Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
6,tih_rna_sample_00044_23KKJ7LT4_1,GCGCGGTTAA-AAGCTATAGC,79130300,77737254,1393046,0,0.0187,0.9824,0.0176,0.0000
6,FFPE_V4_0001_RNA_0002_23KKJ7LT4_1,TTCCTTGAGG-TAAGACAGCA,69816589,68658853,1157736,0,0.0165,0.9834,0.0166,0.0000
6,tih_rna_sample_00208_23KKJ7LT4_1,GAGTCGCTTC-AGCGAAGATT,96667829,94836239,1831590,0,0.0229,0.9811,0.0189,0.0000
6,tih_rna_sample_00045_23KKJ7LT4_1,GTACGCTCAA-ATTGATGGCG,82172744,80790041,1382703,0,0.0194,0.9832,0.0168,0.0000
6,tih_rna_sample_00046_23KKJ7LT4_1,TAGAAGATCG-CGACCAGTGT,78575846,76577028,1998818,0,0.0186,0.9746,0.0254,0.0000
6,tih_rna_sample_00047_23KKJ7LT4_1,AACCTAGTGC-TACAGGTCCT,103051149,101452566,1598583,0,0.0244,0.9845,0.0155,0.0000
6,tih_rna_sample_00048_23KKJ7LT4_1,CGTGTATGTC-GCATCTCTAT,86792910,85520235,1272675,0,0.0205,0.9853,0.0147,0.0000
6,tih_rna_sample_00216_23KKJ7LT4_1,TTCAGATCCA-TGGCATTGGA,17506150,17206775,299375,0,0.0041,0.9829,0.0171,0.0000
6,tih_rna_sample_00050_23KKJ7LT4_1,CTCACCAGTT-TTGGTGTGTC,92620607,90713211,1907396,0,0.0219,0.9794,0.0206,0.0000
6,tih_rna_sample_00051_23KKJ7LT4_1,ACTAGTAGTC-ACGTACACTC,97569926,96087326,1482600,0,0.0231,0.9848,0.0152,0.0000
6,tih_rna_sample_00052_23KKJ7LT4_1,AATAGACTGC-TCAAGGTCGC,116776100,114696222,2079878,0,0.0276,0.9822,0.0178,0.0000
6,tih_rna_sample_00053_23KKJ7LT4_1,ATGATCAACG-GTATAGCGTC,42775262,42019409,755853,0,0.0101,0.9823,0.0177,0.0000
6,tih_rna_sample_00054_23KKJ7LT4_1,TAGGAAGCGG-CCAATCCAGG,18218538,17906056,312482,0,0.0043,0.9828,0.0172,0.0000
6,NTC_0001_0001_23KKJ7LT4_2,GCATCCTACT-GACATCGCGA,1284664,1258118,26546,0,0.0003,0.9793,0.0207,0.0000
6,tih_rna_sample_00056_23KKJ7LT4_1,AGTCCAGCGT-TGTCGTATTG,69029743,67761811,1267932,0,0.0163,0.9816,0.0184,0.0000
6,tih_rna_sample_00057_23KKJ7LT4_1,AGGCAGCCAT-GAGTGTCTAG,11406929,11203401,203528,0,0.0027,0.9822,0.0178,0.0000
6,tih_rna_sample_00058_23KKJ7LT4_1,GCGACTCGTA-CAGGCCATGT,75852940,73566624,2286316,0,0.0179,0.9699,0.0301,0.0000
6,tih_rna_sample_00219_23KKJ7LT4_1,GTATCTGAGG-ACGTATCTTG,83348080,82155589,1192491,0,0.0197,0.9857,0.0143,0.0000
6,tih_rna_sample_00060_23KKJ7LT4_1,CATCACCTAA-TGGTGGTATT,56614262,54867086,1747176,0,0.0134,0.9691,0.0309,0.0000
6,tih_rna_sample_00061_23KKJ7LT4_1,CGGCATATAC-ATGAGCTGGA,95977130,94327956,1649174,0,0.0227,0.9828,0.0172,0.0000
6,tih_rna_sample_00223_23KKJ7LT4_1,CACGAGTGTC-TAGGCTAGAG,104051371,102567339,1484032,0,0.0246,0.9857,0.0143,0.0000
6,tih_rna_sample_00063_23KKJ7LT4_1,CGGAGACTAT-ATGCTTCTAC,109654973,107472123,2182850,0,0.0259,0.9801,0.0199,0.0000
6,tih_rna_sample_00064_23KKJ7LT4_1,AAGGTGTTAG-TGTGCTGGTG,137751926,135205444,2546482,0,0.0326,0.9815,0.0185,0.0000
6,FFPE_HD789_02_RNA_0006_23KKJ7LT4_1,GCGATGGAAG-GCCGCAAGAT,137876561,135516228,2360333,0,0.0326,0.9829,0.0171,0.0000
6,tih_rna_sample_00224_23KKJ7LT4_1,ACGGTCGCAT-GTACTCTCTA,81989278,80677927,1311351,0,0.0194,0.9840,0.0160,0.0000
6,tih_rna_sample_00225_23KKJ7LT4_1,TTACACACGG-AACTCCGAGA,116006505,114147623,1858882,0,0.0274,0.9840,0.0160,0.0000
6,tih_rna_sample_00066_23KKJ7LT4_1,CGAGATTAGA-CTAATCGCGG,83885974,82114846,1771128,0,0.0198,0.9789,0.0211,0.0000
6,tih_rna_sample_00226_23KKJ7LT4_1,CAAGGATCGA-GCAGACACAA,79510540,78197625,1312915,0,0.0188,0.9835,0.0165,0.0000
6,tih_rna_sample_00068_23KKJ7LT4_1,ACAACACACA-CATCGGCACT,85373790,84033192,1340598,0,0.0202,0.9843,0.0157,0.0000
6,tih_rna_sample_00239_23KKJ7LT4_1,AAGAGCTCGC-CCAATAGATC,70917229,69782839,1134390,0,0.0168,0.9840,0.0160,0.0000
6,tih_rna_sample_00070_23KKJ7LT4_1,ACAGAGGCGT-GACATATCGG,94683787,93108045,1575742,0,0.0224,0.9834,0.0166,0.0000
6,tih_rna_sample_00071_23KKJ7LT4_1,AACTGTACGG-CTCCAATATG,105244449,103344271,1900178,0,0.0249,0.9819,0.0181,0.0000
6,tih_rna_sample_00072_23KKJ7LT4_1,GCGAAGTAGG-ACCATTGTGT,112411725,110681727,1729998,0,0.0266,0.9846,0.0154,0.0000
6,tih_rna_sample_00073_23KKJ7LT4_1,GTGAAGACAC-TGGCTTGATC,68109212,67073166,1036046,0,0.0161,0.9848,0.0152,0.0000
6,tih_rna_sample_00074_23KKJ7LT4_1,GACTTAGGTC-CTATGGACTT,146675817,144650490,2025327,0,0.0347,0.9862,0.0138,0.0000
6,tih_rna_sample_00243_23KKJ7LT4_1,AGGACGGACA-GAAGTCGTGG,84663159,82945636,1717523,0,0.0200,0.9797,0.0203,0.0000
6,tih_rna_sample_00244_23KKJ7LT4_1,CCTATGTGTA-TAGTGAGTCG,105216630,103518049,1698581,0,0.0249,0.9839,0.0161,0.0000
6,tih_rna_sample_00077_23KKJ7LT4_1,CAACGTTGAC-TTGGACGGAA,80706860,79242500,1464360,0,0.0191,0.9819,0.0181,0.0000
6,tih_rna_sample_00078_23KKJ7LT4_1,TGACATAGGT-TACCAGAGAT,108264888,106717391,1547497,0,0.0256,0.9857,0.0143,0.0000
6,tih_rna_sample_00079_23KKJ7LT4_1,TTACACCAAC-ATGAGTTAGG,58236668,57283574,953094,0,0.0138,0.9836,0.0164,0.0000
6,tih_rna_sample_00080_23KKJ7LT4_1,CCTGGAATTA-CGTCATCGAA,62969329,61429925,1539404,0,0.0149,0.9756,0.0244,0.0000
6,tih_rna_sample_00081_23KKJ7LT4_1,GCAACATCAA-TGACCTAGTT,89267018,87624020,1642998,0,0.0211,0.9816,0.0184,0.0000
6,tih_rna_sample_00082_23KKJ7LT4_1,ACAGCCAGGT-TCATGGTACT,94542961,92988621,1554340,0,0.0224,0.9836,0.0164,0.0000
6,tih_rna_sample_00083_23KKJ7LT4_1,TAGTCCATCT-GACAGGACAG,82253451,80870848,1382603,0,0.0194,0.9832,0.0168,0.0000
6,tih_rna_sample_00084_23KKJ7LT4_1,GCCTCTCAGA-CGTGACGACT,44146864,43322917,823947,0,0.0104,0.9813,0.0187,0.0000
6,tih_rna_sample_00245_23KKJ7LT4_1,TAGGTTCAAG-ACTTACCGGC,128903160,126993085,1910075,0,0.0305,0.9852,0.0148,0.0000
6,tih_rna_sample_00086_23KKJ7LT4_1,AAGACTCTCG-GCTCTCCTTC,100380110,98487996,1892114,0,0.0237,0.9812,0.0188,0.0000
6,tih_rna_sample_00247_23KKJ7LT4_1,GAAGATCGAC-AGTGACCACG,55821575,54910347,911228,0,0.0132,0.9837,0.0163,0.0000
6,Undetermined,,224448301,224448301,0,0,0.0531,1.0000,0.0000,0.0000