Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
8,tih_rna_sample_00044_23KKJ7LT4_1,GCGCGGTTAA-AAGCTATAGC,79170242,77750762,1419480,0,0.0187,0.9821,0.0179,0.0000
8,FFPE_V4_0001_RNA_0002_23KKJ7LT4_1,TTCCTTGAGG-TAAGACAGCA,69786376,68605848,1180528,0,0.0165,0.9831,0.0169,0.0000
8,tih_rna_sample_00208_23KKJ7LT4_1,GAGTCGCTTC-AGCGAAGATT,95877270,94034189,1843081,0,0.0227,0.9808,0.0192,0.0000
8,tih_rna_sample_00045_23KKJ7LT4_1,GTACGCTCAA-ATTGATGGCG,81690346,80279238,1411108,0,0.0193,0.9827,0.0173,0.0000
8,tih_rna_sample_00046_23KKJ7LT4_1,TAGAAGATCG-CGACCAGTGT,78684821,76688163,1996658,0,0.0186,0.9746,0.0254,0.0000
8,tih_rna_sample_00047_23KKJ7LT4_1,AACCTAGTGC-TACAGGTCCT,102733700,101106488,1627212,0,0.0243,0.9842,0.0158,0.0000
8,tih_rna_sample_00048_23KKJ7LT4_1,CGTGTATGTC-GCATCTCTAT,85913575,84642817,1270758,0,0.0203,0.9852,0.0148,0.0000
8,tih_rna_sample_00216_23KKJ7LT4_1,TTCAGATCCA-TGGCATTGGA,17484207,17180646,303561,0,0.0041,0.9826,0.0174,0.0000
8,tih_rna_sample_00050_23KKJ7LT4_1,CTCACCAGTT-TTGGTGTGTC,92167309,90233551,1933758,0,0.0218,0.9790,0.0210,0.0000
8,tih_rna_sample_00051_23KKJ7LT4_1,ACTAGTAGTC-ACGTACACTC,96495915,94992070,1503845,0,0.0228,0.9844,0.0156,0.0000
8,tih_rna_sample_00052_23KKJ7LT4_1,AATAGACTGC-TCAAGGTCGC,116627970,114506244,2121726,0,0.0276,0.9818,0.0182,0.0000
8,tih_rna_sample_00053_23KKJ7LT4_1,ATGATCAACG-GTATAGCGTC,42703437,41938287,765150,0,0.0101,0.9821,0.0179,0.0000
8,tih_rna_sample_00054_23KKJ7LT4_1,TAGGAAGCGG-CCAATCCAGG,18222901,17901630,321271,0,0.0043,0.9824,0.0176,0.0000
8,NTC_0001_0001_23KKJ7LT4_2,GCATCCTACT-GACATCGCGA,1277340,1250991,26349,0,0.0003,0.9794,0.0206,0.0000
8,tih_rna_sample_00056_23KKJ7LT4_1,AGTCCAGCGT-TGTCGTATTG,68675552,67389362,1286190,0,0.0162,0.9813,0.0187,0.0000
8,tih_rna_sample_00057_23KKJ7LT4_1,AGGCAGCCAT-GAGTGTCTAG,11356136,11150914,205222,0,0.0027,0.9819,0.0181,0.0000
8,tih_rna_sample_00058_23KKJ7LT4_1,GCGACTCGTA-CAGGCCATGT,75818122,73581223,2236899,0,0.0179,0.9705,0.0295,0.0000
8,tih_rna_sample_00219_23KKJ7LT4_1,GTATCTGAGG-ACGTATCTTG,83454183,82227410,1226773,0,0.0197,0.9853,0.0147,0.0000
8,tih_rna_sample_00060_23KKJ7LT4_1,CATCACCTAA-TGGTGGTATT,56510917,54857235,1653682,0,0.0134,0.9707,0.0293,0.0000
8,tih_rna_sample_00061_23KKJ7LT4_1,CGGCATATAC-ATGAGCTGGA,95719205,94045397,1673808,0,0.0226,0.9825,0.0175,0.0000
8,tih_rna_sample_00223_23KKJ7LT4_1,CACGAGTGTC-TAGGCTAGAG,103877159,102347843,1529316,0,0.0246,0.9853,0.0147,0.0000
8,tih_rna_sample_00063_23KKJ7LT4_1,CGGAGACTAT-ATGCTTCTAC,108673542,106509649,2163893,0,0.0257,0.9801,0.0199,0.0000
8,tih_rna_sample_00064_23KKJ7LT4_1,AAGGTGTTAG-TGTGCTGGTG,137895459,135327153,2568306,0,0.0326,0.9814,0.0186,0.0000
8,FFPE_HD789_02_RNA_0006_23KKJ7LT4_1,GCGATGGAAG-GCCGCAAGAT,138067089,135659109,2407980,0,0.0327,0.9826,0.0174,0.0000
8,tih_rna_sample_00224_23KKJ7LT4_1,ACGGTCGCAT-GTACTCTCTA,81500132,80159614,1340518,0,0.0193,0.9836,0.0164,0.0000
8,tih_rna_sample_00225_23KKJ7LT4_1,TTACACACGG-AACTCCGAGA,116051657,114149394,1902263,0,0.0274,0.9836,0.0164,0.0000
8,tih_rna_sample_00066_23KKJ7LT4_1,CGAGATTAGA-CTAATCGCGG,83372958,81599503,1773455,0,0.0197,0.9787,0.0213,0.0000
8,tih_rna_sample_00226_23KKJ7LT4_1,CAAGGATCGA-GCAGACACAA,79670343,78336004,1334339,0,0.0188,0.9833,0.0167,0.0000
8,tih_rna_sample_00068_23KKJ7LT4_1,ACAACACACA-CATCGGCACT,85041330,83687629,1353701,0,0.0201,0.9841,0.0159,0.0000
8,tih_rna_sample_00239_23KKJ7LT4_1,AAGAGCTCGC-CCAATAGATC,70979772,69781052,1198720,0,0.0168,0.9831,0.0169,0.0000
8,tih_rna_sample_00070_23KKJ7LT4_1,ACAGAGGCGT-GACATATCGG,94367129,92765346,1601783,0,0.0223,0.9830,0.0170,0.0000
8,tih_rna_sample_00071_23KKJ7LT4_1,AACTGTACGG-CTCCAATATG,105408930,103506892,1902038,0,0.0249,0.9820,0.0180,0.0000
8,tih_rna_sample_00072_23KKJ7LT4_1,GCGAAGTAGG-ACCATTGTGT,112408906,110627587,1781319,0,0.0266,0.9842,0.0158,0.0000
8,tih_rna_sample_00073_23KKJ7LT4_1,GTGAAGACAC-TGGCTTGATC,67875229,66830957,1044272,0,0.0161,0.9846,0.0154,0.0000
8,tih_rna_sample_00074_23KKJ7LT4_1,GACTTAGGTC-CTATGGACTT,146155639,144075694,2079945,0,0.0346,0.9858,0.0142,0.0000
8,tih_rna_sample_00243_23KKJ7LT4_1,AGGACGGACA-GAAGTCGTGG,84755963,83028964,1726999,0,0.0200,0.9796,0.0204,0.0000
8,tih_rna_sample_00244_23KKJ7LT4_1,CCTATGTGTA-TAGTGAGTCG,105049039,103330335,1718704,0,0.0248,0.9836,0.0164,0.0000
8,tih_rna_sample_00077_23KKJ7LT4_1,CAACGTTGAC-TTGGACGGAA,80493299,79009294,1484005,0,0.0190,0.9816,0.0184,0.0000
8,tih_rna_sample_00078_23KKJ7LT4_1,TGACATAGGT-TACCAGAGAT,107893759,106325317,1568442,0,0.0255,0.9855,0.0145,0.0000
8,tih_rna_sample_00079_23KKJ7LT4_1,TTACACCAAC-ATGAGTTAGG,58071643,57098349,973294,0,0.0137,0.9832,0.0168,0.0000
8,tih_rna_sample_00080_23KKJ7LT4_1,CCTGGAATTA-CGTCATCGAA,62575892,61026307,1549585,0,0.0148,0.9752,0.0248,0.0000
8,tih_rna_sample_00081_23KKJ7LT4_1,GCAACATCAA-TGACCTAGTT,88934536,87284740,1649796,0,0.0210,0.9814,0.0186,0.0000
8,tih_rna_sample_00082_23KKJ7LT4_1,ACAGCCAGGT-TCATGGTACT,93884764,92319037,1565727,0,0.0222,0.9833,0.0167,0.0000
8,tih_rna_sample_00083_23KKJ7LT4_1,TAGTCCATCT-GACAGGACAG,82193737,80793736,1400001,0,0.0194,0.9830,0.0170,0.0000
8,tih_rna_sample_00084_23KKJ7LT4_1,GCCTCTCAGA-CGTGACGACT,44011446,43187464,823982,0,0.0104,0.9813,0.0187,0.0000
8,tih_rna_sample_00245_23KKJ7LT4_1,TAGGTTCAAG-ACTTACCGGC,128789500,126832453,1957047,0,0.0305,0.9848,0.0152,0.0000
8,tih_rna_sample_00086_23KKJ7LT4_1,AAGACTCTCG-GCTCTCCTTC,99531029,97617330,1913699,0,0.0235,0.9808,0.0192,0.0000
8,tih_rna_sample_00247_23KKJ7LT4_1,GAAGATCGAC-AGTGACCACG,55656766,54735822,920944,0,0.0132,0.9835,0.0165,0.0000
8,Undetermined,,234654678,234654678,0,0,0.0555,1.0000,0.0000,0.0000