Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
1,tih_rna_sample_00001_23KKJ7LT4_1,TTGGATTGTC-CGGCTGTTAG,77743440,76572889,1170551,0,0.0180,0.9849,0.0151,0.0000
1,tih_rna_sample_00002_23KKJ7LT4_1,AATTGGCACA-CAGTCGGAGT,75845930,74739194,1106736,0,0.0175,0.9854,0.0146,0.0000
1,NTC_0001_0001_23KKJ7LT4_1,AGGCAATCGC-ATGAGTCTGT,1575487,1554297,21190,0,0.0004,0.9866,0.0134,0.0000
1,tih_rna_sample_00004_23KKJ7LT4_1,TGCAACACTA-CGTTCTGGTA,118208978,116544634,1664344,0,0.0273,0.9859,0.0141,0.0000
1,tih_rna_sample_00005_23KKJ7LT4_1,GAATCGCCTG-CATTGACGGC,50438262,49624495,813767,0,0.0117,0.9839,0.0161,0.0000
1,tih_rna_sample_00006_23KKJ7LT4_1,TCGCATGACA-TTGGCCAATG,86874299,85607849,1266450,0,0.0201,0.9854,0.0146,0.0000
1,tih_rna_sample_00007_23KKJ7LT4_1,TCAATACGTG-GCTGCTAATA,91893952,90577961,1315991,0,0.0212,0.9857,0.0143,0.0000
1,tih_rna_sample_00008_23KKJ7LT4_1,ATTCTCCACG-TCGATGATCG,19347443,19048808,298635,0,0.0045,0.9846,0.0154,0.0000
1,tih_rna_sample_00009_23KKJ7LT4_1,TGTTACAGAG-TGTGTACCAG,101323852,99178421,2145431,0,0.0234,0.9788,0.0212,0.0000
1,tih_rna_sample_00010_23KKJ7LT4_1,TTACGGACGC-ATTGGCCAGC,104515190,103002635,1512555,0,0.0241,0.9855,0.0145,0.0000
1,tih_rna_sample_00170_23KKJ7LT4_1,CCAATGTTGA-CTTGAATGTC,72516386,71691236,825150,0,0.0168,0.9886,0.0114,0.0000
1,tih_rna_sample_00012_23KKJ7LT4_1,CGTACTTAGA-CCGATGTTCA,91889953,90627587,1262366,0,0.0212,0.9863,0.0137,0.0000
1,tih_rna_sample_00013_23KKJ7LT4_1,GCCGTGAACA-GCACCACCAT,58728303,57777172,951131,0,0.0136,0.9838,0.0162,0.0000
1,tih_rna_sample_00176_23KKJ7LT4_1,AGGAGACCAC-TACCACGTAG,65869906,64955118,914788,0,0.0152,0.9861,0.0139,0.0000
1,tih_rna_sample_00015_23KKJ7LT4_1,GAAGCAAGCG-TCACCGACTA,111282872,109512882,1769990,0,0.0257,0.9841,0.0159,0.0000
1,tih_rna_sample_00016_23KKJ7LT4_1,AACGCGACTG-GACCTACGAG,56888036,56066554,821482,0,0.0131,0.9856,0.0144,0.0000
1,tih_rna_sample_00206_23KKJ7LT4_1,TTCGCGGACT-AGAGAGTGGT,109233695,107759198,1474497,0,0.0252,0.9865,0.0135,0.0000
1,FFPE_HD789_02_RNA_0005_23KKJ7LT4_1,TCGTGACGAC-GTGACTAACT,133435800,131658810,1776990,0,0.0308,0.9867,0.0133,0.0000
1,tih_rna_sample_00179_23KKJ7LT4_1,TCAATCTAGC-TCCGAATAAG,92706940,91508343,1198597,0,0.0214,0.9871,0.0129,0.0000
1,tih_rna_sample_00020_23KKJ7LT4_1,GCGGAGTCAA-CTCTATAGCT,94002756,92644750,1358006,0,0.0217,0.9856,0.0144,0.0000
1,tih_rna_sample_00021_23KKJ7LT4_1,GATGCTAGAA-TGGATGCCAG,89023438,87905893,1117545,0,0.0206,0.9874,0.0126,0.0000
1,tih_rna_sample_00022_23KKJ7LT4_1,ACGATGGTTA-AATTGCTAGG,101142952,99655549,1487403,0,0.0234,0.9853,0.0147,0.0000
1,tih_rna_sample_00023_23KKJ7LT4_1,AGAGCAGTAT-CAAGAGGAGG,113870852,112340146,1530706,0,0.0263,0.9866,0.0134,0.0000
1,tih_rna_sample_00180_23KKJ7LT4_1,TTGTGATCCT-ATGAAGGCAT,116941779,115443002,1498777,0,0.0270,0.9872,0.0128,0.0000
1,tih_rna_sample_00234_23KKJ7LT4_1,CCACCTGCTT-TGTTACCGTC,98770443,97063114,1707329,0,0.0228,0.9827,0.0173,0.0000
1,tih_rna_sample_00030_23KKJ7LT4_1,TGGTGGTTGT-TACCTGTCAA,129806047,128089430,1716617,0,0.0300,0.9868,0.0132,0.0000
1,tih_rna_sample_00198_23KKJ7LT4_1,ACGCAACACA-CATTCAGGAG,62471269,61556720,914549,0,0.0144,0.9854,0.0146,0.0000
1,tih_rna_sample_00032_23KKJ7LT4_1,CCAGTGCACT-CCTCCGTATC,111665744,109496928,2168816,0,0.0258,0.9806,0.0194,0.0000
1,tih_rna_sample_00200_23KKJ7LT4_1,CATCAGGCGT-CGTGTTACCG,27443912,26962546,481366,0,0.0063,0.9825,0.0175,0.0000
1,FFPE_V4_0001_RNA_0003_23KKJ7LT4_1,ATCCTAGAAC-TGAAGTCTGC,85000407,83952321,1048086,0,0.0196,0.9877,0.0123,0.0000
1,tih_rna_sample_00034_23KKJ7LT4_1,GCCTAGAGTC-ATGGTTCTCT,70560113,69618193,941920,0,0.0163,0.9867,0.0133,0.0000
1,tih_rna_sample_00035_23KKJ7LT4_1,CTTACTCTCT-CTGCTTAAGG,76650456,75411307,1239149,0,0.0177,0.9838,0.0162,0.0000
1,tih_rna_sample_00036_23KKJ7LT4_1,CCGACAACCT-TTCTACCTGT,58799784,57951402,848382,0,0.0136,0.9856,0.0144,0.0000
1,tih_rna_sample_00037_23KKJ7LT4_1,GATCTGTATG-ATCGAAGAGC,163286511,161099780,2186731,0,0.0377,0.9866,0.0134,0.0000
1,tih_rna_sample_00202_23KKJ7LT4_1,ATAGGCAGTG-CAGAACTTAG,127208942,125744406,1464536,0,0.0294,0.9885,0.0115,0.0000
1,tih_rna_sample_00039_23KKJ7LT4_1,GAATAGAGTG-CACAGCGTCT,103889280,102529880,1359400,0,0.0240,0.9869,0.0131,0.0000
1,tih_rna_sample_00204_23KKJ7LT4_1,GTAACAGGAA-TGTCTTCAGA,4296404,4234701,61703,0,0.0010,0.9856,0.0144,0.0000
1,tih_rna_sample_00041_23KKJ7LT4_1,ATGGTTGTTG-AGTTATGAGG,92571494,91378197,1193297,0,0.0214,0.9871,0.0129,0.0000
1,tih_rna_sample_00042_23KKJ7LT4_1,ACAATAGCAC-GTATGCCTAT,70980577,70005510,975067,0,0.0164,0.9863,0.0137,0.0000
1,tih_rna_sample_00043_23KKJ7LT4_1,CTACAAGTTC-GCACCATGAA,94300326,93043615,1256711,0,0.0218,0.9867,0.0133,0.0000
1,tih_rna_sample_00024_23KKJ7LT4_1,TAAGATCGGA-TTCATCCGTG,82138864,81162070,976794,0,0.0190,0.9881,0.0119,0.0000
1,tih_rna_sample_00183_23KKJ7LT4_1,TTAGTTGCTG-ATGGCGGATT,76384362,75412058,972304,0,0.0176,0.9873,0.0127,0.0000
1,tih_rna_sample_00025_23KKJ7LT4_1,AGTCAGATGC-CTCACACACT,84426304,83115476,1310828,0,0.0195,0.9845,0.0155,0.0000
1,tih_rna_sample_00184_23KKJ7LT4_1,AGTACAACTG-CATTGAGTTC,121760385,120206988,1553397,0,0.0281,0.9872,0.0128,0.0000
1,tih_rna_sample_00027_23KKJ7LT4_1,CTTAGTACGC-GCTACAACGA,80454944,79326430,1128514,0,0.0186,0.9860,0.0140,0.0000
1,tih_rna_sample_00185_23KKJ7LT4_1,GTACGCATCG-GAGTTGTTCA,73304614,72045018,1259596,0,0.0169,0.9828,0.0172,0.0000
1,tih_rna_sample_00186_23KKJ7LT4_1,ACTTCCGTTC-CAATTCCGTG,115229658,113690313,1539345,0,0.0266,0.9866,0.0134,0.0000
1,tih_rna_sample_00207_23KKJ7LT4_1,AACCTGATCT-ATTCCGTCCG,79463437,78219826,1243611,0,0.0184,0.9843,0.0157,0.0000
1,Undetermined,,201657180,201657180,0,0,0.0466,1.0000,0.0000,0.0000