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Filename
Quality_Metrics.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L006/Reports/Quality_Metrics.csv
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10.2 KB
Workflow Run
dev_rna_exp06_07-73d51683
Published
Jun 07, 2026 11:55 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
6 tih_rna_sample_00044_23KKJ7LT4_1 GCGCGGTTAA AAGCTATAGC 1 11948675300 11325026438 464278278392 38.86 0.95
6 tih_rna_sample_00044_23KKJ7LT4_1 GCGCGGTTAA AAGCTATAGC 2 11948675300 11355083830 465563239654 38.96 0.95
6 FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 TTCCTTGAGG TAAGACAGCA 1 10542304939 10144807247 413319674000 39.21 0.96
6 FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 TTCCTTGAGG TAAGACAGCA 2 10542304939 10068348499 411780107866 39.06 0.96
6 tih_rna_sample_00208_23KKJ7LT4_1 GAGTCGCTTC AGCGAAGATT 1 14596842179 13978748667 570758707746 39.10 0.96
6 tih_rna_sample_00208_23KKJ7LT4_1 GAGTCGCTTC AGCGAAGATT 2 14596842179 13842541137 568015090026 38.91 0.95
6 tih_rna_sample_00045_23KKJ7LT4_1 GTACGCTCAA ATTGATGGCG 1 12408084344 11711997700 481089008875 38.77 0.94
6 tih_rna_sample_00045_23KKJ7LT4_1 GTACGCTCAA ATTGATGGCG 2 12408084344 11721379101 481972886298 38.84 0.94
6 tih_rna_sample_00046_23KKJ7LT4_1 TAGAAGATCG CGACCAGTGT 1 11864952746 11210948417 460396173968 38.80 0.94
6 tih_rna_sample_00046_23KKJ7LT4_1 TAGAAGATCG CGACCAGTGT 2 11864952746 11217597385 461018793271 38.86 0.95
6 tih_rna_sample_00047_23KKJ7LT4_1 AACCTAGTGC TACAGGTCCT 1 15560723499 14751628981 605059789903 38.88 0.95
6 tih_rna_sample_00047_23KKJ7LT4_1 AACCTAGTGC TACAGGTCCT 2 15560723499 14777822146 606145522849 38.95 0.95
6 tih_rna_sample_00048_23KKJ7LT4_1 CGTGTATGTC GCATCTCTAT 1 13105729410 12268013726 505699809572 38.59 0.94
6 tih_rna_sample_00048_23KKJ7LT4_1 CGTGTATGTC GCATCTCTAT 2 13105729410 12407142956 509742785456 38.89 0.95
6 tih_rna_sample_00216_23KKJ7LT4_1 TTCAGATCCA TGGCATTGGA 1 2643428650 2306581317 98277447483 37.18 0.87
6 tih_rna_sample_00216_23KKJ7LT4_1 TTCAGATCCA TGGCATTGGA 2 2643428650 2426029550 101233085696 38.30 0.92
6 tih_rna_sample_00050_23KKJ7LT4_1 CTCACCAGTT TTGGTGTGTC 1 13985711657 13273773618 543903613809 38.89 0.95
6 tih_rna_sample_00050_23KKJ7LT4_1 CTCACCAGTT TTGGTGTGTC 2 13985711657 13209598252 543097151698 38.83 0.94
6 tih_rna_sample_00051_23KKJ7LT4_1 ACTAGTAGTC ACGTACACTC 1 14733058826 14115835000 576170765617 39.11 0.96
6 tih_rna_sample_00051_23KKJ7LT4_1 ACTAGTAGTC ACGTACACTC 2 14733058826 13774455933 568634667294 38.60 0.93
6 tih_rna_sample_00052_23KKJ7LT4_1 AATAGACTGC TCAAGGTCGC 1 17633191100 16966590560 691272836033 39.20 0.96
6 tih_rna_sample_00052_23KKJ7LT4_1 AATAGACTGC TCAAGGTCGC 2 17633191100 16794880944 687862534908 39.01 0.95
6 tih_rna_sample_00053_23KKJ7LT4_1 ATGATCAACG GTATAGCGTC 1 6459064562 5849261247 244765211913 37.89 0.91
6 tih_rna_sample_00053_23KKJ7LT4_1 ATGATCAACG GTATAGCGTC 2 6459064562 5728874919 241728664755 37.42 0.89
6 tih_rna_sample_00054_23KKJ7LT4_1 TAGGAAGCGG CCAATCCAGG 1 2750999238 2462745056 103771118381 37.72 0.90
6 tih_rna_sample_00054_23KKJ7LT4_1 TAGGAAGCGG CCAATCCAGG 2 2750999238 2563123865 106154826041 38.59 0.93
6 NTC_0001_0001_23KKJ7LT4_2 GCATCCTACT GACATCGCGA 1 193984264 127545873 6289489725 32.42 0.66
6 NTC_0001_0001_23KKJ7LT4_2 GCATCCTACT GACATCGCGA 2 193984264 173618795 7383691382 38.06 0.90
6 tih_rna_sample_00056_23KKJ7LT4_1 AGTCCAGCGT TGTCGTATTG 1 10423491193 9968020936 407410960891 39.09 0.96
6 tih_rna_sample_00056_23KKJ7LT4_1 AGTCCAGCGT TGTCGTATTG 2 10423491193 9914476334 406295981270 38.98 0.95
6 tih_rna_sample_00057_23KKJ7LT4_1 AGGCAGCCAT GAGTGTCTAG 1 1722446279 1576126067 65747809349 38.17 0.92
6 tih_rna_sample_00057_23KKJ7LT4_1 AGGCAGCCAT GAGTGTCTAG 2 1722446279 1596831116 66251751155 38.46 0.93
6 tih_rna_sample_00058_23KKJ7LT4_1 GCGACTCGTA CAGGCCATGT 1 11453793940 10927615866 446814168213 39.01 0.95
6 tih_rna_sample_00058_23KKJ7LT4_1 GCGACTCGTA CAGGCCATGT 2 11453793940 10904900063 446727884402 39.00 0.95
6 tih_rna_sample_00219_23KKJ7LT4_1 GTATCTGAGG ACGTATCTTG 1 12585560080 11988953807 490628161472 38.98 0.95
6 tih_rna_sample_00219_23KKJ7LT4_1 GTATCTGAGG ACGTATCTTG 2 12585560080 11923112839 489451892152 38.89 0.95
6 tih_rna_sample_00060_23KKJ7LT4_1 CATCACCTAA TGGTGGTATT 1 8548753562 7976626268 329433425279 38.54 0.93
6 tih_rna_sample_00060_23KKJ7LT4_1 CATCACCTAA TGGTGGTATT 2 8548753562 8039377150 331257614986 38.75 0.94
6 tih_rna_sample_00061_23KKJ7LT4_1 CGGCATATAC ATGAGCTGGA 1 14492546630 13886394260 566843714888 39.11 0.96
6 tih_rna_sample_00061_23KKJ7LT4_1 CGGCATATAC ATGAGCTGGA 2 14492546630 13779426259 564760190377 38.97 0.95
6 tih_rna_sample_00223_23KKJ7LT4_1 CACGAGTGTC TAGGCTAGAG 1 15711757021 15038961199 613958838553 39.08 0.96
6 tih_rna_sample_00223_23KKJ7LT4_1 CACGAGTGTC TAGGCTAGAG 2 15711757021 14971609192 612936454501 39.01 0.95
6 tih_rna_sample_00063_23KKJ7LT4_1 CGGAGACTAT ATGCTTCTAC 1 16557900923 15891127628 648570975836 39.17 0.96
6 tih_rna_sample_00063_23KKJ7LT4_1 CGGAGACTAT ATGCTTCTAC 2 16557900923 15697302761 644227817123 38.91 0.95
6 tih_rna_sample_00064_23KKJ7LT4_1 AAGGTGTTAG TGTGCTGGTG 1 20800540826 20051926671 816494044284 39.25 0.96
6 tih_rna_sample_00064_23KKJ7LT4_1 AAGGTGTTAG TGTGCTGGTG 2 20800540826 19906772269 813623478424 39.12 0.96
6 FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 GCGATGGAAG GCCGCAAGAT 1 20819360711 20208999534 820516384923 39.41 0.97
6 FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 GCGATGGAAG GCCGCAAGAT 2 20819360711 19968087167 815113317293 39.15 0.96
6 tih_rna_sample_00224_23KKJ7LT4_1 ACGGTCGCAT GTACTCTCTA 1 12380380978 11754346553 482053368023 38.94 0.95
6 tih_rna_sample_00224_23KKJ7LT4_1 ACGGTCGCAT GTACTCTCTA 2 12380380978 11658600170 480070227413 38.78 0.94
6 tih_rna_sample_00225_23KKJ7LT4_1 TTACACACGG AACTCCGAGA 1 17516982255 16721799755 683723073509 39.03 0.95
6 tih_rna_sample_00225_23KKJ7LT4_1 TTACACACGG AACTCCGAGA 2 17516982255 16734901200 684535499922 39.08 0.96
6 tih_rna_sample_00066_23KKJ7LT4_1 CGAGATTAGA CTAATCGCGG 1 12666782074 12128608223 495154235912 39.09 0.96
6 tih_rna_sample_00066_23KKJ7LT4_1 CGAGATTAGA CTAATCGCGG 2 12666782074 12097301116 494898492982 39.07 0.96
6 tih_rna_sample_00226_23KKJ7LT4_1 CAAGGATCGA GCAGACACAA 1 12006091540 11081845402 460032578815 38.32 0.92
6 tih_rna_sample_00226_23KKJ7LT4_1 CAAGGATCGA GCAGACACAA 2 12006091540 10921136458 456464156032 38.02 0.91
6 tih_rna_sample_00068_23KKJ7LT4_1 ACAACACACA CATCGGCACT 1 12891442290 12235536349 501515979577 38.90 0.95
6 tih_rna_sample_00068_23KKJ7LT4_1 ACAACACACA CATCGGCACT 2 12891442290 12271495722 502795695450 39.00 0.95
6 tih_rna_sample_00239_23KKJ7LT4_1 AAGAGCTCGC CCAATAGATC 1 10708501579 10124502561 415725682959 38.82 0.95
6 tih_rna_sample_00239_23KKJ7LT4_1 AAGAGCTCGC CCAATAGATC 2 10708501579 10123939721 416112841859 38.86 0.95
6 tih_rna_sample_00070_23KKJ7LT4_1 ACAGAGGCGT GACATATCGG 1 14297251837 13761532711 560741147659 39.22 0.96
6 tih_rna_sample_00070_23KKJ7LT4_1 ACAGAGGCGT GACATATCGG 2 14297251837 13674580219 558965998531 39.10 0.96
6 tih_rna_sample_00071_23KKJ7LT4_1 AACTGTACGG CTCCAATATG 1 15891911799 14959287542 615648017390 38.74 0.94
6 tih_rna_sample_00071_23KKJ7LT4_1 AACTGTACGG CTCCAATATG 2 15891911799 14862969091 613692215629 38.62 0.94
6 tih_rna_sample_00072_23KKJ7LT4_1 GCGAAGTAGG ACCATTGTGT 1 16974170475 16147203429 661235827368 38.96 0.95
6 tih_rna_sample_00072_23KKJ7LT4_1 GCGAAGTAGG ACCATTGTGT 2 16974170475 16185132497 662673589181 39.04 0.95
6 tih_rna_sample_00073_23KKJ7LT4_1 GTGAAGACAC TGGCTTGATC 1 10284491012 9691266942 398356587714 38.73 0.94
6 tih_rna_sample_00073_23KKJ7LT4_1 GTGAAGACAC TGGCTTGATC 2 10284491012 9746315311 400204184032 38.91 0.95
6 tih_rna_sample_00074_23KKJ7LT4_1 GACTTAGGTC CTATGGACTT 1 22148048367 20967962164 860177433310 38.84 0.95
6 tih_rna_sample_00074_23KKJ7LT4_1 GACTTAGGTC CTATGGACTT 2 22148048367 21018478100 862423676702 38.94 0.95
6 tih_rna_sample_00243_23KKJ7LT4_1 AGGACGGACA GAAGTCGTGG 1 12784137009 11917402679 492075146924 38.49 0.93
6 tih_rna_sample_00243_23KKJ7LT4_1 AGGACGGACA GAAGTCGTGG 2 12784137009 12024919413 495322269600 38.75 0.94
6 tih_rna_sample_00244_23KKJ7LT4_1 CCTATGTGTA TAGTGAGTCG 1 15887711130 15139866088 619291218775 38.98 0.95
6 tih_rna_sample_00244_23KKJ7LT4_1 CCTATGTGTA TAGTGAGTCG 2 15887711130 15159906155 620422689491 39.05 0.95
6 tih_rna_sample_00077_23KKJ7LT4_1 CAACGTTGAC TTGGACGGAA 1 12186735860 11522608333 473268924661 38.83 0.95
6 tih_rna_sample_00077_23KKJ7LT4_1 CAACGTTGAC TTGGACGGAA 2 12186735860 11385385759 470267419036 38.59 0.93
6 tih_rna_sample_00078_23KKJ7LT4_1 TGACATAGGT TACCAGAGAT 1 16347998088 15617585378 638263656782 39.04 0.96
6 tih_rna_sample_00078_23KKJ7LT4_1 TGACATAGGT TACCAGAGAT 2 16347998088 15604295014 638499020680 39.06 0.95
6 tih_rna_sample_00079_23KKJ7LT4_1 TTACACCAAC ATGAGTTAGG 1 8793736868 8208978410 338940143174 38.54 0.93
6 tih_rna_sample_00079_23KKJ7LT4_1 TTACACCAAC ATGAGTTAGG 2 8793736868 8095581189 336499639041 38.27 0.92
6 tih_rna_sample_00080_23KKJ7LT4_1 CCTGGAATTA CGTCATCGAA 1 9508368679 8797032813 364549444047 38.34 0.93
6 tih_rna_sample_00080_23KKJ7LT4_1 CCTGGAATTA CGTCATCGAA 2 9508368679 8874597403 366993932215 38.60 0.93
6 tih_rna_sample_00081_23KKJ7LT4_1 GCAACATCAA TGACCTAGTT 1 13479319718 12793871836 524389722298 38.90 0.95
6 tih_rna_sample_00081_23KKJ7LT4_1 GCAACATCAA TGACCTAGTT 2 13479319718 12802925490 525157483110 38.96 0.95
6 tih_rna_sample_00082_23KKJ7LT4_1 ACAGCCAGGT TCATGGTACT 1 14275987111 13569197303 555801800336 38.93 0.95
6 tih_rna_sample_00082_23KKJ7LT4_1 ACAGCCAGGT TCATGGTACT 2 14275987111 13564394104 556186072756 38.96 0.95
6 tih_rna_sample_00083_23KKJ7LT4_1 TAGTCCATCT GACAGGACAG 1 12420271101 11816508340 483774425611 38.95 0.95
6 tih_rna_sample_00083_23KKJ7LT4_1 TAGTCCATCT GACAGGACAG 2 12420271101 11808688125 484084118091 38.98 0.95
6 tih_rna_sample_00084_23KKJ7LT4_1 GCCTCTCAGA CGTGACGACT 1 6666176464 6063815046 253106399025 37.97 0.91
6 tih_rna_sample_00084_23KKJ7LT4_1 GCCTCTCAGA CGTGACGACT 2 6666176464 6204968633 257031810065 38.56 0.93
6 tih_rna_sample_00245_23KKJ7LT4_1 TAGGTTCAAG ACTTACCGGC 1 19464377160 18496808880 757534239744 38.92 0.95
6 tih_rna_sample_00245_23KKJ7LT4_1 TAGGTTCAAG ACTTACCGGC 2 19464377160 18110980546 748741371991 38.47 0.93
6 tih_rna_sample_00086_23KKJ7LT4_1 AAGACTCTCG GCTCTCCTTC 1 15157396610 14376950916 589419782886 38.89 0.95
6 tih_rna_sample_00086_23KKJ7LT4_1 AAGACTCTCG GCTCTCCTTC 2 15157396610 14369772755 589828681487 38.91 0.95
6 tih_rna_sample_00247_23KKJ7LT4_1 GAAGATCGAC AGTGACCACG 1 8429057825 7918477456 326229276958 38.70 0.94
6 tih_rna_sample_00247_23KKJ7LT4_1 GAAGATCGAC AGTGACCACG 2 8429057825 7864132563 325238324436 38.59 0.93
6 Undetermined 1 33891693451 28009167894 1224030414888 36.12 0.83
6 Undetermined 2 33891693451 27423159921 1205009435382 35.55 0.81
99 rows