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Filename
Demultiplex_Stats_aggregate.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0006_exp0007/A23KKJ7LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/reports/Demultiplex_Stats_aggregate.csv
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11.6 KB
Workflow Run
dev_rna_exp06_07-73d51683
Published
Jun 08, 2026 12:00 AM

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SampleID Lanes Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
FFPE_HD789_02_RNA_0005_23KKJ7LT4_1 1,2,3,4 TCGTGACGAC-GTGACTAACT 532396900 521141630 11255270 0 0.0156 0.9789 0.0211 0.0
FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 5,6,7,8 GCGATGGAAG-GCCGCAAGAT 557577503 548236992 9340511 0 0.0163 0.9832 0.0168 0.0
FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 5,6,7,8 TTCCTTGAGG-TAAGACAGCA 281866641 277299747 4566894 0 0.0082 0.9838 0.0162 0.0
FFPE_V4_0001_RNA_0003_23KKJ7LT4_1 1,2,3,4 ATCCTAGAAC-TGAAGTCTGC 337919946 331268294 6651652 0 0.0099 0.9803 0.0197 0.0
NTC_0001_0001_23KKJ7LT4_1 1,2,3,4 AGGCAATCGC-ATGAGTCTGT 6189071 6056140 132931 0 0.0002 0.9785 0.0215 0.0
NTC_0001_0001_23KKJ7LT4_2 5,6,7,8 GCATCCTACT-GACATCGCGA 5082195 4980129 102066 0 0.0001 0.9799 0.0201 0.0
Undetermined 1,2,3,4,5,6,7,8 1741064015 1741064015 0 0 0.0509 1.0 0.0 0.0
tih_rna_sample_00001_23KKJ7LT4_1 1,2,3,4 TTGGATTGTC-CGGCTGTTAG 310543760 303645455 6898305 0 0.0091 0.9778 0.0222 0.0
tih_rna_sample_00002_23KKJ7LT4_1 1,2,3,4 AATTGGCACA-CAGTCGGAGT 302295148 295702797 6592351 0 0.0088 0.9782 0.0218 0.0
tih_rna_sample_00004_23KKJ7LT4_1 1,2,3,4 TGCAACACTA-CGTTCTGGTA 471348861 461169026 10179835 0 0.0138 0.9784 0.0216 0.0
tih_rna_sample_00005_23KKJ7LT4_1 1,2,3,4 GAATCGCCTG-CATTGACGGC 199253508 194445792 4807716 0 0.0058 0.9759 0.0241 0.0
tih_rna_sample_00006_23KKJ7LT4_1 1,2,3,4 TCGCATGACA-TTGGCCAATG 344539570 336786046 7753524 0 0.0101 0.9775 0.0225 0.0
tih_rna_sample_00007_23KKJ7LT4_1 1,2,3,4 TCAATACGTG-GCTGCTAATA 366316307 358080138 8236169 0 0.0107 0.9775 0.0225 0.0
tih_rna_sample_00008_23KKJ7LT4_1 1,2,3,4 ATTCTCCACG-TCGATGATCG 76703132 74917717 1785415 0 0.0022 0.9767 0.0233 0.0
tih_rna_sample_00009_23KKJ7LT4_1 1,2,3,4 TGTTACAGAG-TGTGTACCAG 403554630 391631816 11922814 0 0.0118 0.9705 0.0295 0.0
tih_rna_sample_00010_23KKJ7LT4_1 1,2,3,4 TTACGGACGC-ATTGGCCAGC 414477024 405345788 9131236 0 0.0121 0.978 0.022 0.0
tih_rna_sample_00012_23KKJ7LT4_1 1,2,3,4 CGTACTTAGA-CCGATGTTCA 364374048 356522903 7851145 0 0.0106 0.9785 0.0215 0.0
tih_rna_sample_00013_23KKJ7LT4_1 1,2,3,4 GCCGTGAACA-GCACCACCAT 232732903 227060473 5672430 0 0.0068 0.9756 0.0244 0.0
tih_rna_sample_00015_23KKJ7LT4_1 1,2,3,4 GAAGCAAGCG-TCACCGACTA 442583641 432173200 10410441 0 0.0129 0.9765 0.0235 0.0
tih_rna_sample_00016_23KKJ7LT4_1 1,2,3,4 AACGCGACTG-GACCTACGAG 225088684 220110158 4978526 0 0.0066 0.9779 0.0221 0.0
tih_rna_sample_00020_23KKJ7LT4_1 1,2,3,4 GCGGAGTCAA-CTCTATAGCT 373865240 365612396 8252844 0 0.0109 0.9779 0.0221 0.0
tih_rna_sample_00021_23KKJ7LT4_1 1,2,3,4 GATGCTAGAA-TGGATGCCAG 354474386 347389730 7084656 0 0.0104 0.98 0.02 0.0
tih_rna_sample_00022_23KKJ7LT4_1 1,2,3,4 ACGATGGTTA-AATTGCTAGG 401984543 393139316 8845227 0 0.0117 0.978 0.022 0.0
tih_rna_sample_00023_23KKJ7LT4_1 1,2,3,4 AGAGCAGTAT-CAAGAGGAGG 454849011 445549483 9299528 0 0.0133 0.9796 0.0204 0.0
tih_rna_sample_00024_23KKJ7LT4_1 1,2,3,4 TAAGATCGGA-TTCATCCGTG 326346297 319886470 6459827 0 0.0095 0.9802 0.0198 0.0
tih_rna_sample_00025_23KKJ7LT4_1 1,2,3,4 AGTCAGATGC-CTCACACACT 334451968 326592281 7859687 0 0.0098 0.9765 0.0235 0.0
tih_rna_sample_00027_23KKJ7LT4_1 1,2,3,4 CTTAGTACGC-GCTACAACGA 318171899 311191686 6980213 0 0.0093 0.9781 0.0219 0.0
tih_rna_sample_00030_23KKJ7LT4_1 1,2,3,4 TGGTGGTTGT-TACCTGTCAA 516817755 506279094 10538661 0 0.0151 0.9796 0.0204 0.0
tih_rna_sample_00032_23KKJ7LT4_1 1,2,3,4 CCAGTGCACT-CCTCCGTATC 447307225 435470083 11837142 0 0.0131 0.9735 0.0265 0.0
tih_rna_sample_00034_23KKJ7LT4_1 1,2,3,4 GCCTAGAGTC-ATGGTTCTCT 279840139 273836651 6003488 0 0.0082 0.9785 0.0215 0.0
tih_rna_sample_00035_23KKJ7LT4_1 1,2,3,4 CTTACTCTCT-CTGCTTAAGG 305118187 297680850 7437337 0 0.0089 0.9756 0.0244 0.0
tih_rna_sample_00036_23KKJ7LT4_1 1,2,3,4 CCGACAACCT-TTCTACCTGT 233562227 228311233 5250994 0 0.0068 0.9775 0.0225 0.0
tih_rna_sample_00037_23KKJ7LT4_1 1,2,3,4 GATCTGTATG-ATCGAAGAGC 650367433 636557953 13809480 0 0.019 0.9788 0.0212 0.0
tih_rna_sample_00039_23KKJ7LT4_1 1,2,3,4 GAATAGAGTG-CACAGCGTCT 410948151 402396512 8551639 0 0.012 0.9792 0.0208 0.0
tih_rna_sample_00041_23KKJ7LT4_1 1,2,3,4 ATGGTTGTTG-AGTTATGAGG 368231449 360797303 7434146 0 0.0108 0.9798 0.0202 0.0
tih_rna_sample_00042_23KKJ7LT4_1 1,2,3,4 ACAATAGCAC-GTATGCCTAT 281934345 275896423 6037922 0 0.0082 0.9786 0.0214 0.0
tih_rna_sample_00043_23KKJ7LT4_1 1,2,3,4 CTACAAGTTC-GCACCATGAA 374486353 366651068 7835285 0 0.0109 0.9791 0.0209 0.0
tih_rna_sample_00044_23KKJ7LT4_1 5,6,7,8 GCGCGGTTAA-AAGCTATAGC 317954016 312486480 5467536 0 0.0093 0.9828 0.0172 0.0
tih_rna_sample_00045_23KKJ7LT4_1 5,6,7,8 GTACGCTCAA-ATTGATGGCG 329028281 323608460 5419821 0 0.0096 0.9835 0.0165 0.0
tih_rna_sample_00046_23KKJ7LT4_1 5,6,7,8 TAGAAGATCG-CGACCAGTGT 315767719 308003519 7764200 0 0.0092 0.9754 0.0246 0.0
tih_rna_sample_00047_23KKJ7LT4_1 5,6,7,8 AACCTAGTGC-TACAGGTCCT 413202670 406949634 6253036 0 0.0121 0.9849 0.0151 0.0
tih_rna_sample_00048_23KKJ7LT4_1 5,6,7,8 CGTGTATGTC-GCATCTCTAT 344362858 339430041 4932817 0 0.0101 0.9857 0.0143 0.0
tih_rna_sample_00050_23KKJ7LT4_1 5,6,7,8 CTCACCAGTT-TTGGTGTGTC 372123180 364653589 7469591 0 0.0109 0.9799 0.0201 0.0
tih_rna_sample_00051_23KKJ7LT4_1 5,6,7,8 ACTAGTAGTC-ACGTACACTC 390469560 384666166 5803394 0 0.0114 0.9851 0.0149 0.0
tih_rna_sample_00052_23KKJ7LT4_1 5,6,7,8 AATAGACTGC-TCAAGGTCGC 472160402 463973036 8187366 0 0.0138 0.9827 0.0173 0.0
tih_rna_sample_00053_23KKJ7LT4_1 5,6,7,8 ATGATCAACG-GTATAGCGTC 170484623 167553824 2930799 0 0.005 0.9828 0.0172 0.0
tih_rna_sample_00054_23KKJ7LT4_1 5,6,7,8 TAGGAAGCGG-CCAATCCAGG 72855730 71634631 1221099 0 0.0021 0.9832 0.0168 0.0
tih_rna_sample_00056_23KKJ7LT4_1 5,6,7,8 AGTCCAGCGT-TGTCGTATTG 276847739 271896400 4951339 0 0.0081 0.9821 0.0179 0.0
tih_rna_sample_00057_23KKJ7LT4_1 5,6,7,8 AGGCAGCCAT-GAGTGTCTAG 45492614 44701726 790888 0 0.0013 0.9826 0.0174 0.0
tih_rna_sample_00058_23KKJ7LT4_1 5,6,7,8 GCGACTCGTA-CAGGCCATGT 305026256 296323305 8702951 0 0.0089 0.9715 0.0285 0.0
tih_rna_sample_00060_23KKJ7LT4_1 5,6,7,8 CATCACCTAA-TGGTGGTATT 227792050 220999950 6792100 0 0.0067 0.9702 0.0298 0.0
tih_rna_sample_00061_23KKJ7LT4_1 5,6,7,8 CGGCATATAC-ATGAGCTGGA 386753154 380271207 6481947 0 0.0113 0.9832 0.0168 0.0
tih_rna_sample_00063_23KKJ7LT4_1 5,6,7,8 CGGAGACTAT-ATGCTTCTAC 439708323 431227042 8481281 0 0.0129 0.9807 0.0193 0.0
tih_rna_sample_00064_23KKJ7LT4_1 5,6,7,8 AAGGTGTTAG-TGTGCTGGTG 555973866 546005560 9968306 0 0.0162 0.9821 0.0179 0.0
tih_rna_sample_00066_23KKJ7LT4_1 5,6,7,8 CGAGATTAGA-CTAATCGCGG 335470275 328624118 6846157 0 0.0098 0.9796 0.0204 0.0
tih_rna_sample_00068_23KKJ7LT4_1 5,6,7,8 ACAACACACA-CATCGGCACT 342747867 337504594 5243273 0 0.01 0.9847 0.0153 0.0
tih_rna_sample_00070_23KKJ7LT4_1 5,6,7,8 ACAGAGGCGT-GACATATCGG 379826057 373638295 6187762 0 0.0111 0.9837 0.0163 0.0
tih_rna_sample_00071_23KKJ7LT4_1 5,6,7,8 AACTGTACGG-CTCCAATATG 422450394 415046001 7404393 0 0.0123 0.9825 0.0175 0.0
tih_rna_sample_00072_23KKJ7LT4_1 5,6,7,8 GCGAAGTAGG-ACCATTGTGT 452273453 445465934 6807519 0 0.0132 0.9849 0.0151 0.0
tih_rna_sample_00073_23KKJ7LT4_1 5,6,7,8 GTGAAGACAC-TGGCTTGATC 272597989 268561817 4036172 0 0.008 0.9852 0.0148 0.0
tih_rna_sample_00074_23KKJ7LT4_1 5,6,7,8 GACTTAGGTC-CTATGGACTT 587277188 579366166 7911022 0 0.0172 0.9865 0.0135 0.0
tih_rna_sample_00077_23KKJ7LT4_1 5,6,7,8 CAACGTTGAC-TTGGACGGAA 324256687 318531348 5725339 0 0.0095 0.9823 0.0177 0.0
tih_rna_sample_00078_23KKJ7LT4_1 5,6,7,8 TGACATAGGT-TACCAGAGAT 434990186 428939494 6050692 0 0.0127 0.9861 0.0139 0.0
tih_rna_sample_00079_23KKJ7LT4_1 5,6,7,8 TTACACCAAC-ATGAGTTAGG 234525878 230771763 3754115 0 0.0069 0.984 0.016 0.0
tih_rna_sample_00080_23KKJ7LT4_1 5,6,7,8 CCTGGAATTA-CGTCATCGAA 251713156 245771240 5941916 0 0.0074 0.9764 0.0236 0.0
tih_rna_sample_00081_23KKJ7LT4_1 5,6,7,8 GCAACATCAA-TGACCTAGTT 359105649 352696419 6409230 0 0.0105 0.9822 0.0178 0.0
tih_rna_sample_00082_23KKJ7LT4_1 5,6,7,8 ACAGCCAGGT-TCATGGTACT 377856478 371801548 6054930 0 0.011 0.984 0.016 0.0
tih_rna_sample_00083_23KKJ7LT4_1 5,6,7,8 TAGTCCATCT-GACAGGACAG 331174788 325754526 5420262 0 0.0097 0.9836 0.0164 0.0
tih_rna_sample_00084_23KKJ7LT4_1 5,6,7,8 GCCTCTCAGA-CGTGACGACT 176284734 173067079 3217655 0 0.0052 0.9817 0.0183 0.0
tih_rna_sample_00086_23KKJ7LT4_1 5,6,7,8 AAGACTCTCG-GCTCTCCTTC 400769882 393416780 7353102 0 0.0117 0.9817 0.0183 0.0
tih_rna_sample_00170_23KKJ7LT4_1 1,2,3,4 CCAATGTTGA-CTTGAATGTC 286597921 281079927 5517994 0 0.0084 0.9807 0.0193 0.0
tih_rna_sample_00176_23KKJ7LT4_1 1,2,3,4 AGGAGACCAC-TACCACGTAG 261553534 255848754 5704780 0 0.0076 0.9782 0.0218 0.0
tih_rna_sample_00179_23KKJ7LT4_1 1,2,3,4 TCAATCTAGC-TCCGAATAAG 368668141 360885720 7782421 0 0.0108 0.9789 0.0211 0.0
tih_rna_sample_00180_23KKJ7LT4_1 1,2,3,4 TTGTGATCCT-ATGAAGGCAT 463737654 454361407 9376247 0 0.0136 0.9798 0.0202 0.0
tih_rna_sample_00183_23KKJ7LT4_1 1,2,3,4 TTAGTTGCTG-ATGGCGGATT 303019249 297010844 6008405 0 0.0089 0.9802 0.0198 0.0
tih_rna_sample_00184_23KKJ7LT4_1 1,2,3,4 AGTACAACTG-CATTGAGTTC 483687852 473636034 10051818 0 0.0141 0.9792 0.0208 0.0
tih_rna_sample_00185_23KKJ7LT4_1 1,2,3,4 GTACGCATCG-GAGTTGTTCA 290888564 283734596 7153968 0 0.0085 0.9754 0.0246 0.0
tih_rna_sample_00186_23KKJ7LT4_1 1,2,3,4 ACTTCCGTTC-CAATTCCGTG 459486047 449913679 9572368 0 0.0134 0.9792 0.0208 0.0
tih_rna_sample_00198_23KKJ7LT4_1 1,2,3,4 ACGCAACACA-CATTCAGGAG 247926719 242340917 5585802 0 0.0072 0.9775 0.0225 0.0
tih_rna_sample_00200_23KKJ7LT4_1 1,2,3,4 CATCAGGCGT-CGTGTTACCG 109061186 106318010 2743176 0 0.0032 0.9748 0.0252 0.0
tih_rna_sample_00202_23KKJ7LT4_1 1,2,3,4 ATAGGCAGTG-CAGAACTTAG 506896219 497116211 9780008 0 0.0148 0.9807 0.0193 0.0
tih_rna_sample_00204_23KKJ7LT4_1 1,2,3,4 GTAACAGGAA-TGTCTTCAGA 16997344 16622954 374390 0 0.0005 0.978 0.022 0.0
tih_rna_sample_00206_23KKJ7LT4_1 1,2,3,4 TTCGCGGACT-AGAGAGTGGT 436109161 427415331 8693830 0 0.0127 0.9801 0.0199 0.0
tih_rna_sample_00207_23KKJ7LT4_1 1,2,3,4 AACCTGATCT-ATTCCGTCCG 315520314 308199103 7321211 0 0.0092 0.9768 0.0232 0.0
tih_rna_sample_00208_23KKJ7LT4_1 5,6,7,8 GAGTCGCTTC-AGCGAAGATT 386792813 379646125 7146688 0 0.0113 0.9815 0.0185 0.0
tih_rna_sample_00216_23KKJ7LT4_1 5,6,7,8 TTCAGATCCA-TGGCATTGGA 69982727 68815429 1167298 0 0.002 0.9833 0.0167 0.0
tih_rna_sample_00219_23KKJ7LT4_1 5,6,7,8 GTATCTGAGG-ACGTATCTTG 335334306 330649185 4685121 0 0.0098 0.986 0.014 0.0
tih_rna_sample_00223_23KKJ7LT4_1 5,6,7,8 CACGAGTGTC-TAGGCTAGAG 417225338 411392891 5832447 0 0.0122 0.986 0.014 0.0
tih_rna_sample_00224_23KKJ7LT4_1 5,6,7,8 ACGGTCGCAT-GTACTCTCTA 326352450 321240253 5112197 0 0.0095 0.9843 0.0157 0.0
tih_rna_sample_00225_23KKJ7LT4_1 5,6,7,8 TTACACACGG-AACTCCGAGA 466734904 459411697 7323207 0 0.0136 0.9843 0.0157 0.0
tih_rna_sample_00226_23KKJ7LT4_1 5,6,7,8 CAAGGATCGA-GCAGACACAA 319097256 313974720 5122536 0 0.0093 0.9839 0.0161 0.0
tih_rna_sample_00234_23KKJ7LT4_1 1,2,3,4 CCACCTGCTT-TGTTACCGTC 390310235 380705931 9604304 0 0.0114 0.9754 0.0246 0.0
tih_rna_sample_00239_23KKJ7LT4_1 5,6,7,8 AAGAGCTCGC-CCAATAGATC 284449737 279938359 4511378 0 0.0083 0.9841 0.0159 0.0
tih_rna_sample_00243_23KKJ7LT4_1 5,6,7,8 AGGACGGACA-GAAGTCGTGG 340376440 333707932 6668508 0 0.0099 0.9804 0.0196 0.0
tih_rna_sample_00244_23KKJ7LT4_1 5,6,7,8 CCTATGTGTA-TAGTGAGTCG 422882094 416241708 6640386 0 0.0124 0.9843 0.0157 0.0
tih_rna_sample_00245_23KKJ7LT4_1 5,6,7,8 TAGGTTCAAG-ACTTACCGGC 517049825 509545050 7504775 0 0.0151 0.9855 0.0145 0.0
tih_rna_sample_00247_23KKJ7LT4_1 5,6,7,8 GAAGATCGAC-AGTGACCACG 222632937 219095594 3537343 0 0.0065 0.9841 0.0159 0.0
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