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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L001/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp06_07-73d51683
Published
Jun 07, 2026 11:59 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
1 tih_rna_sample_00001_23KKJ7LT4_1 TTGGATTGTC CGGCTGTTAG 1 11739259440 11308873005 460236837630 39.20 0.96
1 tih_rna_sample_00001_23KKJ7LT4_1 TTGGATTGTC CGGCTGTTAG 2 11739259440 11229869817 458732322015 39.08 0.96
1 tih_rna_sample_00002_23KKJ7LT4_1 AATTGGCACA CAGTCGGAGT 1 11452735430 11027087561 448962017981 39.20 0.96
1 tih_rna_sample_00002_23KKJ7LT4_1 AATTGGCACA CAGTCGGAGT 2 11452735430 10983485670 448201208724 39.13 0.96
1 NTC_0001_0001_23KKJ7LT4_1 AGGCAATCGC ATGAGTCTGT 1 237898537 161253931 7828122760 32.91 0.68
1 NTC_0001_0001_23KKJ7LT4_1 AGGCAATCGC ATGAGTCTGT 2 237898537 211163968 9011076886 37.88 0.89
1 tih_rna_sample_00004_23KKJ7LT4_1 TGCAACACTA CGTTCTGGTA 1 17849555678 17240608118 700943813189 39.27 0.97
1 tih_rna_sample_00004_23KKJ7LT4_1 TGCAACACTA CGTTCTGGTA 2 17849555678 17135345276 698959062497 39.16 0.96
1 tih_rna_sample_00005_23KKJ7LT4_1 GAATCGCCTG CATTGACGGC 1 7616177562 7083726414 292889824146 38.46 0.93
1 tih_rna_sample_00005_23KKJ7LT4_1 GAATCGCCTG CATTGACGGC 2 7616177562 7113652070 293933290994 38.59 0.93
1 tih_rna_sample_00006_23KKJ7LT4_1 TCGCATGACA TTGGCCAATG 1 13118019149 12491082502 510895021576 38.95 0.95
1 tih_rna_sample_00006_23KKJ7LT4_1 TCGCATGACA TTGGCCAATG 2 13118019149 12419024804 509938006898 38.87 0.95
1 tih_rna_sample_00007_23KKJ7LT4_1 TCAATACGTG GCTGCTAATA 1 13875986752 13308910475 542838497558 39.12 0.96
1 tih_rna_sample_00007_23KKJ7LT4_1 TCAATACGTG GCTGCTAATA 2 13875986752 13249970818 541769136799 39.04 0.95
1 tih_rna_sample_00008_23KKJ7LT4_1 ATTCTCCACG TCGATGATCG 1 2921463893 2605417364 109886942459 37.61 0.89
1 tih_rna_sample_00008_23KKJ7LT4_1 ATTCTCCACG TCGATGATCG 2 2921463893 2706926092 112348300936 38.46 0.93
1 tih_rna_sample_00009_23KKJ7LT4_1 TGTTACAGAG TGTGTACCAG 1 15299901652 14506943867 594625310876 38.86 0.95
1 tih_rna_sample_00009_23KKJ7LT4_1 TGTTACAGAG TGTGTACCAG 2 15299901652 14376674902 592154143468 38.70 0.94
1 tih_rna_sample_00010_23KKJ7LT4_1 TTACGGACGC ATTGGCCAGC 1 15781793690 15230639328 619526601810 39.26 0.97
1 tih_rna_sample_00010_23KKJ7LT4_1 TTACGGACGC ATTGGCCAGC 2 15781793690 15067450709 616253630468 39.05 0.95
1 tih_rna_sample_00170_23KKJ7LT4_1 CCAATGTTGA CTTGAATGTC 1 10949974286 10317601509 423809587152 38.70 0.94
1 tih_rna_sample_00170_23KKJ7LT4_1 CCAATGTTGA CTTGAATGTC 2 10949974286 10391182098 426312175620 38.93 0.95
1 tih_rna_sample_00012_23KKJ7LT4_1 CGTACTTAGA CCGATGTTCA 1 13875382903 13205843545 540399182662 38.95 0.95
1 tih_rna_sample_00012_23KKJ7LT4_1 CGTACTTAGA CCGATGTTCA 2 13875382903 13213271260 541042738291 38.99 0.95
1 tih_rna_sample_00013_23KKJ7LT4_1 GCCGTGAACA GCACCACCAT 1 8867973753 8442517381 345370446241 38.95 0.95
1 tih_rna_sample_00013_23KKJ7LT4_1 GCCGTGAACA GCACCACCAT 2 8867973753 8404146901 344809274746 38.88 0.95
1 tih_rna_sample_00176_23KKJ7LT4_1 AGGAGACCAC TACCACGTAG 1 9946355806 9297547076 383516015846 38.56 0.93
1 tih_rna_sample_00176_23KKJ7LT4_1 AGGAGACCAC TACCACGTAG 2 9946355806 9286291870 383655385681 38.57 0.93
1 tih_rna_sample_00015_23KKJ7LT4_1 GAAGCAAGCG TCACCGACTA 1 16803713672 16235976790 660197587285 39.29 0.97
1 tih_rna_sample_00015_23KKJ7LT4_1 GAAGCAAGCG TCACCGACTA 2 16803713672 16090509190 657181520449 39.11 0.96
1 tih_rna_sample_00016_23KKJ7LT4_1 AACGCGACTG GACCTACGAG 1 8590093436 8014545060 330888747267 38.52 0.93
1 tih_rna_sample_00016_23KKJ7LT4_1 AACGCGACTG GACCTACGAG 2 8590093436 8043609380 331912512692 38.64 0.94
1 tih_rna_sample_00206_23KKJ7LT4_1 TTCGCGGACT AGAGAGTGGT 1 16494287945 16009126888 649605591763 39.38 0.97
1 tih_rna_sample_00206_23KKJ7LT4_1 TTCGCGGACT AGAGAGTGGT 2 16494287945 15700532532 642387097182 38.95 0.95
1 FFPE_HD789_02_RNA_0005_23KKJ7LT4_1 TCGTGACGAC GTGACTAACT 1 20148805800 19625034867 795252000408 39.47 0.97
1 FFPE_HD789_02_RNA_0005_23KKJ7LT4_1 TCGTGACGAC GTGACTAACT 2 20148805800 19399484460 790293744006 39.22 0.96
1 tih_rna_sample_00179_23KKJ7LT4_1 TCAATCTAGC TCCGAATAAG 1 13998747940 13321254510 544970488167 38.93 0.95
1 tih_rna_sample_00179_23KKJ7LT4_1 TCAATCTAGC TCCGAATAAG 2 13998747940 13279792437 544586876772 38.90 0.95
1 tih_rna_sample_00020_23KKJ7LT4_1 GCGGAGTCAA CTCTATAGCT 1 14194416156 13532696962 553456350337 38.99 0.95
1 tih_rna_sample_00020_23KKJ7LT4_1 GCGGAGTCAA CTCTATAGCT 2 14194416156 13482941845 552691599367 38.94 0.95
1 tih_rna_sample_00021_23KKJ7LT4_1 GATGCTAGAA TGGATGCCAG 1 13442539138 13018626358 528700291282 39.33 0.97
1 tih_rna_sample_00021_23KKJ7LT4_1 GATGCTAGAA TGGATGCCAG 2 13442539138 12904225152 526353864165 39.16 0.96
1 tih_rna_sample_00022_23KKJ7LT4_1 ACGATGGTTA AATTGCTAGG 1 15272585752 14587345958 595926849116 39.02 0.96
1 tih_rna_sample_00022_23KKJ7LT4_1 ACGATGGTTA AATTGCTAGG 2 15272585752 14498872938 594447538323 38.92 0.95
1 tih_rna_sample_00023_23KKJ7LT4_1 AGAGCAGTAT CAAGAGGAGG 1 17194498652 16686646552 677393894668 39.40 0.97
1 tih_rna_sample_00023_23KKJ7LT4_1 AGAGCAGTAT CAAGAGGAGG 2 17194498652 16516693068 673589511126 39.17 0.96
1 tih_rna_sample_00180_23KKJ7LT4_1 TTGTGATCCT ATGAAGGCAT 1 17658208629 16818146389 688016740933 38.96 0.95
1 tih_rna_sample_00180_23KKJ7LT4_1 TTGTGATCCT ATGAAGGCAT 2 17658208629 16649765589 684683907471 38.77 0.94
1 tih_rna_sample_00234_23KKJ7LT4_1 CCACCTGCTT TGTTACCGTC 1 14914336893 14264690014 582408591940 39.05 0.96
1 tih_rna_sample_00234_23KKJ7LT4_1 CCACCTGCTT TGTTACCGTC 2 14914336893 13926390172 574399804105 38.51 0.93
1 tih_rna_sample_00030_23KKJ7LT4_1 TGGTGGTTGT TACCTGTCAA 1 19600713097 18996685220 771545235200 39.36 0.97
1 tih_rna_sample_00030_23KKJ7LT4_1 TGGTGGTTGT TACCTGTCAA 2 19600713097 18806533531 767296059802 39.15 0.96
1 tih_rna_sample_00198_23KKJ7LT4_1 ACGCAACACA CATTCAGGAG 1 9433161619 8878023735 365169592515 38.71 0.94
1 tih_rna_sample_00198_23KKJ7LT4_1 ACGCAACACA CATTCAGGAG 2 9433161619 8923584881 366558450122 38.86 0.95
1 tih_rna_sample_00032_23KKJ7LT4_1 CCAGTGCACT CCTCCGTATC 1 16861527344 16284460898 662110982786 39.27 0.97
1 tih_rna_sample_00032_23KKJ7LT4_1 CCAGTGCACT CCTCCGTATC 2 16861527344 16172525971 659868451345 39.13 0.96
1 tih_rna_sample_00200_23KKJ7LT4_1 CATCAGGCGT CGTGTTACCG 1 4144030712 3872757140 159883939751 38.58 0.93
1 tih_rna_sample_00200_23KKJ7LT4_1 CATCAGGCGT CGTGTTACCG 2 4144030712 3836870284 159115286083 38.40 0.93
1 FFPE_V4_0001_RNA_0003_23KKJ7LT4_1 ATCCTAGAAC TGAAGTCTGC 1 12835061457 12458978991 505595202876 39.39 0.97
1 FFPE_V4_0001_RNA_0003_23KKJ7LT4_1 ATCCTAGAAC TGAAGTCTGC 2 12835061457 12322947954 502601272911 39.16 0.96
1 tih_rna_sample_00034_23KKJ7LT4_1 GCCTAGAGTC ATGGTTCTCT 1 10654577063 9979751921 411215852474 38.60 0.94
1 tih_rna_sample_00034_23KKJ7LT4_1 GCCTAGAGTC ATGGTTCTCT 2 10654577063 9884242197 409417747173 38.43 0.93
1 tih_rna_sample_00035_23KKJ7LT4_1 CTTACTCTCT CTGCTTAAGG 1 11574218856 11023037847 450969286143 38.96 0.95
1 tih_rna_sample_00035_23KKJ7LT4_1 CTTACTCTCT CTGCTTAAGG 2 11574218856 11000510634 450843001908 38.95 0.95
1 tih_rna_sample_00036_23KKJ7LT4_1 CCGACAACCT TTCTACCTGT 1 8878767384 8320101139 342741334717 38.60 0.94
1 tih_rna_sample_00036_23KKJ7LT4_1 CCGACAACCT TTCTACCTGT 2 8878767384 8347742836 343846132717 38.73 0.94
1 tih_rna_sample_00037_23KKJ7LT4_1 GATCTGTATG ATCGAAGAGC 1 24656263161 23737378861 966380400463 39.19 0.96
1 tih_rna_sample_00037_23KKJ7LT4_1 GATCTGTATG ATCGAAGAGC 2 24656263161 23658995663 965374002479 39.15 0.96
1 tih_rna_sample_00202_23KKJ7LT4_1 ATAGGCAGTG CAGAACTTAG 1 19208550242 18425156045 751511832905 39.12 0.96
1 tih_rna_sample_00202_23KKJ7LT4_1 ATAGGCAGTG CAGAACTTAG 2 19208550242 18424237204 751893308686 39.14 0.96
1 tih_rna_sample_00039_23KKJ7LT4_1 GAATAGAGTG CACAGCGTCT 1 15687281280 14979699389 612256949330 39.03 0.95
1 tih_rna_sample_00039_23KKJ7LT4_1 GAATAGAGTG CACAGCGTCT 2 15687281280 14944722053 611834285852 39.00 0.95
1 tih_rna_sample_00204_23KKJ7LT4_1 GTAACAGGAA TGTCTTCAGA 1 648757004 484026632 22308031214 34.39 0.75
1 tih_rna_sample_00204_23KKJ7LT4_1 GTAACAGGAA TGTCTTCAGA 2 648757004 573599229 24466882926 37.71 0.88
1 tih_rna_sample_00041_23KKJ7LT4_1 ATGGTTGTTG AGTTATGAGG 1 13978295594 13351549510 545363435743 39.02 0.96
1 tih_rna_sample_00041_23KKJ7LT4_1 ATGGTTGTTG AGTTATGAGG 2 13978295594 13311213340 545014955479 38.99 0.95
1 tih_rna_sample_00042_23KKJ7LT4_1 ACAATAGCAC GTATGCCTAT 1 10718067127 10230863275 418059127144 39.01 0.95
1 tih_rna_sample_00042_23KKJ7LT4_1 ACAATAGCAC GTATGCCTAT 2 10718067127 10187344645 417452558245 38.95 0.95
1 tih_rna_sample_00043_23KKJ7LT4_1 CTACAAGTTC GCACCATGAA 1 14239349226 13579970152 555131149252 38.99 0.95
1 tih_rna_sample_00043_23KKJ7LT4_1 CTACAAGTTC GCACCATGAA 2 14239349226 13572058944 555539901708 39.01 0.95
1 tih_rna_sample_00024_23KKJ7LT4_1 TAAGATCGGA TTCATCCGTG 1 12402968464 11698340128 480661716460 38.75 0.94
1 tih_rna_sample_00024_23KKJ7LT4_1 TAAGATCGGA TTCATCCGTG 2 12402968464 11704327156 481263925465 38.80 0.94
1 tih_rna_sample_00183_23KKJ7LT4_1 TTAGTTGCTG ATGGCGGATT 1 11534038662 10881071790 446920192746 38.75 0.94
1 tih_rna_sample_00183_23KKJ7LT4_1 TTAGTTGCTG ATGGCGGATT 2 11534038662 10920116710 448356960949 38.87 0.95
1 tih_rna_sample_00025_23KKJ7LT4_1 AGTCAGATGC CTCACACACT 1 12748371904 12110029326 495877049079 38.90 0.95
1 tih_rna_sample_00025_23KKJ7LT4_1 AGTCAGATGC CTCACACACT 2 12748371904 12147181386 497340848928 39.01 0.95
1 tih_rna_sample_00184_23KKJ7LT4_1 AGTACAACTG CATTGAGTTC 1 18385818135 17576454705 717832698393 39.04 0.96
1 tih_rna_sample_00184_23KKJ7LT4_1 AGTACAACTG CATTGAGTTC 2 18385818135 17491509454 716535073744 38.97 0.95
1 tih_rna_sample_00027_23KKJ7LT4_1 CTTAGTACGC GCTACAACGA 1 12148696544 11610177014 474202423184 39.03 0.96
1 tih_rna_sample_00027_23KKJ7LT4_1 CTTAGTACGC GCTACAACGA 2 12148696544 11606972178 474554114241 39.06 0.96
1 tih_rna_sample_00185_23KKJ7LT4_1 GTACGCATCG GAGTTGTTCA 1 11068996714 10470498044 429703478300 38.82 0.95
1 tih_rna_sample_00185_23KKJ7LT4_1 GTACGCATCG GAGTTGTTCA 2 11068996714 10520784004 431219543119 38.96 0.95
1 tih_rna_sample_00186_23KKJ7LT4_1 ACTTCCGTTC CAATTCCGTG 1 17399678358 16818091858 683578225300 39.29 0.97
1 tih_rna_sample_00186_23KKJ7LT4_1 ACTTCCGTTC CAATTCCGTG 2 17399678358 16704671253 681377772570 39.16 0.96
1 tih_rna_sample_00207_23KKJ7LT4_1 AACCTGATCT ATTCCGTCCG 1 11998978987 11478750049 468709438990 39.06 0.96
1 tih_rna_sample_00207_23KKJ7LT4_1 AACCTGATCT ATTCCGTCCG 2 11998978987 11385436016 467021331746 38.92 0.95
1 Undetermined 1 30450234180 25493645017 1107283209214 36.36 0.84
1 Undetermined 2 30450234180 24797518241 1086717179468 35.69 0.81
99 rows