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Filename
Quality_Metrics.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Quality_Metrics.csv
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10.2 KB
Workflow Run
dev_rna_exp06_07-73d51683
Published
Jun 07, 2026 11:48 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
5 tih_rna_sample_00044_23KKJ7LT4_1 GCGCGGTTAA AAGCTATAGC 1 12022723284 11437994691 468056309730 38.93 0.95
5 tih_rna_sample_00044_23KKJ7LT4_1 GCGCGGTTAA AAGCTATAGC 2 12022723284 11465929322 469297430648 39.03 0.95
5 FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 TTCCTTGAGG TAAGACAGCA 1 10802076430 10428665213 424217055824 39.27 0.97
5 FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 TTCCTTGAGG TAAGACAGCA 2 10802076430 10351344815 422661428627 39.13 0.96
5 tih_rna_sample_00208_23KKJ7LT4_1 GAGTCGCTTC AGCGAAGATT 1 14589715885 14020464378 571510648872 39.17 0.96
5 tih_rna_sample_00208_23KKJ7LT4_1 GAGTCGCTTC AGCGAAGATT 2 14589715885 13888590417 568872481647 38.99 0.95
5 tih_rna_sample_00045_23KKJ7LT4_1 GTACGCTCAA ATTGATGGCG 1 12416564353 11761876943 482267409491 38.84 0.95
5 tih_rna_sample_00045_23KKJ7LT4_1 GTACGCTCAA ATTGATGGCG 2 12416564353 11778370659 483342295818 38.93 0.95
5 tih_rna_sample_00046_23KKJ7LT4_1 TAGAAGATCG CGACCAGTGT 1 11916643670 11297201126 463157222399 38.87 0.95
5 tih_rna_sample_00046_23KKJ7LT4_1 TAGAAGATCG CGACCAGTGT 2 11916643670 11314612750 464056055071 38.94 0.95
5 tih_rna_sample_00047_23KKJ7LT4_1 AACCTAGTGC TACAGGTCCT 1 15586798330 14837789668 607409032918 38.97 0.95
5 tih_rna_sample_00047_23KKJ7LT4_1 AACCTAGTGC TACAGGTCCT 2 15586798330 14861040102 608393414340 39.03 0.95
5 tih_rna_sample_00048_23KKJ7LT4_1 CGTGTATGTC GCATCTCTAT 1 12711294911 11947605793 491513493424 38.67 0.94
5 tih_rna_sample_00048_23KKJ7LT4_1 CGTGTATGTC GCATCTCTAT 2 12711294911 12080805472 495397450474 38.97 0.95
5 tih_rna_sample_00216_23KKJ7LT4_1 TTCAGATCCA TGGCATTGGA 1 2617051215 2294737057 97523639668 37.26 0.88
5 tih_rna_sample_00216_23KKJ7LT4_1 TTCAGATCCA TGGCATTGGA 2 2617051215 2413458496 100475692843 38.39 0.92
5 tih_rna_sample_00050_23KKJ7LT4_1 CTCACCAGTT TTGGTGTGTC 1 14142914284 13474424541 551091948150 38.97 0.95
5 tih_rna_sample_00050_23KKJ7LT4_1 CTCACCAGTT TTGGTGTGTC 2 14142914284 13416007229 550436893805 38.92 0.95
5 tih_rna_sample_00051_23KKJ7LT4_1 ACTAGTAGTC ACGTACACTC 1 14785327023 14213135622 579191978796 39.17 0.96
5 tih_rna_sample_00051_23KKJ7LT4_1 ACTAGTAGTC ACGTACACTC 2 14785327023 13884945139 572005217209 38.69 0.94
5 tih_rna_sample_00052_23KKJ7LT4_1 AATAGACTGC TCAAGGTCGC 1 18180131522 17549010321 713901830187 39.27 0.97
5 tih_rna_sample_00052_23KKJ7LT4_1 AATAGACTGC TCAAGGTCGC 2 18180131522 17379864412 710553827041 39.08 0.96
5 tih_rna_sample_00053_23KKJ7LT4_1 ATGATCAACG GTATAGCGTC 1 6312167232 5739850957 239672256679 37.97 0.91
5 tih_rna_sample_00053_23KKJ7LT4_1 ATGATCAACG GTATAGCGTC 2 6312167232 5626407643 236867437096 37.53 0.89
5 tih_rna_sample_00054_23KKJ7LT4_1 TAGGAAGCGG CCAATCCAGG 1 2721958767 2448617980 102920611921 37.81 0.90
5 tih_rna_sample_00054_23KKJ7LT4_1 TAGGAAGCGG CCAATCCAGG 2 2721958767 2546083838 105245372258 38.67 0.94
5 NTC_0001_0001_23KKJ7LT4_2 GCATCCTACT GACATCGCGA 1 186646872 124033335 6080091630 32.58 0.66
5 NTC_0001_0001_23KKJ7LT4_2 GCATCCTACT GACATCGCGA 2 186646872 166734339 7099324659 38.04 0.89
5 tih_rna_sample_00056_23KKJ7LT4_1 AGTCCAGCGT TGTCGTATTG 1 10461262031 10043280991 409723054984 39.17 0.96
5 tih_rna_sample_00056_23KKJ7LT4_1 AGTCCAGCGT TGTCGTATTG 2 10461262031 9987464814 408548404797 39.05 0.95
5 tih_rna_sample_00057_23KKJ7LT4_1 AGGCAGCCAT GAGTGTCTAG 1 1698190847 1564716186 65059303110 38.31 0.92
5 tih_rna_sample_00057_23KKJ7LT4_1 AGGCAGCCAT GAGTGTCTAG 2 1698190847 1580854298 65458156745 38.55 0.93
5 tih_rna_sample_00058_23KKJ7LT4_1 GCGACTCGTA CAGGCCATGT 1 11554708146 11061723367 451534332439 39.08 0.96
5 tih_rna_sample_00058_23KKJ7LT4_1 GCGACTCGTA CAGGCCATGT 2 11554708146 11040428326 451494919897 39.07 0.96
5 tih_rna_sample_00219_23KKJ7LT4_1 GTATCTGAGG ACGTATCTTG 1 12715425818 12160858372 496707736282 39.06 0.96
5 tih_rna_sample_00219_23KKJ7LT4_1 GTATCTGAGG ACGTATCTTG 2 12715425818 12092937944 495491153921 38.97 0.95
5 tih_rna_sample_00060_23KKJ7LT4_1 CATCACCTAA TGGTGGTATT 1 8677248069 8127478043 335009698994 38.61 0.94
5 tih_rna_sample_00060_23KKJ7LT4_1 CATCACCTAA TGGTGGTATT 2 8677248069 8195441192 336983421062 38.84 0.94
5 tih_rna_sample_00061_23KKJ7LT4_1 CGGCATATAC ATGAGCTGGA 1 14817399423 14249183863 580643252677 39.19 0.96
5 tih_rna_sample_00061_23KKJ7LT4_1 CGGCATATAC ATGAGCTGGA 2 14817399423 14143751652 578589996363 39.05 0.95
5 tih_rna_sample_00223_23KKJ7LT4_1 CACGAGTGTC TAGGCTAGAG 1 15695615423 15072423164 614342892947 39.14 0.96
5 tih_rna_sample_00223_23KKJ7LT4_1 CACGAGTGTC TAGGCTAGAG 2 15695615423 15008578765 613411227172 39.08 0.96
5 tih_rna_sample_00063_23KKJ7LT4_1 CGGAGACTAT ATGCTTCTAC 1 16732644616 16122277906 656753080030 39.25 0.96
5 tih_rna_sample_00063_23KKJ7LT4_1 CGGAGACTAT ATGCTTCTAC 2 16732644616 15922727461 652285845436 38.98 0.95
5 tih_rna_sample_00064_23KKJ7LT4_1 AAGGTGTTAG TGTGCTGGTG 1 21254832027 20563357801 835875894112 39.33 0.97
5 tih_rna_sample_00064_23KKJ7LT4_1 AAGGTGTTAG TGTGCTGGTG 2 21254832027 20417559131 832981367294 39.19 0.96
5 FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 GCGATGGAAG GCCGCAAGAT 1 21433150041 20865001841 845960838113 39.47 0.97
5 FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 GCGATGGAAG GCCGCAAGAT 2 21433150041 20618055827 840425671811 39.21 0.96
5 tih_rna_sample_00224_23KKJ7LT4_1 ACGGTCGCAT GTACTCTCTA 1 12115827468 11554500737 472856653064 39.03 0.95
5 tih_rna_sample_00224_23KKJ7LT4_1 ACGGTCGCAT GTACTCTCTA 2 12115827468 11454077386 470759947030 38.85 0.95
5 tih_rna_sample_00225_23KKJ7LT4_1 TTACACACGG AACTCCGAGA 1 17683402526 16935538694 691338541427 39.10 0.96
5 tih_rna_sample_00225_23KKJ7LT4_1 TTACACACGG AACTCCGAGA 2 17683402526 16955414880 692333515656 39.15 0.96
5 tih_rna_sample_00066_23KKJ7LT4_1 CGAGATTAGA CTAATCGCGG 1 12577747944 12078159734 492380334752 39.15 0.96
5 tih_rna_sample_00066_23KKJ7LT4_1 CGAGATTAGA CTAATCGCGG 2 12577747944 12053219067 492280813023 39.14 0.96
5 tih_rna_sample_00226_23KKJ7LT4_1 CAAGGATCGA GCAGACACAA 1 12013787104 11141723022 461425062108 38.41 0.93
5 tih_rna_sample_00226_23KKJ7LT4_1 CAAGGATCGA GCAGACACAA 2 12013787104 10979917161 457874616189 38.11 0.91
5 tih_rna_sample_00068_23KKJ7LT4_1 ACAACACACA CATCGGCACT 1 13002817323 12384093704 506718097130 38.97 0.95
5 tih_rna_sample_00068_23KKJ7LT4_1 ACAACACACA CATCGGCACT 2 13002817323 12425329685 508146543977 39.08 0.96
5 tih_rna_sample_00239_23KKJ7LT4_1 AAGAGCTCGC CCAATAGATC 1 10707884291 10164112339 416579572000 38.90 0.95
5 tih_rna_sample_00239_23KKJ7LT4_1 AAGAGCTCGC CCAATAGATC 2 10707884291 10161974990 416904916292 38.93 0.95
5 tih_rna_sample_00070_23KKJ7LT4_1 ACAGAGGCGT GACATATCGG 1 14336444944 13846104321 563276342589 39.29 0.97
5 tih_rna_sample_00070_23KKJ7LT4_1 ACAGAGGCGT GACATATCGG 2 14336444944 13757972903 561461215343 39.16 0.96
5 tih_rna_sample_00071_23KKJ7LT4_1 AACTGTACGG CTCCAATATG 1 15921861743 15046698745 618023710894 38.82 0.95
5 tih_rna_sample_00071_23KKJ7LT4_1 AACTGTACGG CTCCAATATG 2 15921861743 14956724083 616257947596 38.71 0.94
5 tih_rna_sample_00072_23KKJ7LT4_1 GCGAAGTAGG ACCATTGTGT 1 17166233868 16383669883 669812784010 39.02 0.95
5 tih_rna_sample_00072_23KKJ7LT4_1 GCGAAGTAGG ACCATTGTGT 2 17166233868 16428788796 671444708205 39.11 0.96
5 tih_rna_sample_00073_23KKJ7LT4_1 GTGAAGACAC TGGCTTGATC 1 10251221333 9697209984 397876810110 38.81 0.95
5 tih_rna_sample_00073_23KKJ7LT4_1 GTGAAGACAC TGGCTTGATC 2 10251221333 9753894521 399737034473 38.99 0.95
5 tih_rna_sample_00074_23KKJ7LT4_1 GACTTAGGTC CTATGGACTT 1 22083347283 20987549159 859388002526 38.92 0.95
5 tih_rna_sample_00074_23KKJ7LT4_1 GACTTAGGTC CTATGGACTT 2 22083347283 21040964455 861677301472 39.02 0.95
5 tih_rna_sample_00243_23KKJ7LT4_1 AGGACGGACA GAAGTCGTGG 1 12879148021 12052022399 496684000364 38.56 0.94
5 tih_rna_sample_00243_23KKJ7LT4_1 AGGACGGACA GAAGTCGTGG 2 12879148021 12172845919 500265087958 38.84 0.95
5 tih_rna_sample_00244_23KKJ7LT4_1 CCTATGTGTA TAGTGAGTCG 1 16040525093 15341400938 626392438163 39.05 0.96
5 tih_rna_sample_00244_23KKJ7LT4_1 CCTATGTGTA TAGTGAGTCG 2 16040525093 15364303279 627614141071 39.13 0.96
5 tih_rna_sample_00077_23KKJ7LT4_1 CAACGTTGAC TTGGACGGAA 1 12300141692 11679303260 478749374828 38.92 0.95
5 tih_rna_sample_00077_23KKJ7LT4_1 CAACGTTGAC TTGGACGGAA 2 12300141692 11542630114 475751147776 38.68 0.94
5 tih_rna_sample_00078_23KKJ7LT4_1 TGACATAGGT TACCAGAGAT 1 16504083768 15827654275 645665147116 39.12 0.96
5 tih_rna_sample_00078_23KKJ7LT4_1 TGACATAGGT TACCAGAGAT 2 16504083768 15810176555 645787650191 39.13 0.96
5 tih_rna_sample_00079_23KKJ7LT4_1 TTACACCAAC ATGAGTTAGG 1 8957364394 8400581865 346085929293 38.64 0.94
5 tih_rna_sample_00079_23KKJ7LT4_1 TTACACCAAC ATGAGTTAGG 2 8957364394 8288213869 343677298840 38.37 0.93
5 tih_rna_sample_00080_23KKJ7LT4_1 CCTGGAATTA CGTCATCGAA 1 9464838701 8796185587 363708494251 38.43 0.93
5 tih_rna_sample_00080_23KKJ7LT4_1 CCTGGAATTA CGTCATCGAA 2 9464838701 8875373209 366205456753 38.69 0.94
5 tih_rna_sample_00081_23KKJ7LT4_1 GCAACATCAA TGACCTAGTT 1 13693153385 13040009537 533584217999 38.97 0.95
5 tih_rna_sample_00081_23KKJ7LT4_1 GCAACATCAA TGACCTAGTT 2 13693153385 13057155077 534570631580 39.04 0.95
5 tih_rna_sample_00082_23KKJ7LT4_1 ACAGCCAGGT TCATGGTACT 1 14196345030 13546529933 553843195292 39.01 0.95
5 tih_rna_sample_00082_23KKJ7LT4_1 ACAGCCAGGT TCATGGTACT 2 14196345030 13539047548 554140910473 39.03 0.95
5 tih_rna_sample_00083_23KKJ7LT4_1 TAGTCCATCT GACAGGACAG 1 12637007441 12071858278 493269376783 39.03 0.96
5 tih_rna_sample_00083_23KKJ7LT4_1 TAGTCCATCT GACAGGACAG 2 12637007441 12062388379 493533546169 39.05 0.95
5 tih_rna_sample_00084_23KKJ7LT4_1 GCCTCTCAGA CGTGACGACT 1 6598348774 6025929698 251003490791 38.04 0.91
5 tih_rna_sample_00084_23KKJ7LT4_1 GCCTCTCAGA CGTGACGACT 2 6598348774 6171247697 255047445584 38.65 0.94
5 tih_rna_sample_00245_23KKJ7LT4_1 TAGGTTCAAG ACTTACCGGC 1 19441647432 18543611505 758096498823 38.99 0.95
5 tih_rna_sample_00245_23KKJ7LT4_1 TAGGTTCAAG ACTTACCGGC 2 19441647432 18174747474 749754045360 38.56 0.93
5 tih_rna_sample_00086_23KKJ7LT4_1 AAGACTCTCG GCTCTCCTTC 1 15039036468 14315477656 585853788316 38.96 0.95
5 tih_rna_sample_00086_23KKJ7LT4_1 AAGACTCTCG GCTCTCCTTC 2 15039036468 14313324203 586404289295 38.99 0.95
5 tih_rna_sample_00247_23KKJ7LT4_1 GAAGATCGAC AGTGACCACG 1 8279987756 7812660546 321210854334 38.79 0.94
5 tih_rna_sample_00247_23KKJ7LT4_1 GAAGATCGAC AGTGACCACG 2 8279987756 7760460403 320250195253 38.68 0.94
5 Undetermined 1 33893972645 28476283781 1235272797491 36.45 0.84
5 Undetermined 2 33893972645 28076380374 1220886493707 36.02 0.83
99 rows