File Info
- Filename
- Adapter_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Adapter_Metrics.csv
- Size
- 7.5 KB
- Workflow Run
- dev_rna_exp06_07-73d51683
- Published
- Jun 07, 2026 11:48 PM
Content
View in new tab| Lane | Sample_ID | index | index2 | ReadNumber | AdapterBases | SampleBases | % Adapter Bases |
| 5 | tih_rna_sample_00044_23KKJ7LT4_1 | GCGCGGTTAA | AAGCTATAGC | 1 | 0 | 12022723284 | 0.000 |
| 5 | tih_rna_sample_00044_23KKJ7LT4_1 | GCGCGGTTAA | AAGCTATAGC | 2 | 0 | 12022723284 | 0.000 |
| 5 | FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 | TTCCTTGAGG | TAAGACAGCA | 1 | 0 | 10802076430 | 0.000 |
| 5 | FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 | TTCCTTGAGG | TAAGACAGCA | 2 | 0 | 10802076430 | 0.000 |
| 5 | tih_rna_sample_00208_23KKJ7LT4_1 | GAGTCGCTTC | AGCGAAGATT | 1 | 0 | 14589715885 | 0.000 |
| 5 | tih_rna_sample_00208_23KKJ7LT4_1 | GAGTCGCTTC | AGCGAAGATT | 2 | 0 | 14589715885 | 0.000 |
| 5 | tih_rna_sample_00045_23KKJ7LT4_1 | GTACGCTCAA | ATTGATGGCG | 1 | 0 | 12416564353 | 0.000 |
| 5 | tih_rna_sample_00045_23KKJ7LT4_1 | GTACGCTCAA | ATTGATGGCG | 2 | 0 | 12416564353 | 0.000 |
| 5 | tih_rna_sample_00046_23KKJ7LT4_1 | TAGAAGATCG | CGACCAGTGT | 1 | 0 | 11916643670 | 0.000 |
| 5 | tih_rna_sample_00046_23KKJ7LT4_1 | TAGAAGATCG | CGACCAGTGT | 2 | 0 | 11916643670 | 0.000 |
| 5 | tih_rna_sample_00047_23KKJ7LT4_1 | AACCTAGTGC | TACAGGTCCT | 1 | 0 | 15586798330 | 0.000 |
| 5 | tih_rna_sample_00047_23KKJ7LT4_1 | AACCTAGTGC | TACAGGTCCT | 2 | 0 | 15586798330 | 0.000 |
| 5 | tih_rna_sample_00048_23KKJ7LT4_1 | CGTGTATGTC | GCATCTCTAT | 1 | 0 | 12711294911 | 0.000 |
| 5 | tih_rna_sample_00048_23KKJ7LT4_1 | CGTGTATGTC | GCATCTCTAT | 2 | 0 | 12711294911 | 0.000 |
| 5 | tih_rna_sample_00216_23KKJ7LT4_1 | TTCAGATCCA | TGGCATTGGA | 1 | 0 | 2617051215 | 0.000 |
| 5 | tih_rna_sample_00216_23KKJ7LT4_1 | TTCAGATCCA | TGGCATTGGA | 2 | 0 | 2617051215 | 0.000 |
| 5 | tih_rna_sample_00050_23KKJ7LT4_1 | CTCACCAGTT | TTGGTGTGTC | 1 | 0 | 14142914284 | 0.000 |
| 5 | tih_rna_sample_00050_23KKJ7LT4_1 | CTCACCAGTT | TTGGTGTGTC | 2 | 0 | 14142914284 | 0.000 |
| 5 | tih_rna_sample_00051_23KKJ7LT4_1 | ACTAGTAGTC | ACGTACACTC | 1 | 0 | 14785327023 | 0.000 |
| 5 | tih_rna_sample_00051_23KKJ7LT4_1 | ACTAGTAGTC | ACGTACACTC | 2 | 0 | 14785327023 | 0.000 |
| 5 | tih_rna_sample_00052_23KKJ7LT4_1 | AATAGACTGC | TCAAGGTCGC | 1 | 0 | 18180131522 | 0.000 |
| 5 | tih_rna_sample_00052_23KKJ7LT4_1 | AATAGACTGC | TCAAGGTCGC | 2 | 0 | 18180131522 | 0.000 |
| 5 | tih_rna_sample_00053_23KKJ7LT4_1 | ATGATCAACG | GTATAGCGTC | 1 | 0 | 6312167232 | 0.000 |
| 5 | tih_rna_sample_00053_23KKJ7LT4_1 | ATGATCAACG | GTATAGCGTC | 2 | 0 | 6312167232 | 0.000 |
| 5 | tih_rna_sample_00054_23KKJ7LT4_1 | TAGGAAGCGG | CCAATCCAGG | 1 | 0 | 2721958767 | 0.000 |
| 5 | tih_rna_sample_00054_23KKJ7LT4_1 | TAGGAAGCGG | CCAATCCAGG | 2 | 0 | 2721958767 | 0.000 |
| 5 | NTC_0001_0001_23KKJ7LT4_2 | GCATCCTACT | GACATCGCGA | 1 | 0 | 186646872 | 0.000 |
| 5 | NTC_0001_0001_23KKJ7LT4_2 | GCATCCTACT | GACATCGCGA | 2 | 0 | 186646872 | 0.000 |
| 5 | tih_rna_sample_00056_23KKJ7LT4_1 | AGTCCAGCGT | TGTCGTATTG | 1 | 0 | 10461262031 | 0.000 |
| 5 | tih_rna_sample_00056_23KKJ7LT4_1 | AGTCCAGCGT | TGTCGTATTG | 2 | 0 | 10461262031 | 0.000 |
| 5 | tih_rna_sample_00057_23KKJ7LT4_1 | AGGCAGCCAT | GAGTGTCTAG | 1 | 0 | 1698190847 | 0.000 |
| 5 | tih_rna_sample_00057_23KKJ7LT4_1 | AGGCAGCCAT | GAGTGTCTAG | 2 | 0 | 1698190847 | 0.000 |
| 5 | tih_rna_sample_00058_23KKJ7LT4_1 | GCGACTCGTA | CAGGCCATGT | 1 | 0 | 11554708146 | 0.000 |
| 5 | tih_rna_sample_00058_23KKJ7LT4_1 | GCGACTCGTA | CAGGCCATGT | 2 | 0 | 11554708146 | 0.000 |
| 5 | tih_rna_sample_00219_23KKJ7LT4_1 | GTATCTGAGG | ACGTATCTTG | 1 | 0 | 12715425818 | 0.000 |
| 5 | tih_rna_sample_00219_23KKJ7LT4_1 | GTATCTGAGG | ACGTATCTTG | 2 | 0 | 12715425818 | 0.000 |
| 5 | tih_rna_sample_00060_23KKJ7LT4_1 | CATCACCTAA | TGGTGGTATT | 1 | 0 | 8677248069 | 0.000 |
| 5 | tih_rna_sample_00060_23KKJ7LT4_1 | CATCACCTAA | TGGTGGTATT | 2 | 0 | 8677248069 | 0.000 |
| 5 | tih_rna_sample_00061_23KKJ7LT4_1 | CGGCATATAC | ATGAGCTGGA | 1 | 0 | 14817399423 | 0.000 |
| 5 | tih_rna_sample_00061_23KKJ7LT4_1 | CGGCATATAC | ATGAGCTGGA | 2 | 0 | 14817399423 | 0.000 |
| 5 | tih_rna_sample_00223_23KKJ7LT4_1 | CACGAGTGTC | TAGGCTAGAG | 1 | 0 | 15695615423 | 0.000 |
| 5 | tih_rna_sample_00223_23KKJ7LT4_1 | CACGAGTGTC | TAGGCTAGAG | 2 | 0 | 15695615423 | 0.000 |
| 5 | tih_rna_sample_00063_23KKJ7LT4_1 | CGGAGACTAT | ATGCTTCTAC | 1 | 0 | 16732644616 | 0.000 |
| 5 | tih_rna_sample_00063_23KKJ7LT4_1 | CGGAGACTAT | ATGCTTCTAC | 2 | 0 | 16732644616 | 0.000 |
| 5 | tih_rna_sample_00064_23KKJ7LT4_1 | AAGGTGTTAG | TGTGCTGGTG | 1 | 0 | 21254832027 | 0.000 |
| 5 | tih_rna_sample_00064_23KKJ7LT4_1 | AAGGTGTTAG | TGTGCTGGTG | 2 | 0 | 21254832027 | 0.000 |
| 5 | FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 | GCGATGGAAG | GCCGCAAGAT | 1 | 0 | 21433150041 | 0.000 |
| 5 | FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 | GCGATGGAAG | GCCGCAAGAT | 2 | 0 | 21433150041 | 0.000 |
| 5 | tih_rna_sample_00224_23KKJ7LT4_1 | ACGGTCGCAT | GTACTCTCTA | 1 | 0 | 12115827468 | 0.000 |
| 5 | tih_rna_sample_00224_23KKJ7LT4_1 | ACGGTCGCAT | GTACTCTCTA | 2 | 0 | 12115827468 | 0.000 |
| 5 | tih_rna_sample_00225_23KKJ7LT4_1 | TTACACACGG | AACTCCGAGA | 1 | 0 | 17683402526 | 0.000 |
| 5 | tih_rna_sample_00225_23KKJ7LT4_1 | TTACACACGG | AACTCCGAGA | 2 | 0 | 17683402526 | 0.000 |
| 5 | tih_rna_sample_00066_23KKJ7LT4_1 | CGAGATTAGA | CTAATCGCGG | 1 | 0 | 12577747944 | 0.000 |
| 5 | tih_rna_sample_00066_23KKJ7LT4_1 | CGAGATTAGA | CTAATCGCGG | 2 | 0 | 12577747944 | 0.000 |
| 5 | tih_rna_sample_00226_23KKJ7LT4_1 | CAAGGATCGA | GCAGACACAA | 1 | 0 | 12013787104 | 0.000 |
| 5 | tih_rna_sample_00226_23KKJ7LT4_1 | CAAGGATCGA | GCAGACACAA | 2 | 0 | 12013787104 | 0.000 |
| 5 | tih_rna_sample_00068_23KKJ7LT4_1 | ACAACACACA | CATCGGCACT | 1 | 0 | 13002817323 | 0.000 |
| 5 | tih_rna_sample_00068_23KKJ7LT4_1 | ACAACACACA | CATCGGCACT | 2 | 0 | 13002817323 | 0.000 |
| 5 | tih_rna_sample_00239_23KKJ7LT4_1 | AAGAGCTCGC | CCAATAGATC | 1 | 0 | 10707884291 | 0.000 |
| 5 | tih_rna_sample_00239_23KKJ7LT4_1 | AAGAGCTCGC | CCAATAGATC | 2 | 0 | 10707884291 | 0.000 |
| 5 | tih_rna_sample_00070_23KKJ7LT4_1 | ACAGAGGCGT | GACATATCGG | 1 | 0 | 14336444944 | 0.000 |
| 5 | tih_rna_sample_00070_23KKJ7LT4_1 | ACAGAGGCGT | GACATATCGG | 2 | 0 | 14336444944 | 0.000 |
| 5 | tih_rna_sample_00071_23KKJ7LT4_1 | AACTGTACGG | CTCCAATATG | 1 | 0 | 15921861743 | 0.000 |
| 5 | tih_rna_sample_00071_23KKJ7LT4_1 | AACTGTACGG | CTCCAATATG | 2 | 0 | 15921861743 | 0.000 |
| 5 | tih_rna_sample_00072_23KKJ7LT4_1 | GCGAAGTAGG | ACCATTGTGT | 1 | 0 | 17166233868 | 0.000 |
| 5 | tih_rna_sample_00072_23KKJ7LT4_1 | GCGAAGTAGG | ACCATTGTGT | 2 | 0 | 17166233868 | 0.000 |
| 5 | tih_rna_sample_00073_23KKJ7LT4_1 | GTGAAGACAC | TGGCTTGATC | 1 | 0 | 10251221333 | 0.000 |
| 5 | tih_rna_sample_00073_23KKJ7LT4_1 | GTGAAGACAC | TGGCTTGATC | 2 | 0 | 10251221333 | 0.000 |
| 5 | tih_rna_sample_00074_23KKJ7LT4_1 | GACTTAGGTC | CTATGGACTT | 1 | 0 | 22083347283 | 0.000 |
| 5 | tih_rna_sample_00074_23KKJ7LT4_1 | GACTTAGGTC | CTATGGACTT | 2 | 0 | 22083347283 | 0.000 |
| 5 | tih_rna_sample_00243_23KKJ7LT4_1 | AGGACGGACA | GAAGTCGTGG | 1 | 0 | 12879148021 | 0.000 |
| 5 | tih_rna_sample_00243_23KKJ7LT4_1 | AGGACGGACA | GAAGTCGTGG | 2 | 0 | 12879148021 | 0.000 |
| 5 | tih_rna_sample_00244_23KKJ7LT4_1 | CCTATGTGTA | TAGTGAGTCG | 1 | 0 | 16040525093 | 0.000 |
| 5 | tih_rna_sample_00244_23KKJ7LT4_1 | CCTATGTGTA | TAGTGAGTCG | 2 | 0 | 16040525093 | 0.000 |
| 5 | tih_rna_sample_00077_23KKJ7LT4_1 | CAACGTTGAC | TTGGACGGAA | 1 | 0 | 12300141692 | 0.000 |
| 5 | tih_rna_sample_00077_23KKJ7LT4_1 | CAACGTTGAC | TTGGACGGAA | 2 | 0 | 12300141692 | 0.000 |
| 5 | tih_rna_sample_00078_23KKJ7LT4_1 | TGACATAGGT | TACCAGAGAT | 1 | 0 | 16504083768 | 0.000 |
| 5 | tih_rna_sample_00078_23KKJ7LT4_1 | TGACATAGGT | TACCAGAGAT | 2 | 0 | 16504083768 | 0.000 |
| 5 | tih_rna_sample_00079_23KKJ7LT4_1 | TTACACCAAC | ATGAGTTAGG | 1 | 0 | 8957364394 | 0.000 |
| 5 | tih_rna_sample_00079_23KKJ7LT4_1 | TTACACCAAC | ATGAGTTAGG | 2 | 0 | 8957364394 | 0.000 |
| 5 | tih_rna_sample_00080_23KKJ7LT4_1 | CCTGGAATTA | CGTCATCGAA | 1 | 0 | 9464838701 | 0.000 |
| 5 | tih_rna_sample_00080_23KKJ7LT4_1 | CCTGGAATTA | CGTCATCGAA | 2 | 0 | 9464838701 | 0.000 |
| 5 | tih_rna_sample_00081_23KKJ7LT4_1 | GCAACATCAA | TGACCTAGTT | 1 | 0 | 13693153385 | 0.000 |
| 5 | tih_rna_sample_00081_23KKJ7LT4_1 | GCAACATCAA | TGACCTAGTT | 2 | 0 | 13693153385 | 0.000 |
| 5 | tih_rna_sample_00082_23KKJ7LT4_1 | ACAGCCAGGT | TCATGGTACT | 1 | 0 | 14196345030 | 0.000 |
| 5 | tih_rna_sample_00082_23KKJ7LT4_1 | ACAGCCAGGT | TCATGGTACT | 2 | 0 | 14196345030 | 0.000 |
| 5 | tih_rna_sample_00083_23KKJ7LT4_1 | TAGTCCATCT | GACAGGACAG | 1 | 0 | 12637007441 | 0.000 |
| 5 | tih_rna_sample_00083_23KKJ7LT4_1 | TAGTCCATCT | GACAGGACAG | 2 | 0 | 12637007441 | 0.000 |
| 5 | tih_rna_sample_00084_23KKJ7LT4_1 | GCCTCTCAGA | CGTGACGACT | 1 | 0 | 6598348774 | 0.000 |
| 5 | tih_rna_sample_00084_23KKJ7LT4_1 | GCCTCTCAGA | CGTGACGACT | 2 | 0 | 6598348774 | 0.000 |
| 5 | tih_rna_sample_00245_23KKJ7LT4_1 | TAGGTTCAAG | ACTTACCGGC | 1 | 0 | 19441647432 | 0.000 |
| 5 | tih_rna_sample_00245_23KKJ7LT4_1 | TAGGTTCAAG | ACTTACCGGC | 2 | 0 | 19441647432 | 0.000 |
| 5 | tih_rna_sample_00086_23KKJ7LT4_1 | AAGACTCTCG | GCTCTCCTTC | 1 | 0 | 15039036468 | 0.000 |
| 5 | tih_rna_sample_00086_23KKJ7LT4_1 | AAGACTCTCG | GCTCTCCTTC | 2 | 0 | 15039036468 | 0.000 |
| 5 | tih_rna_sample_00247_23KKJ7LT4_1 | GAAGATCGAC | AGTGACCACG | 1 | 0 | 8279987756 | 0.000 |
| 5 | tih_rna_sample_00247_23KKJ7LT4_1 | GAAGATCGAC | AGTGACCACG | 2 | 0 | 8279987756 | 0.000 |
| 5 | Undetermined | 1 | 0 | 33893972645 | 0.000 | ||
| 5 | Undetermined | 2 | 0 | 33893972645 | 0.000 |
99 rows