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Filename
Quality_Metrics.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L007/Reports/Quality_Metrics.csv
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10.2 KB
Workflow Run
dev_rna_exp06_07-73d51683
Published
Jun 07, 2026 11:54 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
7 tih_rna_sample_00044_23KKJ7LT4_1 GCGCGGTTAA AAGCTATAGC 1 12084951290 11464047523 469765194664 38.87 0.95
7 tih_rna_sample_00044_23KKJ7LT4_1 GCGCGGTTAA AAGCTATAGC 2 12084951290 11493497848 471056344387 38.98 0.95
7 FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 TTCCTTGAGG TAAGACAGCA 1 10679738646 10284207184 418838048518 39.22 0.96
7 FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 TTCCTTGAGG TAAGACAGCA 2 10679738646 10208127445 417316904170 39.08 0.96
7 tih_rna_sample_00208_23KKJ7LT4_1 GAGTCGCTTC AGCGAAGATT 1 14741688929 14127738338 576602971679 39.11 0.96
7 tih_rna_sample_00208_23KKJ7LT4_1 GAGTCGCTTC AGCGAAGATT 2 14741688929 13987370228 573766295804 38.92 0.95
7 tih_rna_sample_00045_23KKJ7LT4_1 GTACGCTCAA ATTGATGGCG 1 12523379488 11832228671 485817711185 38.79 0.94
7 tih_rna_sample_00045_23KKJ7LT4_1 GTACGCTCAA ATTGATGGCG 2 12523379488 11842605074 486707599769 38.86 0.95
7 tih_rna_sample_00046_23KKJ7LT4_1 TAGAAGATCG CGACCAGTGT 1 12017921182 11368900054 466635465751 38.83 0.95
7 tih_rna_sample_00046_23KKJ7LT4_1 TAGAAGATCG CGACCAGTGT 2 12017921182 11375758807 467251395907 38.88 0.95
7 tih_rna_sample_00047_23KKJ7LT4_1 AACCTAGTGC TACAGGTCCT 1 15733292641 14922690007 611848865584 38.89 0.95
7 tih_rna_sample_00047_23KKJ7LT4_1 AACCTAGTGC TACAGGTCCT 2 15733292641 14957024705 613187247734 38.97 0.95
7 tih_rna_sample_00048_23KKJ7LT4_1 CGTGTATGTC GCATCTCTAT 1 13208817412 12375049725 509884129725 38.60 0.94
7 tih_rna_sample_00048_23KKJ7LT4_1 CGTGTATGTC GCATCTCTAT 2 13208817412 12515944161 513988228758 38.91 0.95
7 tih_rna_sample_00216_23KKJ7LT4_1 TTCAGATCCA TGGCATTGGA 1 2666796655 2331161637 99250894452 37.22 0.87
7 tih_rna_sample_00216_23KKJ7LT4_1 TTCAGATCCA TGGCATTGGA 2 2666796655 2449410479 102170046269 38.31 0.92
7 tih_rna_sample_00050_23KKJ7LT4_1 CTCACCAGTT TTGGTGTGTC 1 14144710580 13435923033 550306664544 38.91 0.95
7 tih_rna_sample_00050_23KKJ7LT4_1 CTCACCAGTT TTGGTGTGTC 2 14144710580 13369266801 549470625219 38.85 0.95
7 tih_rna_sample_00051_23KKJ7LT4_1 ACTAGTAGTC ACGTACACTC 1 14871634546 14260380379 581826652981 39.12 0.96
7 tih_rna_sample_00051_23KKJ7LT4_1 ACTAGTAGTC ACGTACACTC 2 14871634546 13897955775 573719250120 38.58 0.93
7 tih_rna_sample_00052_23KKJ7LT4_1 AATAGACTGC TCAAGGTCGC 1 17872074610 17208008025 700827785697 39.21 0.96
7 tih_rna_sample_00052_23KKJ7LT4_1 AATAGACTGC TCAAGGTCGC 2 17872074610 17040308719 697554773173 39.03 0.95
7 tih_rna_sample_00053_23KKJ7LT4_1 ATGATCAACG GTATAGCGTC 1 6523727292 5915281347 247401168582 37.92 0.91
7 tih_rna_sample_00053_23KKJ7LT4_1 ATGATCAACG GTATAGCGTC 2 6523727292 5790328785 244203723552 37.43 0.89
7 tih_rna_sample_00054_23KKJ7LT4_1 TAGGAAGCGG CCAATCCAGG 1 2776599174 2490035175 104839957995 37.76 0.90
7 tih_rna_sample_00054_23KKJ7LT4_1 TAGGAAGCGG CCAATCCAGG 2 2776599174 2591606025 107238430530 38.62 0.93
7 NTC_0001_0001_23KKJ7LT4_2 GCATCCTACT GACATCGCGA 1 193901969 127430081 6285408308 32.42 0.66
7 NTC_0001_0001_23KKJ7LT4_2 GCATCCTACT GACATCGCGA 2 193901969 174753535 7404204466 38.19 0.90
7 tih_rna_sample_00056_23KKJ7LT4_1 AGTCCAGCGT TGTCGTATTG 1 10549247013 10093366345 412390138297 39.09 0.96
7 tih_rna_sample_00056_23KKJ7LT4_1 AGTCCAGCGT TGTCGTATTG 2 10549247013 10042870046 411381699932 39.00 0.95
7 tih_rna_sample_00057_23KKJ7LT4_1 AGGCAGCCAT GAGTGTCTAG 1 1733971052 1586739542 66180232415 38.17 0.92
7 tih_rna_sample_00057_23KKJ7LT4_1 AGGCAGCCAT GAGTGTCTAG 2 1733971052 1610264758 66753836467 38.50 0.93
7 tih_rna_sample_00058_23KKJ7LT4_1 GCGACTCGTA CAGGCCATGT 1 11601926148 11078701449 452792478690 39.03 0.95
7 tih_rna_sample_00058_23KKJ7LT4_1 GCGACTCGTA CAGGCCATGT 2 11601926148 11057802184 452749734073 39.02 0.95
7 tih_rna_sample_00219_23KKJ7LT4_1 GTATCTGAGG ACGTATCTTG 1 12732912675 12138189125 496538347700 39.00 0.95
7 tih_rna_sample_00219_23KKJ7LT4_1 GTATCTGAGG ACGTATCTTG 2 12732912675 12074112426 495415767651 38.91 0.95
7 tih_rna_sample_00060_23KKJ7LT4_1 CATCACCTAA TGGTGGTATT 1 8637449452 8068483560 333065963394 38.56 0.93
7 tih_rna_sample_00060_23KKJ7LT4_1 CATCACCTAA TGGTGGTATT 2 8637449452 8130673347 334867614183 38.77 0.94
7 tih_rna_sample_00061_23KKJ7LT4_1 CGGCATATAC ATGAGCTGGA 1 14636180246 14032213217 572581870067 39.12 0.96
7 tih_rna_sample_00061_23KKJ7LT4_1 CGGCATATAC ATGAGCTGGA 2 14636180246 13932104101 570699006853 38.99 0.95
7 tih_rna_sample_00223_23KKJ7LT4_1 CACGAGTGTC TAGGCTAGAG 1 15908202585 15239805073 621892593019 39.09 0.96
7 tih_rna_sample_00223_23KKJ7LT4_1 CACGAGTGTC TAGGCTAGAG 2 15908202585 15174861127 620930922160 39.03 0.95
7 tih_rna_sample_00063_23KKJ7LT4_1 CGGAGACTAT ATGCTTCTAC 1 16695706392 16029978568 654056411170 39.18 0.96
7 tih_rna_sample_00063_23KKJ7LT4_1 CGGAGACTAT ATGCTTCTAC 2 16695706392 15843235323 649904594091 38.93 0.95
7 tih_rna_sample_00064_23KKJ7LT4_1 AAGGTGTTAG TGTGCTGGTG 1 21074466604 20324759249 827361478196 39.26 0.96
7 tih_rna_sample_00064_23KKJ7LT4_1 AAGGTGTTAG TGTGCTGGTG 2 21074466604 20187640214 824720204372 39.13 0.96
7 FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 GCGATGGAAG GCCGCAAGAT 1 21093561762 20485886441 831492920585 39.42 0.97
7 FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 GCGATGGAAG GCCGCAAGAT 2 21093561762 20248586641 826191843247 39.17 0.96
7 tih_rna_sample_00224_23KKJ7LT4_1 ACGGTCGCAT GTACTCTCTA 1 12476491572 11849055688 485817206065 38.94 0.95
7 tih_rna_sample_00224_23KKJ7LT4_1 ACGGTCGCAT GTACTCTCTA 2 12476491572 11759544691 484015952605 38.79 0.94
7 tih_rna_sample_00225_23KKJ7LT4_1 TTACACACGG AACTCCGAGA 1 17752785516 16964042621 693303307388 39.05 0.96
7 tih_rna_sample_00225_23KKJ7LT4_1 TTACACACGG AACTCCGAGA 2 17752785516 16978018874 694117714004 39.10 0.96
7 tih_rna_sample_00066_23KKJ7LT4_1 CGAGATTAGA CTAATCGCGG 1 12822164849 12288526181 501473548460 39.11 0.96
7 tih_rna_sample_00066_23KKJ7LT4_1 CGAGATTAGA CTAATCGCGG 2 12822164849 12259764289 501258732589 39.09 0.96
7 tih_rna_sample_00226_23KKJ7LT4_1 CAAGGATCGA GCAGACACAA 1 12133585219 11210102001 465167604216 38.34 0.92
7 tih_rna_sample_00226_23KKJ7LT4_1 CAAGGATCGA GCAGACACAA 2 12133585219 11049155898 461569047138 38.04 0.91
7 tih_rna_sample_00068_23KKJ7LT4_1 ACAACACACA CATCGGCACT 1 13019427474 12369677590 506780774143 38.92 0.95
7 tih_rna_sample_00068_23KKJ7LT4_1 ACAACACACA CATCGGCACT 2 13019427474 12406762011 508066184055 39.02 0.95
7 tih_rna_sample_00239_23KKJ7LT4_1 AAGAGCTCGC CCAATAGATC 1 10817578845 10233004579 420020429368 38.83 0.95
7 tih_rna_sample_00239_23KKJ7LT4_1 AAGAGCTCGC CCAATAGATC 2 10817578845 10238057679 420581146224 38.88 0.95
7 tih_rna_sample_00070_23KKJ7LT4_1 ACAGAGGCGT GACATATCGG 1 14470601347 13934880086 567624962258 39.23 0.96
7 tih_rna_sample_00070_23KKJ7LT4_1 ACAGAGGCGT GACATATCGG 2 14470601347 13854313220 566031354692 39.12 0.96
7 tih_rna_sample_00071_23KKJ7LT4_1 AACTGTACGG CTCCAATATG 1 16059487522 15132721146 622486415754 38.76 0.94
7 tih_rna_sample_00071_23KKJ7LT4_1 AACTGTACGG CTCCAATATG 2 16059487522 15032729309 620434690010 38.63 0.94
7 tih_rna_sample_00072_23KKJ7LT4_1 GCGAAGTAGG ACCATTGTGT 1 17179142254 16359659163 669611528127 38.98 0.95
7 tih_rna_sample_00072_23KKJ7LT4_1 GCGAAGTAGG ACCATTGTGT 2 17179142254 16395961898 670993777799 39.06 0.95
7 tih_rna_sample_00073_23KKJ7LT4_1 GTGAAGACAC TGGCTTGATC 1 10377424415 9785624927 402058515998 38.74 0.94
7 tih_rna_sample_00073_23KKJ7LT4_1 GTGAAGACAC TGGCTTGATC 2 10377424415 9844396710 404034697068 38.93 0.95
7 tih_rna_sample_00074_23KKJ7LT4_1 GACTTAGGTC CTATGGACTT 1 22377958249 21201555295 869387850460 38.85 0.95
7 tih_rna_sample_00074_23KKJ7LT4_1 GACTTAGGTC CTATGGACTT 2 22377958249 21258650005 871841473687 38.96 0.95
7 tih_rna_sample_00243_23KKJ7LT4_1 AGGACGGACA GAAGTCGTGG 1 12935406997 12070413064 498156409366 38.51 0.93
7 tih_rna_sample_00243_23KKJ7LT4_1 AGGACGGACA GAAGTCGTGG 2 12935406997 12181326792 501495983277 38.77 0.94
7 tih_rna_sample_00244_23KKJ7LT4_1 CCTATGTGTA TAGTGAGTCG 1 16064555082 15322213181 626484269402 39.00 0.95
7 tih_rna_sample_00244_23KKJ7LT4_1 CCTATGTGTA TAGTGAGTCG 2 16064555082 15344182390 627652656958 39.07 0.96
7 tih_rna_sample_00077_23KKJ7LT4_1 CAACGTTGAC TTGGACGGAA 1 12321394036 11654261158 478532969521 38.84 0.95
7 tih_rna_sample_00077_23KKJ7LT4_1 CAACGTTGAC TTGGACGGAA 2 12321394036 11521539775 475689494578 38.61 0.94
7 tih_rna_sample_00078_23KKJ7LT4_1 TGACATAGGT TACCAGAGAT 1 16539478621 15810777295 645905535028 39.05 0.96
7 tih_rna_sample_00078_23KKJ7LT4_1 TGACATAGGT TACCAGAGAT 2 16539478621 15800907907 646257457231 39.07 0.96
7 tih_rna_sample_00079_23KKJ7LT4_1 TTACACCAAC ATGAGTTAGG 1 8893488223 8306589482 342856406462 38.55 0.93
7 tih_rna_sample_00079_23KKJ7LT4_1 TTACACCAAC ATGAGTTAGG 2 8893488223 8195591311 340496658694 38.29 0.92
7 tih_rna_sample_00080_23KKJ7LT4_1 CCTGGAATTA CGTCATCGAA 1 9586519484 8877012539 367701656285 38.36 0.93
7 tih_rna_sample_00080_23KKJ7LT4_1 CCTGGAATTA CGTCATCGAA 2 9586519484 8953926529 370152357952 38.61 0.93
7 tih_rna_sample_00081_23KKJ7LT4_1 GCAACATCAA TGACCTAGTT 1 13623364960 12944271995 530302003877 38.93 0.95
7 tih_rna_sample_00081_23KKJ7LT4_1 GCAACATCAA TGACCTAGTT 2 13623364960 12952157683 531029295322 38.98 0.95
7 tih_rna_sample_00082_23KKJ7LT4_1 ACAGCCAGGT TCATGGTACT 1 14407396673 13702067866 561037526779 38.94 0.95
7 tih_rna_sample_00082_23KKJ7LT4_1 ACAGCCAGGT TCATGGTACT 2 14407396673 13700150143 561534679573 38.98 0.95
7 tih_rna_sample_00083_23KKJ7LT4_1 TAGTCCATCT GACAGGACAG 1 12538860159 11936542453 488508672916 38.96 0.95
7 tih_rna_sample_00083_23KKJ7LT4_1 TAGTCCATCT GACAGGACAG 2 12538860159 11934566785 488980493701 39.00 0.95
7 tih_rna_sample_00084_23KKJ7LT4_1 GCCTCTCAGA CGTGACGACT 1 6708741250 6109438829 254897251745 37.99 0.91
7 tih_rna_sample_00084_23KKJ7LT4_1 GCCTCTCAGA CGTGACGACT 2 6708741250 6249760563 258790246482 38.58 0.93
7 tih_rna_sample_00245_23KKJ7LT4_1 TAGGTTCAAG ACTTACCGGC 1 19721284483 18756720784 767834794021 38.93 0.95
7 tih_rna_sample_00245_23KKJ7LT4_1 TAGGTTCAAG ACTTACCGGC 2 19721284483 18366852978 758921260230 38.48 0.93
7 tih_rna_sample_00086_23KKJ7LT4_1 AAGACTCTCG GCTCTCCTTC 1 15290633725 14516844897 594903875157 38.91 0.95
7 tih_rna_sample_00086_23KKJ7LT4_1 AAGACTCTCG GCTCTCCTTC 2 15290633725 14511968902 595349392162 38.94 0.95
7 tih_rna_sample_00247_23KKJ7LT4_1 GAAGATCGAC AGTGACCACG 1 8504356240 7990893816 329132531193 38.70 0.94
7 tih_rna_sample_00247_23KKJ7LT4_1 GAAGATCGAC AGTGACCACG 2 8504356240 7942914221 328323578252 38.61 0.93
7 Undetermined 1 34379318657 28594258746 1245385168692 36.22 0.83
7 Undetermined 2 34379318657 27930195906 1225077557601 35.63 0.81
99 rows