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659_gK-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/659_gK-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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5.5 KB
Workflow Run
dev_rna_exp09_10-2cae617
Published
May 16, 2026 6:22 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
LMNA--NTRK1 9043 128 9043.00 126.24 LMNA^ENSG00000160789.23 17733 chr1:156130773:+ NTRK1^ENSG00000198400.13 40289 chr1:156874906:+ ONLY_REF_SPLICE YES 3604 417 2.54 21.94 GT 1.7465 AG 1.5058 31.0458 947 0
LMNA--NTRK1 115 132 115.00 5.66 LMNA^ENSG00000160789.23 18744 chr1:156134413:+ NTRK1^ENSG00000198400.13 40214 chr1:156874831:+ INCL_NON_REF_SPLICE YES 3716 37 0.07 6.53 CC 1.9329 GA 1.7968 0.4086 553 0
LMNA--NTRK1 67 6 67.00 0.04 LMNA^ENSG00000160789.23 12742 chr1:156115274:+ NTRK1^ENSG00000198400.13 40289 chr1:156874906:+ ONLY_REF_SPLICE YES 5139 417 0.01 0.18 GT 1.7465 AG 1.5058 0.227 458 0
LMNA--NTRK1 4 109 4.00 0.05 LMNA^ENSG00000160789.23 17734 chr1:156130774:+ NTRK1^ENSG00000198400.13 40292 chr1:156874909:+ INCL_NON_REF_SPLICE YES 3602 512 0.03 0.22 TG 1.7465 TC 1.4566 0.0137 949 0
LMNA--NTRK1 15 1 15.00 0.00 LMNA^ENSG00000160789.23 17733 chr1:156130773:+ NTRK1^ENSG00000198400.13 43833 chr1:156879999:+ ONLY_REF_SPLICE YES 3604 3424 0.00 0.00 GT 1.7465 AG 1.6895 0.0508 72 2
LMNA--NTRK1 6 1 6.00 0.00 LMNA^ENSG00000160789.23 17703 chr1:156130743:+ NTRK1^ENSG00000198400.13 40944 chr1:156875561:+ INCL_NON_REF_SPLICE YES 4068 3623 0.00 0.00 CT 1.6729 CC 1.9329 0.0203 1299 0
LMNA--NTRK1 5 2 5.00 0.00 LMNA^ENSG00000160789.23 17733 chr1:156130773:+ NTRK1^ENSG00000198400.13 42956 chr1:156879122:+ ONLY_REF_SPLICE YES 3604 2198 0.00 0.00 GT 1.7465 AG 1.9656 0.0169 882 0
LMNA--NTRK1 4 0 4.00 0.00 LMNA^ENSG00000160789.23 12658 chr1:156115190:+ NTRK1^ENSG00000198400.13 40345 chr1:156874962:+ INCL_NON_REF_SPLICE YES 5646 1815 0.00 0.00 CC 1.8256 CT 1.9329 0.0135 514 0
LMNA--NTRK1 2 0 2.00 0.00 LMNA^ENSG00000160789.23 12742 chr1:156115274:+ NTRK1^ENSG00000198400.13 42956 chr1:156879122:+ ONLY_REF_SPLICE YES 5139 2198 0.00 0.00 GT 1.7465 AG 1.9656 0.0068 2478 0
LMNA--NTRK1 1 0 1.00 0.00 LMNA^ENSG00000160789.23 12742 chr1:156115274:+ NTRK1^ENSG00000198400.13 43833 chr1:156879999:+ ONLY_REF_SPLICE YES 5139 3424 0.00 0.00 GT 1.7465 AG 1.6895 0.0034 1609 0
PTPRK--RSPO3 795 18 795.00 17.67 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 55391 chr6:127148648:+ ONLY_REF_SPLICE YES 1316 265 0.62 3.06 GT 1.8892 AG 1.9329 2.7516 1100 0
PTPRK--RSPO3 15 18 15.00 0.33 PTPRK^ENSG00000152894.15 3698 chr6:128491732:- RSPO3^ENSG00000146374.14 55391 chr6:127148648:+ ONLY_REF_SPLICE YES 1121 265 0.03 0.13 GT 1.7056 AG 1.9329 0.0519 1692 0
PTPRK--RSPO3 12 0 12.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 56583 chr6:127150426:+ ONLY_REF_SPLICE YES 1316 963 0.01 0.01 GT 1.8892 AG 1.9219 0.0406 125 0
PTPRK--RSPO3 3 0 3.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 58928 chr6:127195823:+ ONLY_REF_SPLICE YES 1316 526 0.00 0.01 GT 1.8892 AG 0.9710 0.0102 1145 0
PTPRK--RSPO3 3 0 3.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 56666 chr6:127150509:+ INCL_NON_REF_SPLICE YES 1316 1046 0.00 0.00 GT 1.8892 AG 1.9656 0.0102 144 0
PTPRK--RSPO3 1 0 1.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 57730 chr6:127155241:+ ONLY_REF_SPLICE YES 1316 1410 0.00 0.00 GT 1.8892 AG 1.9656 0.0034 1143 0
AK3--CDKN2A 232 6 232.00 6.00 AK3^ENSG00000147853.17 2107 chr9:4740937:- CDKN2A^ENSG00000147889.18 18349 chr9:21971208:- ONLY_REF_SPLICE YES 414 72 0.58 3.27 GT 1.7968 AG 1.8892 0.8058 272 0
AK3--CDKN2A 15 0 15.00 0.00 AK3^ENSG00000147853.17 1072 chr9:4741972:- CDKN2A^ENSG00000147889.18 18349 chr9:21971208:- ONLY_REF_SPLICE YES 1 72 8.00 0.22 GT 1.9656 AG 1.8892 0.0508 926 0
AK3--CDKN2A 3 0 3.00 0.00 AK3^ENSG00000147853.17 2107 chr9:4740937:- CDKN2A^ENSG00000147889.18 21315 chr9:21968242:- ONLY_REF_SPLICE YES 414 325 0.01 0.01 GT 1.7968 AG 1.9086 0.0102 2720 0
AK3--CDKN2A 3 0 3.00 0.00 AK3^ENSG00000147853.17 1894 chr9:4741150:- CDKN2A^ENSG00000147889.18 18349 chr9:21971208:- INCL_NON_REF_SPLICE YES 345 72 0.01 0.05 GT 1.6895 AG 1.8892 0.0102 249 0
AK3--CDKN2A 1 0 1.00 0.00 AK3^ENSG00000147853.17 1323 chr9:4741721:- CDKN2A^ENSG00000147889.18 18349 chr9:21971208:- ONLY_REF_SPLICE YES 2 72 0.67 0.03 GT 1.8892 AG 1.8892 0.0034 686 0
FBXO25--AC240565.1 195 0 195.00 0.00 FBXO25^ENSG00000147364.17 7247 chr8:435707:+ AC240565.1^ENSG00000280136.2 27298 chr17:106864:- ONLY_REF_SPLICE YES 400 44 0.49 4.36 GT 1.7819 AG 1.8892 0.6602 7162 0
TLK2--FAM157A 113 1 108.75 1.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ FAM157A^ENSG00000236438.7 45187 chr3:198180755:+ ONLY_REF_SPLICE YES 613 46 0.19 2.45 GT 1.8892 AG 1.8892 0.3716 2733 0
STX16--NPEPL1 83 0 83.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1210 49 0.07 1.68 GT 1.7968 AG 1.8256 0.281 1940 0
STX16--NPEPL1 3 0 3.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1104 49 0.00 0.08 GT 1.8062 AG 1.8256 0.0102 2729 0
GUSBP13--NAIP 77 3 77.00 3.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 14552 chr5:71003857:- ONLY_REF_SPLICE YES 0 234 81.00 0.34 GT 1.9329 AG 1.8295 0.2709 2864 0
TLK2P1--AC110079.1 68 0 60.25 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 49 36 1.38 1.86 GT 1.7465 AG 1.8892 0.204 311 0
28 rows