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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L004/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp06_07-73d51683
Published
Jun 07, 2026 11:51 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
4 tih_rna_sample_00001_23KKJ7LT4_1 TTGGATTGTC CGGCTGTTAG 1 11682108356 11257304901 458092540197 39.21 0.96
4 tih_rna_sample_00001_23KKJ7LT4_1 TTGGATTGTC CGGCTGTTAG 2 11682108356 11170827803 456430204436 39.07 0.96
4 tih_rna_sample_00002_23KKJ7LT4_1 AATTGGCACA CAGTCGGAGT 1 11325473083 10903030950 443900445921 39.19 0.96
4 tih_rna_sample_00002_23KKJ7LT4_1 AATTGGCACA CAGTCGGAGT 2 11325473083 10855646569 443114577529 39.13 0.96
4 NTC_0001_0001_23KKJ7LT4_1 AGGCAATCGC ATGAGTCTGT 1 225491320 155156360 7475272694 33.15 0.69
4 NTC_0001_0001_23KKJ7LT4_1 AGGCAATCGC ATGAGTCTGT 2 225491320 197156789 8480463524 37.61 0.87
4 tih_rna_sample_00004_23KKJ7LT4_1 TGCAACACTA CGTTCTGGTA 1 17673160347 17072590829 694052565572 39.27 0.97
4 tih_rna_sample_00004_23KKJ7LT4_1 TGCAACACTA CGTTCTGGTA 2 17673160347 16956284818 691880171761 39.15 0.96
4 tih_rna_sample_00005_23KKJ7LT4_1 GAATCGCCTG CATTGACGGC 1 7383401096 6876417776 284140121807 38.48 0.93
4 tih_rna_sample_00005_23KKJ7LT4_1 GAATCGCCTG CATTGACGGC 2 7383401096 6898362659 285017948063 38.60 0.93
4 tih_rna_sample_00006_23KKJ7LT4_1 TCGCATGACA TTGGCCAATG 1 12822928154 12212757229 499406490211 38.95 0.95
4 tih_rna_sample_00006_23KKJ7LT4_1 TCGCATGACA TTGGCCAATG 2 12822928154 12136382560 498406454440 38.87 0.95
4 tih_rna_sample_00007_23KKJ7LT4_1 TCAATACGTG GCTGCTAATA 1 13670590210 13116168174 534848750760 39.12 0.96
4 tih_rna_sample_00007_23KKJ7LT4_1 TCAATACGTG GCTGCTAATA 2 13670590210 13049739419 533700684389 39.04 0.95
4 tih_rna_sample_00008_23KKJ7LT4_1 ATTCTCCACG TCGATGATCG 1 2851309897 2541537393 107171786442 37.59 0.89
4 tih_rna_sample_00008_23KKJ7LT4_1 ATTCTCCACG TCGATGATCG 2 2851309897 2641663855 109642319560 38.45 0.93
4 tih_rna_sample_00009_23KKJ7LT4_1 TGTTACAGAG TGTGTACCAG 1 15097598949 14329891152 587064681237 38.88 0.95
4 tih_rna_sample_00009_23KKJ7LT4_1 TGTTACAGAG TGTGTACCAG 2 15097598949 14197410248 584594765471 38.72 0.94
4 tih_rna_sample_00010_23KKJ7LT4_1 TTACGGACGC ATTGGCCAGC 1 15402342619 14882811487 605190163690 39.29 0.97
4 tih_rna_sample_00010_23KKJ7LT4_1 TTACGGACGC ATTGGCCAGC 2 15402342619 14697958560 601308851220 39.04 0.95
4 tih_rna_sample_00170_23KKJ7LT4_1 CCAATGTTGA CTTGAATGTC 1 10602556959 9997889941 410536921987 38.72 0.94
4 tih_rna_sample_00170_23KKJ7LT4_1 CCAATGTTGA CTTGAATGTC 2 10602556959 10069770591 412963198869 38.95 0.95
4 tih_rna_sample_00012_23KKJ7LT4_1 CGTACTTAGA CCGATGTTCA 1 13539726513 12887270259 527248702053 38.94 0.95
4 tih_rna_sample_00012_23KKJ7LT4_1 CGTACTTAGA CCGATGTTCA 2 13539726513 12889246004 527871534548 38.99 0.95
4 tih_rna_sample_00013_23KKJ7LT4_1 GCCGTGAACA GCACCACCAT 1 8635214803 8223636865 336348676273 38.95 0.95
4 tih_rna_sample_00013_23KKJ7LT4_1 GCCGTGAACA GCACCACCAT 2 8635214803 8178707091 335669758788 38.87 0.95
4 tih_rna_sample_00176_23KKJ7LT4_1 AGGAGACCAC TACCACGTAG 1 9704261885 9091046287 374707454389 38.61 0.94
4 tih_rna_sample_00176_23KKJ7LT4_1 AGGAGACCAC TACCACGTAG 2 9704261885 9058951231 374317672387 38.57 0.93
4 tih_rna_sample_00015_23KKJ7LT4_1 GAAGCAAGCG TCACCGACTA 1 16545996385 15981832712 649958253530 39.28 0.97
4 tih_rna_sample_00015_23KKJ7LT4_1 GAAGCAAGCG TCACCGACTA 2 16545996385 15829674106 646864424590 39.09 0.96
4 tih_rna_sample_00016_23KKJ7LT4_1 AACGCGACTG GACCTACGAG 1 8358486918 7804471231 322086297256 38.53 0.93
4 tih_rna_sample_00016_23KKJ7LT4_1 AACGCGACTG GACCTACGAG 2 8358486918 7826633702 322976749775 38.64 0.94
4 tih_rna_sample_00206_23KKJ7LT4_1 TTCGCGGACT AGAGAGTGGT 1 16491295276 16019751256 649902465373 39.41 0.97
4 tih_rna_sample_00206_23KKJ7LT4_1 TTCGCGGACT AGAGAGTGGT 2 16491295276 15693250832 642287036585 38.95 0.95
4 FFPE_HD789_02_RNA_0005_23KKJ7LT4_1 TCGTGACGAC GTGACTAACT 1 19889602673 19382279031 785383246452 39.49 0.97
4 FFPE_HD789_02_RNA_0005_23KKJ7LT4_1 TCGTGACGAC GTGACTAACT 2 19889602673 19125295910 779691170789 39.20 0.96
4 tih_rna_sample_00179_23KKJ7LT4_1 TCAATCTAGC TCCGAATAAG 1 13736797821 13084030568 535073259944 38.95 0.95
4 tih_rna_sample_00179_23KKJ7LT4_1 TCAATCTAGC TCCGAATAAG 2 13736797821 13028365834 534359976037 38.90 0.95
4 tih_rna_sample_00020_23KKJ7LT4_1 GCGGAGTCAA CTCTATAGCT 1 13904806159 13256624437 542081238796 38.99 0.95
4 tih_rna_sample_00020_23KKJ7LT4_1 GCGGAGTCAA CTCTATAGCT 2 13904806159 13206651050 541421224622 38.94 0.95
4 tih_rna_sample_00021_23KKJ7LT4_1 GATGCTAGAA TGGATGCCAG 1 13209226018 12795897651 519623708352 39.34 0.97
4 tih_rna_sample_00021_23KKJ7LT4_1 GATGCTAGAA TGGATGCCAG 2 13209226018 12672643160 517098935672 39.15 0.96
4 tih_rna_sample_00022_23KKJ7LT4_1 ACGATGGTTA AATTGCTAGG 1 14971796470 14316038760 584554460736 39.04 0.96
4 tih_rna_sample_00022_23KKJ7LT4_1 ACGATGGTTA AATTGCTAGG 2 14971796470 14210968480 582716114188 38.92 0.95
4 tih_rna_sample_00023_23KKJ7LT4_1 AGAGCAGTAT CAAGAGGAGG 1 17077124691 16600686947 673455205913 39.44 0.97
4 tih_rna_sample_00023_23KKJ7LT4_1 AGAGCAGTAT CAAGAGGAGG 2 17077124691 16401336868 668965643041 39.17 0.96
4 tih_rna_sample_00180_23KKJ7LT4_1 TTGTGATCCT ATGAAGGCAT 1 17209878908 16419161741 671309064698 39.01 0.95
4 tih_rna_sample_00180_23KKJ7LT4_1 TTGTGATCCT ATGAAGGCAT 2 17209878908 16224558336 667267654332 38.77 0.94
4 tih_rna_sample_00234_23KKJ7LT4_1 CCACCTGCTT TGTTACCGTC 1 14504872911 13891481006 566943213071 39.09 0.96
4 tih_rna_sample_00234_23KKJ7LT4_1 CCACCTGCTT TGTTACCGTC 2 14504872911 13549347984 558857192613 38.53 0.93
4 tih_rna_sample_00030_23KKJ7LT4_1 TGGTGGTTGT TACCTGTCAA 1 19309462334 18745547778 760894685112 39.41 0.97
4 tih_rna_sample_00030_23KKJ7LT4_1 TGGTGGTTGT TACCTGTCAA 2 19309462334 18522805110 755848492134 39.14 0.96
4 tih_rna_sample_00198_23KKJ7LT4_1 ACGCAACACA CATTCAGGAG 1 9276393419 8728705826 358967932136 38.70 0.94
4 tih_rna_sample_00198_23KKJ7LT4_1 ACGCAACACA CATTCAGGAG 2 9276393419 8776230322 360485506867 38.86 0.95
4 tih_rna_sample_00032_23KKJ7LT4_1 CCAGTGCACT CCTCCGTATC 1 16921166153 16353729708 664833665892 39.29 0.97
4 tih_rna_sample_00032_23KKJ7LT4_1 CCAGTGCACT CCTCCGTATC 2 16921166153 16225226916 662141513388 39.13 0.96
4 tih_rna_sample_00200_23KKJ7LT4_1 CATCAGGCGT CGTGTTACCG 1 4063218985 3813477175 157176293224 38.68 0.94
4 tih_rna_sample_00200_23KKJ7LT4_1 CATCAGGCGT CGTGTTACCG 2 4063218985 3760889029 155995803973 38.39 0.93
4 FFPE_V4_0001_RNA_0003_23KKJ7LT4_1 ATCCTAGAAC TGAAGTCTGC 1 12553685188 12201180606 494943236874 39.43 0.97
4 FFPE_V4_0001_RNA_0003_23KKJ7LT4_1 ATCCTAGAAC TGAAGTCTGC 2 12553685188 12044145733 491435837920 39.15 0.96
4 tih_rna_sample_00034_23KKJ7LT4_1 GCCTAGAGTC ATGGTTCTCT 1 10344348620 9697553650 399409674367 38.61 0.94
4 tih_rna_sample_00034_23KKJ7LT4_1 GCCTAGAGTC ATGGTTCTCT 2 10344348620 9597262546 397531779679 38.43 0.93
4 tih_rna_sample_00035_23KKJ7LT4_1 CTTACTCTCT CTGCTTAAGG 1 11371955866 10854440310 443738972031 39.02 0.95
4 tih_rna_sample_00035_23KKJ7LT4_1 CTTACTCTCT CTGCTTAAGG 2 11371955866 10807985194 442967140363 38.95 0.95
4 tih_rna_sample_00036_23KKJ7LT4_1 CCGACAACCT TTCTACCTGT 1 8699616454 8167475875 336236214889 38.65 0.94
4 tih_rna_sample_00036_23KKJ7LT4_1 CCGACAACCT TTCTACCTGT 2 8699616454 8179167529 336910959292 38.73 0.94
4 tih_rna_sample_00037_23KKJ7LT4_1 GATCTGTATG ATCGAAGAGC 1 24422612556 23522799955 957440720863 39.20 0.96
4 tih_rna_sample_00037_23KKJ7LT4_1 GATCTGTATG ATCGAAGAGC 2 24422612556 23425948919 956081084018 39.15 0.96
4 tih_rna_sample_00202_23KKJ7LT4_1 ATAGGCAGTG CAGAACTTAG 1 19039532016 18264738311 744847614974 39.12 0.96
4 tih_rna_sample_00202_23KKJ7LT4_1 ATAGGCAGTG CAGAACTTAG 2 19039532016 18258376840 745228819381 39.14 0.96
4 tih_rna_sample_00039_23KKJ7LT4_1 GAATAGAGTG CACAGCGTCT 1 15227516782 14540198421 594200548764 39.02 0.95
4 tih_rna_sample_00039_23KKJ7LT4_1 GAATAGAGTG CACAGCGTCT 2 15227516782 14507080534 593940277909 39.00 0.95
4 tih_rna_sample_00204_23KKJ7LT4_1 GTAACAGGAA TGTCTTCAGA 1 626638373 471437589 21632719197 34.52 0.75
4 tih_rna_sample_00204_23KKJ7LT4_1 GTAACAGGAA TGTCTTCAGA 2 626638373 543237101 23410643915 37.36 0.87
4 tih_rna_sample_00041_23KKJ7LT4_1 ATGGTTGTTG AGTTATGAGG 1 13821701799 13210773461 539461701485 39.03 0.96
4 tih_rna_sample_00041_23KKJ7LT4_1 ATGGTTGTTG AGTTATGAGG 2 13821701799 13162780245 538934533689 38.99 0.95
4 tih_rna_sample_00042_23KKJ7LT4_1 ACAATAGCAC GTATGCCTAT 1 10517613268 10056363070 410753819191 39.05 0.96
4 tih_rna_sample_00042_23KKJ7LT4_1 ACAATAGCAC GTATGCCTAT 2 10517613268 9995804572 409634515078 38.95 0.95
4 tih_rna_sample_00043_23KKJ7LT4_1 CTACAAGTTC GCACCATGAA 1 13961800807 13329523987 544710852163 39.01 0.95
4 tih_rna_sample_00043_23KKJ7LT4_1 CTACAAGTTC GCACCATGAA 2 13961800807 13304099351 544651308455 39.01 0.95
4 tih_rna_sample_00024_23KKJ7LT4_1 TAAGATCGGA TTCATCCGTG 1 12139659949 11453687488 470430803896 38.75 0.94
4 tih_rna_sample_00024_23KKJ7LT4_1 TAAGATCGGA TTCATCCGTG 2 12139659949 11454291043 471022041508 38.80 0.94
4 tih_rna_sample_00183_23KKJ7LT4_1 TTAGTTGCTG ATGGCGGATT 1 11211330220 10584330785 434572387376 38.76 0.94
4 tih_rna_sample_00183_23KKJ7LT4_1 TTAGTTGCTG ATGGCGGATT 2 11211330220 10615826103 435847929003 38.88 0.95
4 tih_rna_sample_00025_23KKJ7LT4_1 AGTCAGATGC CTCACACACT 1 12427162892 11826645877 484045784755 38.95 0.95
4 tih_rna_sample_00025_23KKJ7LT4_1 AGTCAGATGC CTCACACACT 2 12427162892 11842430208 484856339181 39.02 0.95
4 tih_rna_sample_00184_23KKJ7LT4_1 AGTACAACTG CATTGAGTTC 1 18046106036 17258813806 704679946810 39.05 0.96
4 tih_rna_sample_00184_23KKJ7LT4_1 AGTACAACTG CATTGAGTTC 2 18046106036 17167046600 703290041699 38.97 0.95
4 tih_rna_sample_00027_23KKJ7LT4_1 CTTAGTACGC GCTACAACGA 1 11846309531 11333998496 462786560990 39.07 0.96
4 tih_rna_sample_00027_23KKJ7LT4_1 CTTAGTACGC GCTACAACGA 2 11846309531 11314317566 462680222348 39.06 0.96
4 tih_rna_sample_00185_23KKJ7LT4_1 GTACGCATCG GAGTTGTTCA 1 10853902801 10268379427 421313356723 38.82 0.95
4 tih_rna_sample_00185_23KKJ7LT4_1 GTACGCATCG GAGTTGTTCA 2 10853902801 10315377005 422820269297 38.96 0.95
4 tih_rna_sample_00186_23KKJ7LT4_1 ACTTCCGTTC CAATTCCGTG 1 17187036081 16624078044 675581367258 39.31 0.97
4 tih_rna_sample_00186_23KKJ7LT4_1 ACTTCCGTTC CAATTCCGTG 2 17187036081 16490866338 672878970249 39.15 0.96
4 tih_rna_sample_00207_23KKJ7LT4_1 AACCTGATCT ATTCCGTCCG 1 11720513998 11234013961 458428411129 39.11 0.96
4 tih_rna_sample_00207_23KKJ7LT4_1 AACCTGATCT ATTCCGTCCG 2 11720513998 11120489709 456178720587 38.92 0.95
4 Undetermined 1 32335073711 27121673004 1177995139788 36.43 0.84
4 Undetermined 2 32335073711 26790868889 1164500122511 36.01 0.83
99 rows