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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp06_07-73d51683
Published
Jun 07, 2026 11:58 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
3 tih_rna_sample_00001_23KKJ7LT4_1 TTGGATTGTC CGGCTGTTAG 1 11798295608 11343669274 462035030191 39.16 0.96
3 tih_rna_sample_00001_23KKJ7LT4_1 TTGGATTGTC CGGCTGTTAG 2 11798295608 11248459723 460128181780 39.00 0.95
3 tih_rna_sample_00002_23KKJ7LT4_1 AATTGGCACA CAGTCGGAGT 1 11458664143 11008973327 448615770866 39.15 0.96
3 tih_rna_sample_00002_23KKJ7LT4_1 AATTGGCACA CAGTCGGAGT 2 11458664143 10950643357 447510193684 39.05 0.96
3 NTC_0001_0001_23KKJ7LT4_1 AGGCAATCGC ATGAGTCTGT 1 240715442 163493845 7929270874 32.94 0.68
3 NTC_0001_0001_23KKJ7LT4_1 AGGCAATCGC ATGAGTCTGT 2 240715442 210855071 9058968563 37.63 0.88
3 tih_rna_sample_00004_23KKJ7LT4_1 TGCAACACTA CGTTCTGGTA 1 17764706966 17124727233 696799211823 39.22 0.96
3 tih_rna_sample_00004_23KKJ7LT4_1 TGCAACACTA CGTTCTGGTA 2 17764706966 16993702371 694204052463 39.08 0.96
3 tih_rna_sample_00005_23KKJ7LT4_1 GAATCGCCTG CATTGACGGC 1 7638930544 7088544116 293372093969 38.40 0.93
3 tih_rna_sample_00005_23KKJ7LT4_1 GAATCGCCTG CATTGACGGC 2 7638930544 7102942695 294036212955 38.49 0.93
3 tih_rna_sample_00006_23KKJ7LT4_1 TCGCATGACA TTGGCCAATG 1 13064807504 12413704742 508160329268 38.90 0.95
3 tih_rna_sample_00006_23KKJ7LT4_1 TCGCATGACA TTGGCCAATG 2 13064807504 12318942018 506666654553 38.78 0.94
3 tih_rna_sample_00007_23KKJ7LT4_1 TCAATACGTG GCTGCTAATA 1 13896577565 13301430046 542977650613 39.07 0.96
3 tih_rna_sample_00007_23KKJ7LT4_1 TCAATACGTG GCTGCTAATA 2 13896577565 13221432925 541427622781 38.96 0.95
3 tih_rna_sample_00008_23KKJ7LT4_1 ATTCTCCACG TCGATGATCG 1 2946888065 2618592268 110601078643 37.53 0.89
3 tih_rna_sample_00008_23KKJ7LT4_1 ATTCTCCACG TCGATGATCG 2 2946888065 2717237156 113009137682 38.35 0.92
3 tih_rna_sample_00009_23KKJ7LT4_1 TGTTACAGAG TGTGTACCAG 1 15367464639 14545585163 596622377075 38.82 0.95
3 tih_rna_sample_00009_23KKJ7LT4_1 TGTTACAGAG TGTGTACCAG 2 15367464639 14389994365 593541497635 38.62 0.94
3 tih_rna_sample_00010_23KKJ7LT4_1 TTACGGACGC ATTGGCCAGC 1 15712074876 15141312638 616325430713 39.23 0.96
3 tih_rna_sample_00010_23KKJ7LT4_1 TTACGGACGC ATTGGCCAGC 2 15712074876 14941802370 612113215800 38.96 0.95
3 tih_rna_sample_00170_23KKJ7LT4_1 CCAATGTTGA CTTGAATGTC 1 10906638041 10255894142 421625371124 38.66 0.94
3 tih_rna_sample_00170_23KKJ7LT4_1 CCAATGTTGA CTTGAATGTC 2 10906638041 10308988822 423608542375 38.84 0.95
3 tih_rna_sample_00012_23KKJ7LT4_1 CGTACTTAGA CCGATGTTCA 1 13842238252 13145246832 538376154030 38.89 0.95
3 tih_rna_sample_00012_23KKJ7LT4_1 CGTACTTAGA CCGATGTTCA 2 13842238252 13132374608 538563804215 38.91 0.95
3 tih_rna_sample_00013_23KKJ7LT4_1 GCCGTGAACA GCACCACCAT 1 8844168452 8402320030 344019019552 38.90 0.95
3 tih_rna_sample_00013_23KKJ7LT4_1 GCCGTGAACA GCACCACCAT 2 8844168452 8347441201 343070310622 38.79 0.94
3 tih_rna_sample_00176_23KKJ7LT4_1 AGGAGACCAC TACCACGTAG 1 9996942165 9329535100 385127049988 38.52 0.93
3 tih_rna_sample_00176_23KKJ7LT4_1 AGGAGACCAC TACCACGTAG 2 9996942165 9292871797 384642546157 38.48 0.93
3 tih_rna_sample_00015_23KKJ7LT4_1 GAAGCAAGCG TCACCGACTA 1 16727633077 16126966815 656378773032 39.24 0.96
3 tih_rna_sample_00015_23KKJ7LT4_1 GAAGCAAGCG TCACCGACTA 2 16727633077 15958036908 652809785058 39.03 0.95
3 tih_rna_sample_00016_23KKJ7LT4_1 AACGCGACTG GACCTACGAG 1 8596102028 8001135927 330658737819 38.47 0.93
3 tih_rna_sample_00016_23KKJ7LT4_1 AACGCGACTG GACCTACGAG 2 8596102028 8015615238 331336326432 38.54 0.93
3 tih_rna_sample_00206_23KKJ7LT4_1 TTCGCGGACT AGAGAGTGGT 1 16402529322 15896147958 645469844310 39.35 0.97
3 tih_rna_sample_00206_23KKJ7LT4_1 TTCGCGGACT AGAGAGTGGT 2 16402529322 15558746102 637520323982 38.87 0.95
3 FFPE_HD789_02_RNA_0005_23KKJ7LT4_1 TCGTGACGAC GTGACTAACT 1 20007175501 19454830962 788976266070 39.43 0.97
3 FFPE_HD789_02_RNA_0005_23KKJ7LT4_1 TCGTGACGAC GTGACTAACT 2 20007175501 19191124180 783078568627 39.14 0.96
3 tih_rna_sample_00179_23KKJ7LT4_1 TCAATCTAGC TCCGAATAAG 1 13987387908 13286950755 543969311007 38.89 0.95
3 tih_rna_sample_00179_23KKJ7LT4_1 TCAATCTAGC TCCGAATAAG 2 13987387908 13219915185 542965116387 38.82 0.95
3 tih_rna_sample_00020_23KKJ7LT4_1 GCGGAGTCAA CTCTATAGCT 1 14221242212 13527656629 553742786839 38.94 0.95
3 tih_rna_sample_00020_23KKJ7LT4_1 GCGGAGTCAA CTCTATAGCT 2 14221242212 13457587865 552514704002 38.85 0.95
3 tih_rna_sample_00021_23KKJ7LT4_1 GATGCTAGAA TGGATGCCAG 1 13405907746 12958976975 526701575000 39.29 0.97
3 tih_rna_sample_00021_23KKJ7LT4_1 GATGCTAGAA TGGATGCCAG 2 13405907746 12824581987 523872884947 39.08 0.96
3 tih_rna_sample_00022_23KKJ7LT4_1 ACGATGGTTA AATTGCTAGG 1 15294910196 14585621658 596246421192 38.98 0.95
3 tih_rna_sample_00022_23KKJ7LT4_1 ACGATGGTTA AATTGCTAGG 2 15294910196 14465480414 594004149407 38.84 0.95
3 tih_rna_sample_00023_23KKJ7LT4_1 AGAGCAGTAT CAAGAGGAGG 1 17297064194 16769942090 681066083891 39.37 0.97
3 tih_rna_sample_00023_23KKJ7LT4_1 AGAGCAGTAT CAAGAGGAGG 2 17297064194 16562539074 676345359132 39.10 0.96
3 tih_rna_sample_00180_23KKJ7LT4_1 TTGTGATCCT ATGAAGGCAT 1 17666291810 16800798258 687782214198 38.93 0.95
3 tih_rna_sample_00180_23KKJ7LT4_1 TTGTGATCCT ATGAAGGCAT 2 17666291810 16589756307 683363489322 38.68 0.94
3 tih_rna_sample_00234_23KKJ7LT4_1 CCACCTGCTT TGTTACCGTC 1 14834448833 14165582658 578782624281 39.02 0.95
3 tih_rna_sample_00234_23KKJ7LT4_1 CCACCTGCTT TGTTACCGTC 2 14834448833 13801473265 570093217672 38.43 0.93
3 tih_rna_sample_00030_23KKJ7LT4_1 TGGTGGTTGT TACCTGTCAA 1 19647631062 19020605028 772930012344 39.34 0.97
3 tih_rna_sample_00030_23KKJ7LT4_1 TGGTGGTTGT TACCTGTCAA 2 19647631062 18788877823 767619653317 39.07 0.96
3 tih_rna_sample_00198_23KKJ7LT4_1 ACGCAACACA CATTCAGGAG 1 9419386191 8844256537 364100012389 38.65 0.94
3 tih_rna_sample_00198_23KKJ7LT4_1 ACGCAACACA CATTCAGGAG 2 9419386191 8874482002 365143580764 38.77 0.94
3 tih_rna_sample_00032_23KKJ7LT4_1 CCAGTGCACT CCTCCGTATC 1 16980823837 16371530837 666174892880 39.23 0.96
3 tih_rna_sample_00032_23KKJ7LT4_1 CCAGTGCACT CCTCCGTATC 2 16980823837 16236204576 663310843209 39.06 0.96
3 tih_rna_sample_00200_23KKJ7LT4_1 CATCAGGCGT CGTGTTACCG 1 4188327619 3910273372 161515982221 38.56 0.93
3 tih_rna_sample_00200_23KKJ7LT4_1 CATCAGGCGT CGTGTTACCG 2 4188327619 3858876673 160359078430 38.29 0.92
3 FFPE_V4_0001_RNA_0003_23KKJ7LT4_1 ATCCTAGAAC TGAAGTCTGC 1 12715080934 12326298765 500523663459 39.36 0.97
3 FFPE_V4_0001_RNA_0003_23KKJ7LT4_1 ATCCTAGAAC TGAAGTCTGC 2 12715080934 12165076587 496897740651 39.08 0.96
3 tih_rna_sample_00034_23KKJ7LT4_1 GCCTAGAGTC ATGGTTCTCT 1 10693445520 9994363404 412187069118 38.55 0.93
3 tih_rna_sample_00034_23KKJ7LT4_1 GCCTAGAGTC ATGGTTCTCT 2 10693445520 9876020751 409843507758 38.33 0.92
3 tih_rna_sample_00035_23KKJ7LT4_1 CTTACTCTCT CTGCTTAAGG 1 11628847183 11060622573 452790385581 38.94 0.95
3 tih_rna_sample_00035_23KKJ7LT4_1 CTTACTCTCT CTGCTTAAGG 2 11628847183 11011798010 451985499920 38.87 0.95
3 tih_rna_sample_00036_23KKJ7LT4_1 CCGACAACCT TTCTACCTGT 1 8932846524 8357202418 344519805271 38.57 0.94
3 tih_rna_sample_00036_23KKJ7LT4_1 CCGACAACCT TTCTACCTGT 2 8932846524 8365216505 345128992925 38.64 0.94
3 tih_rna_sample_00037_23KKJ7LT4_1 GATCTGTATG ATCGAAGAGC 1 24594096461 23634534976 962905104619 39.15 0.96
3 tih_rna_sample_00037_23KKJ7LT4_1 GATCTGTATG ATCGAAGAGC 2 24594096461 23516193096 960946492980 39.07 0.96
3 tih_rna_sample_00202_23KKJ7LT4_1 ATAGGCAGTG CAGAACTTAG 1 19221742357 18399473319 751081773948 39.07 0.96
3 tih_rna_sample_00202_23KKJ7LT4_1 ATAGGCAGTG CAGAACTTAG 2 19221742357 18374329639 750902878714 39.07 0.96
3 tih_rna_sample_00039_23KKJ7LT4_1 GAATAGAGTG CACAGCGTCT 1 15643057759 14905386423 609725035521 38.98 0.95
3 tih_rna_sample_00039_23KKJ7LT4_1 GAATAGAGTG CACAGCGTCT 2 15643057759 14849462571 608832842601 38.92 0.95
3 tih_rna_sample_00204_23KKJ7LT4_1 GTAACAGGAA TGTCTTCAGA 1 657152151 489213083 22570686467 34.35 0.74
3 tih_rna_sample_00204_23KKJ7LT4_1 GTAACAGGAA TGTCTTCAGA 2 657152151 571263142 24584751052 37.41 0.87
3 tih_rna_sample_00041_23KKJ7LT4_1 ATGGTTGTTG AGTTATGAGG 1 13960901300 13310597025 544097554086 38.97 0.95
3 tih_rna_sample_00041_23KKJ7LT4_1 ATGGTTGTTG AGTTATGAGG 2 13960901300 13245952609 543151179235 38.91 0.95
3 tih_rna_sample_00042_23KKJ7LT4_1 ACAATAGCAC GTATGCCTAT 1 10690853605 10189639043 416682213818 38.98 0.95
3 tih_rna_sample_00042_23KKJ7LT4_1 ACAATAGCAC GTATGCCTAT 2 10690853605 10123247656 415466224639 38.86 0.95
3 tih_rna_sample_00043_23KKJ7LT4_1 CTACAAGTTC GCACCATGAA 1 14228796138 13546437333 554188893336 38.95 0.95
3 tih_rna_sample_00043_23KKJ7LT4_1 CTACAAGTTC GCACCATGAA 2 14228796138 13509753014 553871327186 38.93 0.95
3 tih_rna_sample_00024_23KKJ7LT4_1 TAAGATCGGA TTCATCCGTG 1 12432651591 11700304435 481143356563 38.70 0.94
3 tih_rna_sample_00024_23KKJ7LT4_1 TAAGATCGGA TTCATCCGTG 2 12432651591 11684147336 481256994134 38.71 0.94
3 tih_rna_sample_00183_23KKJ7LT4_1 TTAGTTGCTG ATGGCGGATT 1 11525376698 10849188215 446006339036 38.70 0.94
3 tih_rna_sample_00183_23KKJ7LT4_1 TTAGTTGCTG ATGGCGGATT 2 11525376698 10868674939 446979776320 38.78 0.94
3 tih_rna_sample_00025_23KKJ7LT4_1 AGTCAGATGC CTCACACACT 1 12732089272 12077523228 494900602305 38.87 0.95
3 tih_rna_sample_00025_23KKJ7LT4_1 AGTCAGATGC CTCACACACT 2 12732089272 12087216115 495635518933 38.93 0.95
3 tih_rna_sample_00184_23KKJ7LT4_1 AGTACAACTG CATTGAGTTC 1 18385284048 17541637143 716966400771 39.00 0.95
3 tih_rna_sample_00184_23KKJ7LT4_1 AGTACAACTG CATTGAGTTC 2 18385284048 17426775034 714962937046 38.89 0.95
3 tih_rna_sample_00027_23KKJ7LT4_1 CTTAGTACGC GCTACAACGA 1 12062225186 11507272274 470377137614 39.00 0.95
3 tih_rna_sample_00027_23KKJ7LT4_1 CTTAGTACGC GCTACAACGA 2 12062225186 11481551824 470146550521 38.98 0.95
3 tih_rna_sample_00185_23KKJ7LT4_1 GTACGCATCG GAGTTGTTCA 1 11057922223 10435991255 428667532478 38.77 0.94
3 tih_rna_sample_00185_23KKJ7LT4_1 GTACGCATCG GAGTTGTTCA 2 11057922223 10469706285 429803608932 38.87 0.95
3 tih_rna_sample_00186_23KKJ7LT4_1 ACTTCCGTTC CAATTCCGTG 1 17384942721 16776142943 682381577546 39.25 0.96
3 tih_rna_sample_00186_23KKJ7LT4_1 ACTTCCGTTC CAATTCCGTG 2 17384942721 16632177583 679408831921 39.08 0.96
3 tih_rna_sample_00207_23KKJ7LT4_1 AACCTGATCT ATTCCGTCCG 1 11992170548 11456817781 468115459633 39.04 0.96
3 tih_rna_sample_00207_23KKJ7LT4_1 AACCTGATCT ATTCCGTCCG 2 11992170548 11336506856 465731591786 38.84 0.95
3 Undetermined 1 31584524738 26251106856 1144550003853 36.24 0.83
3 Undetermined 2 31584524738 25737665837 1126875552080 35.68 0.81
99 rows