#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	11068	311	11068.00	306.24	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	1721	2543	6.61	4.47	GT	1.8892	AG	1.7819	38.4808	627	0
FGFR3--TACC3	132	314	132.00	6.46	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	26236	chr4:1738348:+	ONLY_REF_SPLICE	YES	1721	1652	0.26	0.27	GT	1.8892	AG	1.9086	0.4685	310	0
FGFR3--TACC3	7	314	7.00	0.34	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	26224	chr4:1738336:+	INCL_NON_REF_SPLICE	YES	1721	1652	0.19	0.19	GT	1.8892	AG	1.8323	0.0249	299	0
FGFR3--TACC3	6	314	6.00	0.29	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	22063	chr4:1730798:+	INCL_NON_REF_SPLICE	NO	1721	1510	0.19	0.21	GT	1.8892	AG	1.6895	0.0213	1411	0
FGFR3--TACC3	5	311	5.00	0.14	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27587	chr4:1739699:+	INCL_NON_REF_SPLICE	YES	1721	2499	0.18	0.13	GT	1.8892	AG	1.7819	0.0174	630	0
FGFR3--TACC3	4	311	4.00	0.11	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27358	chr4:1739470:+	INCL_NON_REF_SPLICE	YES	1721	1762	0.18	0.18	GT	1.8892	AG	1.5850	0.0139	766	0
FGFR3--TACC3	6	300	6.00	0.16	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27596	chr4:1739708:+	INCL_NON_REF_SPLICE	YES	1721	2808	0.18	0.11	GT	1.8892	AG	1.5058	0.0208	622	0
FGFR3--TACC3	3	311	3.00	0.08	FGFR3^ENSG00000068078.20	9880	chr4:1806936:+	TACC3^ENSG00000013810.20	27593	chr4:1739705:+	INCL_NON_REF_SPLICE	YES	1514	2666	0.21	0.12	GA	1.8892	TA	1.5219	0.0104	623	0
FGFR3--TACC3	8	239	8.00	0.17	FGFR3^ENSG00000068078.20	9872	chr4:1806928:+	TACC3^ENSG00000013810.20	27587	chr4:1739699:+	INCL_NON_REF_SPLICE	YES	1905	2499	0.13	0.10	AC	1.8892	AG	1.7819	0.0277	633	0
FGFR3--TACC3	1	31	1.00	0.00	FGFR3^ENSG00000068078.20	9627	chr4:1806683:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	3272	2543	0.01	0.01	GT	1.7968	AG	1.7819	0.0034	556	0
FGFR3--TACC3	1	10	1.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	28714	chr4:1740826:+	ONLY_REF_SPLICE	YES	1721	3993	0.01	0.00	GT	1.8892	AG	1.8323	0.0034	322	0
FGFR3--TACC3	3	0	3.00	0.00	FGFR3^ENSG00000068078.20	9104	chr4:1806160:+	TACC3^ENSG00000013810.20	27847	chr4:1739959:+	INCL_NON_REF_SPLICE	YES	4583	3396	0.00	0.00	GA	1.7819	AG	1.8323	0.0101	331	0
FGFR3--TACC3	3	0	3.00	0.00	FGFR3^ENSG00000068078.20	9264	chr4:1806320:+	TACC3^ENSG00000013810.20	31110	chr4:1744539:+	INCL_NON_REF_SPLICE	YES	4347	4427	0.00	0.00	GT	1.7819	AG	1.8892	0.0101	318	0
FGFR3--TACC3	1	0	1.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	31089	chr4:1744518:+	ONLY_REF_SPLICE	YES	1721	3945	0.00	0.00	GT	1.8892	AG	1.8892	0.0034	106	0
MRPS16--CFAP70	406	11	406.00	5.60	MRPS16^ENSG00000182180.14	2770	chr10:73250924:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	INCL_NON_REF_SPLICE	YES	1597	140	0.26	2.96	GC	1.7819	AG	1.9329	1.3925	2054	0
MRPS16--CFAP70	194	22	194.00	9.49	MRPS16^ENSG00000182180.14	2879	chr10:73250815:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	INCL_NON_REF_SPLICE	YES	551	140	0.39	1.54	GT	1.7056	AG	1.9329	0.6884	1962	0
MRPS16--CFAP70	128	20	128.00	5.07	MRPS16^ENSG00000182180.14	2856	chr10:73250838:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	INCL_NON_REF_SPLICE	YES	722	140	0.21	1.06	GT	1.9086	AG	1.9329	0.4502	1981	0
MRPS16--CFAP70	63	4	63.00	0.30	MRPS16^ENSG00000182180.14	1931	chr10:73251763:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	ONLY_REF_SPLICE	YES	1621	140	0.04	0.48	GT	1.9329	AG	1.9329	0.2141	2803	0
MRPS16--CFAP70	29	22	29.00	1.42	MRPS16^ENSG00000182180.14	2885	chr10:73250809:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	INCL_NON_REF_SPLICE	YES	522	140	0.10	0.37	GT	1.7056	AG	1.9329	0.1029	1957	0
MRPS16--CFAP70	8	12	8.00	0.13	MRPS16^ENSG00000182180.14	2784	chr10:73250910:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	INCL_NON_REF_SPLICE	YES	1509	140	0.01	0.15	GT	1.9656	AG	1.9329	0.0275	2042	0
MRPS16--CFAP70	1	4	1.00	0.00	MRPS16^ENSG00000182180.14	1931	chr10:73251763:-	CFAP70^ENSG00000156042.18	37210	chr10:73254055:-	ONLY_REF_SPLICE	YES	1621	412	0.00	0.01	GT	1.9329	AG	1.7465	0.0034	3349	0
PCDHGB2--PCDHGA10	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA10^ENSG00000253846.2	12051	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	99	155.00	1.55	GT	1.7819	AG	1.3383	0.0651	1890	0
PCDHGB2--PCDHGA11	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA11^ENSG00000253873.6	11222	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	21	155.00	7.05	GT	1.7819	AG	1.3383	0.0651	1018	0
PCDHGB2--PCDHGA12	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA12^ENSG00000253159.3	10305	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	86	155.00	1.78	GT	1.7819	AG	1.3383	0.0651	1413	0
PCDHGB2--PCDHGA8	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA8^ENSG00000253767.3	14069	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	34	155.00	4.43	GT	1.7819	AG	1.3383	0.0651	1419	0
PCDHGB2--PCDHGA9	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA9^ENSG00000261934.2	10157	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	165	155.00	0.93	GT	1.7819	AG	1.3383	0.0651	1493	0
PCDHGB2--PCDHGC3	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC3^ENSG00000240184.7	10438	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	1184	155.00	0.13	GT	1.7819	AG	1.3383	0.0651	1210	0
PCDHGB2--PCDHGC4	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC4^ENSG00000242419.5	10382	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	0	155.00	155.00	GT	1.7819	AG	1.3383	0.0651	1585	0
PCDHGB2--PCDHGC5	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC5^ENSG00000240764.4	10438	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	19	155.00	7.75	GT	1.7819	AG	1.3383	0.0651	1206	0
TVP23C--CDRT4	128	2	128.00	1.08	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	686	23	0.19	5.46	GT	1.8323	AG	1.9899	0.4367	2126	0
TVP23C--CDRT4	88	8	88.00	6.51	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	INCL_NON_REF_SPLICE	YES	93	23	1.03	4.04	GT	1.9329	AG	1.9899	0.3197	1215	0
TVP23C--CDRT4	18	0	18.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	686	84	0.03	0.22	GT	1.8323	AG	1.6402	0.0609	1363	0
TVP23C--CDRT4	15	2	15.00	0.28	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	INCL_NON_REF_SPLICE	YES	93	84	0.19	0.21	GT	1.9329	AG	1.6402	0.0516	137	0
TVP23C--CDRT4	14	2	14.00	0.12	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	44	23	0.38	0.71	GT	1.8892	AG	1.9899	0.0478	1949	0
TVP23C--CDRT4	1	2	1.00	0.01	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	21051	chr17:15453085:-	ONLY_REF_SPLICE	NO	686	0	0.01	4.00	GT	1.8323	AG	1.8892	0.0034	1044	0
TVP23C--CDRT4	1	0	1.00	0.00	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	44	84	0.04	0.02	GT	1.8892	AG	1.6402	0.0034	873	0
PCDHA10--PCDHAC1	111	6	55.50	3.00	PCDHA10^ENSG00000250120.8	3554	chr5:140858436:+	PCDHAC1^ENSG00000248383.5	21506	chr5:140978949:+	INCL_NON_REF_SPLICE	YES	26	28	4.37	4.07	GT	1.9329	AG	1.3996	0.1979	1105	0
PCDHA10--PCDHAC2	111	6	55.50	3.00	PCDHA10^ENSG00000250120.8	3554	chr5:140858436:+	PCDHAC2^ENSG00000243232.6	20370	chr5:140978949:+	INCL_NON_REF_SPLICE	YES	26	64	4.37	1.82	GT	1.9329	AG	1.3996	0.1979	1235	0
STX16--NPEPL1	99	7	99.00	7.00	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1208	67	0.09	1.57	GT	1.7968	AG	1.8256	0.3586	1940	0
STX16--NPEPL1	1	0	1.00	0.00	STX16^ENSG00000124222.22	7774	chr20:58671297:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1106	67	0.00	0.03	GT	1.8062	AG	1.8256	0.0034	2729	0
TMED7--TICAM2	91	10	91.00	9.62	TMED7^ENSG00000134970.14	4947	chr5:115616318:-	TICAM2^ENSG00000243414.6	13048	chr5:115581315:-	INCL_NON_REF_SPLICE	YES	1387	149	0.07	0.68	GT	1.9329	AG	1.6729	0.3404	331	0
TMED7--TICAM2	14	3	14.00	0.38	TMED7^ENSG00000134970.14	4947	chr5:115616318:-	TICAM2^ENSG00000243414.6	13166	chr5:115581197:-	INCL_NON_REF_SPLICE	YES	1387	385	0.01	0.05	GT	1.9329	AG	1.9656	0.0487	213	0
TMED7--TICAM2	8	0	8.00	0.00	TMED7^ENSG00000134970.14	3819	chr5:115620435:-	TICAM2^ENSG00000243414.6	13048	chr5:115581315:-	ONLY_REF_SPLICE	YES	1453	149	0.01	0.06	GT	1.9656	AG	1.6729	0.0271	1185	0
TLK2--FAM157A	93	0	93.00	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	FAM157A^ENSG00000236438.7	45187	chr3:198180755:+	ONLY_REF_SPLICE	YES	908	145	0.10	0.64	GT	1.8892	AG	1.8892	0.3146	2733	0
AC092807.3--DDAH1	78	8	78.00	7.61	AC092807.3^ENSG00000282057.1	5553	chr1:85496166:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	1	307	43.50	0.28	GT	1.5628	AG	1.8062	0.2896	3011	0
AC092807.3--DDAH1	26	0	26.00	0.00	AC092807.3^ENSG00000282057.1	1267	chr1:85577984:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	2	307	9.00	0.09	GT	1.8062	AG	1.8062	0.088	2484	0
AC092807.3--DDAH1	4	8	4.00	0.39	AC092807.3^ENSG00000282057.1	9402	chr1:85488291:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	307	13.00	0.04	GT	1.8892	AG	1.8062	0.0148	2892	0
AC092807.3--DDAH1	1	0	1.00	0.00	AC092807.3^ENSG00000282057.1	1267	chr1:85577984:-	DDAH1^ENSG00000153904.21	17312	chr1:85351579:-	ONLY_REF_SPLICE	YES	2	283	0.67	0.01	GT	1.8062	AG	1.8062	0.0034	3584	0
AC092807.3--DDAH1	1	0	1.00	0.00	AC092807.3^ENSG00000282057.1	2469	chr1:85576657:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	1	307	1.00	0.01	GT	1.8892	AG	1.8062	0.0034	2786	0
AC015911.9--SLFN12L	66	15	66.00	14.42	AC015911.9^ENSG00000286030.2	1691	chr17:35522279:-	SLFN12L^ENSG00000205045.11	6142	chr17:35480195:-	ONLY_REF_SPLICE	YES	0	115	82.00	0.71	GT	1.9329	AG	1.8892	0.2721	533	0
AC015911.9--SLFN12L	29	2	29.00	0.52	AC015911.9^ENSG00000286030.2	1691	chr17:35522279:-	SLFN12L^ENSG00000286065.2	8152	chr17:35478185:-	ONLY_REF_SPLICE	YES	0	179	32.00	0.18	GT	1.9329	AG	1.9329	0.0999	1380	0
AC015911.9--SLFN12L	6	1	6.00	0.05	AC015911.9^ENSG00000286030.2	1691	chr17:35522279:-	SLFN12L^ENSG00000205045.11	9263	chr17:35475485:-	ONLY_REF_SPLICE	YES	0	216	8.00	0.04	GT	1.9329	AG	1.7968	0.0205	508	0
PDXDC1--NPIPB5	53	19	53.00	19.00	PDXDC1^ENSG00000179889.19	18993	chr16:15030056:+	NPIPB5^ENSG00000243716.10	46643	chr16:22513522:+	ONLY_REF_SPLICE	YES	1579	389	0.05	0.19	GT	1.9329	AG	1.9329	0.2436	391	0
AGAP12P--FRMPD2	45	2	45.00	2.00	AGAP12P^ENSG00000265018.6	3807	chr10:48025897:-	FRMPD2^ENSG00000170324.21	35365	chr10:48181008:-	ONLY_REF_SPLICE	YES	692	1	0.07	24.00	GT	1.7465	AG	1.5656	0.159	1060	0
AP001347.1--ANKRD20A11P	17	1	17.00	0.29	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	9303	chr21:13979932:-	INCL_NON_REF_SPLICE	YES	33	11	0.56	1.58	GT	1.8323	AG	1.5628	0.0585	3573	0
AP001347.1--ANKRD20A11P	13	1	13.00	0.22	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	13948	chr21:13970110:-	ONLY_REF_SPLICE	YES	33	24	0.44	0.60	GT	1.8323	AG	1.8892	0.0447	2637	0
AP001347.1--ANKRD20A11P	12	1	12.00	0.20	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	19375	chr21:13954150:-	ONLY_REF_SPLICE	YES	33	33	0.41	0.41	GT	1.8323	AG	1.9656	0.0413	2888	0
AP001347.1--ANKRD20A11P	7	1	7.00	0.12	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	9351	chr21:13979884:-	INCL_NON_REF_SPLICE	YES	33	25	0.26	0.35	GT	1.8323	AG	1.5656	0.0241	3536	0
AP001347.1--ANKRD20A11P	4	1	4.00	0.07	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	19378	chr21:13954147:-	INCL_NON_REF_SPLICE	YES	33	36	0.18	0.16	GT	1.8323	AG	1.9656	0.0137	2887	0
AP001347.1--ANKRD20A11P	3	1	3.00	0.05	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	9298	chr21:13979937:-	INCL_NON_REF_SPLICE	YES	33	10	0.15	0.45	GT	1.8323	AG	1.7465	0.0103	3577	0
AP001347.1--ANKRD20A11P	3	1	3.00	0.05	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	18305	chr21:13958185:-	ONLY_REF_SPLICE	YES	33	27	0.15	0.18	GT	1.8323	AG	1.8062	0.0103	3488	0
AP001347.1--ANKRD20A11P	2	0	2.00	0.00	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	20460	chr21:13951260:-	ONLY_REF_SPLICE	YES	33	86	0.09	0.03	GT	1.8323	AG	1.8323	0.0068	2609	0
KLRC4--KLRK1	15	3	15.00	3.00	KLRC4^ENSG00000183542.5	3122	chr12:10407636:-	KLRK1^ENSG00000213809.9	8583	chr12:10388875:-	INCL_NON_REF_SPLICE	YES	15	44	1.19	0.42	GT	1.3996	AG	1.9219	0.0608	1207	0
SOGA3--KIAA0408	15	1	15.00	1.00	SOGA3^ENSG00000214338.10	11088	chr6:127473080:-	KIAA0408^ENSG00000189367.15	15731	chr6:127454101:-	INCL_NON_REF_SPLICE	YES	0	7	17.00	2.12	GT	1.6895	AG	1.7465	0.0541	176	0
ANK3--AC036101.1	6	0	6.00	0.00	ANK3^ENSG00000151150.22	23110	chr10:60196145:-	AC036101.1^ENSG00000226296.1	78045	chr10:53291594:-	ONLY_REF_SPLICE	YES	317	0	0.02	7.00	GT	1.5656	AG	1.8323	0.0203	9056	0