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Filename
Quality_Metrics.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L008/Reports/Quality_Metrics.csv
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10.2 KB
Workflow Run
dev_rna_exp06_07-73d51683
Published
Jun 07, 2026 11:44 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
8 tih_rna_sample_00044_23KKJ7LT4_1 GCGCGGTTAA AAGCTATAGC 1 11954706542 11334849162 464587723995 38.86 0.95
8 tih_rna_sample_00044_23KKJ7LT4_1 GCGCGGTTAA AAGCTATAGC 2 11954706542 11364148353 465895059165 38.97 0.95
8 FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 TTCCTTGAGG TAAGACAGCA 1 10537742776 10142788497 413174317824 39.21 0.96
8 FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 TTCCTTGAGG TAAGACAGCA 2 10537742776 10066870064 411670283540 39.07 0.96
8 tih_rna_sample_00208_23KKJ7LT4_1 GAGTCGCTTC AGCGAAGATT 1 14477467770 13865768753 566078282096 39.10 0.96
8 tih_rna_sample_00208_23KKJ7LT4_1 GAGTCGCTTC AGCGAAGATT 2 14477467770 13726113054 563282690274 38.91 0.95
8 tih_rna_sample_00045_23KKJ7LT4_1 GTACGCTCAA ATTGATGGCG 1 12335242246 11650328193 478467769308 38.79 0.94
8 tih_rna_sample_00045_23KKJ7LT4_1 GTACGCTCAA ATTGATGGCG 2 12335242246 11656372334 479248597655 38.85 0.94
8 tih_rna_sample_00046_23KKJ7LT4_1 TAGAAGATCG CGACCAGTGT 1 11881407971 11237075975 461312045417 38.83 0.95
8 tih_rna_sample_00046_23KKJ7LT4_1 TAGAAGATCG CGACCAGTGT 2 11881407971 11238420071 461801668385 38.87 0.95
8 tih_rna_sample_00047_23KKJ7LT4_1 AACCTAGTGC TACAGGTCCT 1 15512788700 14702047676 602989529906 38.87 0.95
8 tih_rna_sample_00047_23KKJ7LT4_1 AACCTAGTGC TACAGGTCCT 2 15512788700 14735348731 604368119656 38.96 0.95
8 tih_rna_sample_00048_23KKJ7LT4_1 CGTGTATGTC GCATCTCTAT 1 12972949825 12146914504 500629826653 38.59 0.94
8 tih_rna_sample_00048_23KKJ7LT4_1 CGTGTATGTC GCATCTCTAT 2 12972949825 12284376807 504672122163 38.90 0.95
8 tih_rna_sample_00216_23KKJ7LT4_1 TTCAGATCCA TGGCATTGGA 1 2640115257 2307825239 98268789836 37.22 0.87
8 tih_rna_sample_00216_23KKJ7LT4_1 TTCAGATCCA TGGCATTGGA 2 2640115257 2422875474 101114772414 38.30 0.92
8 tih_rna_sample_00050_23KKJ7LT4_1 CTCACCAGTT TTGGTGTGTC 1 13917263659 13214437754 541348806797 38.90 0.95
8 tih_rna_sample_00050_23KKJ7LT4_1 CTCACCAGTT TTGGTGTGTC 2 13917263659 13145943836 540498282341 38.84 0.94
8 tih_rna_sample_00051_23KKJ7LT4_1 ACTAGTAGTC ACGTACACTC 1 14570883165 13965700378 569939748448 39.11 0.96
8 tih_rna_sample_00051_23KKJ7LT4_1 ACTAGTAGTC ACGTACACTC 2 14570883165 13593890044 561606062977 38.54 0.93
8 tih_rna_sample_00052_23KKJ7LT4_1 AATAGACTGC TCAAGGTCGC 1 17610823470 16948963697 690411957890 39.20 0.96
8 tih_rna_sample_00052_23KKJ7LT4_1 AATAGACTGC TCAAGGTCGC 2 17610823470 16780172805 687155684397 39.02 0.95
8 tih_rna_sample_00053_23KKJ7LT4_1 ATGATCAACG GTATAGCGTC 1 6448218987 5844563184 244516051497 37.92 0.91
8 tih_rna_sample_00053_23KKJ7LT4_1 ATGATCAACG GTATAGCGTC 2 6448218987 5716388008 241229114164 37.41 0.89
8 tih_rna_sample_00054_23KKJ7LT4_1 TAGGAAGCGG CCAATCCAGG 1 2751658051 2467321021 103895347573 37.76 0.90
8 tih_rna_sample_00054_23KKJ7LT4_1 TAGGAAGCGG CCAATCCAGG 2 2751658051 2565966403 106231852378 38.61 0.93
8 NTC_0001_0001_23KKJ7LT4_2 GCATCCTACT GACATCGCGA 1 192878340 126544198 6247510936 32.39 0.66
8 NTC_0001_0001_23KKJ7LT4_2 GCATCCTACT GACATCGCGA 2 192878340 173321151 7354608651 38.13 0.90
8 tih_rna_sample_00056_23KKJ7LT4_1 AGTCCAGCGT TGTCGTATTG 1 10370008352 9915362728 405229040296 39.08 0.96
8 tih_rna_sample_00056_23KKJ7LT4_1 AGTCCAGCGT TGTCGTATTG 2 10370008352 9866671949 404302297046 38.99 0.95
8 tih_rna_sample_00057_23KKJ7LT4_1 AGGCAGCCAT GAGTGTCTAG 1 1714776536 1566617910 65385779868 38.13 0.91
8 tih_rna_sample_00057_23KKJ7LT4_1 AGGCAGCCAT GAGTGTCTAG 2 1714776536 1591068106 65989800652 38.48 0.93
8 tih_rna_sample_00058_23KKJ7LT4_1 GCGACTCGTA CAGGCCATGT 1 11448536422 10927440157 446718977338 39.02 0.95
8 tih_rna_sample_00058_23KKJ7LT4_1 GCGACTCGTA CAGGCCATGT 2 11448536422 10905301178 446656310543 39.01 0.95
8 tih_rna_sample_00219_23KKJ7LT4_1 GTATCTGAGG ACGTATCTTG 1 12601581633 12007198779 491300689965 38.99 0.95
8 tih_rna_sample_00219_23KKJ7LT4_1 GTATCTGAGG ACGTATCTTG 2 12601581633 11941460903 490159276631 38.90 0.95
8 tih_rna_sample_00060_23KKJ7LT4_1 CATCACCTAA TGGTGGTATT 1 8533148467 7968904769 329030259017 38.56 0.93
8 tih_rna_sample_00060_23KKJ7LT4_1 CATCACCTAA TGGTGGTATT 2 8533148467 8026668856 330721601674 38.76 0.94
8 tih_rna_sample_00061_23KKJ7LT4_1 CGGCATATAC ATGAGCTGGA 1 14453599955 13848156276 565225426011 39.11 0.96
8 tih_rna_sample_00061_23KKJ7LT4_1 CGGCATATAC ATGAGCTGGA 2 14453599955 13748205933 563394439146 38.98 0.95
8 tih_rna_sample_00223_23KKJ7LT4_1 CACGAGTGTC TAGGCTAGAG 1 15685451009 15019371736 613048712368 39.08 0.96
8 tih_rna_sample_00223_23KKJ7LT4_1 CACGAGTGTC TAGGCTAGAG 2 15685451009 14951208132 612030477528 39.02 0.95
8 tih_rna_sample_00063_23KKJ7LT4_1 CGGAGACTAT ATGCTTCTAC 1 16409704842 15743152670 642573725336 39.16 0.96
8 tih_rna_sample_00063_23KKJ7LT4_1 CGGAGACTAT ATGCTTCTAC 2 16409704842 15561917823 638591786616 38.92 0.95
8 tih_rna_sample_00064_23KKJ7LT4_1 AAGGTGTTAG TGTGCTGGTG 1 20822214309 20065051441 817081830607 39.24 0.96
8 tih_rna_sample_00064_23KKJ7LT4_1 AAGGTGTTAG TGTGCTGGTG 2 20822214309 19934541700 814651042888 39.12 0.96
8 FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 GCGATGGAAG GCCGCAAGAT 1 20848130439 20235549758 821558126531 39.41 0.97
8 FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 GCGATGGAAG GCCGCAAGAT 2 20848130439 20003188110 816406183059 39.16 0.96
8 tih_rna_sample_00224_23KKJ7LT4_1 ACGGTCGCAT GTACTCTCTA 1 12306519932 11676249193 478933406170 38.92 0.95
8 tih_rna_sample_00224_23KKJ7LT4_1 ACGGTCGCAT GTACTCTCTA 2 12306519932 11590853115 477271673595 38.78 0.94
8 tih_rna_sample_00225_23KKJ7LT4_1 TTACACACGG AACTCCGAGA 1 17523800207 16739290757 684267018482 39.05 0.96
8 tih_rna_sample_00225_23KKJ7LT4_1 TTACACACGG AACTCCGAGA 2 17523800207 16745356948 684913141867 39.08 0.96
8 tih_rna_sample_00066_23KKJ7LT4_1 CGAGATTAGA CTAATCGCGG 1 12589316658 12060568703 492292658468 39.10 0.96
8 tih_rna_sample_00066_23KKJ7LT4_1 CGAGATTAGA CTAATCGCGG 2 12589316658 12028090233 491991991767 39.08 0.96
8 tih_rna_sample_00226_23KKJ7LT4_1 CAAGGATCGA GCAGACACAA 1 12030221793 11110539166 461151501403 38.33 0.92
8 tih_rna_sample_00226_23KKJ7LT4_1 CAAGGATCGA GCAGACACAA 2 12030221793 10952290351 457610836207 38.04 0.91
8 tih_rna_sample_00068_23KKJ7LT4_1 ACAACACACA CATCGGCACT 1 12841240830 12195945147 499781038104 38.92 0.95
8 tih_rna_sample_00068_23KKJ7LT4_1 ACAACACACA CATCGGCACT 2 12841240830 12227792443 500947753822 39.01 0.95
8 tih_rna_sample_00239_23KKJ7LT4_1 AAGAGCTCGC CCAATAGATC 1 10717945572 10132119518 415986295511 38.81 0.95
8 tih_rna_sample_00239_23KKJ7LT4_1 AAGAGCTCGC CCAATAGATC 2 10717945572 10136715354 416583113817 38.87 0.95
8 tih_rna_sample_00070_23KKJ7LT4_1 ACAGAGGCGT GACATATCGG 1 14249436479 13713701982 558762287061 39.21 0.96
8 tih_rna_sample_00070_23KKJ7LT4_1 ACAGAGGCGT GACATATCGG 2 14249436479 13633959582 557228033832 39.11 0.96
8 tih_rna_sample_00071_23KKJ7LT4_1 AACTGTACGG CTCCAATATG 1 15916748430 14993108073 616870399464 38.76 0.94
8 tih_rna_sample_00071_23KKJ7LT4_1 AACTGTACGG CTCCAATATG 2 15916748430 14891081013 614784743598 38.63 0.94
8 tih_rna_sample_00072_23KKJ7LT4_1 GCGAAGTAGG ACCATTGTGT 1 16973744806 16158762455 661532856635 38.97 0.95
8 tih_rna_sample_00072_23KKJ7LT4_1 GCGAAGTAGG ACCATTGTGT 2 16973744806 16187403841 662742140941 39.05 0.95
8 tih_rna_sample_00073_23KKJ7LT4_1 GTGAAGACAC TGGCTTGATC 1 10249159579 9657879905 396920638181 38.73 0.94
8 tih_rna_sample_00073_23KKJ7LT4_1 GTGAAGACAC TGGCTTGATC 2 10249159579 9716187243 398929787862 38.92 0.95
8 tih_rna_sample_00074_23KKJ7LT4_1 GACTTAGGTC CTATGGACTT 1 22069501489 20896978174 857136980242 38.84 0.95
8 tih_rna_sample_00074_23KKJ7LT4_1 GACTTAGGTC CTATGGACTT 2 22069501489 20948743742 859517175785 38.95 0.95
8 tih_rna_sample_00243_23KKJ7LT4_1 AGGACGGACA GAAGTCGTGG 1 12798150413 11937573898 492792881431 38.51 0.93
8 tih_rna_sample_00243_23KKJ7LT4_1 AGGACGGACA GAAGTCGTGG 2 12798150413 12044104039 496047105178 38.76 0.94
8 tih_rna_sample_00244_23KKJ7LT4_1 CCTATGTGTA TAGTGAGTCG 1 15862404889 15124825535 618540005978 38.99 0.95
8 tih_rna_sample_00244_23KKJ7LT4_1 CCTATGTGTA TAGTGAGTCG 2 15862404889 15140808717 619569531621 39.06 0.95
8 tih_rna_sample_00077_23KKJ7LT4_1 CAACGTTGAC TTGGACGGAA 1 12154488149 11487254797 471824377684 38.82 0.95
8 tih_rna_sample_00077_23KKJ7LT4_1 CAACGTTGAC TTGGACGGAA 2 12154488149 11356749383 469085824148 38.59 0.93
8 tih_rna_sample_00078_23KKJ7LT4_1 TGACATAGGT TACCAGAGAT 1 16291957609 15565635226 636050080921 39.04 0.96
8 tih_rna_sample_00078_23KKJ7LT4_1 TGACATAGGT TACCAGAGAT 2 16291957609 15552717600 636371379021 39.06 0.95
8 tih_rna_sample_00079_23KKJ7LT4_1 TTACACCAAC ATGAGTTAGG 1 8768818093 8183623831 337904280208 38.53 0.93
8 tih_rna_sample_00079_23KKJ7LT4_1 TTACACCAAC ATGAGTTAGG 2 8768818093 8076610996 335662340113 38.28 0.92
8 tih_rna_sample_00080_23KKJ7LT4_1 CCTGGAATTA CGTCATCGAA 1 9448959692 8743737328 362306054590 38.34 0.93
8 tih_rna_sample_00080_23KKJ7LT4_1 CCTGGAATTA CGTCATCGAA 2 9448959692 8818637594 364731396017 38.60 0.93
8 tih_rna_sample_00081_23KKJ7LT4_1 GCAACATCAA TGACCTAGTT 1 13429114936 12755728008 522688528269 38.92 0.95
8 tih_rna_sample_00081_23KKJ7LT4_1 GCAACATCAA TGACCTAGTT 2 13429114936 12757746626 523281510881 38.97 0.95
8 tih_rna_sample_00082_23KKJ7LT4_1 ACAGCCAGGT TCATGGTACT 1 14176599364 13475316459 551887495587 38.93 0.95
8 tih_rna_sample_00082_23KKJ7LT4_1 ACAGCCAGGT TCATGGTACT 2 14176599364 13471611019 552377958160 38.96 0.95
8 tih_rna_sample_00083_23KKJ7LT4_1 TAGTCCATCT GACAGGACAG 1 12411254287 11807788041 483374585208 38.95 0.95
8 tih_rna_sample_00083_23KKJ7LT4_1 TAGTCCATCT GACAGGACAG 2 12411254287 11804310922 483845206261 38.98 0.95
8 tih_rna_sample_00084_23KKJ7LT4_1 GCCTCTCAGA CGTGACGACT 1 6645728346 6050590064 252501082007 37.99 0.91
8 tih_rna_sample_00084_23KKJ7LT4_1 GCCTCTCAGA CGTGACGACT 2 6645728346 6186599415 256291385058 38.56 0.93
8 tih_rna_sample_00245_23KKJ7LT4_1 TAGGTTCAAG ACTTACCGGC 1 19447214500 18486406679 756965219420 38.92 0.95
8 tih_rna_sample_00245_23KKJ7LT4_1 TAGGTTCAAG ACTTACCGGC 2 19447214500 18092569939 747980376511 38.46 0.93
8 tih_rna_sample_00086_23KKJ7LT4_1 AAGACTCTCG GCTCTCCTTC 1 15029185379 14263072224 584652794163 38.90 0.95
8 tih_rna_sample_00086_23KKJ7LT4_1 AAGACTCTCG GCTCTCCTTC 2 15029185379 14253690285 584983984806 38.92 0.95
8 tih_rna_sample_00247_23KKJ7LT4_1 GAAGATCGAC AGTGACCACG 1 8404171666 7888717122 325055640924 38.68 0.94
8 tih_rna_sample_00247_23KKJ7LT4_1 GAAGATCGAC AGTGACCACG 2 8404171666 7843394476 324356489581 38.59 0.93
8 Undetermined 1 35432856378 29567058212 1285740650423 36.29 0.83
8 Undetermined 2 35432856378 28771939950 1262681206077 35.64 0.81
99 rows