004291:+

RPTN^ENSG00000215853.3

chr1:152156605:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2433:19882:24513

NO_LDAS

0.0017

1.8295

1.8323

"[""INTERCHROMOSOMAL[chr13--chr1]""]"

chr13:77004291-chr1:152156605

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CLK1--NDUFB3

1.0

0.0

ONLY_REF_SPLICE

CLK1^ENSG00000013441.16

chr2:200864564:-

NDUFB3^ENSG00000119013.9

chr2:201078881:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2272:48731:12966

YES_LDAS

0.0034

1.9329

1.9086

"[""INTRACHROMOSOMAL[chr2:0.21Mb]""]"

chr2:200864564-chr2:201078881

False

Read

count

too

low:

FAIL

CLINT1--EBF1

1.0

0.0

ONLY_REF_SPLICE

CLINT1^ENSG00000113282.14

chr5:157858930:-

EBF1^ENSG00000164330.17

chr5:158731157:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1393:39881:24513

YES_LDAS

0.0034

1.8892

1.6895

"[""INTRACHROMOSOMAL[chr5:0.84Mb]""]"

chr5:157858930-chr5:158731157

False

Read

count

too

low:

FAIL

CLEC12B--XKR8

1.0

0.0

INCL_NON_REF_SPLICE

CLEC12B^ENSG00000256660.6

chr12:10012831:+

XKR8^ENSG00000158156.9

chr1:27966761:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1370:15109:19552

NO_LDAS

0.0034

1.5656

1.9219

"[""INTERCHROMOSOMAL[chr12--chr1]""]"

chr12:10012831-chr1:27966761

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CLCN3P1--ELAPOR1

1.0

0.0

INCL_NON_REF_SPLICE

CLCN3P1^ENSG00000232000.3

chr9:14922758:-

ELAPOR1^ENSG00000116299.17

chr1:109191406:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1477:35172:19160

NO_LDAS

0.0034

1.7465

1.9329

"[""INTERCHROMOSOMAL[chr9--chr1]""]"

chr9:14922758-chr1:109191406

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CKLF--KLHL7

1.0

0.0

ONLY_REF_SPLICE

CKLF^ENSG00000217555.13

chr16:66552793:+

KLHL7^ENSG00000122550.18

chr7:23152067:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1428:29291:14073

NO_LDAS

0.0034

1.9219

1.8892

"[""INTERCHROMOSOMAL[chr16--chr7]""]"

chr16:66552793-chr7:23152067

False

Read

count

too

low:

FAIL

CHST11--SLC37A1

1.0

0.0

ONLY_REF_SPLICE

CHST11^ENSG00000171310.11

chr12:104601991:+

SLC37A1^ENSG00000160190.14

chr21:42534698:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1316:40261:13737

YES_LDAS

0.0034

1.7056

1.9329

"[""INTERCHROMOSOMAL[chr12--chr21]""]"

chr12:104601991-chr21:42534698

False

Read

count

too

low:

FAIL

CHMP4B--NECAB3

1.0

0.0

ONLY_REF_SPLICE

CHMP4B^ENSG00000101421.4

chr20:33811658:+

NECAB3^ENSG00000125967.17

chr20:33660395:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1464:4123:5176

YES_LDAS

0.0034

1.5058

1.7465

"[""INTRACHROMOSOMAL[chr20:0.14Mb]""]"

chr20:33811658-chr20:33660395

False

Read

count

too

low:

FAIL

CHMP4A--TM9SF1

1.0

0.0

ONLY_REF_SPLICE

CHMP4A^ENSG00000254505.11

chr14:24210348:-

TM9SF1^ENSG00000100926.15

chr14:24190591:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1398:3694:28114

YES_LDAS

0.0034

1.6895

1.8295

"[""ChimerSeq"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""NEIGHBORS[13928]""]"

chr14:24210348-chr14:24190591

False

Read

count

too

low:

FAIL

CHKA--PPM1D

1.0

0.0

ONLY_REF_SPLICE

CHKA^ENSG00000110721.12

chr11:68074717:-

PPM1D^ENSG00000170836.12

chr17:60623521:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2494:51482:4727

YES_LDAS

0.0034

1.9656

1.7819

"[""INTERCHROMOSOMAL[chr11--chr17]""]"

chr11:68074717-chr17:60623521

False

Read

count

too

low:

FAIL

CHKA--CXXC5

1.0

0.0

ONLY_REF_SPLICE

CHKA^ENSG00000110721.12

chr11:68120828:-

CXXC5^ENSG00000171604.12

chr5:139679847:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1431:12520:26446

NO_LDAS

0.0034

1.9899

1.9656

"[""INTERCHROMOSOMAL[chr11--chr5]""]"

chr11:68120828-chr5:139679847

False

Read

count

too

low:

FAIL

CHID1--TSPAN4

1.0

0.0

ONLY_REF_SPLICE

CHID1^ENSG00000177830.18

chr11:883148:-

TSPAN4^ENSG00000214063.11

chr11:847201:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1383:13750:25886

YES_LDAS

0.0034

1.7465

1.8256

"[""INTRACHROMOSOMAL[chr11:0.00Mb]"",""LOCAL_INVERSION:-:+:[743]""]"

chr11:883148-chr11:847201

False

Read

count

too

low:

FAIL

CHIC2--FIP1L1

1.0

0.0

ONLY_REF_SPLICE

CHIC2^ENSG00000109220.11

chr4:54064182:-

FIP1L1^ENSG00000145216.16

chr4:53425872:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2345:47202:28870

NO_LDAS

0.0034

1.8892

1.9219

"[""INTRACHROMOSOMAL[chr4:0.55Mb]""]"

chr4:54064182-chr4:53425872

False

Read

count

too

low:

FAIL

CHCHD3--EXOC4

0.5

0.0

ONLY_REF_SPLICE

CHCHD3^ENSG00000106554.13

chr7:133070142:-

EXOC4^ENSG00000131558.15

chr7:133317284:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2286:23231:22999

YES_LDAS

0.0017

1.9329

1.9656

"[""Klijn_CellLines"",""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.17Mb]""]"

chr7:133070142-chr7:133317284

False

Read

count

too

low:

FAIL

CHCHD2--KNSTRN

0.5

0.0

INCL_NON_REF_SPLICE

CHCHD2^ENSG00000106153.13

chr7:56104366:-

KNSTRN^ENSG00000128944.13

chr15:40391503:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1398:28822:24611

YES_LDAS

0.0017

1.3996

1.9656

"[""INTERCHROMOSOMAL[chr7--chr15]""]"

chr7:56104366-chr15:40391503

False

Read

count

too

low:

FAIL

CHAF1A--AC011504.1

1.0

0.0

INCL_NON_REF_SPLICE

CHAF1A^ENSG00000167670.16

chr19:4402814:+

AC011504.1^ENSG00000280061.1

chr19:30557395:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1110:40042:15629

NO_LDAS

0.0034

1.5058

1.9329

"[""INTRACHROMOSOMAL[chr19:26.11Mb]""]"

chr19:4402814-chr19:30557395

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CEP85--TMEM86B

0.25

0.0

INCL_NON_REF_SPLICE

CEP85^ENSG00000130695.16

chr1:26271990:+

TMEM86B^ENSG00000180089.6

chr19:55227438:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1235:33498:16540

NO_LDAS

0.0009

1.8256

1.8892

"[""INTERCHROMOSOMAL[chr1--chr19]""]"

chr1:26271990-chr19:55227438

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CEP68--VWCE

1.0

0.0

ONLY_REF_SPLICE

CEP68^ENSG00000011523.14

chr2:65074404:+

VWCE^ENSG00000167992.13

chr11:61291576:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1101:43521:13275

NO_LDAS

0.0034

1.9329

1.6895

"[""INTERCHROMOSOMAL[chr2--chr11]""]"

chr2:65074404-chr11:61291576

False

Read

count

too

low:

FAIL

CEP43--INPP5D

1.0

0.0

INCL_NON_REF_SPLICE

CEP43^ENSG00000213066.13

chr6:167050279:+

INPP5D^ENSG00000168918.14

chr2:233161724:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1254:40350:20281

YES_LDAS

0.0034

1.9086

1.8323

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:167050279-chr2:233161724

False

Read

count

too

low:

FAIL

CEP41--FLT3LG

1.0

0.0

ONLY_REF_SPLICE

CEP41^ENSG00000106477.20

chr7:130413456:-

FLT3LG^ENSG00000090554.13

chr19:49486015:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1281:21718:24583

NO_LDAS

0.0034

1.8256

1.6402

"[""INTERCHROMOSOMAL[chr7--chr19]""]"

chr7:130413456-chr19:49486015

False

Read

count

too

low:

FAIL

CEP20--TNFRSF14

1.0

0.0

ONLY_REF_SPLICE

CEP20^ENSG00000133393.13

chr16:15873491:-

TNFRSF14^ENSG00000157873.18

chr1:2562865:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2330:29307:4573

NO_LDAS

0.0034

1.6895

1.8062

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:15873491-chr1:2562865

False

Read

count

too

low:

FAIL

CEP192--ST13P3

1.0

0.0

INCL_NON_REF_SPLICE

CEP192^ENSG00000101639.18

chr18:13068237:+

ST13P3^ENSG00000257773.1

chr12:106016878:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2404:4543:2681

NO_LDAS

0.0034

1.8256

1.9899

"[""INTERCHROMOSOMAL[chr18--chr12]""]"

chr18:13068237-chr12:106016878

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CEP164--AC007610.3

1.0

0.0

INCL_NON_REF_SPLICE

CEP164^ENSG00000110274.16

chr11:117397313:+

AC007610.3^ENSG00000261835.1

chr16:50047479:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2382:3200:10725

NO_LDAS

0.0034

1.6895

1.8295

"[""INTERCHROMOSOMAL[chr11--chr16]""]"

chr11:117397313-chr16:50047479

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CEP152--SLC7A3

1.0

0.0

INCL_NON_REF_SPLICE

CEP152^ENSG00000103995.14

chr15:48740616:-

SLC7A3^ENSG00000165349.12

chrX:70925898:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1338:7812:7978

NO_LDAS

0.0034

0.0

1.8295

"[""INTERCHROMOSOMAL[chr15--chrX]""]"

chr15:48740616-chrX:70925898

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CEP126--NUDC

1.0

0.0

INCL_NON_REF_SPLICE

CEP126^ENSG00000110318.15

chr11:101956599:+

NUDC^ENSG00000090273.14

chr1:26941804:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1218:29008:18880

NO_LDAS

0.0034

1.2867

1.8256

"[""INTERCHROMOSOMAL[chr11--chr1]""]"

chr11:101956599-chr1:26941804

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CENPW--CAPRIN2

1.0

0.0

ONLY_REF_SPLICE

CENPW^ENSG00000203760.9

chr6:126346318:+

CAPRIN2^ENSG00000110888.17

chr12:30753559:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2288:25537:11467

YES_LDAS

0.0034

1.8256

1.8892

"[""INTERCHROMOSOMAL[chr6--chr12]""]"

chr6:126346318-chr12:30753559

False

Read

count

too

low:

FAIL

CENPS--CORT

1.0

0.0

INCL_NON_REF_SPLICE

CENPS^ENSG00000175279.22

chr1:10442441:+

CORT^ENSG00000241563.4

chr1:10450165:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1179:1866:26068

YES_LDAS

0.0034

1.9656

1.7465

"[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[7223]""]"

chr1:10442441-chr1:10450165

False

Read

count

too

low:

FAIL

CENPO--FAM228B

1.0

0.0

ONLY_REF_SPLICE

CENPO^ENSG00000138092.11

chr2:24799844:+

FAM228B^ENSG00000219626.9

chr2:24135119:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1481:21104:23882

NO_LDAS

0.0034

1.5058

1.7819

"[""INTRACHROMOSOMAL[chr2:0.62Mb]""]"

chr2:24799844-chr2:24135119

False

Read

count

too

low:

FAIL

CENPI--ZNF236

0.33

0.0

INCL_NON_REF_SPLICE

CENPI^ENSG00000102384.13

chrX:101100700:+

ZNF236^ENSG00000130856.17

chr18:76849622:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1316:31451:23728

NO_LDAS

0.0011

1.8892

1.8256

"[""INTERCHROMOSOMAL[chrX--chr18]""]"

chrX:101100700-chr18:76849622

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CENATAC--RIN2

1.0

0.0

ONLY_REF_SPLICE

CENATAC^ENSG00000186166.9

chr11:118999109:+

RIN2^ENSG00000132669.14

chr20:19935099:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2423:25351:28772

YES_LDAS

0.0034

1.9656

1.8256

"[""INTERCHROMOSOMAL[chr11--chr20]""]"

chr11:118999109-chr20:19935099

False

Read

count

too

low:

FAIL

CEACAMP3--CEACAM6

1.0

0.0

INCL_NON_REF_SPLICE

CEACAMP3^ENSG00000239736.2

chr19:41601509:+

CEACAM6^ENSG00000086548.9

chr19:41756936:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2495:42202:21192

NO_LDAS

0.0034

1.8062

1.8892

"[""INTRACHROMOSOMAL[chr19:0.14Mb]""]"

chr19:41601509-chr19:41756936

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CEACAM6--CEACAMP10

0.2

0.0

ONLY_REF_SPLICE

CEACAM6^ENSG00000086548.9

chr19:41761527:+

CEACAMP10^ENSG00000241104.5

chr19:43220242:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1237:2658:22173

NO_LDAS

0.0007

1.8323

1.9329

"[""INTRACHROMOSOMAL[chr19:1.44Mb]""]"

chr19:41761527-chr19:43220242

False

Read

count

too

low:

FAIL

CDRT1--ING5

1.0

0.0

INCL_NON_REF_SPLICE

CDRT1^ENSG00000241322.11

chr17:15605223:-

ING5^ENSG00000168395.16

chr2:241726979:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1114:31135:18922

YES_LDAS

0.0034

1.9656

1.9329

"[""INTERCHROMOSOMAL[chr17--chr2]""]"

chr17:15605223-chr2:241726979

False

Read

count

too

low:

FAIL

CDRT1--ANAPC16

1.0

0.0

INCL_NON_REF_SPLICE

CDRT1^ENSG00000241322.11

chr17:15605223:-

ANAPC16^ENSG00000166295.9

chr10:72234193:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1144:4220:16273

YES_LDAS

0.0034

1.9656

"[""INTERCHROMOSOMAL[chr17--chr10]""]"

chr17:15605223-chr10:72234193

False

Read

count

too

low:

FAIL

CDKN1A--TMCO3

1.0

0.0

ONLY_REF_SPLICE

CDKN1A^ENSG00000124762.14

chr6:36678798:+

TMCO3^ENSG00000150403.18

chr13:113495502:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1339:42672:10570

NO_LDAS

0.0034

1.7819

1.9329

"[""INTERCHROMOSOMAL[chr6--chr13]""]"

chr6:36678798-chr13:113495502

False

Read

count

too

low:

FAIL

CDKAL1--TNIK

1.0

0.0

ONLY_REF_SPLICE

CDKAL1^ENSG00000145996.11

chr6:21000372:+

TNIK^ENSG00000154310.17

chr3:171126151:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2108:50341:27806

YES_LDAS

0.0034

1.7819

1.9329

"[""INTERCHROMOSOMAL[chr6--chr3]""]"

chr6:21000372-chr3:171126151

False

Read

count

too

low:

FAIL

CDK8--ZDHHC20

1.0

0.0

ONLY_REF_SPLICE

CDK8^ENSG00000132964.12

chr13:26254769:+

ZDHHC20^ENSG00000180776.16

chr13:21413772:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1334:13273:9646

YES_LDAS

0.0034

1.5628

1.7465

"[""INTRACHROMOSOMAL[chr13:4.79Mb]""]"

chr13:26254769-chr13:21413772

False

Read

count

too

low:

FAIL

CDK17--EIF3D

1.0

0.0

ONLY_REF_SPLICE

CDK17^ENSG00000059758.8

chr12:96399986:-

EIF3D^ENSG00000100353.18

chr22:36526131:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1407:30431:24120

NO_LDAS

0.0034

1.5058

1.8256

"[""INTERCHROMOSOMAL[chr12--chr22]""]"

chr12:96399986-chr22:36526131

False

Read

count

too

low:

FAIL

CDK11B--GABRB3

1.0

0.0

INCL_NON_REF_SPLICE

CDK11B^ENSG00000248333.9

chr1:1658920:-

GABRB3^ENSG00000166206.15

chr15:26773064:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1234:4171:28688

YES_LDAS

0.0034

1.231

0.971

"[""INTERCHROMOSOMAL[chr1--chr15]""]"

chr1:1658920-chr15:26773064

False

Read

count

too

low:

FAIL

CDH26--TIAM1

1.0

0.0

ONLY_REF_SPLICE

CDH26^ENSG00000124215.17

chr20:60006787:+

TIAM1^ENSG00000156299.13

chr21:31165065:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2433:11371:8258

YES_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr20--chr21]""]"

chr20:60006787-chr21:31165065

False

Read

count

too

low:

FAIL

CDH24--WASH3P

0.25

0.0

ONLY_REF_SPLICE

CDH24^ENSG00000139880.19

chr14:23052473:-

WASH3P^ENSG00000185596.16

chr15:101973592:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1141:37502:19300

NO_LDAS

0.0009

1.9656

1.5656

"[""INTERCHROMOSOMAL[chr14--chr15]""]"

chr14:23052473-chr15:101973592

False

Read

count

too

low:

FAIL

CDC16--AL589787.1

1.0

0.0

INCL_NON_REF_SPLICE

CDC16^ENSG00000130177.16

chr13:114235132:+

AL589787.1^ENSG00000287326.1

chr10:126438204:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1449:50883:14452

NO_LDAS

0.0034

1.8892

1.5656

"[""INTERCHROMOSOMAL[chr13--chr10]""]"

chr13:114235132-chr10:126438204

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CDC16--AC012414.2

0.5

0.0

INCL_NON_REF_SPLICE

CDC16^ENSG00000130177.16

chr13:114235132:+

AC012414.2^ENSG00000259383.1

chr15:20774685:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2240:38230:17478

NO_LDAS

0.0017

1.8892

1.5656

"[""INTERCHROMOSOMAL[chr13--chr15]""]"

chr13:114235132-chr15:20774685

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CD1D--GREM2

1.0

0.0

INCL_NON_REF_SPLICE

CD1D^ENSG00000158473.8

chr1:158180976:+

GREM2^ENSG00000180875.5

chr1:240493209:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2383:46878:13709

NO_LDAS

0.0034

1.5546

1.6402

"[""INTRACHROMOSOMAL[chr1:82.30Mb]""]"

chr1:158180976-chr1:240493209

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CCNF--HORMAD1

1.0

0.0

INCL_NON_REF_SPLICE

CCNF^ENSG00000162063.13

chr16:2438112:+

HORMAD1^ENSG00000143452.16

chr1:150719490:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2276:41434:5960

NO_LDAS

0.0034

1.8295

1.9656

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:2438112-chr1:150719490

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CCNC--AC114760.2

1.0

0.0

INCL_NON_REF_SPLICE

CCNC^ENSG00000112237.13

chr6:99557729:-

AC114760.2^ENSG00000272211.1

chr2:196154170:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2119:2521:26699

YES_LDAS

0.0034

1.7465

1.9329

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:99557729-chr2:196154170

False

Read

count

too

low:

FAIL

CCM2--CTCF

1.0

0.0

ONLY_REF_SPLICE

CCM2^ENSG00000136280.17

chr7:45000363:+

CTCF^ENSG00000102974.16

chr16:67571148:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1423:20845:10598

YES_LDAS

0.0034

1.2729

1.9656

"[""INTERCHROMOSOMAL[chr7--chr16]""]"

chr7:45000363-chr16:67571148

False

Read

count

too

low:

FAIL

CCDC92--LINC01006

1.0

0.0

ONLY_REF_SPLICE

CCDC92^ENSG00000119242.9

chr12:123972529:-

LINC01006^ENSG00000182648.13

chr7:156605764:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1274:37017:14312

YES_LDAS

0.0034

1.2867

1.9086

"[""INTERCHROMOSOMAL[chr12--chr7]""]"

chr12:123972529-chr7:156605764

False

Read

count

too

low:

FAIL

CCDC66--NAA15

1.0

0.0

INCL_NON_REF_SPLICE

CCDC66^ENSG00000180376.17

chr3:56567053:+

NAA15^ENSG00000164134.13

chr4:139419029:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1231:42930:14101

YES_LDAS

0.0034

1.5628

1.9329

"[""INTERCHROMOSOMAL[chr3--chr4]""]"

chr3:56567053-chr4:139419029

True

pair|recurrent

breakpoints

Blacklisted

FAIL

CCDC32--CBX3

1.0

0.0

INCL_NON_REF_SPLICE

CCDC32^ENSG00000128891.16

chr15:40562772:-

CBX3^ENSG00000122565.19

chr7:26208516:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2169:32907:22131

YES_LDAS

0.0034

1.8892

1.9329

"[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr15--chr7]""]"

chr15:40562772-chr7:26208516

False

Excluded

annotation

pattern:

GTEx_recurrent_StarF2019

FAIL

CCDC22--KRT18P37

1.0

0.0

INCL_NON_REF_SPLICE

CCDC22^ENSG00000101997.13

chrX:49249725:+

KRT18P37^ENSG00000253943.1

chr8:41511831:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2173:32519:4363

NO_LDAS

0.0034

1.8062

1.8323

"[""INTERCHROMOSOMAL[chrX--chr8]""]"

chrX:49249725-chr8:41511831

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CCDC125--EIF1B

1.0

0.0

ONLY_REF_SPLICE

CCDC125^ENSG00000183323.13

chr5:69320465:-

EIF1B^ENSG00000114784.4

chr3:40311470:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1382:16120:19566

YES_LDAS

0.0034

1.7968

1.8323

"[""INTERCHROMOSOMAL[chr5--chr3]""]"

chr5:69320465-chr3:40311470

False

Read

count

too

low:

FAIL

CCDC124--RAP1GAP

0.5

0.0

INCL_NON_REF_SPLICE

CCDC124^ENSG00000007080.11

chr19:17943375:+

RAP1GAP^ENSG00000076864.19

chr1:21599539:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1424:51134:18193

NO_LDAS

0.0017

1.9899

1.7232

"[""INTERCHROMOSOMAL[chr19--chr1]""]"

chr19:17943375-chr1:21599539

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CCDC124--CYP8B1

0.5

0.0

INCL_NON_REF_SPLICE

CCDC124^ENSG00000007080.11

chr19:17943375:+

CYP8B1^ENSG00000180432.6

chr3:42874791:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1424:51134:18193

NO_LDAS

0.0017

1.9899

1.7232

"[""INTERCHROMOSOMAL[chr19--chr3]""]"

chr19:17943375-chr3:42874791

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CC2D2A--MIB1

1.0

0.0

ONLY_REF_SPLICE

CC2D2A^ENSG00000048342.18

chr4:15470057:+

MIB1^ENSG00000101752.12

chr18:21765772:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2116:16322:22663

YES_LDAS

0.0034

1.7819

1.9656

"[""INTERCHROMOSOMAL[chr4--chr18]""]"

chr4:15470057-chr18:21765772

False

Read

count

too

low:

FAIL

CBX5--UBALD2

1.0

0.0

ONLY_REF_SPLICE

CBX5^ENSG00000094916.16

chr12:54280008:-

UBALD2^ENSG00000185262.9

chr17:76270194:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1289:26297:9562

YES_LDAS

0.0034

1.8295

1.9219

"[""INTERCHROMOSOMAL[chr12--chr17]""]"

chr12:54280008-chr17:76270194

False

Read

count

too

low:

FAIL

CBLC--AL589182.2

0.25

0.0

INCL_NON_REF_SPLICE

CBLC^ENSG00000142273.13

chr19:44794281:+

AL589182.2^ENSG00000278594.1

chr14:19131981:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1474:11040:28955

YES_LDAS

0.0009

1.8256

1.9656

"[""INTERCHROMOSOMAL[chr19--chr14]""]"

chr19:44794281-chr14:19131981

False

Read

count

too

low:

FAIL

CBFB--DANCR

1.0

0.0

INCL_NON_REF_SPLICE

CBFB^ENSG00000067955.15

chr16:67066798:+

DANCR^ENSG00000226950.8

chr4:52722970:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2362:29817:1981

NO_LDAS

0.0034

1.5301

1.8062

"[""INTERCHROMOSOMAL[chr16--chr4]""]"

chr16:67066798-chr4:52722970

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CASP9--ZNF880

1.0

0.0

ONLY_REF_SPLICE

CASP9^ENSG00000132906.18

chr1:15524069:-

ZNF880^ENSG00000221923.9

chr19:52374484:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2226:42841:23420

NO_LDAS

0.0034

1.9329

1.8062

"[""INTERCHROMOSOMAL[chr1--chr19]""]"

chr1:15524069-chr19:52374484

False

Read

count

too

low:

FAIL

CASP10--RN7SL795P

0.2

0.0

INCL_NON_REF_SPLICE

CASP10^ENSG00000003400.15

chr2:201218330:+

RN7SL795P^ENSG00000239748.3

chr18:70512800:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1322:39371:23125

YES_LDAS

0.0007

1.8892

1.8323

"[""INTERCHROMOSOMAL[chr2--chr18]""]"

chr2:201218330-chr18:70512800

False

Read

count

too

low:

FAIL

CASC4P1--RAB3IL1

0.5

0.0

INCL_NON_REF_SPLICE

CASC4P1^ENSG00000238132.2

chr13:19564661:-

RAB3IL1^ENSG00000167994.13

chr11:61904832:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2473:49467:21276

YES_LDAS

0.0017

1.4566

1.9329

"[""INTERCHROMOSOMAL[chr13--chr11]""]"

chr13:19564661-chr11:61904832

False

Read

count

too

low:

FAIL

CARD8--CAPN8

1.0

0.0

ONLY_REF_SPLICE

CARD8^ENSG00000105483.18

chr19:48203844:-

CAPN8^ENSG00000203697.12

chr1:223622900:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1430:41749:24162

YES_LDAS

0.0034

1.7232

1.9656

"[""INTERCHROMOSOMAL[chr19--chr1]""]"

chr19:48203844-chr1:223622900

False

Read

count

too

low:

FAIL

CAPG--CUL9

1.0

0.0

INCL_NON_REF_SPLICE

CAPG^ENSG00000042493.16

chr2:85399136:-

CUL9^ENSG00000112659.14

chr6:43203450:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2242:20594:19664

NO_LDAS

0.0034

1.9656

1.9086

"[""INTERCHROMOSOMAL[chr2--chr6]""]"

chr2:85399136-chr6:43203450

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CAMLG--CRACR2A

1.0

0.0

INCL_NON_REF_SPLICE

CAMLG^ENSG00000164615.6

chr5:134744548:+

CRACR2A^ENSG00000130038.10

chr12:3728168:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2126:14931:25185

NO_LDAS

0.0034

0.3534

1.7465

"[""INTERCHROMOSOMAL[chr5--chr12]""]"

chr5:134744548-chr12:3728168

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CALCOCO2--PVR

1.0

0.0

INCL_NON_REF_SPLICE

CALCOCO2^ENSG00000136436.15

chr17:48864206:+

PVR^ENSG00000073008.15

chr19:44661292:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1433:22600:16133

YES_LDAS

0.0034

1.9329

"[""INTERCHROMOSOMAL[chr17--chr19]""]"

chr17:48864206-chr19:44661292

False

Read

count

too

low:

FAIL

CALCOCO1--AC007106.2

1.0

0.0

INCL_NON_REF_SPLICE

CALCOCO1^ENSG00000012822.16

chr12:53721951:-

AC007106.2^ENSG00000287389.1

chr4:27942558:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1407:22228:17647

NO_LDAS

0.0034

1.7819

1.5301

"[""INTERCHROMOSOMAL[chr12--chr4]""]"

chr12:53721951-chr4:27942558

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CAD--ATRAID

1.0

0.0

ONLY_REF_SPLICE

CAD^ENSG00000084774.14

chr2:27218016:+

ATRAID^ENSG00000138085.17

chr2:27215321:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1361:3565:26460

YES_LDAS

0.0034

1.9329

1.9899

"[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[191]""]"

chr2:27218016-chr2:27215321

True

pair|recurrent

breakpoints

Blacklisted

FAIL

CAAP1--ANKRD36B

1.0

0.0

INCL_NON_REF_SPLICE

CAAP1^ENSG00000120159.13

chr9:26892451:-

ANKRD36B^ENSG00000196912.12

chr2:97589718:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1159:38724:4741

NO_LDAS

0.0034

1.4566

1.5058

"[""INTERCHROMOSOMAL[chr9--chr2]""]"

chr9:26892451-chr2:97589718

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

C9orf85--AL583829.1

1.0

0.0

ONLY_REF_SPLICE

C9orf85^ENSG00000155621.15

chr9:71911836:+

AL583829.1^ENSG00000286823.1

chr9:72064429:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2116:37623:24190

YES_LDAS

0.0034

1.9086

"[""INTRACHROMOSOMAL[chr9:0.07Mb]"",""NEIGHBORS[74522]""]"

chr9:71911836-chr9:72064429

False

Read

count

too

low:

FAIL

C22orf34--ATF7IP

1.0

0.0

ONLY_REF_SPLICE

C22orf34^ENSG00000188511.12

chr22:49657405:-

ATF7IP^ENSG00000171681.12

chr12:14423909:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1236:10215:18333

YES_LDAS

0.0034

1.9086

1.8892

"[""INTERCHROMOSOMAL[chr22--chr12]""]"

chr22:49657405-chr12:14423909

False

Read

count

too

low:

FAIL

C1orf21--UCHL5

1.0

0.0

ONLY_REF_SPLICE

C1orf21^ENSG00000116667.15

chr1:184387368:+

UCHL5^ENSG00000116750.14

chr1:193029657:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2422:46531:3018

YES_LDAS

0.0034

1.5301

1.7056

"[""INTRACHROMOSOMAL[chr1:8.38Mb]""]"

chr1:184387368-chr1:193029657

False

Read

count

too

low:

FAIL

C1orf198--RYR2

1.0

0.0

ONLY_REF_SPLICE

C1orf198^ENSG00000119280.17

chr1:230843354:-

RYR2^ENSG00000198626.17

chr1:237469092:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1257:20554:27665

YES_LDAS

0.0034

1.9656

1.9899

"[""INTRACHROMOSOMAL[chr1:6.17Mb]""]"

chr1:230843354-chr1:237469092

False

Read

count

too

low:

FAIL

C1orf159--H3P16

0.5

0.0

INCL_NON_REF_SPLICE

C1orf159^ENSG00000131591.18

chr1:1084080:-

H3P16^ENSG00000178458.5

chr4:139698584:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2169:35836:25353

NO_LDAS

0.0017

1.8892

1.4295

"[""INTERCHROMOSOMAL[chr1--chr4]""]"

chr1:1084080-chr4:139698584

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

C1orf116--CYP4F3

1.0

0.0

ONLY_REF_SPLICE

C1orf116^ENSG00000182795.13

chr1:207032579:-

CYP4F3^ENSG00000186529.16

chr19:15652823:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1177:38829:13163

YES_LDAS

0.0034

1.8062

1.7819

"[""INTERCHROMOSOMAL[chr1--chr19]""]"

chr1:207032579-chr19:15652823

False

Read

count

too

low:

FAIL

C1orf109--LINC01970

1.0

0.0

INCL_NON_REF_SPLICE

C1orf109^ENSG00000116922.14

chr1:37690216:-

LINC01970^ENSG00000265692.1

chr17:82291260:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1367:49411:20085

YES_LDAS

0.0034

1.8892

1.8295

"[""INTERCHROMOSOMAL[chr1--chr17]""]"

chr1:37690216-chr17:82291260

False

Read

count

too

low:

FAIL

C1RL--PDE1C

1.0

0.0

ONLY_REF_SPLICE

C1RL^ENSG00000139178.11

chr12:7108251:-

PDE1C^ENSG00000154678.18

chr7:31816154:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1126:18102:20673

YES_LDAS

0.0034

1.9656

1.4295

"[""INTERCHROMOSOMAL[chr12--chr7]""]"

chr12:7108251-chr7:31816154

False

Read

count

too

low:

FAIL

C1QTNF1-AS1--RNF157

1.0

0.0

ONLY_REF_SPLICE

C1QTNF1-AS1^ENSG00000265096.2

chr17:79027376:-

RNF157^ENSG00000141576.16

chr17:76212482:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2116:18224:6058

YES_LDAS

0.0034

1.9656

"[""INTRACHROMOSOMAL[chr17:2.78Mb]""]"

chr17:79027376-chr17:76212482

False

Read

count

too

low:

FAIL

C1QC--MAF1

1.0

0.0

INCL_NON_REF_SPLICE

C1QC^ENSG00000159189.12

chr1:22647837:+

MAF1^ENSG00000179632.10

chr8:144107208:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2370:27179:7418

YES_LDAS

0.0034

1.6402

1.7968

"[""INTERCHROMOSOMAL[chr1--chr8]""]"

chr1:22647837-chr8:144107208

False

Read

count

too

low:

FAIL

C1QBP--AL365217.1

0.33

0.0

INCL_NON_REF_SPLICE

C1QBP^ENSG00000108561.8

chr17:5438260:-

AL365217.1^ENSG00000214558.4

chr6:65304107:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2353:26467:4251

NO_LDAS

0.0011

1.9329

1.8295

"[""INTERCHROMOSOMAL[chr17--chr6]""]"

chr17:5438260-chr6:65304107

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

C1D--BLOC1S2

0.5

0.0

INCL_NON_REF_SPLICE

C1D^ENSG00000197223.12

chr2:68047186:-

BLOC1S2^ENSG00000196072.12

chr10:100275485:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2388:2189:25283

NO_LDAS

0.0017

1.7819

1.8323

"[""INTERCHROMOSOMAL[chr2--chr10]""]"

chr2:68047186-chr10:100275485

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

C19orf25--TMEM74B

1.0

0.0

ONLY_REF_SPLICE

C19orf25^ENSG00000119559.17

chr19:1478774:-

TMEM74B^ENSG00000125895.5

chr20:1181587:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1425:40455:9758

YES_LDAS

0.0034

1.8323

1.8256

"[""INTERCHROMOSOMAL[chr19--chr20]""]"

chr19:1478774-chr20:1181587

False

Read

count

too

low:

FAIL

C17orf75--ZNF525

1.0

0.0

INCL_NON_REF_SPLICE

C17orf75^ENSG00000108666.10

chr17:32329070:-

ZNF525^ENSG00000203326.12

chr19:53382873:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2426:29040:10612

NO_LDAS

0.0034

0.0

1.8892

"[""INTERCHROMOSOMAL[chr17--chr19]""]"

chr17:32329070-chr19:53382873

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

C16orf72--CDK17

1.0

0.0

ONLY_REF_SPLICE

C16orf72^ENSG00000182831.12

chr16:9103259:+

CDK17^ENSG00000059758.8

chr12:96324112:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1122:7828:14003

NO_LDAS

0.0034

1.9656

1.9329

"[""INTERCHROMOSOMAL[chr16--chr12]""]"

chr16:9103259-chr12:96324112

False

Read

count

too

low:

FAIL

C15orf40--RASSF7

0.5

0.0

INCL_NON_REF_SPLICE

C15orf40^ENSG00000169609.14

chr15:83000426:-

RASSF7^ENSG00000099849.15

chr11:563325:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2234:28595:2667

NO_LDAS

0.0017

1.9219

1.4716

"[""INTERCHROMOSOMAL[chr15--chr11]""]"

chr15:83000426-chr11:563325

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

C11orf54--IL6-AS1

1.0

0.0

INCL_NON_REF_SPLICE

C11orf54^ENSG00000182919.15

chr11:93759843:+

IL6-AS1^ENSG00000179428.2

chr7:22725978:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1401:5975:22481

NO_LDAS

0.0034

1.7232

1.8892

"[""INTERCHROMOSOMAL[chr11--chr7]""]"

chr11:93759843-chr7:22725978

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BUD23--HNF1A

0.5

0.0

INCL_NON_REF_SPLICE

BUD23^ENSG00000071462.12

chr7:73704221:+

HNF1A^ENSG00000135100.18

chr12:120999606:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2287:15845:25928

NO_LDAS

0.0017

1.9329

1.6895

"[""INTERCHROMOSOMAL[chr7--chr12]""]"

chr7:73704221-chr12:120999606

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BUB1B--CRX

1.0

0.0

INCL_NON_REF_SPLICE

BUB1B^ENSG00000156970.13

chr15:40187079:+

CRX^ENSG00000105392.16

chr19:47840454:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1448:35439:17240

YES_LDAS

0.0034

1.8062

1.9656

"[""INTERCHROMOSOMAL[chr15--chr19]""]"

chr15:40187079-chr19:47840454

False

Read

count

too

low:

FAIL

BTG3--ASB1

1.0

0.0

ONLY_REF_SPLICE

BTG3^ENSG00000154640.15

chr21:17612699:-

ASB1^ENSG00000065802.12

chr2:238435711:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1101:2934:24078

YES_LDAS

0.0034

1.231

1.7819

"[""INTERCHROMOSOMAL[chr21--chr2]""]"

chr21:17612699-chr2:238435711

False

Read

count

too

low:

FAIL

BTBD7--EIF3J

1.0

0.0

INCL_NON_REF_SPLICE

BTBD7^ENSG00000011114.15

chr14:93332940:-

EIF3J^ENSG00000104131.13

chr15:44537195:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2481:42251:18838

NO_LDAS

0.0034

0.9183

1.4716

"[""INTERCHROMOSOMAL[chr14--chr15]""]"

chr14:93332940-chr15:44537195

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BTBD6P1--OR51A6P

0.5

0.0

INCL_NON_REF_SPLICE

BTBD6P1^ENSG00000229106.1

chr1:23902231:-

OR51A6P^ENSG00000197023.6

chr11:4889830:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1367:3985:6367

NO_LDAS

0.0017

1.9329

1.8295

"[""INTERCHROMOSOMAL[chr1--chr11]""]"

chr1:23902231-chr11:4889830

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BTBD6P1--EIF3KP3

0.5

0.0

INCL_NON_REF_SPLICE

BTBD6P1^ENSG00000229106.1

chr1:23902231:-

EIF3KP3^ENSG00000250442.1

chr4:116043837:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1367:3985:6367

NO_LDAS

0.0017

1.9329

1.7232

"[""INTERCHROMOSOMAL[chr1--chr4]""]"

chr1:23902231-chr4:116043837

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BTAF1--APIP

1.0

0.0

INCL_NON_REF_SPLICE

BTAF1^ENSG00000095564.14

chr10:91953873:+

APIP^ENSG00000149089.13

chr11:34855986:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2468:48771:21920

NO_LDAS

0.0034

1.6402

1.8892

"[""INTERCHROMOSOMAL[chr10--chr11]""]"

chr10:91953873-chr11:34855986

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BSDC1--AC092287.1

1.0

0.0

ONLY_REF_SPLICE

BSDC1^ENSG00000160058.19

chr1:32368447:-

AC092287.1^ENSG00000260352.1

chr16:18936856:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2111:30804:18627

YES_LDAS

0.0034

1.7968

1.8892

"[""INTERCHROMOSOMAL[chr1--chr16]""]"

chr1:32368447-chr16:18936856

False

Read

count

too

low:

FAIL

BRINP2--RPL29

1.0

0.0

INCL_NON_REF_SPLICE

BRINP2^ENSG00000198797.7

chr1:177280658:+

RPL29^ENSG00000162244.12

chr3:51993856:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1154:38190:6563

NO_LDAS

0.0034

1.8323

1.5656

"[""INTERCHROMOSOMAL[chr1--chr3]""]"

chr1:177280658-chr3:51993856

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

BRCA1--NUP107

1.0

0.0

ONLY_REF_SPLICE

BRCA1^ENSG00000012048.23

chr17:43090944:-

NUP107^ENSG00000111581.10

chr12:68715627:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2134:31710:13723

YES_LDAS

0.0034

1.8256

1.8295

"[""INTERCHROMOSOMAL[chr17--chr12]""]"

chr17:43090944-chr12:68715627

False

Read

count

too

low:

FAIL

BMS1P1--POGK

1.0

0.0

INCL_NON_REF_SPLICE

BMS1P1^ENSG00000204177.10

chr10:46810381:+

POGK^ENSG00000143157.12

chr1:166850092:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1207:18046:29067

NO_LDAS

0.0034

1.7819

1.6895

"[""INTERCHROMOSOMAL[chr10--chr1]""]"

chr10:46810381-chr1:166850092

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BMPER--PLEKHA8

0.33

0.0

ONLY_REF_SPLICE

BMPER^ENSG00000164619.10

chr7:33944308:+

PLEKHA8^ENSG00000106086.20

chr7:30045085:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1228:24170:16974

NO_LDAS

0.0011

1.9329

"[""INTRACHROMOSOMAL[chr7:3.77Mb]""]"

chr7:33944308-chr7:30045085

False

Read

count

too

low:

FAIL

BLK--VAC14

1.0

0.0

INCL_NON_REF_SPLICE

BLK^ENSG00000136573.14

chr8:11509166:+

VAC14^ENSG00000103043.15

chr16:70780939:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1444:36313:16568

NO_LDAS

0.0034

1.6895

1.8323

"[""INTERCHROMOSOMAL[chr8--chr16]""]"

chr8:11509166-chr16:70780939

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BIVM--CAMK1

0.5

0.0

INCL_NON_REF_SPLICE

BIVM^ENSG00000134897.14

chr13:102800735:+

CAMK1^ENSG00000134072.11

chr3:9760233:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2396:43206:11159

NO_LDAS

0.0017

1.8323

1.5219

"[""INTERCHROMOSOMAL[chr13--chr3]""]"

chr13:102800735-chr3:9760233

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BIVM--AMYH02020865.1

0.5

0.0

ONLY_REF_SPLICE

BIVM^ENSG00000134897.14

chr13:102800735:+

AMYH02020865.1^ENSG00000184906.11

chr9:40566334:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2396:43206:11159

NO_LDAS

0.0017

1.8323

1.5219

"[""INTERCHROMOSOMAL[chr13--chr9]""]"

chr13:102800735-chr9:40566334

False

Read

count

too

low:

FAIL

BHLHE22--SKIV2L

0.33

0.0

INCL_NON_REF_SPLICE

BHLHE22^ENSG00000180828.3

chr8:64581409:+

SKIV2L^ENSG00000204351.12

chr6:31969349:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2277:51563:12210

NO_LDAS

0.0011

0.8366

1.8062

"[""INTERCHROMOSOMAL[chr8--chr6]""]"

chr8:64581409-chr6:31969349

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BECN1--CFAP70

1.0

0.0

INCL_NON_REF_SPLICE

BECN1^ENSG00000126581.13

chr17:42823748:-

CFAP70^ENSG00000156042.18

chr10:73345210:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1456:15141:25213

NO_LDAS

0.0034

1.9086

1.9329

"[""INTERCHROMOSOMAL[chr17--chr10]""]"

chr17:42823748-chr10:73345210

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BCO2--SDHD

1.0

0.0

ONLY_REF_SPLICE

BCO2^ENSG00000197580.13

chr11:112194755:+

SDHD^ENSG00000204370.13

chr11:112107545:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2473:43392:8903

NO_LDAS

0.0034

1.9329

1.4256

"[""INTRACHROMOSOMAL[chr11:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[55494]""]"

chr11:112194755-chr11:112107545

False

Read

count

too

low:

FAIL

BCL7C--AP000350.7

1.0

0.0

INCL_NON_REF_SPLICE

BCL7C^ENSG00000099385.12

chr16:30888860:-

AP000350.7^ENSG00000279467.1

chr22:23869182:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1167:1510:22229

NO_LDAS

0.0034

1.9219

1.9656

"[""INTERCHROMOSOMAL[chr16--chr22]""]"

chr16:30888860-chr22:23869182

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BCKDHB--AL359715.1

1.0

0.0

ONLY_REF_SPLICE

BCKDHB^ENSG00000083123.15

chr6:80273221:+

AL359715.1^ENSG00000233967.7

chr6:80462872:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2329:36402:22074

NO_LDAS

0.0034

1.9899

1.8256

"[""INTRACHROMOSOMAL[chr6:0.10Mb]"",""NEIGHBORS[95025]""]"

chr6:80273221-chr6:80462872

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

BCAT1--CCDC91

1.0

0.0

ONLY_REF_SPLICE

BCAT1^ENSG00000060982.15

chr12:24948927:-

CCDC91^ENSG00000123106.10

chr12:28257202:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1213:42032:9828

NO_LDAS

0.0034

1.6895

1.9656

"[""INTRACHROMOSOMAL[chr12:3.18Mb]""]"

chr12:24948927-chr12:28257202

False

Read

count

too

low:

FAIL

BAZ1B--NAPEPLD

1.0

0.0

ONLY_REF_SPLICE

BAZ1B^ENSG00000009954.11

chr7:73470345:-

NAPEPLD^ENSG00000161048.12

chr7:103128792:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1102:37178:17871

YES_LDAS

0.0034

1.8295

1.9329

"[""INTRACHROMOSOMAL[chr7:29.58Mb]""]"

chr7:73470345-chr7:103128792

False

Read

count

too

low:

FAIL

BARX2--BX323046.2

0.33

0.0

INCL_NON_REF_SPLICE

BARX2^ENSG00000043039.7

chr11:129438343:+

BX323046.2^ENSG00000287601.1

chr1:244835001:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1450:23425:1645

NO_LDAS

0.0011

0.0

1.9086

"[""INTERCHROMOSOMAL[chr11--chr1]""]"

chr11:129438343-chr1:244835001

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

BANP--SNX29P1

0.5

0.0

ONLY_REF_SPLICE

BANP^ENSG00000172530.20

chr16:88035394:+

SNX29P1^ENSG00000158482.10

chr16:21376648:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2406:43570:26642

YES_LDAS

0.0017

1.5656

1.8256

"[""INTRACHROMOSOMAL[chr16:66.56Mb]""]"

chr16:88035394-chr16:21376648

True

aih_curated_blacklist

score(5)

aih_curated_blacklist

score(5)

FAIL

BAIAP2L1--VCP

1.0

0.0

ONLY_REF_SPLICE

BAIAP2L1^ENSG00000006453.14

chr7:98400802:-

VCP^ENSG00000165280.18

chr9:35068362:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2471:6987:28716

YES_LDAS

0.0034

1.8256

1.8062

"[""INTERCHROMOSOMAL[chr7--chr9]""]"

chr7:98400802-chr9:35068362

False

Read

count

too

low:

FAIL

BABAM1--FZD2

1.0

0.0

INCL_NON_REF_SPLICE

BABAM1^ENSG00000105393.16

chr19:17268938:+

FZD2^ENSG00000180340.7

chr17:44557586:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1406:15489:22369

NO_LDAS

0.0034

1.5058

1.4295

"[""INTERCHROMOSOMAL[chr19--chr17]""]"

chr19:17268938-chr17:44557586

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

B4GALNT3--CRACR2A

1.0

0.0

ONLY_REF_SPLICE

B4GALNT3^ENSG00000139044.12

chr12:460545:+

CRACR2A^ENSG00000130038.10

chr12:3713317:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1236:3063:6507

YES_LDAS

0.0034

1.7465

1.9329

"[""INTRACHROMOSOMAL[chr12:3.04Mb]""]"

chr12:460545-chr12:3713317

False

Read

count

too

low:

FAIL

B4GALNT3--AL035427.2

1.0

0.0

INCL_NON_REF_SPLICE

B4GALNT3^ENSG00000139044.12

chr12:549912:+

AL035427.2^ENSG00000286327.1

chrX:102660337:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1330:12739:23490

NO_LDAS

0.0034

1.8892

1.7465

"[""INTERCHROMOSOMAL[chr12--chrX]""]"

chr12:549912-chrX:102660337

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AZIN1--PHACTR2

1.0

0.0

ONLY_REF_SPLICE

AZIN1^ENSG00000155096.14

chr8:102858013:-

PHACTR2^ENSG00000112419.14

chr6:143712016:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2417:33991:2597

YES_LDAS

0.0034

1.7819

1.9656

"[""INTERCHROMOSOMAL[chr8--chr6]""]"

chr8:102858013-chr6:143712016

False

Read

count

too

low:

FAIL

AUH--AL158071.3

1.0

0.0

ONLY_REF_SPLICE

AUH^ENSG00000148090.12

chr9:91296021:-

AL158071.3^ENSG00000237422.2

chr9:91098548:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1166:36280:24134

YES_LDAS

0.0034

1.8323

1.7968

"[""INTRACHROMOSOMAL[chr9:0.05Mb]"",""NEIGHBORS[50728]""]"

chr9:91296021-chr9:91098548

False

Read

count

too

low:

FAIL

ATP8A2--LINC02179

1.0

0.0

INCL_NON_REF_SPLICE

ATP8A2^ENSG00000132932.18

chr13:26020333:+

LINC02179^ENSG00000261623.1

chr16:49467785:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1254:33481:6955

NO_LDAS

0.0034

0.9968

"[""INTERCHROMOSOMAL[chr13--chr16]""]"

chr13:26020333-chr16:49467785

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ATP6V1E2--PLVAP

1.0

0.0

INCL_NON_REF_SPLICE

ATP6V1E2^ENSG00000250565.7

chr2:46536611:-

PLVAP^ENSG00000130300.9

chr19:17365843:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1446:33279:20141

NO_LDAS

0.0034

1.9656

1.5656

"[""INTERCHROMOSOMAL[chr2--chr19]""]"

chr2:46536611-chr19:17365843

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ATP6V1E2--GRB10

1.0

0.0

ONLY_REF_SPLICE

ATP6V1E2^ENSG00000250565.7

chr2:46535813:-

GRB10^ENSG00000106070.20

chr7:50674658:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1274:28546:15615

YES_LDAS

0.0034

1.9086

1.8892

"[""INTERCHROMOSOMAL[chr2--chr7]""]"

chr2:46535813-chr7:50674658

False

Read

count

too

low:

FAIL

ATP6V1D--TTC37

1.0

0.0

ONLY_REF_SPLICE

ATP6V1D^ENSG00000100554.12

chr14:67359658:-

TTC37^ENSG00000198677.12

chr5:95495017:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2185:51700:13821

YES_LDAS

0.0034

1.8323

1.7465

"[""INTERCHROMOSOMAL[chr14--chr5]""]"

chr14:67359658-chr5:95495017

False

Read

count

too

low:

FAIL

ATP6V0A2--HS6ST2

1.0

0.0

INCL_NON_REF_SPLICE

ATP6V0A2^ENSG00000185344.15

chr12:123752379:+

HS6ST2^ENSG00000171004.18

chrX:132628236:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1251:44945:21962

NO_LDAS

0.0034

1.5058

1.7465

"[""INTERCHROMOSOMAL[chr12--chrX]""]"

chr12:123752379-chrX:132628236

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ATP5PD--ISLR

1.0

0.0

INCL_NON_REF_SPLICE

ATP5PD^ENSG00000167863.12

chr17:75041860:-

ISLR^ENSG00000129009.13

chr15:74174854:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2260:25440:25592

YES_LDAS

0.0034

1.6895

1.8256

"[""INTERCHROMOSOMAL[chr17--chr15]""]"

chr17:75041860-chr15:74174854

False

Read

count

too

low:

FAIL

ATP5F1C--GBP3

1.0

0.0

ONLY_REF_SPLICE

ATP5F1C^ENSG00000165629.20

chr10:7802854:+

GBP3^ENSG00000117226.12

chr1:89015414:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1329:47299:9730

YES_LDAS

0.0034

1.8256

1.5656

"[""INTERCHROMOSOMAL[chr10--chr1]""]"

chr10:7802854-chr1:89015414

False

Read

count

too

low:

FAIL

ATP11C--WWTR1

1.0

0.0

ONLY_REF_SPLICE

ATP11C^ENSG00000101974.14

chrX:139932016:-

WWTR1^ENSG00000018408.15

chr3:149573000:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2151:3403:11691

NO_LDAS

0.0034

1.8295

1.5546

"[""INTERCHROMOSOMAL[chrX--chr3]""]"

chrX:139932016-chr3:149573000

False

Read

count

too

low:

FAIL

ATP11C--THSD7A

1.0

0.0

ONLY_REF_SPLICE

ATP11C^ENSG00000101974.14

chrX:139932016:-

THSD7A^ENSG00000005108.16

chr7:11481982:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2208:5142:10416

YES_LDAS

0.0034

1.8295

1.6895

"[""INTERCHROMOSOMAL[chrX--chr7]""]"

chrX:139932016-chr7:11481982

False

Read

count

too

low:

FAIL

ATP11C--AMMECR1

1.0

0.0

ONLY_REF_SPLICE

ATP11C^ENSG00000101974.14

chrX:139932016:-

AMMECR1^ENSG00000101935.11

chrX:110216632:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2196:29833:5036

NO_LDAS

0.0034

1.8295

1.9656

"[""INTRACHROMOSOMAL[chrX:29.29Mb]""]"

chrX:139932016-chrX:110216632

False

Read

count

too

low:

FAIL

ATM--STEAP3-AS1

1.0

0.0

INCL_NON_REF_SPLICE

ATM^ENSG00000149311.19

chr11:108230736:+

STEAP3-AS1^ENSG00000229867.2

chr2:119245845:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1144:21379:21136

NO_LDAS

0.0034

1.8062

1.9656

"[""INTERCHROMOSOMAL[chr11--chr2]""]"

chr11:108230736-chr2:119245845

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ATL3--SUSD1

1.0

0.0

INCL_NON_REF_SPLICE

ATL3^ENSG00000184743.13

chr11:63658761:-

SUSD1^ENSG00000106868.17

chr9:112058546:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2293:32454:29249

NO_LDAS

0.0034

1.6895

1.9086

"[""INTERCHROMOSOMAL[chr11--chr9]""]"

chr11:63658761-chr9:112058546

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ATG9A--YTHDF1P1

1.0

0.0

INCL_NON_REF_SPLICE

ATG9A^ENSG00000198925.12

chr2:219222050:-

YTHDF1P1^ENSG00000251389.1

chr5:97370022:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2335:4139:23252

NO_LDAS

0.0034

1.9329

1.8323

"[""INTERCHROMOSOMAL[chr2--chr5]""]"

chr2:219222050-chr5:97370022

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ATAT1--FZD10-AS1

1.0

0.0

ONLY_REF_SPLICE

ATAT1^ENSG00000137343.18

chr6:30643011:+

FZD10-AS1^ENSG00000250208.6

chr12:130155782:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2383:35237:28912

NO_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr6--chr12]""]"

chr6:30643011-chr12:130155782

False

Read

count

too

low:

FAIL

ASPH--AP001830.1

1.0

0.0

INCL_NON_REF_SPLICE

ASPH^ENSG00000198363.18

chr8:61555924:-

AP001830.1^ENSG00000255337.1

chr11:102461612:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1343:23862:15685

NO_LDAS

0.0034

1.7819

1.6402

"[""INTERCHROMOSOMAL[chr8--chr11]""]"

chr8:61555924-chr11:102461612

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ASPG--LRRC14

1.0

0.0

INCL_NON_REF_SPLICE

ASPG^ENSG00000166183.16

chr14:104112713:+

LRRC14^ENSG00000160959.8

chr8:144519701:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1286:35528:14144

YES_LDAS

0.0034

1.6402

1.5219

"[""INTERCHROMOSOMAL[chr14--chr8]""]"

chr14:104112713-chr8:144519701

False

Read

count

too

low:

FAIL

ASPG--GSK3B

1.0

0.0

INCL_NON_REF_SPLICE

ASPG^ENSG00000166183.16

chr14:104106825:+

GSK3B^ENSG00000082701.17

chr3:120094436:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1411:15861:20491

YES_LDAS

0.0034

1.9086

1.6895

"[""INTERCHROMOSOMAL[chr14--chr3]""]"

chr14:104106825-chr3:120094436

False

Read

count

too

low:

FAIL

ASMTL-AS1--STARD5

1.0

0.0

INCL_NON_REF_SPLICE

ASMTL-AS1^ENSG00000236017.8

chrX:1412966:+

STARD5^ENSG00000172345.14

chr15:81323988:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1120:31216:20407

NO_LDAS

0.0034

1.2867

1.4256

"[""INTERCHROMOSOMAL[chrY--chr15]""]"

chrX:1412966-chr15:81323988

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ASB1--PSMD2

1.0

0.0

INCL_NON_REF_SPLICE

ASB1^ENSG00000065802.12

chr2:238446803:+

PSMD2^ENSG00000175166.17

chr3:184299303:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1397:13305:22060

YES_LDAS

0.0034

1.8295

1.7232

"[""INTERCHROMOSOMAL[chr2--chr3]""]"

chr2:238446803-chr3:184299303

False

Read

count

too

low:

FAIL

ASAP3--HAND2-AS1

1.0

0.0

INCL_NON_REF_SPLICE

ASAP3^ENSG00000088280.19

chr1:23431707:-

HAND2-AS1^ENSG00000237125.11

chr4:173538073:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1142:19308:7011

NO_LDAS

0.0034

1.9219

1.4566

"[""INTERCHROMOSOMAL[chr1--chr4]""]"

chr1:23431707-chr4:173538073

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ARPC1A--OAS3

1.0

0.0

INCL_NON_REF_SPLICE

ARPC1A^ENSG00000241685.10

chr7:99359455:+

OAS3^ENSG00000111331.14

chr12:112975511:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1275:31637:23826

NO_LDAS

0.0034

0.3534

1.7056

"[""INTERCHROMOSOMAL[chr7--chr12]""]"

chr7:99359455-chr12:112975511

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ARMCX4--KMT2A

1.0

0.0

INCL_NON_REF_SPLICE

ARMCX4^ENSG00000196440.11

chrX:101488739:+

KMT2A^ENSG00000118058.23

chr11:118505037:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1334:47550:8595

YES_LDAS

0.0034

1.7819

1.8892

"[""INTERCHROMOSOMAL[chrX--chr11]""]"

chrX:101488739-chr11:118505037

False

Read

count

too

low:

FAIL

ARL5B--ARL5A

1.0

0.0

ONLY_REF_SPLICE

ARL5B^ENSG00000165997.5

chr10:18659683:+

ARL5A^ENSG00000162980.17

chr2:151815199:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2230:34679:9449

YES_LDAS

0.0034

1.9329

1.8295

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr10--chr2]""]"

chr10:18659683-chr2:151815199

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ARL4A--AC011287.1

1.0

0.0

ONLY_REF_SPLICE

ARL4A^ENSG00000122644.13

chr7:12687043:+

AC011287.1^ENSG00000229618.3

chr7:12758189:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1430:10392:5246

YES_LDAS

0.0034

1.8892

1.9656

"[""INTRACHROMOSOMAL[chr7:0.04Mb]"",""NEIGHBORS[35194]""]"

chr7:12687043-chr7:12758189

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ARID4A--CALM1

1.0

0.0

ONLY_REF_SPLICE

ARID4A^ENSG00000032219.19

chr14:58301690:+

CALM1^ENSG00000198668.13

chr14:90401259:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1214:11873:4139

YES_LDAS

0.0034

1.8256

1.9219

"[""INTRACHROMOSOMAL[chr14:32.02Mb]""]"

chr14:58301690-chr14:90401259

False

Read

count

too

low:

FAIL

ARHGAP6--SOX5

1.0

0.0

ONLY_REF_SPLICE

ARHGAP6^ENSG00000047648.23

chrX:11664241:-

SOX5^ENSG00000134532.19

chr12:24368639:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1131:21354:1897

YES_LDAS

0.0034

1.8892

1.8062

"[""INTERCHROMOSOMAL[chrX--chr12]""]"

chrX:11664241-chr12:24368639

False

Read

count

too

low:

FAIL

ARHGAP35--OVOL2

1.0

0.0

ONLY_REF_SPLICE

ARHGAP35^ENSG00000160007.19

chr19:46861209:+

OVOL2^ENSG00000125850.11

chr20:17957037:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1173:13863:24036

YES_LDAS

0.0034

1.6895

1.9219

"[""INTERCHROMOSOMAL[chr19--chr20]""]"

chr19:46861209-chr20:17957037

False

Read

count

too

low:

FAIL

ARHGAP26--AL357172.1

0.33

0.0

ONLY_REF_SPLICE

ARHGAP26^ENSG00000145819.18

chr5:142879445:+

AL357172.1^ENSG00000259044.1

chr14:85203232:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2277:47331:11411

NO_LDAS

0.0011

1.8892

1.2419

"[""INTERCHROMOSOMAL[chr5--chr14]""]"

chr5:142879445-chr14:85203232

False

Read

count

too

low:

FAIL

ARF5--LINC00106

1.0

0.0

INCL_NON_REF_SPLICE

ARF5^ENSG00000004059.11

chr7:127588518:+

LINC00106^ENSG00000236871.7

chrX:1397063:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2112:44710:5946

NO_LDAS

0.0034

1.6729

1.9899

"[""INTERCHROMOSOMAL[chr7--chrX]""]"

chr7:127588518-chrX:1397063

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ARF3--GNPDA1

1.0

0.0

INCL_NON_REF_SPLICE

ARF3^ENSG00000134287.10

chr12:48936984:-

GNPDA1^ENSG00000113552.16

chr5:142005116:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2412:16298:20435

NO_LDAS

0.0034

1.053

1.9086

"[""INTERCHROMOSOMAL[chr12--chr5]""]"

chr12:48936984-chr5:142005116

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AQP6--PICALM

1.0

0.0

INCL_NON_REF_SPLICE

AQP6^ENSG00000086159.13

chr12:49973032:+

PICALM^ENSG00000073921.18

chr11:86068780:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1441:2246:10220

NO_LDAS

0.0034

1.7232

1.9086

"[""INTERCHROMOSOMAL[chr12--chr11]""]"

chr12:49973032-chr11:86068780

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

APOBEC3F--RTL6

0.5

0.0

INCL_NON_REF_SPLICE

APOBEC3F^ENSG00000128394.17

chr22:39054961:+

RTL6^ENSG00000188636.4

chr22:44494470:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2219:12277:27623

NO_LDAS

0.0017

1.2419

1.7232

"[""INTRACHROMOSOMAL[chr22:5.44Mb]""]"

chr22:39054961-chr22:44494470

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

APBB2--ARAP2

1.0

0.0

ONLY_REF_SPLICE

APBB2^ENSG00000163697.17

chr4:41013583:-

ARAP2^ENSG00000047365.12

chr4:36148507:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1237:41903:18796

YES_LDAS

0.0034

1.8256

1.6895

"[""INTRACHROMOSOMAL[chr4:4.57Mb]""]"

chr4:41013583-chr4:36148507

False

Read

count

too

low:

FAIL

AP3S1--LVRN

1.0

0.0

ONLY_REF_SPLICE

AP3S1^ENSG00000177879.17

chr5:115842106:+

LVRN^ENSG00000172901.20

chr5:115983287:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2437:27843:27343

YES_LDAS

0.0034

1.7465

1.8256

"[""INTRACHROMOSOMAL[chr5:0.05Mb]"",""NEIGHBORS[48373]""]"

chr5:115842106-chr5:115983287

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AP003555.2--DNAJC15

1.0

0.0

ONLY_REF_SPLICE

AP003555.2^ENSG00000255191.1

chr11:69986166:+

DNAJC15^ENSG00000120675.6

chr13:43065686:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2382:52072:26909

YES_LDAS

0.0034

1.8892

1.5656

"[""INTERCHROMOSOMAL[chr11--chr13]""]"

chr11:69986166-chr13:43065686

False

Read

count

too

low:

FAIL

AP003555.2--AL159166.1

0.5

0.0

INCL_NON_REF_SPLICE

AP003555.2^ENSG00000255191.1

chr11:69986162:+

AL159166.1^ENSG00000231811.3

chr6:4345725:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1268:5021:5078

NO_LDAS

0.0017

1.8256

1.9656

"[""INTERCHROMOSOMAL[chr11--chr6]""]"

chr11:69986162-chr6:4345725

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AP002472.1--ALPK3

0.5

0.0

INCL_NON_REF_SPLICE

AP002472.1^ENSG00000266373.1

chr18:3580486:+

ALPK3^ENSG00000136383.7

chr15:84827484:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1123:5223:7782

YES_LDAS

0.0017

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr18--chr15]""]"

chr18:3580486-chr15:84827484

False

Read

count

too

low:

FAIL

AP000974.1--PICALM

1.0

0.0

INCL_NON_REF_SPLICE

AP000974.1^ENSG00000279742.1

chr11:85854696:-

PICALM^ENSG00000073921.18

chr11:86031611:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1327:37939:13135

YES_LDAS

0.0034

1.5058

1.9086

"[""INTRACHROMOSOMAL[chr11:0.10Mb]""]"

chr11:85854696-chr11:86031611

False

Read

count

too

low:

FAIL

AP000944.2--FGD4

1.0

0.0

INCL_NON_REF_SPLICE

AP000944.2^ENSG00000277599.1

chr11:65423961:+

FGD4^ENSG00000139132.15

chr12:32600338:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2430:42688:17941

NO_LDAS

0.0034

1.6729

1.7819

"[""INTERCHROMOSOMAL[chr11--chr12]""]"

chr11:65423961-chr12:32600338

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AP000347.1--MSR1

1.0

0.0

INCL_NON_REF_SPLICE

AP000347.1^ENSG00000272578.5

chr22:23659865:-

MSR1^ENSG00000038945.15

chr8:16143611:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1388:19300:20589

YES_LDAS

0.0034

1.9329

1.9219

"[""INTERCHROMOSOMAL[chr22--chr8]""]"

chr22:23659865-chr8:16143611

False

Read

count

too

low:

FAIL

AP000253.1--TIAM1

1.0

0.0

INCL_NON_REF_SPLICE

AP000253.1^ENSG00000234509.1

chr21:31655274:-

TIAM1^ENSG00000156299.13

chr21:31464035:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1341:46086:26208

YES_LDAS

0.0034

1.6895

1.8323

"[""INTRACHROMOSOMAL[chr21:0.09Mb]"",""NEIGHBORS[93616]""]"

chr21:31655274-chr21:31464035

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ANO2--LINC00989

1.0

0.0

INCL_NON_REF_SPLICE

ANO2^ENSG00000047617.15

chr12:5732520:-

LINC00989^ENSG00000250334.6

chr4:79576261:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2251:1979:16988

NO_LDAS

0.0034

1.6729

1.7819

"[""INTERCHROMOSOMAL[chr12--chr4]""]"

chr12:5732520-chr4:79576261

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ANKRD44--CLEC18A

0.33

0.0

ONLY_REF_SPLICE

ANKRD44^ENSG00000065413.20

chr2:197310578:-

CLEC18A^ENSG00000157322.17

chr16:69951261:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2405:13709:17184

YES_LDAS

0.0011

1.7056

1.7232

"[""INTERCHROMOSOMAL[chr2--chr16]""]"

chr2:197310578-chr16:69951261

False

Read

count

too

low:

FAIL

ANKRD36C--AC063976.2

1.0

0.0

INCL_NON_REF_SPLICE

ANKRD36C^ENSG00000174501.14

chr2:95910373:-

AC063976.2^ENSG00000224431.1

chr5:132199546:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2368:41490:3144

NO_LDAS

0.0034

1.7232

1.8892

"[""INTERCHROMOSOMAL[chr2--chr5]""]"

chr2:95910373-chr5:132199546

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ANKRD26P2--ANKRD36

0.5

0.0

INCL_NON_REF_SPLICE

ANKRD26P2^ENSG00000235550.1

chr13:38931609:-

ANKRD36^ENSG00000135976.20

chr2:97247480:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1416:13556:7978

YES_LDAS

0.0017

1.5546

1.9899

"[""INTERCHROMOSOMAL[chr13--chr2]""]"

chr13:38931609-chr2:97247480

False

Read

count

too

low:

FAIL

ANKRD17--GMDS

1.0

0.0

ONLY_REF_SPLICE

ANKRD17^ENSG00000132466.19

chr4:73258276:-

GMDS^ENSG00000112699.11

chr6:1960966:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1397:47283:14410

YES_LDAS

0.0034

1.7465

1.6895

"[""INTERCHROMOSOMAL[chr4--chr6]""]"

chr4:73258276-chr6:1960966

False

Read

count

too

low:

FAIL

ANKRD13A--ZNF652

1.0

0.0

ONLY_REF_SPLICE

ANKRD13A^ENSG00000076513.17

chr12:109999784:+

ZNF652^ENSG00000198740.9

chr17:49298924:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2258:37721:21808

YES_LDAS

0.0034

1.7465

1.9219

"[""INTERCHROMOSOMAL[chr12--chr17]""]"

chr12:109999784-chr17:49298924

False

Read

count

too

low:

FAIL

ANKRD13A--SKP1

0.5

0.0

INCL_NON_REF_SPLICE

ANKRD13A^ENSG00000076513.17

chr12:110022266:+

SKP1^ENSG00000113558.19

chr5:134167243:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1138:45738:4727

YES_LDAS

0.0017

1.9656

1.5656

"[""INTERCHROMOSOMAL[chr12--chr5]""]"

chr12:110022266-chr5:134167243

False

Read

count

too

low:

FAIL

ANKRD12--NDUFV2

1.0

0.0

ONLY_REF_SPLICE

ANKRD12^ENSG00000101745.17

chr18:9211784:+

NDUFV2^ENSG00000178127.13

chr18:9134186:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1211:16031:17535

YES_LDAS

0.0034

1.8256

1.9329

"[""INTRACHROMOSOMAL[chr18:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1883]""]"

chr18:9211784-chr18:9134186

False

Read

count

too

low:

FAIL

ANKLE2--ADD3

1.0

0.0

ONLY_REF_SPLICE

ANKLE2^ENSG00000176915.15

chr12:132761618:-

ADD3^ENSG00000148700.15

chr10:110119211:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1437:49783:9463

YES_LDAS

0.0034

1.3753

1.9329

"[""INTERCHROMOSOMAL[chr12--chr10]""]"

chr12:132761618-chr10:110119211

False

Read

count

too

low:

FAIL

ANKDD1A--TLX1

1.0

0.0

INCL_NON_REF_SPLICE

ANKDD1A^ENSG00000166839.17

chr15:64934234:+

TLX1^ENSG00000107807.13

chr10:101137016:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1252:33789:13793

NO_LDAS

0.0034

1.9329

1.8062

"[""INTERCHROMOSOMAL[chr15--chr10]""]"

chr15:64934234-chr10:101137016

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AMFR--SIAH1

1.0

0.0

ONLY_REF_SPLICE

AMFR^ENSG00000159461.15

chr16:56401733:-

SIAH1^ENSG00000196470.12

chr16:48362430:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2353:48003:15741

YES_LDAS

0.0034

1.585

1.8892

"[""INTRACHROMOSOMAL[chr16:7.91Mb]""]"

chr16:56401733-chr16:48362430

False

Read

count

too

low:

FAIL

ALG11--CNTN1

1.0

0.0

INCL_NON_REF_SPLICE

ALG11^ENSG00000253710.5

chr13:52028910:+

CNTN1^ENSG00000018236.15

chr12:41029179:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1301:23167:28744

NO_LDAS

0.0034

1.5628

1.4566

"[""INTERCHROMOSOMAL[chr13--chr12]""]"

chr13:52028910-chr12:41029179

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ALCAM--ZMYND11

1.0

0.0

ONLY_REF_SPLICE

ALCAM^ENSG00000170017.12

chr3:105367481:+

ZMYND11^ENSG00000015171.20

chr10:179994:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1319:3103:23924

YES_LDAS

0.0034

1.8892

1.6049

"[""INTERCHROMOSOMAL[chr3--chr10]""]"

chr3:105367481-chr10:179994

False

Read

count

too

low:

FAIL

AL645608.2--LARGE1

1.0

0.0

INCL_NON_REF_SPLICE

AL645608.2^ENSG00000230699.2

chr1:914147:+

LARGE1^ENSG00000133424.22

chr22:33761459:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1345:10846:4237

NO_LDAS

0.0034

1.3996

1.6895

"[""INTERCHROMOSOMAL[chr1--chr22]""]"

chr1:914147-chr22:33761459

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL606534.4--PRR13

0.1

0.0

INCL_NON_REF_SPLICE

AL606534.4^ENSG00000253326.2

chr1:243056212:-

PRR13^ENSG00000205352.11

chr12:53443529:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1369:31338:22299

YES_LDAS

0.0003

1.8323

1.7465

"[""INTERCHROMOSOMAL[chr1--chr12]""]"

chr1:243056212-chr12:53443529

False

Read

count

too

low:

FAIL

AL512604.2--TRDN-AS1

0.5

0.0

INCL_NON_REF_SPLICE

AL512604.2^ENSG00000233242.3

chr9:37113148:-

TRDN-AS1^ENSG00000235535.8

chr6:123360690:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2295:24162:28562

NO_LDAS

0.0017

1.2867

1.231

"[""INTERCHROMOSOMAL[chr9--chr6]""]"

chr9:37113148-chr6:123360690

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL445305.1--AP3S2

0.5

0.0

INCL_NON_REF_SPLICE

AL445305.1^ENSG00000213036.3

chr1:214483043:-

AP3S2^ENSG00000157823.17

chr15:89837722:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1345:40730:1294

YES_LDAS

0.0017

1.9656

1.8892

"[""INTERCHROMOSOMAL[chr1--chr15]""]"

chr1:214483043-chr15:89837722

False

Read

count

too

low:

FAIL

AL445250.1--MIGA2

0.33

0.0

ONLY_REF_SPLICE

AL445250.1^ENSG00000225096.3

chr6:57961742:+

MIGA2^ENSG00000148343.18

chr9:129048427:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1232:22778:29221

NO_LDAS

0.0011

1.9329

"[""INTERCHROMOSOMAL[chr6--chr9]""]"

chr6:57961742-chr9:129048427

False

Read

count

too

low:

FAIL

AL445250.1--AC110079.1

1.0

0.0

ONLY_REF_SPLICE

AL445250.1^ENSG00000225096.3

chr6:57961742:+

AC110079.1^ENSG00000260404.3

chr4:118595912:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2382:3298:19188

NO_LDAS

0.0034

1.9329

1.8892

"[""INTERCHROMOSOMAL[chr6--chr4]""]"

chr6:57961742-chr4:118595912

False

Read

count

too

low:

FAIL

AL391422.4--AC011370.1

0.17

0.0

INCL_NON_REF_SPLICE

AL391422.4^ENSG00000270504.1

chr6:3751768:+

AC011370.1^ENSG00000287630.1

chr5:147726410:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2240:6121:25704

NO_LDAS

0.0006

1.5329

1.7819

"[""INTERCHROMOSOMAL[chr6--chr5]""]"

chr6:3751768-chr5:147726410

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL390860.1--TRIM58

1.0

0.0

ONLY_REF_SPLICE

AL390860.1^ENSG00000235749.3

chr1:247640429:+

TRIM58^ENSG00000162722.9

chr1:247860617:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2266:26192:19272

YES_LDAS

0.0034

1.9219

1.9656

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.10Mb]"",""NEIGHBORS[95932]""]"

chr1:247640429-chr1:247860617

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AL390719.1--GPN2

1.0

0.0

ONLY_REF_SPLICE

AL390719.1^ENSG00000217801.10

chr1:1061117:+

GPN2^ENSG00000142751.15

chr1:26886133:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2374:4786:18852

YES_LDAS

0.0034

1.9329

1.8892

"[""INTRACHROMOSOMAL[chr1:25.81Mb]""]"

chr1:1061117-chr1:26886133

False

Read

count

too

low:

FAIL

AL365223.1--AC010768.3

0.14

0.0

INCL_NON_REF_SPLICE

AL365223.1^ENSG00000213109.4

chr6:136900768:-

AC010768.3^ENSG00000255106.1

chr11:44540386:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2190:39144:20855

NO_LDAS

0.0005

1.8323

1.6402

"[""INTERCHROMOSOMAL[chr6--chr11]""]"

chr6:136900768-chr11:44540386

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL365223.1--AC007998.1

0.14

0.0

INCL_NON_REF_SPLICE

AL365223.1^ENSG00000213109.4

chr6:136900768:-

AC007998.1^ENSG00000239683.1

chr18:35383709:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2190:39144:20855

NO_LDAS

0.0005

1.8323

1.3383

"[""INTERCHROMOSOMAL[chr6--chr18]""]"

chr6:136900768-chr18:35383709

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL358790.1--PLS3

0.5

0.0

ONLY_REF_SPLICE

AL358790.1^ENSG00000282772.1

chr10:102851508:-

PLS3^ENSG00000102024.18

chrX:115610243:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2270:12391:11453

NO_LDAS

0.0017

1.9656

1.7819

"[""INTERCHROMOSOMAL[chr10--chrX]""]"

chr10:102851508-chrX:115610243

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AL358781.1--ZFYVE19

1.0

0.0

INCL_NON_REF_SPLICE

AL358781.1^ENSG00000176868.2

chr9:131497995:-

ZFYVE19^ENSG00000166140.17

chr15:40807672:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1348:40681:25928

YES_LDAS

0.0034

1.9086

1.6402

"[""INTERCHROMOSOMAL[chr9--chr15]""]"

chr9:131497995-chr15:40807672

False

Read

count

too

low:

FAIL

AL356218.2--PDLIM1

1.0

0.0

INCL_NON_REF_SPLICE

AL356218.2^ENSG00000286322.1

chr9:33401719:+

PDLIM1^ENSG00000107438.9

chr10:95238026:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1392:15829:27189

NO_LDAS

0.0034

1.3996

1.7465

"[""INTERCHROMOSOMAL[chr9--chr10]""]"

chr9:33401719-chr10:95238026

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL353807.3--AC084198.1

1.0

0.0

INCL_NON_REF_SPLICE

AL353807.3^ENSG00000246203.2

chr1:155648406:-

AC084198.1^ENSG00000286699.1

chr3:101692893:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2128:16565:15040

YES_LDAS

0.0034

1.7819

1.9219

"[""INTERCHROMOSOMAL[chr1--chr3]""]"

chr1:155648406-chr3:101692893

False

Read

count

too

low:

FAIL

AL162426.1--CREB3

1.0

0.0

INCL_NON_REF_SPLICE

AL162426.1^ENSG00000279571.3

chr9:127690786:-

CREB3^ENSG00000107175.12

chr9:35733429:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1368:46482:25241

YES_LDAS

0.0034

1.6402

1.8256

"[""INTRACHROMOSOMAL[chr9:91.95Mb]""]"

chr9:127690786-chr9:35733429

False

Read

count

too

low:

FAIL

AL161910.1--MYO1E

0.5

0.0

ONLY_REF_SPLICE

AL161910.1^ENSG00000285907.1

chr9:89602740:-

MYO1E^ENSG00000157483.9

chr15:59188216:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1311:46369:22243

NO_LDAS

0.0017

1.9656

1.8892

"[""INTERCHROMOSOMAL[chr9--chr15]""]"

chr9:89602740-chr15:59188216

False

Read

count

too

low:

FAIL

AL158211.5--SALL4P7

1.0

0.0

INCL_NON_REF_SPLICE

AL158211.5^ENSG00000279631.1

chr10:22252359:+

SALL4P7^ENSG00000258692.2

chr14:60494065:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2482:24607:12938

NO_LDAS

0.0034

1.5656

1.7465

"[""INTERCHROMOSOMAL[chr10--chr14]""]"

chr10:22252359-chr14:60494065

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL157944.1--ILK

1.0

0.0

INCL_NON_REF_SPLICE

AL157944.1^ENSG00000233290.3

chr1:82212650:-

ILK^ENSG00000166333.14

chr11:6609908:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1139:4155:24457

NO_LDAS

0.0034

1.9656

1.5329

"[""INTERCHROMOSOMAL[chr1--chr11]""]"

chr1:82212650-chr11:6609908

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL157838.1--ZNF714

1.0

0.0

ONLY_REF_SPLICE

AL157838.1^ENSG00000197670.6

chr20:53562867:+

ZNF714^ENSG00000160352.16

chr19:21098185:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2246:28053:28212

YES_LDAS

0.0034

1.9329

"[""INTERCHROMOSOMAL[chr20--chr19]""]"

chr20:53562867-chr19:21098185

False

Read

count

too

low:

FAIL

AL139220.2--KLF17

1.0

0.0

ONLY_REF_SPLICE

AL139220.2^ENSG00000230615.7

chr1:44061227:+

KLF17^ENSG00000171872.5

chr1:44129353:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1375:39047:18922

YES_LDAS

0.0034

1.8892

1.8295

"[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""NEIGHBORS[2908]""]"

chr1:44061227-chr1:44129353

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AL135910.1--AL009176.1

1.0

0.0

ONLY_REF_SPLICE

AL135910.1^ENSG00000272848.2

chr6:169430641:-

AL009176.1^ENSG00000285887.1

chr6:169421174:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2141:36167:24358

YES_LDAS

0.0034

1.9086

1.7819

"[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[1264]""]"

chr6:169430641-chr6:169421174

False

Read

count

too

low:

FAIL

AL133346.1--LINC00511

1.0

0.0

INCL_NON_REF_SPLICE

AL133346.1^ENSG00000227220.1

chr6:131951244:+

LINC00511^ENSG00000227036.8

chr17:72574534:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2392:38942:24401

YES_LDAS

0.0034

1.6895

1.9329

"[""INTERCHROMOSOMAL[chr6--chr17]""]"

chr6:131951244-chr17:72574534

False

Read

count

too

low:

FAIL

AL121972.1--TNIP3

1.0

0.0

INCL_NON_REF_SPLICE

AL121972.1^ENSG00000229862.5

chr6:73524546:+

TNIP3^ENSG00000050730.16

chr4:121131864:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1282:45770:6997

YES_LDAS

0.0034

1.8892

1.9656

"[""INTERCHROMOSOMAL[chr6--chr4]""]"

chr6:73524546-chr4:121131864

False

Read

count

too

low:

FAIL

AL109809.1--FLT1

1.0

0.0

INCL_NON_REF_SPLICE

AL109809.1^ENSG00000232528.3

chr20:1768008:-

FLT1^ENSG00000102755.12

chr13:28495000:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1449:19736:18235

NO_LDAS

0.0034

1.8062

1.8892

"[""INTERCHROMOSOMAL[chr20--chr13]""]"

chr20:1768008-chr13:28495000

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL050403.2--PLCB1

1.0

0.0

ONLY_REF_SPLICE

AL050403.2^ENSG00000270792.6

chr20:10673025:+

PLCB1^ENSG00000182621.18

chr20:8628294:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1167:27341:2177

YES_LDAS

0.0034

1.3383

1.9086

"[""INTRACHROMOSOMAL[chr20:1.70Mb]""]"

chr20:10673025-chr20:8628294

False

Read

count

too

low:

FAIL

AL035409.2--ST6GALNAC5

1.0

0.0

ONLY_REF_SPLICE

AL035409.2^ENSG00000288543.1

chr1:77068843:+

ST6GALNAC5^ENSG00000117069.15

chr1:77044204:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1194:2974:5792

YES_LDAS

0.0034

1.8295

1.8323

"[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[374]""]"

chr1:77068843-chr1:77044204

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AL031777.1--UQCRC2

1.0

0.0

INCL_NON_REF_SPLICE

AL031777.1^ENSG00000217275.2

chr6:26202157:+

UQCRC2^ENSG00000140740.11

chr16:21976167:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1351:29161:19482

NO_LDAS

0.0034

1.9899

"[""INTERCHROMOSOMAL[chr6--chr16]""]"

chr6:26202157-chr16:21976167

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL031709.1--BTN2A1

1.0

0.0

INCL_NON_REF_SPLICE

AL031709.1^ENSG00000260425.1

chr16:1361385:-

BTN2A1^ENSG00000112763.17

chr6:26458032:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1322:47744:10865

YES_LDAS

0.0034

1.8892

1.6895

"[""INTERCHROMOSOMAL[chr16--chr6]""]"

chr16:1361385-chr6:26458032

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AL031595.3--ARCN1

1.0

0.0

INCL_NON_REF_SPLICE

AL031595.3^ENSG00000280434.1

chr22:44150705:+

ARCN1^ENSG00000095139.14

chr11:118572422:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1332:25755:21934

NO_LDAS

0.0034

1.9329

1.4566

"[""INTERCHROMOSOMAL[chr22--chr11]""]"

chr22:44150705-chr11:118572422

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL021155.4--DSP

1.0

0.0

INCL_NON_REF_SPLICE

AL021155.4^ENSG00000285646.2

chr1:11908227:+

DSP^ENSG00000096696.14

chr6:7579955:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2236:27511:18529

NO_LDAS

0.0034

1.7056

1.9656

"[""INTERCHROMOSOMAL[chr1--chr6]""]"

chr1:11908227-chr6:7579955

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AL008729.1--TYW1

0.5

0.0

ONLY_REF_SPLICE

AL008729.1^ENSG00000215022.7

chr6:13281429:-

TYW1^ENSG00000198874.13

chr7:67183126:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1220:49386:21388

NO_LDAS

0.0017

1.9329

1.8323

"[""INTERCHROMOSOMAL[chr6--chr7]""]"

chr6:13281429-chr7:67183126

False

Read

count

too

low:

FAIL

AL008707.1--TENM1

1.0

0.0

INCL_NON_REF_SPLICE

AL008707.1^ENSG00000232599.1

chrX:125185643:-

TENM1^ENSG00000009694.13

chrX:124963817:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2228:50220:23672

YES_LDAS

0.0034

1.9899

1.9656

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chrX:0.24Mb]""]"

chrX:125185643-chrX:124963817

False

Excluded

annotation

pattern:

GTEx_recurrent_StarF2019

FAIL

AKT3--RABGAP1L

1.0

0.0

ONLY_REF_SPLICE

AKT3^ENSG00000117020.19

chr1:243843125:-

RABGAP1L^ENSG00000152061.23

chr1:174637375:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2158:13362:2569

YES_LDAS

0.0034

1.6402

1.8256

"[""INTRACHROMOSOMAL[chr1:68.49Mb]""]"

chr1:243843125-chr1:174637375

False

Read

count

too

low:

FAIL

AKAP10--GPRIN3

1.0

0.0

INCL_NON_REF_SPLICE

AKAP10^ENSG00000108599.15

chr17:19977592:-

GPRIN3^ENSG00000185477.5

chr4:89241619:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2344:10093:18936

NO_LDAS

0.0034

1.9656

1.8295

"[""INTERCHROMOSOMAL[chr17--chr4]""]"

chr17:19977592-chr4:89241619

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AHRR--PDCD6

1.0

0.0

ONLY_REF_SPLICE

AHRR^ENSG00000063438.19

chr5:353911:+

PDCD6^ENSG00000249915.8

chr5:306602:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1285:19696:27890

YES_LDAS

0.0034

1.9899

1.9329

"[""INTRACHROMOSOMAL[chr5:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[6785]""]"

chr5:353911-chr5:306602

False

Read

count

too

low:

FAIL

AGTRAP--NARS2

1.0

0.0

ONLY_REF_SPLICE

AGTRAP^ENSG00000177674.16

chr1:11745837:+

NARS2^ENSG00000137513.10

chr11:78443758:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1129:34622:27707

YES_LDAS

0.0034

1.9656

1.6895

"[""INTERCHROMOSOMAL[chr1--chr11]""]"

chr1:11745837-chr11:78443758

False

Read

count

too

low:

FAIL

AGPAT2--WARS2

0.33

0.0

INCL_NON_REF_SPLICE

AGPAT2^ENSG00000169692.13

chr9:136677265:-

WARS2^ENSG00000116874.12

chr1:119076427:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1465:6768:22060

NO_LDAS

0.0011

1.8062

1.9899

"[""INTERCHROMOSOMAL[chr9--chr1]""]"

chr9:136677265-chr1:119076427

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AGK--RYR2

1.0

0.0

ONLY_REF_SPLICE

AGK^ENSG00000006530.18

chr7:141555567:+

RYR2^ENSG00000198626.17

chr1:237643327:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1170:27341:19076

NO_LDAS

0.0034

1.9219

1.9086

"[""INTERCHROMOSOMAL[chr7--chr1]""]"

chr7:141555567-chr1:237643327

False

Read

count

too

low:

FAIL

AGAP10P--AC022400.4

0.5

0.0

INCL_NON_REF_SPLICE

AGAP10P^ENSG00000230869.1

chr10:45684520:+

AC022400.4^ENSG00000272140.2

chr10:73713332:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1328:48545:15279

YES_LDAS

0.0017

1.7465

1.9086

"[""INTRACHROMOSOMAL[chr10:28.00Mb]""]"

chr10:45684520-chr10:73713332

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AFMID--LINC02507

1.0

0.0

INCL_NON_REF_SPLICE

AFMID^ENSG00000183077.15

chr17:78191060:+

LINC02507^ENSG00000251688.2

chr4:147575468:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1342:42777:15993

YES_LDAS

0.0034

1.5058

1.8295

"[""INTERCHROMOSOMAL[chr17--chr4]""]"

chr17:78191060-chr4:147575468

False

Read

count

too

low:

FAIL

AFMID--EXT1

1.0

0.0

INCL_NON_REF_SPLICE

AFMID^ENSG00000183077.15

chr17:78202569:+

EXT1^ENSG00000182197.12

chr8:118111232:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2432:13240:17380

NO_LDAS

0.0034

1.2729

1.8892

"[""INTERCHROMOSOMAL[chr17--chr8]""]"

chr17:78202569-chr8:118111232

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AFG1L--H6PD

1.0

0.0

INCL_NON_REF_SPLICE

AFG1L^ENSG00000135537.17

chr6:108295218:+

H6PD^ENSG00000049239.13

chr1:9265679:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2344:46822:25129

NO_LDAS

0.0034

1.9899

1.9656

"[""INTERCHROMOSOMAL[chr6--chr1]""]"

chr6:108295218-chr1:9265679

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AF201337.1--TSPEAR

0.25

0.0

INCL_NON_REF_SPLICE

AF201337.1^ENSG00000254332.1

chr8:69129833:+

TSPEAR^ENSG00000175894.18

chr21:44498185:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2327:28150:21290

NO_LDAS

0.0009

1.2729

1.7968

"[""INTERCHROMOSOMAL[chr8--chr21]""]"

chr8:69129833-chr21:44498185

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ADRA2C--OAS3

1.0

0.0

INCL_NON_REF_SPLICE

ADRA2C^ENSG00000184160.8

chr4:3767676:+

OAS3^ENSG00000111331.14

chr12:112969685:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1181:37753:4489

YES_LDAS

0.0034

1.7819

1.9219

"[""INTERCHROMOSOMAL[chr4--chr12]""]"

chr4:3767676-chr12:112969685

False

Read

count

too

low:

FAIL

ADPGK--C12orf73

1.0

0.0

ONLY_REF_SPLICE

ADPGK^ENSG00000159322.17

chr15:72783459:-

C12orf73^ENSG00000204954.10

chr12:103956748:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1325:3920:28450

YES_LDAS

0.0034

1.6402

1.7232

"[""INTERCHROMOSOMAL[chr15--chr12]""]"

chr15:72783459-chr12:103956748

False

Read

count

too

low:

FAIL

ADGRA3--PSMA4

1.0

0.0

ONLY_REF_SPLICE

ADGRA3^ENSG00000152990.14

chr4:22424191:-

PSMA4^ENSG00000041357.16

chr15:78546575:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1352:9640:14508

YES_LDAS

0.0034

1.8256

1.9656

"[""INTERCHROMOSOMAL[chr4--chr15]""]"

chr4:22424191-chr15:78546575

False

Read

count

too

low:

FAIL

ADCK1--PSPC1

1.0

0.0

ONLY_REF_SPLICE

ADCK1^ENSG00000063761.16

chr14:77800170:+

PSPC1^ENSG00000121390.19

chr13:19772543:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2189:9236:28772

YES_LDAS

0.0034

1.5656

1.9086

"[""INTERCHROMOSOMAL[chr14--chr13]""]"

chr14:77800170-chr13:19772543

False

Read

count

too

low:

FAIL

ADCK1--KDM3A

1.0

0.0

ONLY_REF_SPLICE

ADCK1^ENSG00000063761.16

chr14:77859279:+

KDM3A^ENSG00000115548.17

chr2:86449807:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1325:48189:28338

YES_LDAS

0.0034

1.7968

1.4295

"[""INTERCHROMOSOMAL[chr14--chr2]""]"

chr14:77859279-chr2:86449807

False

Read

count

too

low:

FAIL

ADAT3--BLCAP

1.0

0.0

INCL_NON_REF_SPLICE

ADAT3^ENSG00000213638.6

chr19:1912185:+

BLCAP^ENSG00000166619.15

chr20:37521451:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1347:42332:10654

NO_LDAS

0.0034

1.7465

1.6049

"[""INTERCHROMOSOMAL[chr19--chr20]""]"

chr19:1912185-chr20:37521451

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ADAMTS9--AC008694.1

0.5

0.0

INCL_NON_REF_SPLICE

ADAMTS9^ENSG00000163638.13

chr3:64633468:-

AC008694.1^ENSG00000253798.2

chr5:157690345:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2143:45204:22635

NO_LDAS

0.0017

1.9329

1.6402

"[""INTERCHROMOSOMAL[chr3--chr5]""]"

chr3:64633468-chr5:157690345

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ADAMTS1--ITPK1-AS1

1.0

0.0

INCL_NON_REF_SPLICE

ADAMTS1^ENSG00000154734.16

chr21:26837680:-

ITPK1-AS1^ENSG00000258730.1

chr14:93069856:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2259:49443:29165

NO_LDAS

0.0034

1.7465

1.5058

"[""INTERCHROMOSOMAL[chr21--chr14]""]"

chr21:26837680-chr14:93069856

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

ADAM19--GALNT10

1.0

0.0

ONLY_REF_SPLICE

ADAM19^ENSG00000135074.16

chr5:157488265:-

GALNT10^ENSG00000164574.16

chr5:154218029:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1152:23458:27231

NO_LDAS

0.0034

1.9086

1.3753

"[""INTRACHROMOSOMAL[chr5:2.97Mb]""]"

chr5:157488265-chr5:154218029

False

Read

count

too

low:

FAIL

ADAM12--RIN2

1.0

0.0

ONLY_REF_SPLICE

ADAM12^ENSG00000148848.14

chr10:126330412:-

RIN2^ENSG00000132669.14

chr20:19935099:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1457:47898:15727

NO_LDAS

0.0034

1.9656

1.8256

"[""INTERCHROMOSOMAL[chr10--chr20]""]"

chr10:126330412-chr20:19935099

False

Read

count

too

low:

FAIL

ACYP2--LINC00333

1.0

0.0

ONLY_REF_SPLICE

ACYP2^ENSG00000170634.13

chr2:54051050:+

LINC00333^ENSG00000233349.1

chr13:84562364:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2312:46822:24849

YES_LDAS

0.0034

1.9086

1.7232

"[""INTERCHROMOSOMAL[chr2--chr13]""]"

chr2:54051050-chr13:84562364

False

Read

count

too

low:

FAIL

ACY1--SIPA1

1.0

0.0

INCL_NON_REF_SPLICE

ACY1^ENSG00000243989.9

chr3:51988603:+

SIPA1^ENSG00000213445.10

chr11:65649681:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2132:6558:7964

NO_LDAS

0.0034

1.9329

"[""INTERCHROMOSOMAL[chr3--chr11]""]"

chr3:51988603-chr11:65649681

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ACTR3C--AC092681.1

0.5

0.0

INCL_NON_REF_SPLICE

ACTR3C^ENSG00000106526.10

chr7:150248948:-

AC092681.1^ENSG00000224016.2

chr7:149909705:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1137:27673:18417

YES_LDAS

0.0017

1.8295

1.9899

"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.33Mb]""]"

chr7:150248948-chr7:149909705

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ACTR3C--AC092681.1

1.0

0.0

ONLY_REF_SPLICE

ACTR3C^ENSG00000106526.10

chr7:150284753:-

AC092681.1^ENSG00000224016.2

chr7:149891301:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1108:46773:8623

NO_LDAS

0.0034

1.9899

"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.33Mb]""]"

chr7:150284753-chr7:149891301

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

ACSL1--PDPK1

0.5

0.0

INCL_NON_REF_SPLICE

ACSL1^ENSG00000151726.15

chr4:184765891:-

PDPK1^ENSG00000140992.19

chr16:2583445:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2184:38716:1673

NO_LDAS

0.0017

1.7819

1.6895

"[""INTERCHROMOSOMAL[chr4--chr16]""]"

chr4:184765891-chr16:2583445

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ACP1--CMTR1

1.0

0.0

INCL_NON_REF_SPLICE

ACP1^ENSG00000143727.16

chr2:277372:+

CMTR1^ENSG00000137200.13

chr6:37459566:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2119:22981:9421

YES_LDAS

0.0034

1.8892

1.3383

"[""INTERCHROMOSOMAL[chr2--chr6]""]"

chr2:277372-chr6:37459566

False

Read

count

too

low:

FAIL

ACKR2--MPHOSPH8

1.0

0.0

ONLY_REF_SPLICE

ACKR2^ENSG00000144648.16

chr3:42834720:+

MPHOSPH8^ENSG00000196199.14

chr13:19663040:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2492:11282:1266

YES_LDAS

0.0034

1.9656

1.5058

"[""INTERCHROMOSOMAL[chr3--chr13]""]"

chr3:42834720-chr13:19663040

True

pair|recurrent

breakpoints

Blacklisted

FAIL

ACER3--TTC27

1.0

0.0

ONLY_REF_SPLICE

ACER3^ENSG00000078124.13

chr11:76861079:+

TTC27^ENSG00000018699.13

chr2:32811024:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1425:32858:1589

YES_LDAS

0.0034

1.9656

1.7819

"[""INTERCHROMOSOMAL[chr11--chr2]""]"

chr11:76861079-chr2:32811024

False

Read

count

too

low:

FAIL

ACER2--ZDHHC21

1.0

0.0

ONLY_REF_SPLICE

ACER2^ENSG00000177076.6

chr9:19409192:+

ZDHHC21^ENSG00000175893.12

chr9:14683729:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2180:14187:21682

YES_LDAS

0.0034

1.9656

1.9086

"[""INTRACHROMOSOMAL[chr9:4.72Mb]""]"

chr9:19409192-chr9:14683729

False

Read

count

too

low:

FAIL

ACBD6--COP1

1.0

0.0

ONLY_REF_SPLICE

ACBD6^ENSG00000230124.8

chr1:180492269:-

COP1^ENSG00000143207.21

chr1:176184692:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1166:47348:3564

YES_LDAS

0.0034

1.9656

1.8323

"[""INTRACHROMOSOMAL[chr1:4.06Mb]""]"

chr1:180492269-chr1:176184692

False

Read

count

too

low:

FAIL

AC245297.3--SRGAP2

0.17

0.0

ONLY_REF_SPLICE

AC245297.3^ENSG00000274265.5

chr1:149177212:+

SRGAP2^ENSG00000266028.7

chr1:206303281:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1356:9721:29669

YES_LDAS

0.0006

1.7819

1.9656

"[""INTRACHROMOSOMAL[chr1:56.94Mb]""]"

chr1:149177212-chr1:206303281

False

Read

count

too

low:

FAIL

AC233699.1--TBC1D3

0.04

0.0

ONLY_REF_SPLICE

AC233699.1^ENSG00000261499.2

chr17:36320547:+

TBC1D3^ENSG00000274611.3

chr17:38191030:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1440:45624:1392

YES_LDAS

0.0001

1.9329

1.7465

"[""INTRACHROMOSOMAL[chr17:1.86Mb]""]"

chr17:36320547-chr17:38191030

False

Read

count

too

low:

FAIL

AC233290.1--RGMA

1.0

0.0

INCL_NON_REF_SPLICE

AC233290.1^ENSG00000257872.1

chr12:76137565:+

RGMA^ENSG00000182175.14

chr15:93044933:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1138:30213:19622

YES_LDAS

0.0034

1.7819

1.7056

"[""INTERCHROMOSOMAL[chr12--chr15]""]"

chr12:76137565-chr15:93044933

False

Read

count

too

low:

FAIL

AC215522.2--TRMT2B

1.0

0.0

ONLY_REF_SPLICE

AC215522.2^ENSG00000282572.2

chr7:26289:-

TRMT2B^ENSG00000188917.15

chrX:101010707:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1415:44937:28786

YES_LDAS

0.0034

1.9329

1.5656

"[""INTERCHROMOSOMAL[chr7--chrX]""]"

chr7:26289-chrX:101010707

False

Read

count

too

low:

FAIL

AC211486.3--AC105052.5

0.07

0.0

INCL_NON_REF_SPLICE

AC211486.3^ENSG00000273598.1

chr7:75323869:-

AC105052.5^ENSG00000286830.1

chr7:102703481:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2483:43230:24373

YES_LDAS

0.0002

1.4566

1.7465

"[""INTRACHROMOSOMAL[chr7:27.37Mb]""]"

chr7:75323869-chr7:102703481

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AC211476.4--ZNF786

0.09

0.0

ONLY_REF_SPLICE

AC211476.4^ENSG00000277125.1

chr7:73069531:+

ZNF786^ENSG00000197362.15

chr7:149074538:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2201:3346:18039

YES_LDAS

0.0003

1.4566

1.9656

"[""INTRACHROMOSOMAL[chr7:75.99Mb]""]"

chr7:73069531-chr7:149074538

False

Read

count

too

low:

FAIL

AC211476.4--CCDC146

0.25

0.0

ONLY_REF_SPLICE

AC211476.4^ENSG00000277125.1

chr7:73072670:+

CCDC146^ENSG00000135205.15

chr7:77236947:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1366:35868:5652

YES_LDAS

0.0009

1.8323

1.9329

"[""INTRACHROMOSOMAL[chr7:4.05Mb]""]"

chr7:73072670-chr7:77236947

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

AC139795.1--ZFP62

0.5

0.0

ONLY_REF_SPLICE

AC139795.1^ENSG00000246596.7

chr5:177672021:-

ZFP62^ENSG00000196670.14

chr5:180851493:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1430:15384:7838

YES_LDAS

0.0017

1.5329

1.9086

"[""INTRACHROMOSOMAL[chr5:3.18Mb]""]"

chr5:177672021-chr5:180851493

False

Read

count

too

low:

FAIL

AC139795.1--ACAA1

0.25

0.0

INCL_NON_REF_SPLICE

AC139795.1^ENSG00000246596.7

chr5:177632368:-

ACAA1^ENSG00000060971.19

chr3:38129310:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2171:4228:20379

NO_LDAS

0.0009

1.8323

1.9656

"[""INTERCHROMOSOMAL[chr5--chr3]""]"

chr5:177632368-chr3:38129310

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC138866.1--ZNF623

0.17

0.0

ONLY_REF_SPLICE

AC138866.1^ENSG00000254701.3

chr5:70197255:-

ZNF623^ENSG00000183309.12

chr8:143649898:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2275:16193:3354

YES_LDAS

0.0006

1.9329

1.7819

"[""INTERCHROMOSOMAL[chr5--chr8]""]"

chr5:70197255-chr8:143649898

False

Read

count

too

low:

FAIL

AC136944.2--KCNE3

0.5

0.0

INCL_NON_REF_SPLICE

AC136944.2^ENSG00000261200.1

chr16:33545032:-

KCNE3^ENSG00000175538.11

chr11:74457463:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2158:45633:14298

YES_LDAS

0.0017

1.3996

1.4716

"[""INTERCHROMOSOMAL[chr16--chr11]""]"

chr16:33545032-chr11:74457463

False

Read

count

too

low:

FAIL

AC136604.2--USP39

0.5

0.0

ONLY_REF_SPLICE

AC136604.2^ENSG00000250999.2

chr5:179658481:+

USP39^ENSG00000168883.20

chr2:85619220:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1387:15344:7656

YES_LDAS

0.0017

1.5628

1.7819

"[""INTERCHROMOSOMAL[chr5--chr2]""]"

chr5:179658481-chr2:85619220

False

Read

count

too

low:

FAIL

AC136604.2--DBNL

1.0

0.0

ONLY_REF_SPLICE

AC136604.2^ENSG00000250999.2

chr5:179658481:+

DBNL^ENSG00000136279.21

chr7:44059354:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1386:20740:27848

NO_LDAS

0.0034

1.5628

1.8062

"[""INTERCHROMOSOMAL[chr5--chr7]""]"

chr5:179658481-chr7:44059354

False

Read

count

too

low:

FAIL

AC135731.1--MVK

0.5

0.0

INCL_NON_REF_SPLICE

AC135731.1^ENSG00000259993.1

chr15:30225060:+

MVK^ENSG00000110921.14

chr12:109590846:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1320:26306:9015

NO_LDAS

0.0017

1.231

1.8892

"[""INTERCHROMOSOMAL[chr15--chr12]""]"

chr15:30225060-chr12:109590846

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC135731.1--GYG2P1

0.5

0.0

INCL_NON_REF_SPLICE

AC135731.1^ENSG00000259993.1

chr15:30225060:+

GYG2P1^ENSG00000206159.11

chrY:12398699:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2458:5029:24288

NO_LDAS

0.0017

1.231

1.9656

"[""INTERCHROMOSOMAL[chr15--chrY]""]"

chr15:30225060-chrY:12398699

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC135178.7--AC007182.2

1.0

0.0

INCL_NON_REF_SPLICE

AC135178.7^ENSG00000271029.1

chr17:8296669:-

AC007182.2^ENSG00000242951.1

chr14:75595935:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2180:10959:11215

NO_LDAS

0.0034

1.7465

1.9899

"[""INTERCHROMOSOMAL[chr17--chr14]""]"

chr17:8296669-chr14:75595935

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC134407.1--H2BC18

0.5

0.0

INCL_NON_REF_SPLICE

AC134407.1^ENSG00000266717.1

chr17:67951186:-

H2BC18^ENSG00000203814.6

chr1:149812182:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2370:37672:28198

NO_LDAS

0.0017

1.5628

1.6729

"[""INTERCHROMOSOMAL[chr17--chr1]""]"

chr17:67951186-chr1:149812182

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC127502.3--AC127502.1

0.25

0.0

ONLY_REF_SPLICE

AC127502.3^ENSG00000283345.1

chr15:30513698:+

AC127502.1^ENSG00000215302.8

chr15:30474356:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1360:33028:1631

YES_LDAS

0.0009

1.5329

1.9656

"[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[246]""]"

chr15:30513698-chr15:30474356

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AC124076.1--GALC

1.0

0.0

INCL_NON_REF_SPLICE

AC124076.1^ENSG00000274489.1

chr8:36795669:-

GALC^ENSG00000054983.17

chr14:87933981:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2397:38254:15279

NO_LDAS

0.0034

1.5219

1.8295

"[""INTERCHROMOSOMAL[chr8--chr14]""]"

chr8:36795669-chr14:87933981

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC117481.1--ADGRG2

0.5

0.0

INCL_NON_REF_SPLICE

AC117481.1^ENSG00000287398.1

chr3:75214595:+

ADGRG2^ENSG00000173698.18

chrX:19122534:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1294:51498:13751

YES_LDAS

0.0017

1.6402

0.8366

"[""INTERCHROMOSOMAL[chr3--chrX]""]"

chr3:75214595-chrX:19122534

False

Read

count

too

low:

FAIL

AC114763.1--CCAR2

0.33

0.0

INCL_NON_REF_SPLICE

AC114763.1^ENSG00000228043.5

chr2:138477050:-

CCAR2^ENSG00000158941.16

chr8:22620339:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1231:30140:22467

NO_LDAS

0.0011

1.9329

1.5628

"[""INTERCHROMOSOMAL[chr2--chr8]""]"

chr2:138477050-chr8:22620339

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC114271.1--Z97205.2

0.33

0.0

INCL_NON_REF_SPLICE

AC114271.1^ENSG00000274425.1

chr19:10335876:+

Z97205.2^ENSG00000260422.1

chr6:164085207:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2236:50875:22565

NO_LDAS

0.0011

1.9086

1.6895

"[""INTERCHROMOSOMAL[chr19--chr6]""]"

chr19:10335876-chr6:164085207

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC109322.2--LAMB3

0.5

0.0

INCL_NON_REF_SPLICE

AC109322.2^ENSG00000288096.1

chr8:143889918:+

LAMB3^ENSG00000196878.15

chr1:209623622:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1297:35285:18459

NO_LDAS

0.0017

1.7819

1.6895

"[""INTERCHROMOSOMAL[chr8--chr1]""]"

chr8:143889918-chr1:209623622

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC107375.1--AC100858.1

0.5

0.0

INCL_NON_REF_SPLICE

AC107375.1^ENSG00000259891.1

chr8:140507837:-

AC100858.1^ENSG00000255313.2

chr8:124936509:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2338:9519:19538

NO_LDAS

0.0017

1.6895

1.4295

"[""INTRACHROMOSOMAL[chr8:15.56Mb]""]"

chr8:140507837-chr8:124936509

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC107375.1--AC006197.2

0.5

0.0

INCL_NON_REF_SPLICE

AC107375.1^ENSG00000259891.1

chr8:140507837:-

AC006197.2^ENSG00000286591.1

chr12:41989062:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2338:9519:19538

NO_LDAS

0.0017

1.6895

1.3996

"[""INTERCHROMOSOMAL[chr8--chr12]""]"

chr8:140507837-chr12:41989062

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC106795.1--UTRN

0.5

0.0

INCL_NON_REF_SPLICE

AC106795.1^ENSG00000170089.15

chr5:177931854:+

UTRN^ENSG00000152818.18

chr6:144577138:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1246:36814:22509

NO_LDAS

0.0017

1.8892

1.8323

"[""INTERCHROMOSOMAL[chr5--chr6]""]"

chr5:177931854-chr6:144577138

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC106771.1--ATL2

1.0

0.0

INCL_NON_REF_SPLICE

AC106771.1^ENSG00000248783.1

chr5:12553856:-

ATL2^ENSG00000119787.14

chr2:38294357:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1246:11096:11677

YES_LDAS

0.0034

1.8256

1.9899

"[""INTERCHROMOSOMAL[chr5--chr2]""]"

chr5:12553856-chr2:38294357

False

Read

count

too

low:

FAIL

AC104938.1--SLTM

1.0

0.0

ONLY_REF_SPLICE

AC104938.1^ENSG00000260037.5

chr15:71818752:+

SLTM^ENSG00000137776.17

chr15:58916999:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1471:6380:23658

YES_LDAS

0.0034

1.9329

1.5546

"[""INTRACHROMOSOMAL[chr15:12.88Mb]""]"

chr15:71818752-chr15:58916999

False

Read

count

too

low:

FAIL

AC104590.1--AC137932.3

1.0

0.0

INCL_NON_REF_SPLICE

AC104590.1^ENSG00000259251.2

chr15:62060988:+

AC137932.3^ENSG00000268218.1

chr16:89271283:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2142:27026:14774

YES_LDAS

0.0034

1.9329

1.8295

"[""INTERCHROMOSOMAL[chr15--chr16]""]"

chr15:62060988-chr16:89271283

False

Read

count

too

low:

FAIL

AC104532.2--PTCD3

1.0

0.0

INCL_NON_REF_SPLICE

AC104532.2^ENSG00000267571.1

chr19:5913781:-

PTCD3^ENSG00000132300.19

chr2:86139598:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1477:5142:21066

NO_LDAS

0.0034

1.9329

1.9899

"[""INTERCHROMOSOMAL[chr19--chr2]""]"

chr19:5913781-chr2:86139598

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC104162.1--THOC7

1.0

0.0

ONLY_REF_SPLICE

AC104162.1^ENSG00000224479.6

chr3:63826824:-

THOC7^ENSG00000163634.12

chr3:63839773:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2128:19923:11355

YES_LDAS

0.0034

1.9329

1.8892

"[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[6425]""]"

chr3:63826824-chr3:63839773

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AC104123.1--CAST

1.0

0.0

ONLY_REF_SPLICE

AC104123.1^ENSG00000251314.2

chr5:96379652:+

CAST^ENSG00000153113.24

chr5:96675539:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2468:22172:21500

NO_LDAS

0.0034

1.7819

1.8295

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.11Mb]""]"

chr5:96379652-chr5:96675539

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AC104088.1--ITGA6

0.5

0.0

ONLY_REF_SPLICE

AC104088.1^ENSG00000232555.2

chr2:172323515:+

ITGA6^ENSG00000091409.15

chr2:172465539:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2226:20173:14172

YES_LDAS

0.0017

1.9329

1.4566

"[""INTRACHROMOSOMAL[chr2:0.06Mb]"",""NEIGHBORS[56953]""]"

chr2:172323515-chr2:172465539

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AC099681.3--EIF4H

0.5

0.0

INCL_NON_REF_SPLICE

AC099681.3^ENSG00000233977.1

chr7:55593160:+

EIF4H^ENSG00000106682.16

chr7:74194786:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1377:46539:21584

NO_LDAS

0.0017

1.8295

1.5656

"[""INTRACHROMOSOMAL[chr7:18.58Mb]""]"

chr7:55593160-chr7:74194786

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC097500.1--LINC01473

1.0

0.0

INCL_NON_REF_SPLICE

AC097500.1^ENSG00000287129.1

chr2:185950644:-

LINC01473^ENSG00000237877.7

chr2:186083221:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1432:31249:7684

YES_LDAS

0.0034

1.9899

1.4716

"[""INTRACHROMOSOMAL[chr2:0.08Mb]"",""LOCAL_REARRANGEMENT:-:[79713]""]"

chr2:185950644-chr2:186083221

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AC095032.1--DENND1A

1.0

0.0

INCL_NON_REF_SPLICE

AC095032.1^ENSG00000224613.7

chr1:103416947:-

DENND1A^ENSG00000119522.16

chr9:123450716:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1194:12326:15349

NO_LDAS

0.0034

1.5329

1.9656

"[""INTERCHROMOSOMAL[chr1--chr9]""]"

chr1:103416947-chr9:123450716

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC093642.2--AC004466.1

1.0

0.0

INCL_NON_REF_SPLICE

AC093642.2^ENSG00000280119.1

chr2:242001616:+

AC004466.1^ENSG00000268069.2

chr12:47785809:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2416:14583:29375

NO_LDAS

0.0034

1.8256

1.8295

"[""INTERCHROMOSOMAL[chr2--chr12]""]"

chr2:242001616-chr12:47785809

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC093323.1--SDC2

1.0

0.0

INCL_NON_REF_SPLICE

AC093323.1^ENSG00000170846.17

chr4:6674264:+

SDC2^ENSG00000169439.12

chr8:96493774:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1385:50195:14802

YES_LDAS

0.0034

1.4566

1.6895

"[""INTERCHROMOSOMAL[chr4--chr8]""]"

chr4:6674264-chr8:96493774

False

Read

count

too

low:

FAIL

AC092807.3--DDAH1

1.0

0.0

ONLY_REF_SPLICE

AC092807.3^ENSG00000282057.1

chr1:85577984:-

DDAH1^ENSG00000153904.21

chr1:85358847:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1448:11072:17913

YES_LDAS

0.0034

1.8062

"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.02Mb]"",""NEIGHBORS[17122]""]"

chr1:85577984-chr1:85358847

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

AC092681.2--RSRP1

1.0

0.0

INCL_NON_REF_SPLICE

AC092681.2^ENSG00000260555.1

chr7:150003135:+

RSRP1^ENSG00000117616.18

chr1:25338068:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1203:14195:24807

YES_LDAS

0.0034

1.8256

1.8323

"[""INTERCHROMOSOMAL[chr7--chr1]""]"

chr7:150003135-chr1:25338068

False

Read

count

too

low:

FAIL

AC092384.2--ESPN

1.0

0.0

INCL_NON_REF_SPLICE

AC092384.2^ENSG00000259881.1

chr16:88884848:+

ESPN^ENSG00000187017.17

chr1:6452079:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1422:24016:3985

NO_LDAS

0.0034

1.2366

1.3383

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:88884848-chr1:6452079

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC092279.1--KIAA1841

1.0

0.0

INCL_NON_REF_SPLICE

AC092279.1^ENSG00000268362.6

chr19:24058735:+

KIAA1841^ENSG00000162929.14

chr2:61075061:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1391:12059:19118

YES_LDAS

0.0034

1.3996

1.8892

"[""INTERCHROMOSOMAL[chr19--chr2]""]"

chr19:24058735-chr2:61075061

False

Read

count

too

low:

FAIL

AC092112.1--MYO1F

1.0

0.0

ONLY_REF_SPLICE

AC092112.1^ENSG00000256084.1

chr12:14216793:+

MYO1F^ENSG00000142347.19

chr19:8540028:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1384:37971:28744

YES_LDAS

0.0034

1.9899

1.8062

"[""INTERCHROMOSOMAL[chr12--chr19]""]"

chr12:14216793-chr19:8540028

False

Read

count

too

low:

FAIL

AC091057.6--ARHGAP11A

0.5

0.0

ONLY_REF_SPLICE

AC091057.6^ENSG00000285035.1

chr15:30647714:+

ARHGAP11A^ENSG00000198826.11

chr15:32620108:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2278:6550:27455

YES_LDAS

0.0017

1.9656

1.5656

"[""INTRACHROMOSOMAL[chr15:1.89Mb]""]"

chr15:30647714-chr15:32620108

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AC091042.1--AC018695.1

1.0

0.0

INCL_NON_REF_SPLICE

AC091042.1^ENSG00000265936.1

chr18:67375292:+

AC018695.1^ENSG00000214259.3

chr16:85815884:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1451:16201:19931

NO_LDAS

0.0034

1.7819

1.9899

"[""INTERCHROMOSOMAL[chr18--chr16]""]"

chr18:67375292-chr16:85815884

True

aih_curated_blacklist

score(3)

aih_curated_blacklist

score(3)

FAIL

AC090403.1--SNRPG

1.0

0.0

INCL_NON_REF_SPLICE

AC090403.1^ENSG00000264151.6

chr18:27392780:-

SNRPG^ENSG00000143977.14

chr2:70288095:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1214:32114:12770

NO_LDAS

0.0034

1.5058

1.6729

"[""INTERCHROMOSOMAL[chr18--chr2]""]"

chr18:27392780-chr2:70288095

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC090403.1--AC132008.2

0.17

0.0

INCL_NON_REF_SPLICE

AC090403.1^ENSG00000264151.6

chr18:27392780:-

AC132008.2^ENSG00000214135.8

chr3:197622346:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1288:45422:20996

NO_LDAS

0.0006

1.5058

1.6895

"[""INTERCHROMOSOMAL[chr18--chr3]""]"

chr18:27392780-chr3:197622346

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC083837.1--NAMPT

0.5

0.0

ONLY_REF_SPLICE

AC083837.1^ENSG00000285744.1

chr8:78805695:+

NAMPT^ENSG00000105835.13

chr7:106254504:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1390:9802:2990

YES_LDAS

0.0017

1.9656

1.8256

"[""INTERCHROMOSOMAL[chr8--chr7]""]"

chr8:78805695-chr7:106254504

False

Read

count

too

low:

FAIL

AC079466.2--EIF3E

0.33

0.0

INCL_NON_REF_SPLICE

AC079466.2^ENSG00000267537.1

chr19:28648275:-

EIF3E^ENSG00000104408.11

chr8:108219911:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1497:26532:26699

NO_LDAS

0.0011

1.9656

1.8295

"[""INTERCHROMOSOMAL[chr19--chr8]""]"

chr19:28648275-chr8:108219911

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC079465.1--MARCO

0.5

0.0

INCL_NON_REF_SPLICE

AC079465.1^ENSG00000232633.4

chr5:113437040:+

MARCO^ENSG00000019169.11

chr2:118990603:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2234:1663:29445

NO_LDAS

0.0017

1.7819

1.231

"[""INTERCHROMOSOMAL[chr5--chr2]""]"

chr5:113437040-chr2:118990603

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC079193.1--AC025423.3

0.25

0.0

INCL_NON_REF_SPLICE

AC079193.1^ENSG00000244113.1

chr8:17150668:-

AC025423.3^ENSG00000256678.1

chr12:68805439:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1442:33756:16203

NO_LDAS

0.0009

1.8256

1.4566

"[""INTERCHROMOSOMAL[chr8--chr12]""]"

chr8:17150668-chr12:68805439

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC073529.1--MID1

1.0

0.0

ONLY_REF_SPLICE

AC073529.1^ENSG00000234129.8

chrX:11055936:-

MID1^ENSG00000101871.16

chrX:10567603:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1338:39266:13639

YES_LDAS

0.0034

1.9219

1.9656

"[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""NEIGHBORS[13924]""]"

chrX:11055936-chrX:10567603

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AC073343.2--C7orf26

1.0

0.0

INCL_NON_REF_SPLICE

AC073343.2^ENSG00000228010.6

chr7:6666278:+

C7orf26^ENSG00000146576.13

chr7:6594435:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2423:17123:28086

YES_LDAS

0.0034

1.9656

1.7819

"[""INTRACHROMOSOMAL[chr7:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[55248]""]"

chr7:6666278-chr7:6594435

False

Read

count

too

low:

FAIL

AC069528.2--PLSCR1

1.0

0.0

INCL_NON_REF_SPLICE

AC069528.2^ENSG00000279320.1

chr3:146505279:-

PLSCR1^ENSG00000188313.13

chr3:146517167:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2253:51304:28380

YES_LDAS

0.0034

1.8062

1.6895

"[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[8620]""]"

chr3:146505279-chr3:146517167

False

Read

count

too

low:

FAIL

AC068587.4--RIN3

0.1

0.0

ONLY_REF_SPLICE

AC068587.4^ENSG00000283674.3

chr8:12601158:-

RIN3^ENSG00000100599.16

chr14:92555751:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1408:34242:2499

YES_LDAS

0.0003

1.3996

1.8062

"[""INTERCHROMOSOMAL[chr8--chr14]""]"

chr8:12601158-chr14:92555751

False

Read

count

too

low:

FAIL

AC067942.1--RPS6P14

0.5

0.0

INCL_NON_REF_SPLICE

AC067942.1^ENSG00000227304.3

chr4:82495038:-

RPS6P14^ENSG00000225482.1

chr10:48293287:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2245:23806:7684

YES_LDAS

0.0017

1.8323

1.8062

"[""INTERCHROMOSOMAL[chr4--chr10]""]"

chr4:82495038-chr10:48293287

False

Read

count

too

low:

FAIL

AC067904.3--BUB1B

0.33

0.0

INCL_NON_REF_SPLICE

AC067904.3^ENSG00000275115.1

chr8:27010737:+

BUB1B^ENSG00000156970.13

chr15:40200268:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1388:4948:26783

YES_LDAS

0.0011

1.4295

1.8295

"[""INTERCHROMOSOMAL[chr8--chr15]""]"

chr8:27010737-chr15:40200268

False

Read

count

too

low:

FAIL

AC060780.1--TRIM22

1.0

0.0

ONLY_REF_SPLICE

AC060780.1^ENSG00000267002.4

chr17:43170126:-

TRIM22^ENSG00000132274.16

chr11:5698315:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1192:12415:10991

YES_LDAS

0.0034

1.6402

1.7819

"[""INTERCHROMOSOMAL[chr17--chr11]""]"

chr17:43170126-chr11:5698315

False

Read

count

too

low:

FAIL

AC055811.1--TMEM150C

1.0

0.0

INCL_NON_REF_SPLICE

AC055811.1^ENSG00000263624.1

chr17:17168336:-

TMEM150C^ENSG00000249242.8

chr4:82484992:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1148:27543:23490

NO_LDAS

0.0034

1.5329

1.9656

"[""INTERCHROMOSOMAL[chr17--chr4]""]"

chr17:17168336-chr4:82484992

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC027097.1--AC068531.2

1.0

0.0

INCL_NON_REF_SPLICE

AC027097.1^ENSG00000267040.6

chr18:57642052:+

AC068531.2^ENSG00000248895.1

chr17:48881120:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2390:13863:3550

YES_LDAS

0.0034

1.7232

1.5656

"[""INTERCHROMOSOMAL[chr18--chr17]""]"

chr18:57642052-chr17:48881120

False

Read

count

too

low:

FAIL

AC025580.2--CKAP5

1.0

0.0

ONLY_REF_SPLICE

AC025580.2^ENSG00000259354.5

chr15:45450290:+

CKAP5^ENSG00000175216.15

chr11:46762193:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1114:4665:17352

YES_LDAS

0.0034

1.9899

1.8892

"[""INTERCHROMOSOMAL[chr15--chr11]""]"

chr15:45450290-chr11:46762193

False

Read

count

too

low:

FAIL

AC022154.1--ITPK1

1.0

0.0

INCL_NON_REF_SPLICE

AC022154.1^ENSG00000268093.1

chr19:48624059:-

ITPK1^ENSG00000100605.17

chr14:92941991:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2261:21112:15124

NO_LDAS

0.0034

1.3753

1.7465

"[""INTERCHROMOSOMAL[chr19--chr14]""]"

chr19:48624059-chr14:92941991

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC021851.1--NUP35

1.0

0.0

ONLY_REF_SPLICE

AC021851.1^ENSG00000272800.3

chr2:183178907:+

NUP35^ENSG00000163002.13

chr2:183151508:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2133:13701:25325

NO_LDAS

0.0034

1.2867

1.8256

"[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]"

chr2:183178907-chr2:183151508

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AC021739.2--MIGA2

0.33

0.0

ONLY_REF_SPLICE

AC021739.2^ENSG00000259407.1

chr15:85750242:-

MIGA2^ENSG00000148343.18

chr9:129048427:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1232:22778:29221

NO_LDAS

0.0011

1.9329

"[""INTERCHROMOSOMAL[chr15--chr9]""]"

chr15:85750242-chr9:129048427

False

Read

count

too

low:

FAIL

AC019205.1--CLASP1

1.0

0.0

ONLY_REF_SPLICE

AC019205.1^ENSG00000229852.4

chr6:73263416:+

CLASP1^ENSG00000074054.20

chr2:121430177:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1245:42939:1981

YES_LDAS

0.0034

1.8892

1.9329

"[""INTERCHROMOSOMAL[chr6--chr2]""]"

chr6:73263416-chr2:121430177

False

Read

count

too

low:

FAIL

AC018653.3--PRR14

1.0

0.0

INCL_NON_REF_SPLICE

AC018653.3^ENSG00000256967.1

chr12:7129095:-

PRR14^ENSG00000156858.12

chr16:30654649:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2181:46061:20841

YES_LDAS

0.0034

1.9219

1.2419

"[""INTERCHROMOSOMAL[chr12--chr16]""]"

chr12:7129095-chr16:30654649

False

Read

count

too

low:

FAIL

AC018638.4--PRR13

0.1

0.0

INCL_NON_REF_SPLICE

AC018638.4^ENSG00000243302.3

chr7:128652232:+

PRR13^ENSG00000205352.11

chr12:53443529:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1369:31338:22299

YES_LDAS

0.0003

1.8323

1.7465

"[""INTERCHROMOSOMAL[chr7--chr12]""]"

chr7:128652232-chr12:53443529

False

Read

count

too

low:

FAIL

AC018638.2--AC110079.1

0.5

0.0

INCL_NON_REF_SPLICE

AC018638.2^ENSG00000230715.3

chr7:128652975:+

AC110079.1^ENSG00000260404.3

chr4:118633668:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1204:26742:24877

YES_LDAS

0.0017

1.7056

1.8295

"[""INTERCHROMOSOMAL[chr7--chr4]""]"

chr7:128652975-chr4:118633668

False

Read

count

too

low:

FAIL

AC016831.6--MKLN1

1.0

0.0

ONLY_REF_SPLICE

AC016831.6^ENSG00000285106.2

chr7:131052425:-

MKLN1^ENSG00000128585.18

chr7:131375424:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2246:20732:9141

YES_LDAS

0.0034

1.9656

1.8256

"[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[65]""]"

chr7:131052425-chr7:131375424

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AC016831.1--LARP6

1.0

0.0

INCL_NON_REF_SPLICE

AC016831.1^ENSG00000226380.9

chr7:130878104:-

LARP6^ENSG00000166173.11

chr15:70832839:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1312:9090:12910

NO_LDAS

0.0034

1.7819

1.9656

"[""INTERCHROMOSOMAL[chr7--chr15]""]"

chr7:130878104-chr15:70832839

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC016596.2--ELOF1

0.2

0.0

INCL_NON_REF_SPLICE

AC016596.2^ENSG00000264281.3

chr5:55944802:+

ELOF1^ENSG00000130165.10

chr19:11553658:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2451:32058:5078

YES_LDAS

0.0007

1.8295

1.3383

"[""INTERCHROMOSOMAL[chr5--chr19]""]"

chr5:55944802-chr19:11553658

False

Read

count

too

low:

FAIL

AC012533.1--KIF5A

1.0

0.0

INCL_NON_REF_SPLICE

AC012533.1^ENSG00000286763.1

chr8:80929692:+

KIF5A^ENSG00000155980.13

chr12:57571752:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1266:51198:29739

YES_LDAS

0.0034

1.8062

1.7968

"[""INTERCHROMOSOMAL[chr8--chr12]""]"

chr8:80929692-chr12:57571752

False

Read

count

too

low:

FAIL

AC011611.3--MRPS16

1.0

0.0

INCL_NON_REF_SPLICE

AC011611.3^ENSG00000257453.1

chr12:76030594:+

MRPS16^ENSG00000182180.14

chr10:73250671:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1254:6210:16329

NO_LDAS

0.0034

1.7465

1.6895

"[""INTERCHROMOSOMAL[chr12--chr10]""]"

chr12:76030594-chr10:73250671

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC011447.3--AC060780.1

1.0

0.0

INCL_NON_REF_SPLICE

AC011447.3^ENSG00000267383.7

chr19:20176409:-

AC060780.1^ENSG00000267002.4

chr17:43159426:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2357:10773:15713

YES_LDAS

0.0034

1.8892

1.4256

"[""INTERCHROMOSOMAL[chr19--chr17]""]"

chr19:20176409-chr17:43159426

False

Read

count

too

low:

FAIL

AC011287.1--ZNF131

1.0

0.0

ONLY_REF_SPLICE

AC011287.1^ENSG00000229618.3

chr7:12802732:+

ZNF131^ENSG00000172262.11

chr5:43122039:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1308:23191:10122

NO_LDAS

0.0034

1.8295

1.5058

"[""INTERCHROMOSOMAL[chr7--chr5]""]"

chr7:12802732-chr5:43122039

False

Read

count

too

low:

FAIL

AC010536.1--LEMD1-DT

1.0

0.0

INCL_NON_REF_SPLICE

AC010536.1^ENSG00000226180.3

chr16:87693511:-

LEMD1-DT^ENSG00000224717.1

chr1:205467576:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2437:34622:15068

YES_LDAS

0.0034

1.053

1.7819

"[""INTERCHROMOSOMAL[chr16--chr1]""]"

chr16:87693511-chr1:205467576

False

Read

count

too

low:

FAIL

AC010326.4--ZNF417

1.0

0.0

INCL_NON_REF_SPLICE

AC010326.4^ENSG00000270804.1

chr19:57868192:+

ZNF417^ENSG00000173480.11

chr19:57912189:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1380:19591:18039

YES_LDAS

0.0034

1.8256

1.9086

"[""INTRACHROMOSOMAL[chr19:0.03Mb]"",""LOCAL_INVERSION:+:-:[31462]""]"

chr19:57868192-chr19:57912189

False

Read

count

too

low:

FAIL

AC010245.1--CSNK1A1

1.0

0.0

INCL_NON_REF_SPLICE

AC010245.1^ENSG00000248881.1

chr5:75599084:-

CSNK1A1^ENSG00000113712.19

chr5:149531515:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2315:20554:21864

YES_LDAS

0.0034

0.6998

1.8295

"[""INTRACHROMOSOMAL[chr5:73.89Mb]""]"

chr5:75599084-chr5:149531515

False

Read

count

too

low:

FAIL

AC009061.2--TXNL4A

1.0

0.0

ONLY_REF_SPLICE

AC009061.2^ENSG00000270049.3

chr16:67484328:+

TXNL4A^ENSG00000141759.15

chr18:79973856:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2210:16525:2976

YES_LDAS

0.0034

1.8062

1.7968

"[""INTERCHROMOSOMAL[chr16--chr18]""]"

chr16:67484328-chr18:79973856

False

Read

count

too

low:

FAIL

AC009041.2--AC103564.2

0.33

0.0

INCL_NON_REF_SPLICE

AC009041.2^ENSG00000261720.1

chr16:1066520:+

AC103564.2^ENSG00000232760.1

chr2:131836085:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1115:3314:25493

YES_LDAS

0.0011

1.6895

1.7819

"[""INTERCHROMOSOMAL[chr16--chr2]""]"

chr16:1066520-chr2:131836085

False

Read

count

too

low:

FAIL

AC008875.3--SELENOP

1.0

0.0

ONLY_REF_SPLICE

AC008875.3^ENSG00000287263.1

chr5:42985606:-

SELENOP^ENSG00000250722.6

chr5:42808366:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1181:36005:2808

NO_LDAS

0.0034

1.9086

1.7056

"[""INTRACHROMOSOMAL[chr5:0.10Mb]"",""NEIGHBORS[96244]""]"

chr5:42985606-chr5:42808366

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AC008740.1--CRYM-AS1

1.0

0.0

INCL_NON_REF_SPLICE

AC008740.1^ENSG00000257403.2

chr16:21352138:+

CRYM-AS1^ENSG00000189149.12

chr16:21338921:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1206:8985:19594

YES_LDAS

0.0034

1.7232

1.9656

"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]"

chr16:21352138-chr16:21338921

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AC008738.4--AC092329.4

1.0

0.0

INCL_NON_REF_SPLICE

AC008738.4^ENSG00000267714.2

chr19:33222285:+

AC092329.4^ENSG00000284428.1

chr19:23269321:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2239:7909:9519

NO_LDAS

0.0034

1.9329

1.7968

"[""INTRACHROMOSOMAL[chr19:9.94Mb]""]"

chr19:33222285-chr19:23269321

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC007566.2--CHCHD4

1.0

0.0

INCL_NON_REF_SPLICE

AC007566.2^ENSG00000270453.1

chr7:92442479:+

CHCHD4^ENSG00000163528.13

chr3:14112973:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1233:33036:10781

NO_LDAS

0.0034

1.4566

0.971

"[""INTERCHROMOSOMAL[chr7--chr3]""]"

chr7:92442479-chr3:14112973

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC006064.4--NOL6

1.0

0.0

INCL_NON_REF_SPLICE

AC006064.4^ENSG00000269968.1

chr12:6538185:-

NOL6^ENSG00000165271.17

chr9:33468866:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2181:3751:13499

YES_LDAS

0.0034

1.5656

1.5329

"[""INTERCHROMOSOMAL[chr12--chr9]""]"

chr12:6538185-chr9:33468866

False

Read

count

too

low:

FAIL

AC006001.3--EXOC4

0.5

0.0

ONLY_REF_SPLICE

AC006001.3^ENSG00000229180.7

chr7:66554585:-

EXOC4^ENSG00000131558.15

chr7:133630045:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1231:23191:29683

NO_LDAS

0.0017

1.8062

1.9219

"[""INTRACHROMOSOMAL[chr7:66.66Mb]""]"

chr7:66554585-chr7:133630045

False

Read

count

too

low:

FAIL

AC005005.3--TMEM39B

1.0

0.0

INCL_NON_REF_SPLICE

AC005005.3^ENSG00000273387.1

chr22:31083240:-

TMEM39B^ENSG00000121775.18

chr1:32102539:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1310:23134:27427

NO_LDAS

0.0034

1.6729

1.8295

"[""INTERCHROMOSOMAL[chr22--chr1]""]"

chr22:31083240-chr1:32102539

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC004980.2--AC004980.1

0.5

0.0

INCL_NON_REF_SPLICE

AC004980.2^ENSG00000214243.3

chr7:76650398:-

AC004980.1^ENSG00000205485.13

chr7:76551420:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2162:41733:7320

YES_LDAS

0.0017

1.9656

1.8323

"[""INTRACHROMOSOMAL[chr7:0.02Mb]"",""LOCAL_INVERSION:-:+:[22419]""]"

chr7:76650398-chr7:76551420

True

pair|recurrent

breakpoints

aih_curated_blacklist

score(3)

Blacklisted;

aih_curated_blacklist

score(3)

FAIL

AC004980.1--SLC39A4

1.0

0.0

INCL_NON_REF_SPLICE

AC004980.1^ENSG00000205485.13

chr7:76549861:+

SLC39A4^ENSG00000147804.10

chr8:144415398:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1305:8540:20197

NO_LDAS

0.0034

1.5058

1.7232

"[""INTERCHROMOSOMAL[chr7--chr8]""]"

chr7:76549861-chr8:144415398

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

AC004951.3--POLD2

0.33

0.0

INCL_NON_REF_SPLICE

AC004951.3^ENSG00000241057.2

chr7:43961595:-

POLD2^ENSG00000106628.12

chr7:44118064:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1450:17301:4937

YES_LDAS

0.0011

1.9329

1.5546

"[""INTRACHROMOSOMAL[chr7:0.14Mb]""]"

chr7:43961595-chr7:44118064

False

Read

count

too

low:

FAIL

AC004951.2--AC004951.3

0.33

0.0

ONLY_REF_SPLICE

AC004951.2^ENSG00000239556.4

chr7:43986601:-

AC004951.3^ENSG00000241057.2

chr7:43973323:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2144:48019:8679

YES_LDAS

0.0011

1.8892

1.9329

"[""INTRACHROMOSOMAL[chr7:0.01Mb]"",""NEIGHBORS[11672]""]"

chr7:43986601-chr7:43973323

False

Read

count

too

low:

FAIL

AC004834.1--CHMP1A

1.0

0.0

ONLY_REF_SPLICE

AC004834.1^ENSG00000284523.2

chr7:99290877:-

CHMP1A^ENSG00000131165.16

chr16:89647331:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1143:1841:18431

YES_LDAS

0.0034

1.7056

1.8892

"[""INTERCHROMOSOMAL[chr7--chr16]""]"

chr7:99290877-chr16:89647331

False

Read

count

too

low:

FAIL

AC002398.2--NOM1

1.0

0.0

INCL_NON_REF_SPLICE

AC002398.2^ENSG00000267328.1

chr19:35754701:+

NOM1^ENSG00000146909.8

chr7:156950534:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:2381:40083:27721

YES_LDAS

0.0034

1.053

1.4716

"[""INTERCHROMOSOMAL[chr19--chr7]""]"

chr19:35754701-chr7:156950534

False

Read

count

too

low:

FAIL

AC002398.2--GJA9

1.0

0.0

INCL_NON_REF_SPLICE

AC002398.2^ENSG00000267328.1

chr19:35755326:+

GJA9^ENSG00000131233.10

chr1:38876382:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1172:18782:14648

YES_LDAS

0.0034

1.6402

1.9656

"[""INTERCHROMOSOMAL[chr19--chr1]""]"

chr19:35755326-chr1:38876382

False

Read

count

too

low:

FAIL

ABTB2--RALGPS1

1.0

0.0

ONLY_REF_SPLICE

ABTB2^ENSG00000166016.6

chr11:34356701:-

RALGPS1^ENSG00000136828.19

chr9:126962225:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1240:47857:28156

YES_LDAS

0.0034

1.8062

1.9656

"[""INTERCHROMOSOMAL[chr11--chr9]""]"

chr11:34356701-chr9:126962225

False

Read

count

too

low:

FAIL

ABLIM3--RPL24P9

1.0

0.0

INCL_NON_REF_SPLICE

ABLIM3^ENSG00000173210.20

chr5:149251419:+

RPL24P9^ENSG00000225722.1

chrX:3953084:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1175:23514:10626

NO_LDAS

0.0034

1.8295

1.9656

"[""INTERCHROMOSOMAL[chr5--chrX]""]"

chr5:149251419-chrX:3953084

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ABHD17B--CENPP

1.0

0.0

ONLY_REF_SPLICE

ABHD17B^ENSG00000107362.14

chr9:71910634:-

CENPP^ENSG00000188312.14

chr9:92379763:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1288:3411:13163

YES_LDAS

0.0034

1.8323

1.231

"[""INTRACHROMOSOMAL[chr9:20.41Mb]""]"

chr9:71910634-chr9:92379763

False

Read

count

too

low:

FAIL

ABCD4--NUP107

1.0

0.0

ONLY_REF_SPLICE

ABCD4^ENSG00000119688.21

chr14:74300150:-

NUP107^ENSG00000111581.10

chr12:68715627:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1216:25658:13863

YES_LDAS

0.0034

1.8892

1.8295

"[""INTERCHROMOSOMAL[chr14--chr12]""]"

chr14:74300150-chr12:68715627

False

Read

count

too

low:

FAIL

ABCD3--BCAR3

1.0

0.0

ONLY_REF_SPLICE

ABCD3^ENSG00000117528.14

chr1:94418588:+

BCAR3^ENSG00000137936.18

chr1:93706142:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1307:19073:28632

YES_LDAS

0.0034

1.6895

1.9329

"[""INTRACHROMOSOMAL[chr1:0.57Mb]""]"

chr1:94418588-chr1:93706142

False

Read

count

too

low:

FAIL

ABCA7--ABCA1

1.0

0.0

ONLY_REF_SPLICE

ABCA7^ENSG00000064687.13

chr19:1047654:+

ABCA1^ENSG00000165029.17

chr9:104824578:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2207:36135:2752

NO_LDAS

0.0034

1.9656

1.9899

"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr9]""]"

chr19:1047654-chr9:104824578

False

Excluded

annotation

pattern:

HGNC_GENEFAM

FAIL

ABCA3--CASKIN1

1.0

0.0

INCL_NON_REF_SPLICE

ABCA3^ENSG00000167972.14

chr16:2340586:-

CASKIN1^ENSG00000167971.16

chr16:2179067:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1255:37923:12882

NO_LDAS

0.0034

0.9183

"[""INTRACHROMOSOMAL[chr16:0.08Mb]"",""NEIGHBORS[79276]""]"

chr16:2340586-chr16:2179067

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

ABCA12--AC093422.1

1.0

0.0

INCL_NON_REF_SPLICE

ABCA12^ENSG00000144452.15

chr2:214931889:-

AC093422.1^ENSG00000213041.4

chr1:205202111:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:2247:35051:11944

YES_LDAS

0.0034

1.2419

0.9183

"[""INTERCHROMOSOMAL[chr2--chr1]""]"

chr2:214931889-chr1:205202111

False

Read

count

too

low:

FAIL

ABCA11P--FAM120B

0.11

0.0

ONLY_REF_SPLICE

ABCA11P^ENSG00000251595.7

chr4:472575:-

FAM120B^ENSG00000112584.14

chr6:170395487:+

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1204:19623:25017

NO_LDAS

0.0004

1.8892

1.4716

"[""INTERCHROMOSOMAL[chr4--chr6]""]"

chr4:472575-chr6:170395487

False

Read

count

too

low:

FAIL

ABCA11P--CHMP1A

1.0

0.0

ONLY_REF_SPLICE

ABCA11P^ENSG00000251595.7

chr4:472575:-

CHMP1A^ENSG00000131165.16

chr16:89647331:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:2297:14656:12238

YES_LDAS

0.0034

1.8892

"[""INTERCHROMOSOMAL[chr4--chr16]""]"

chr4:472575-chr16:89647331

True

pair|recurrent

breakpoints

Blacklisted

FAIL

AAK1--PCYT2

1.0

0.0

INCL_NON_REF_SPLICE

AAK1^ENSG00000115977.21

chr2:69461594:-

PCYT2^ENSG00000185813.11

chr17:81901407:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:8:1370:15829:7852

NO_LDAS

0.0034

0.5665

1.8323

"[""INTERCHROMOSOMAL[chr2--chr17]""]"

chr2:69461594-chr17:81901407

False

Excluded

SpliceType:

INCL_NON_REF_SPLICE

FAIL

CTSC--RAB38

1.0

0.5

ONLY_REF_SPLICE

CTSC^ENSG00000109861.17

chr11:88300530:-

RAB38^ENSG00000123892.12

chr11:88149955:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:7:1223:47704:16400

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1346:24469:27637

YES_LDAS

0.0051

1.9656

1.8062

"[""GTEx_recurrent_StarF2019"",""Babiceanu_Normal"",""ChimerSeq"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.09Mb]"",""NEIGHBORS[89626]""]"

chr11:88300530-chr11:88149955

True

pair|recurrent

breakpoints

Blacklisted

FAIL

CTSC--RAB38

1.0

0.5

ONLY_REF_SPLICE

CTSC^ENSG00000109861.17

chr11:88296133:-

RAB38^ENSG00000123892.12

chr11:88149955:-

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1217:23223:9618

&tih_rna_sample_00071_23KKJ7LT4_1@LH00166:227:23KKJ7LT4:6:1346:24469:27637

YES_LDAS

0.0051

1.9899

1.8062

"[""GTEx_recurrent_StarF2019"",""Babiceanu_Normal"",""ChimerSeq"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.09Mb]"",""NEIGHBORS[89626]""]"

chr11:88296133-chr11:88149955

True

pair|recurrent

breakpoints

Blacklisted

FAIL

1612 rows