Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
2,tih_rna_sample_00001_23KKJ7LT4_1,TTGGATTGTC-CGGCTGTTAG,77300956,74877802,2423154,0,0.0180,0.9687,0.0313,0.0000
2,tih_rna_sample_00002_23KKJ7LT4_1,AATTGGCACA-CAGTCGGAGT,75560892,73172440,2388452,0,0.0176,0.9684,0.0316,0.0000
2,NTC_0001_0001_23KKJ7LT4_1,AGGCAATCGC-ATGAGTCTGT,1526122,1479486,46636,0,0.0004,0.9694,0.0306,0.0000
2,tih_rna_sample_00004_23KKJ7LT4_1,TGCAACACTA-CGTTCTGGTA,118452020,114725360,3726660,0,0.0275,0.9685,0.0315,0.0000
2,tih_rna_sample_00005_23KKJ7LT4_1,GAATCGCCTG-CATTGACGGC,49329606,47650548,1679058,0,0.0115,0.9660,0.0340,0.0000
2,tih_rna_sample_00006_23KKJ7LT4_1,TCGCATGACA-TTGGCCAATG,86223313,83546921,2676392,0,0.0200,0.9690,0.0310,0.0000
2,tih_rna_sample_00007_23KKJ7LT4_1,TCAATACGTG-GCTGCTAATA,91858330,88880182,2978148,0,0.0213,0.9676,0.0324,0.0000
2,tih_rna_sample_00008_23KKJ7LT4_1,ATTCTCCACG-TCGATGATCG,18957027,18325110,631917,0,0.0044,0.9667,0.0333,0.0000
2,tih_rna_sample_00009_23KKJ7LT4_1,TGTTACAGAG-TGTGTACCAG,100475390,96649847,3825543,0,0.0233,0.9619,0.0381,0.0000
2,tih_rna_sample_00010_23KKJ7LT4_1,TTACGGACGC-ATTGGCCAGC,103906089,100692177,3213912,0,0.0241,0.9691,0.0309,0.0000
2,tih_rna_sample_00170_23KKJ7LT4_1,CCAATGTTGA-CTTGAATGTC,71636535,69501456,2135079,0,0.0166,0.9702,0.0298,0.0000
2,tih_rna_sample_00012_23KKJ7LT4_1,CGTACTTAGA-CCGATGTTCA,91146580,88254858,2891722,0,0.0212,0.9683,0.0317,0.0000
2,tih_rna_sample_00013_23KKJ7LT4_1,GCCGTGAACA-GCACCACCAT,58247095,56269839,1977256,0,0.0135,0.9661,0.0339,0.0000
2,tih_rna_sample_00176_23KKJ7LT4_1,AGGAGACCAC-TACCACGTAG,65212078,63191908,2020170,0,0.0151,0.9690,0.0310,0.0000
2,tih_rna_sample_00015_23KKJ7LT4_1,GAAGCAAGCG-TCACCGACTA,110945607,107266072,3679535,0,0.0258,0.9668,0.0332,0.0000
2,tih_rna_sample_00016_23KKJ7LT4_1,AACGCGACTG-GACCTACGAG,55918602,54127117,1791485,0,0.0130,0.9680,0.0320,0.0000
2,tih_rna_sample_00206_23KKJ7LT4_1,TTCGCGGACT-AGAGAGTGGT,109035568,105951165,3084403,0,0.0253,0.9717,0.0283,0.0000
2,FFPE_HD789_02_RNA_0005_23KKJ7LT4_1,TCGTGACGAC-GTGACTAACT,134744026,130615979,4128047,0,0.0313,0.9694,0.0306,0.0000
2,tih_rna_sample_00179_23KKJ7LT4_1,TCAATCTAGC-TCCGAATAAG,92357322,89484558,2872764,0,0.0215,0.9689,0.0311,0.0000
2,tih_rna_sample_00020_23KKJ7LT4_1,GCGGAGTCAA-CTCTATAGCT,93597263,90616834,2980429,0,0.0217,0.9682,0.0318,0.0000
2,tih_rna_sample_00021_23KKJ7LT4_1,GATGCTAGAA-TGGATGCCAG,89191784,86569111,2622673,0,0.0207,0.9706,0.0294,0.0000
2,tih_rna_sample_00022_23KKJ7LT4_1,ACGATGGTTA-AATTGCTAGG,100399825,97337439,3062386,0,0.0233,0.9695,0.0305,0.0000
2,tih_rna_sample_00023_23KKJ7LT4_1,AGAGCAGTAT-CAAGAGGAGG,113334524,110037634,3296890,0,0.0263,0.9709,0.0291,0.0000
2,tih_rna_sample_00180_23KKJ7LT4_1,TTGTGATCCT-ATGAAGGCAT,115827857,112337750,3490107,0,0.0269,0.9699,0.0301,0.0000
2,tih_rna_sample_00234_23KKJ7LT4_1,CCACCTGCTT-TGTTACCGTC,97239648,94024441,3215207,0,0.0226,0.9669,0.0331,0.0000
2,tih_rna_sample_00030_23KKJ7LT4_1,TGGTGGTTGT-TACCTGTCAA,129017712,125075677,3942035,0,0.0300,0.9694,0.0306,0.0000
2,tih_rna_sample_00198_23KKJ7LT4_1,ACGCAACACA-CATTCAGGAG,61642340,59624286,2018054,0,0.0143,0.9673,0.0327,0.0000
2,tih_rna_sample_00032_23KKJ7LT4_1,CCAGTGCACT-CCTCCGTATC,111124991,107124632,4000359,0,0.0258,0.9640,0.0360,0.0000
2,tih_rna_sample_00200_23KKJ7LT4_1,CATCAGGCGT-CGTGTTACCG,26971270,26077227,894043,0,0.0063,0.9669,0.0331,0.0000
2,FFPE_V4_0001_RNA_0003_23KKJ7LT4_1,ATCCTAGAAC-TGAAGTCTGC,85576717,83201519,2375198,0,0.0199,0.9722,0.0278,0.0000
2,tih_rna_sample_00034_23KKJ7LT4_1,GCCTAGAGTC-ATGGTTCTCT,69956886,67741751,2215135,0,0.0163,0.9683,0.0317,0.0000
2,tih_rna_sample_00035_23KKJ7LT4_1,CTTACTCTCT-CTGCTTAAGG,76144532,73556884,2587648,0,0.0177,0.9660,0.0340,0.0000
2,tih_rna_sample_00036_23KKJ7LT4_1,CCGACAACCT-TTCTACCTGT,57991165,56135645,1855520,0,0.0135,0.9680,0.0320,0.0000
2,tih_rna_sample_00037_23KKJ7LT4_1,GATCTGTATG-ATCGAAGAGC,162466955,157352443,5114512,0,0.0377,0.9685,0.0315,0.0000
2,tih_rna_sample_00202_23KKJ7LT4_1,ATAGGCAGTG-CAGAACTTAG,126301354,122738050,3563304,0,0.0293,0.9718,0.0282,0.0000
2,tih_rna_sample_00039_23KKJ7LT4_1,GAATAGAGTG-CACAGCGTCT,102617980,99456479,3161501,0,0.0238,0.9692,0.0308,0.0000
2,tih_rna_sample_00204_23KKJ7LT4_1,GTAACAGGAA-TGTCTTCAGA,4199016,4074256,124760,0,0.0010,0.9703,0.0297,0.0000
2,tih_rna_sample_00041_23KKJ7LT4_1,ATGGTTGTTG-AGTTATGAGG,91669206,89108724,2560482,0,0.0213,0.9721,0.0279,0.0000
2,tih_rna_sample_00042_23KKJ7LT4_1,ACAATAGCAC-GTATGCCTAT,70500345,68365967,2134378,0,0.0164,0.9697,0.0303,0.0000
2,tih_rna_sample_00043_23KKJ7LT4_1,CTACAAGTTC-GCACCATGAA,93493332,90690345,2802987,0,0.0217,0.9700,0.0300,0.0000
2,tih_rna_sample_00024_23KKJ7LT4_1,TAAGATCGGA-TTCATCCGTG,81476893,79053136,2423757,0,0.0189,0.9703,0.0297,0.0000
2,tih_rna_sample_00183_23KKJ7LT4_1,TTAGTTGCTG-ATGGCGGATT,76060669,73877650,2183019,0,0.0177,0.9713,0.0287,0.0000
2,tih_rna_sample_00025_23KKJ7LT4_1,AGTCAGATGC-CTCACACACT,83408100,80606584,2801516,0,0.0194,0.9664,0.0336,0.0000
2,tih_rna_sample_00184_23KKJ7LT4_1,AGTACAACTG-CATTGAGTTC,120659983,116969845,3690138,0,0.0280,0.9694,0.0306,0.0000
2,tih_rna_sample_00027_23KKJ7LT4_1,CTTAGTACGC-GCTACAACGA,79382288,76914299,2467989,0,0.0184,0.9689,0.0311,0.0000
2,tih_rna_sample_00185_23KKJ7LT4_1,GTACGCATCG-GAGTTGTTCA,72472526,69999684,2472842,0,0.0168,0.9659,0.0341,0.0000
2,tih_rna_sample_00186_23KKJ7LT4_1,ACTTCCGTTC-CAATTCCGTG,115302887,111825626,3477261,0,0.0268,0.9698,0.0302,0.0000
2,tih_rna_sample_00207_23KKJ7LT4_1,AACCTGATCT-ATTCCGTCCG,79019231,76341867,2677364,0,0.0184,0.9661,0.0339,0.0000
2,Undetermined,,204854255,204854255,0,0,0.0476,1.0000,0.0000,0.0000