Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
7,tih_rna_sample_00044_23KKJ7LT4_1,GCGCGGTTAA-AAGCTATAGC,80032790,78603315,1429475,0,0.0187,0.9821,0.0179,0.0000
7,FFPE_V4_0001_RNA_0002_23KKJ7LT4_1,TTCCTTGAGG-TAAGACAGCA,70726746,69534580,1192166,0,0.0165,0.9831,0.0169,0.0000
7,tih_rna_sample_00208_23KKJ7LT4_1,GAGTCGCTTC-AGCGAAGATT,97627079,95745293,1881786,0,0.0228,0.9807,0.0193,0.0000
7,tih_rna_sample_00045_23KKJ7LT4_1,GTACGCTCAA-ATTGATGGCG,82936288,81516390,1419898,0,0.0194,0.9829,0.0171,0.0000
7,tih_rna_sample_00046_23KKJ7LT4_1,TAGAAGATCG-CGACCAGTGT,79588882,77578089,2010793,0,0.0186,0.9747,0.0253,0.0000
7,tih_rna_sample_00047_23KKJ7LT4_1,AACCTAGTGC-TACAGGTCCT,104193991,102545071,1648920,0,0.0244,0.9842,0.0158,0.0000
7,tih_rna_sample_00048_23KKJ7LT4_1,CGTGTATGTC-GCATCTCTAT,87475612,86164216,1311396,0,0.0205,0.9850,0.0150,0.0000
7,tih_rna_sample_00216_23KKJ7LT4_1,TTCAGATCCA-TGGCATTGGA,17660905,17355276,305629,0,0.0041,0.9827,0.0173,0.0000
7,tih_rna_sample_00050_23KKJ7LT4_1,CTCACCAGTT-TTGGTGTGTC,93673580,91743073,1930507,0,0.0219,0.9794,0.0206,0.0000
7,tih_rna_sample_00051_23KKJ7LT4_1,ACTAGTAGTC-ACGTACACTC,98487646,96955627,1532019,0,0.0230,0.9844,0.0156,0.0000
7,tih_rna_sample_00052_23KKJ7LT4_1,AATAGACTGC-TCAAGGTCGC,118358110,116230118,2127992,0,0.0277,0.9820,0.0180,0.0000
7,tih_rna_sample_00053_23KKJ7LT4_1,ATGATCAACG-GTATAGCGTC,43203492,42434592,768900,0,0.0101,0.9822,0.0178,0.0000
7,tih_rna_sample_00054_23KKJ7LT4_1,TAGGAAGCGG-CCAATCCAGG,18388074,18068025,320049,0,0.0043,0.9826,0.0174,0.0000
7,NTC_0001_0001_23KKJ7LT4_2,GCATCCTACT-GACATCGCGA,1284119,1257415,26704,0,0.0003,0.9792,0.0208,0.0000
7,tih_rna_sample_00056_23KKJ7LT4_1,AGTCCAGCGT-TGTCGTATTG,69862563,68571279,1291284,0,0.0163,0.9815,0.0185,0.0000
7,tih_rna_sample_00057_23KKJ7LT4_1,AGGCAGCCAT-GAGTGTCTAG,11483252,11276171,207081,0,0.0027,0.9820,0.0180,0.0000
7,tih_rna_sample_00058_23KKJ7LT4_1,GCGACTCGTA-CAGGCCATGT,76833948,74604376,2229572,0,0.0180,0.9710,0.0290,0.0000
7,tih_rna_sample_00219_23KKJ7LT4_1,GTATCTGAGG-ACGTATCTTG,84323925,83085952,1237973,0,0.0197,0.9853,0.0147,0.0000
7,tih_rna_sample_00060_23KKJ7LT4_1,CATCACCTAA-TGGTGGTATT,57201652,55455156,1746496,0,0.0134,0.9695,0.0305,0.0000
7,tih_rna_sample_00061_23KKJ7LT4_1,CGGCATATAC-ATGAGCTGGA,96928346,95236632,1691714,0,0.0227,0.9825,0.0175,0.0000
7,tih_rna_sample_00223_23KKJ7LT4_1,CACGAGTGTC-TAGGCTAGAG,105352335,103818863,1533472,0,0.0246,0.9854,0.0146,0.0000
7,tih_rna_sample_00063_23KKJ7LT4_1,CGGAGACTAT-ATGCTTCTAC,110567592,108352025,2215567,0,0.0259,0.9800,0.0200,0.0000
7,tih_rna_sample_00064_23KKJ7LT4_1,AAGGTGTTAG-TGTGCTGGTG,139566004,136955538,2610466,0,0.0326,0.9813,0.0187,0.0000
7,FFPE_HD789_02_RNA_0006_23KKJ7LT4_1,GCGATGGAAG-GCCGCAAGAT,139692462,137253293,2439169,0,0.0327,0.9825,0.0175,0.0000
7,tih_rna_sample_00224_23KKJ7LT4_1,ACGGTCGCAT-GTACTCTCTA,82625772,81282065,1343707,0,0.0193,0.9837,0.0163,0.0000
7,tih_rna_sample_00225_23KKJ7LT4_1,TTACACACGG-AACTCCGAGA,117568116,115635568,1932548,0,0.0275,0.9836,0.0164,0.0000
7,tih_rna_sample_00066_23KKJ7LT4_1,CGAGATTAGA-CTAATCGCGG,84914999,83125962,1789037,0,0.0199,0.9789,0.0211,0.0000
7,tih_rna_sample_00226_23KKJ7LT4_1,CAAGGATCGA-GCAGACACAA,80354869,79009673,1345196,0,0.0188,0.9833,0.0167,0.0000
7,tih_rna_sample_00068_23KKJ7LT4_1,ACAACACACA-CATCGGCACT,86221374,84840014,1381360,0,0.0202,0.9840,0.0160,0.0000
7,tih_rna_sample_00239_23KKJ7LT4_1,AAGAGCTCGC-CCAATAGATC,71639595,70457030,1182565,0,0.0168,0.9835,0.0165,0.0000
7,tih_rna_sample_00070_23KKJ7LT4_1,ACAGAGGCGT-GACATATCGG,95831797,94211269,1620528,0,0.0224,0.9831,0.0169,0.0000
7,tih_rna_sample_00071_23KKJ7LT4_1,AACTGTACGG-CTCCAATATG,106354222,104421817,1932405,0,0.0249,0.9818,0.0182,0.0000
7,tih_rna_sample_00072_23KKJ7LT4_1,GCGAAGTAGG-ACCATTGTGT,113769154,111979554,1789600,0,0.0266,0.9843,0.0157,0.0000
7,tih_rna_sample_00073_23KKJ7LT4_1,GTGAAGACAC-TGGCTTGATC,68724665,67657281,1067384,0,0.0161,0.9845,0.0155,0.0000
7,tih_rna_sample_00074_23KKJ7LT4_1,GACTTAGGTC-CTATGGACTT,148198399,146102239,2096160,0,0.0347,0.9859,0.0141,0.0000
7,tih_rna_sample_00243_23KKJ7LT4_1,AGGACGGACA-GAAGTCGTGG,85664947,83930670,1734277,0,0.0200,0.9798,0.0202,0.0000
7,tih_rna_sample_00244_23KKJ7LT4_1,CCTATGTGTA-TAGTGAGTCG,106387782,104644606,1743176,0,0.0249,0.9836,0.0164,0.0000
7,tih_rna_sample_00077_23KKJ7LT4_1,CAACGTTGAC-TTGGACGGAA,81598636,80110662,1487974,0,0.0191,0.9818,0.0182,0.0000
7,tih_rna_sample_00078_23KKJ7LT4_1,TGACATAGGT-TACCAGAGAT,109532971,107938002,1594969,0,0.0256,0.9854,0.0146,0.0000
7,tih_rna_sample_00079_23KKJ7LT4_1,TTACACCAAC-ATGAGTTAGG,58897273,57915568,981705,0,0.0138,0.9833,0.0167,0.0000
7,tih_rna_sample_00080_23KKJ7LT4_1,CCTGGAATTA-CGTCATCGAA,63486884,61947461,1539423,0,0.0148,0.9758,0.0242,0.0000
7,tih_rna_sample_00081_23KKJ7LT4_1,GCAACATCAA-TGACCTAGTT,90220960,88555453,1665507,0,0.0211,0.9815,0.0185,0.0000
7,tih_rna_sample_00082_23KKJ7LT4_1,ACAGCCAGGT-TCATGGTACT,95413223,93824134,1589089,0,0.0223,0.9833,0.0167,0.0000
7,tih_rna_sample_00083_23KKJ7LT4_1,TAGTCCATCT-GACAGGACAG,83038809,81620359,1418450,0,0.0194,0.9829,0.0171,0.0000
7,tih_rna_sample_00084_23KKJ7LT4_1,GCCTCTCAGA-CGTGACGACT,44428750,43587814,840936,0,0.0104,0.9811,0.0189,0.0000
7,tih_rna_sample_00245_23KKJ7LT4_1,TAGGTTCAAG-ACTTACCGGC,130604533,128612967,1991566,0,0.0305,0.9848,0.0152,0.0000
7,tih_rna_sample_00086_23KKJ7LT4_1,AAGACTCTCG-GCTCTCCTTC,101262475,99346843,1915632,0,0.0237,0.9811,0.0189,0.0000
7,tih_rna_sample_00247_23KKJ7LT4_1,GAAGATCGAC-AGTGACCACG,56320240,55386743,933497,0,0.0132,0.9834,0.0166,0.0000
7,Undetermined,,227677607,227677607,0,0,0.0532,1.0000,0.0000,0.0000