Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
4,tih_rna_sample_00001_23KKJ7LT4_1,TTGGATTGTC-CGGCTGTTAG,77364956,76249884,1115072,0,0.0181,0.9856,0.0144,0.0000
4,tih_rna_sample_00002_23KKJ7LT4_1,AATTGGCACA-CAGTCGGAGT,75003133,73948139,1054994,0,0.0176,0.9859,0.0141,0.0000
4,NTC_0001_0001_23KKJ7LT4_1,AGGCAATCGC-ATGAGTCTGT,1493320,1473515,19805,0,0.0003,0.9867,0.0133,0.0000
4,tih_rna_sample_00004_23KKJ7LT4_1,TGCAACACTA-CGTTCTGGTA,117040797,115479248,1561549,0,0.0274,0.9867,0.0133,0.0000
4,tih_rna_sample_00005_23KKJ7LT4_1,GAATCGCCTG-CATTGACGGC,48896696,48103107,793589,0,0.0115,0.9838,0.0162,0.0000
4,tih_rna_sample_00006_23KKJ7LT4_1,TCGCATGACA-TTGGCCAATG,84920054,83697018,1223036,0,0.0199,0.9856,0.0144,0.0000
4,tih_rna_sample_00007_23KKJ7LT4_1,TCAATACGTG-GCTGCTAATA,90533710,89292825,1240885,0,0.0212,0.9863,0.0137,0.0000
4,tih_rna_sample_00008_23KKJ7LT4_1,ATTCTCCACG-TCGATGATCG,18882847,18593649,289198,0,0.0044,0.9847,0.0153,0.0000
4,tih_rna_sample_00009_23KKJ7LT4_1,TGTTACAGAG-TGTGTACCAG,99984099,97793015,2191084,0,0.0234,0.9781,0.0219,0.0000
4,tih_rna_sample_00010_23KKJ7LT4_1,TTACGGACGC-ATTGGCCAGC,102002269,100562344,1439925,0,0.0239,0.9859,0.0141,0.0000
4,tih_rna_sample_00170_23KKJ7LT4_1,CCAATGTTGA-CTTGAATGTC,70215609,69453176,762433,0,0.0165,0.9891,0.0109,0.0000
4,tih_rna_sample_00012_23KKJ7LT4_1,CGTACTTAGA-CCGATGTTCA,89667063,88464362,1202701,0,0.0210,0.9866,0.0134,0.0000
4,tih_rna_sample_00013_23KKJ7LT4_1,GCCGTGAACA-GCACCACCAT,57186853,56267031,919822,0,0.0134,0.9839,0.0161,0.0000
4,tih_rna_sample_00176_23KKJ7LT4_1,AGGAGACCAC-TACCACGTAG,64266635,63399808,866827,0,0.0151,0.9865,0.0135,0.0000
4,tih_rna_sample_00015_23KKJ7LT4_1,GAAGCAAGCG-TCACCGACTA,109576135,107872980,1703155,0,0.0257,0.9845,0.0155,0.0000
4,tih_rna_sample_00016_23KKJ7LT4_1,AACGCGACTG-GACCTACGAG,55354218,54581099,773119,0,0.0130,0.9860,0.0140,0.0000
4,tih_rna_sample_00206_23KKJ7LT4_1,TTCGCGGACT-AGAGAGTGGT,109213876,107794723,1419153,0,0.0256,0.9870,0.0130,0.0000
4,FFPE_HD789_02_RNA_0005_23KKJ7LT4_1,TCGTGACGAC-GTGACTAACT,131719223,130069591,1649632,0,0.0309,0.9875,0.0125,0.0000
4,tih_rna_sample_00179_23KKJ7LT4_1,TCAATCTAGC-TCCGAATAAG,90972171,89838217,1133954,0,0.0213,0.9875,0.0125,0.0000
4,tih_rna_sample_00020_23KKJ7LT4_1,GCGGAGTCAA-CTCTATAGCT,92084809,90800329,1284480,0,0.0216,0.9861,0.0139,0.0000
4,tih_rna_sample_00021_23KKJ7LT4_1,GATGCTAGAA-TGGATGCCAG,87478318,86412806,1065512,0,0.0205,0.9878,0.0122,0.0000
4,tih_rna_sample_00022_23KKJ7LT4_1,ACGATGGTTA-AATTGCTAGG,99150970,97758778,1392192,0,0.0232,0.9860,0.0140,0.0000
4,tih_rna_sample_00023_23KKJ7LT4_1,AGAGCAGTAT-CAAGAGGAGG,113093541,111629197,1464344,0,0.0265,0.9871,0.0129,0.0000
4,tih_rna_sample_00180_23KKJ7LT4_1,TTGTGATCCT-ATGAAGGCAT,113972708,112571581,1401127,0,0.0267,0.9877,0.0123,0.0000
4,tih_rna_sample_00234_23KKJ7LT4_1,CCACCTGCTT-TGTTACCGTC,96058761,94441659,1617102,0,0.0225,0.9832,0.0168,0.0000
4,tih_rna_sample_00030_23KKJ7LT4_1,TGGTGGTTGT-TACCTGTCAA,127877234,126295074,1582160,0,0.0300,0.9876,0.0124,0.0000
4,tih_rna_sample_00198_23KKJ7LT4_1,ACGCAACACA-CATTCAGGAG,61433069,60552821,880248,0,0.0144,0.9857,0.0143,0.0000
4,tih_rna_sample_00032_23KKJ7LT4_1,CCAGTGCACT-CCTCCGTATC,112060703,109962170,2098533,0,0.0263,0.9813,0.0187,0.0000
4,tih_rna_sample_00200_23KKJ7LT4_1,CATCAGGCGT-CGTGTTACCG,26908735,26443099,465636,0,0.0063,0.9827,0.0173,0.0000
4,FFPE_V4_0001_RNA_0003_23KKJ7LT4_1,ATCCTAGAAC-TGAAGTCTGC,83136988,82172147,964841,0,0.0195,0.9884,0.0116,0.0000
4,tih_rna_sample_00034_23KKJ7LT4_1,GCCTAGAGTC-ATGGTTCTCT,68505620,67637764,867856,0,0.0161,0.9873,0.0127,0.0000
4,tih_rna_sample_00035_23KKJ7LT4_1,CTTACTCTCT-CTGCTTAAGG,75310966,74124720,1186246,0,0.0176,0.9842,0.0158,0.0000
4,tih_rna_sample_00036_23KKJ7LT4_1,CCGACAACCT-TTCTACCTGT,57613354,56793343,820011,0,0.0135,0.9858,0.0142,0.0000
4,tih_rna_sample_00037_23KKJ7LT4_1,GATCTGTATG-ATCGAAGAGC,161739156,159674926,2064230,0,0.0379,0.9872,0.0128,0.0000
4,tih_rna_sample_00202_23KKJ7LT4_1,ATAGGCAGTG-CAGAACTTAG,126089616,124688715,1400901,0,0.0295,0.9889,0.0111,0.0000
4,tih_rna_sample_00039_23KKJ7LT4_1,GAATAGAGTG-CACAGCGTCT,100844482,99598801,1245681,0,0.0236,0.9876,0.0124,0.0000
4,tih_rna_sample_00204_23KKJ7LT4_1,GTAACAGGAA-TGTCTTCAGA,4149923,4091699,58224,0,0.0010,0.9860,0.0140,0.0000
4,tih_rna_sample_00041_23KKJ7LT4_1,ATGGTTGTTG-AGTTATGAGG,91534449,90390639,1143810,0,0.0214,0.9875,0.0125,0.0000
4,tih_rna_sample_00042_23KKJ7LT4_1,ACAATAGCAC-GTATGCCTAT,69653068,68739935,913133,0,0.0163,0.9869,0.0131,0.0000
4,tih_rna_sample_00043_23KKJ7LT4_1,CTACAAGTTC-GCACCATGAA,92462257,91271008,1191249,0,0.0217,0.9871,0.0129,0.0000
4,tih_rna_sample_00024_23KKJ7LT4_1,TAAGATCGGA-TTCATCCGTG,80395099,79467101,927998,0,0.0188,0.9885,0.0115,0.0000
4,tih_rna_sample_00183_23KKJ7LT4_1,TTAGTTGCTG-ATGGCGGATT,74247220,73347094,900126,0,0.0174,0.9879,0.0121,0.0000
4,tih_rna_sample_00025_23KKJ7LT4_1,AGTCAGATGC-CTCACACACT,82299092,81076758,1222334,0,0.0193,0.9851,0.0149,0.0000
4,tih_rna_sample_00184_23KKJ7LT4_1,AGTACAACTG-CATTGAGTTC,119510636,118040414,1470222,0,0.0280,0.9877,0.0123,0.0000
4,tih_rna_sample_00027_23KKJ7LT4_1,CTTAGTACGC-GCTACAACGA,78452381,77384874,1067507,0,0.0184,0.9864,0.0136,0.0000
4,tih_rna_sample_00185_23KKJ7LT4_1,GTACGCATCG-GAGTTGTTCA,71880151,70686711,1193440,0,0.0168,0.9834,0.0166,0.0000
4,tih_rna_sample_00186_23KKJ7LT4_1,ACTTCCGTTC-CAATTCCGTG,113821431,112366963,1454468,0,0.0267,0.9872,0.0128,0.0000
4,tih_rna_sample_00207_23KKJ7LT4_1,AACCTGATCT-ATTCCGTCCG,77619298,76456778,1162520,0,0.0182,0.9850,0.0150,0.0000
4,Undetermined,,214139561,214139561,0,0,0.0502,1.0000,0.0000,0.0000