#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	33175	128	33175.00	118.13	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	22437	chr4:1731172:+	ONLY_REF_SPLICE	YES	3165	1802	10.52	18.47	GT	1.8892	AG	1.9086	112.737	1780	0
FGFR3--TACC3	2612	132	2612.00	13.31	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	22419	chr4:1731154:+	INCL_NON_REF_SPLICE	YES	3165	1464	0.87	1.87	GT	1.8892	GA	1.2729	8.8898	1763	0
FGFR3--TACC3	157	36	157.00	0.16	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	22512	chr4:1731247:+	INCL_NON_REF_SPLICE	YES	3165	4574	0.06	0.04	GT	1.8892	AG	1.7056	0.5321	1855	0
FGFR3--TACC3	66	127	66.00	0.23	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	22440	chr4:1731175:+	INCL_NON_REF_SPLICE	YES	3165	2080	0.06	0.09	GT	1.8892	AG	1.9899	0.2243	1783	0
FGFR3--TACC3	61	7	61.00	0.01	FGFR3^ENSG00000068078.20	9625	chr4:1806681:+	TACC3^ENSG00000013810.20	22463	chr4:1731198:+	INCL_NON_REF_SPLICE	YES	7075	3089	0.01	0.02	CT	1.7056	AC	1.8295	0.2066	1857	0
FGFR3--TACC3	23	127	23.00	0.08	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	22439	chr4:1731174:+	INCL_NON_REF_SPLICE	YES	3165	2031	0.05	0.07	GT	1.8892	GA	1.9899	0.0782	1782	0
FGFR3--TACC3	3	124	3.00	0.01	FGFR3^ENSG00000068078.20	9877	chr4:1806933:+	TACC3^ENSG00000013810.20	22421	chr4:1731156:+	INCL_NON_REF_SPLICE	YES	3341	1467	0.04	0.09	CG	1.8892	CT	1.5329	0.0102	1765	0
FGFR3--TACC3	26	29	26.00	0.02	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	22540	chr4:1731275:+	INCL_NON_REF_SPLICE	YES	3165	4863	0.02	0.01	GT	1.8892	AG	1.8323	0.0881	1883	0
FGFR3--TACC3	3	85	3.00	11.03	FGFR3^ENSG00000068078.20	9886	chr4:1806942:+	TACC3^ENSG00000013810.20	22451	chr4:1731186:+	INCL_NON_REF_SPLICE	YES	2573	2697	0.03	0.03	TG	1.9086	AA	1.7232	0.0475	1793	0
FGFR3--TACC3	18	21	18.00	0.01	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	23567	chr4:1735273:+	ONLY_REF_SPLICE	YES	3165	4912	0.01	0.01	GT	1.8892	AG	1.8892	0.061	2006	0
FGFR3--TACC3	4	29	4.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	22542	chr4:1731277:+	INCL_NON_REF_SPLICE	YES	3165	4928	0.01	0.01	GT	1.8892	AG	1.9086	0.0135	1884	0
FGFR3--TACC3	7	6	7.00	0.00	FGFR3^ENSG00000068078.20	9823	chr4:1806879:+	TACC3^ENSG00000013810.20	22505	chr4:1731240:+	INCL_NON_REF_SPLICE	YES	4104	4505	0.00	0.00	CT	1.6729	AC	1.8256	0.0237	1856	0
FGFR3--TACC3	8	0	8.00	0.00	FGFR3^ENSG00000068078.20	9090	chr4:1806146:+	TACC3^ENSG00000013810.20	22463	chr4:1731198:+	INCL_NON_REF_SPLICE	YES	8346	3089	0.00	0.00	CT	1.8256	AC	1.8295	0.0271	2066	0
FGFR3--TACC3	4	9	4.00	0.00	FGFR3^ENSG00000068078.20	9628	chr4:1806684:+	TACC3^ENSG00000013810.20	22453	chr4:1731188:+	INCL_NON_REF_SPLICE	YES	6027	2769	0.00	0.01	TG	1.8892	CT	1.7232	0.0135	1847	0
FGFR3--TACC3	6	0	6.00	0.00	FGFR3^ENSG00000068078.20	9861	chr4:1806917:+	TACC3^ENSG00000013810.20	24107	chr4:1735813:+	INCL_NON_REF_SPLICE	YES	4050	10051	0.00	0.00	CC	1.9329	GC	1.7819	0.0203	1466	0
FGFR3--TACC3	6	0	6.00	0.00	FGFR3^ENSG00000068078.20	9603	chr4:1806659:+	TACC3^ENSG00000013810.20	27862	chr4:1739974:+	INCL_NON_REF_SPLICE	YES	9722	7531	0.00	0.00	GC	1.7819	AG	1.7819	0.0203	630	0
FGFR3--TACC3	3	11	3.00	0.00	FGFR3^ENSG00000068078.20	9823	chr4:1806879:+	TACC3^ENSG00000013810.20	22475	chr4:1731210:+	INCL_NON_REF_SPLICE	YES	4104	3598	0.00	0.00	CT	1.6729	AC	1.9329	0.0102	1826	0
FGFR3--TACC3	5	2	5.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	24031	chr4:1735737:+	ONLY_REF_SPLICE	YES	3165	5582	0.00	0.00	GT	1.8892	AG	1.8295	0.0169	1542	0
FGFR3--TACC3	3	9	3.00	0.00	FGFR3^ENSG00000068078.20	9629	chr4:1806685:+	TACC3^ENSG00000013810.20	22456	chr4:1731191:+	INCL_NON_REF_SPLICE	YES	5724	2838	0.00	0.00	GA	1.8892	TG	1.7232	0.0102	1850	0
FGFR3--TACC3	5	0	5.00	0.00	FGFR3^ENSG00000068078.20	8398	chr4:1805454:+	TACC3^ENSG00000013810.20	22517	chr4:1731252:+	INCL_NON_REF_SPLICE	YES	8933	4644	0.00	0.00	GT	1.8295	GG	1.9086	0.0169	1737	0
FGFR3--TACC3	5	0	5.00	0.00	FGFR3^ENSG00000068078.20	8378	chr4:1805434:+	TACC3^ENSG00000013810.20	22515	chr4:1731250:+	INCL_NON_REF_SPLICE	YES	8692	4617	0.00	0.00	GG	1.9329	AG	1.7819	0.0169	1717	0
FGFR3--TACC3	1	13	1.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	23573	chr4:1735279:+	ONLY_REF_SPLICE	YES	3165	5152	0.00	0.00	GT	1.8892	AG	1.3383	0.0034	2000	0
FGFR3--TACC3	4	0	4.00	0.00	FGFR3^ENSG00000068078.20	9554	chr4:1806610:+	TACC3^ENSG00000013810.20	31350	chr4:1744779:+	INCL_NON_REF_SPLICE	YES	7714	7950	0.00	0.00	CT	1.7232	GC	1.6895	0.0135	202	0
FGFR3--TACC3	4	0	4.00	0.00	FGFR3^ENSG00000068078.20	9854	chr4:1806910:+	TACC3^ENSG00000013810.20	24089	chr4:1735795:+	INCL_NON_REF_SPLICE	YES	4128	8594	0.00	0.00	GT	1.8892	CA	1.9656	0.0135	1484	0
FGFR3--TACC3	4	0	4.00	0.00	FGFR3^ENSG00000068078.20	9865	chr4:1806921:+	TACC3^ENSG00000013810.20	25158	chr4:1737270:+	INCL_NON_REF_SPLICE	YES	3908	8206	0.00	0.00	GA	1.7819	AG	1.7465	0.0135	415	0
FGFR3--TACC3	4	0	4.00	0.00	FGFR3^ENSG00000068078.20	9045	chr4:1806101:+	TACC3^ENSG00000013810.20	24090	chr4:1735796:+	INCL_NON_REF_SPLICE	YES	7910	9041	0.00	0.00	GT	1.8256	AG	1.9899	0.0135	1497	0
FGFR3--TACC3	3	3	3.00	0.00	FGFR3^ENSG00000068078.20	9602	chr4:1806658:+	TACC3^ENSG00000013810.20	22519	chr4:1731254:+	INCL_NON_REF_SPLICE	YES	9662	4651	0.00	0.00	AG	1.8062	GC	1.9086	0.0102	1918	0
FGFR3--TACC3	3	0	3.00	0.00	FGFR3^ENSG00000068078.20	9262	chr4:1806318:+	TACC3^ENSG00000013810.20	22432	chr4:1731167:+	INCL_NON_REF_SPLICE	YES	6556	1640	0.00	0.00	GA	1.7819	CC	1.9329	0.0102	1958	0
FGFR3--TACC3	3	0	3.00	0.00	FGFR3^ENSG00000068078.20	9262	chr4:1806318:+	TACC3^ENSG00000013810.20	25125	chr4:1737237:+	INCL_NON_REF_SPLICE	YES	6556	7967	0.00	0.00	GA	1.7819	TG	1.8892	0.0102	621	0
FGFR3--TACC3	3	0	3.00	0.00	FGFR3^ENSG00000068078.20	8831	chr4:1805887:+	TACC3^ENSG00000013810.20	27582	chr4:1739694:+	INCL_NON_REF_SPLICE	YES	7000	8288	0.00	0.00	TG	1.9656	GC	1.8323	0.0102	243	0
FGFR3--TACC3	3	0	3.00	0.00	FGFR3^ENSG00000068078.20	9827	chr4:1806883:+	TACC3^ENSG00000013810.20	24046	chr4:1735752:+	INCL_NON_REF_SPLICE	YES	4106	5995	0.00	0.00	AA	1.8295	GG	1.9329	0.0102	1527	0
FGFR3--TACC3	3	0	3.00	0.00	FGFR3^ENSG00000068078.20	9264	chr4:1806320:+	TACC3^ENSG00000013810.20	22437	chr4:1731172:+	INCL_NON_REF_SPLICE	YES	6551	1802	0.00	0.00	GT	1.7819	AG	1.9086	0.0102	1962	0
FGFR3--TACC3	3	0	3.00	0.00	FGFR3^ENSG00000068078.20	8884	chr4:1805940:+	TACC3^ENSG00000013810.20	22419	chr4:1731154:+	INCL_NON_REF_SPLICE	YES	7008	1464	0.00	0.00	GT	1.9656	GA	1.2729	0.0102	2140	0
BCAR3--GLMN	133	2	133.00	2.00	BCAR3^ENSG00000137936.18	16763	chr1:93642304:-	GLMN^ENSG00000174842.17	35057	chr1:92298029:-	ONLY_REF_SPLICE	YES	635	55	0.21	2.43	GT	1.5656	AG	1.8323	0.4572	2377	0
BCAR3--GLMN	2	0	2.00	0.00	BCAR3^ENSG00000137936.18	16763	chr1:93642304:-	GLMN^ENSG00000174842.17	36683	chr1:92291537:-	ONLY_REF_SPLICE	YES	635	202	0.00	0.01	GT	1.5656	AG	1.8892	0.0068	3355	0
BCAR3--GLMN	1	0	1.00	0.00	BCAR3^ENSG00000137936.18	16763	chr1:93642304:-	GLMN^ENSG00000174842.17	50081	chr1:92247144:-	ONLY_REF_SPLICE	YES	635	186	0.00	0.01	GT	1.5656	AG	1.8892	0.0034	1507	0
BCAR3--GLMN	1	0	1.00	0.00	BCAR3^ENSG00000137936.18	16763	chr1:93642304:-	GLMN^ENSG00000174842.17	37803	chr1:92290306:-	ONLY_REF_SPLICE	YES	635	318	0.00	0.01	GT	1.5656	AG	1.8892	0.0034	3318	0
UBR5--BAALC-AS1	96	0	96.00	0.00	UBR5^ENSG00000104517.13	1586	chr8:102412174:-	BAALC-AS1^ENSG00000247081.8	59210	chr8:103285905:-	INCL_NON_REF_SPLICE	YES	789	0	0.12	97.00	GG	1.8323	TT	1.5329	0.3251	1405	0
UBR5--BAALC-AS1	49	0	49.00	0.00	UBR5^ENSG00000104517.13	1587	chr8:102412173:-	BAALC-AS1^ENSG00000247081.8	59218	chr8:103285897:-	ONLY_REF_SPLICE	YES	767	0	0.07	50.00	GT	1.9086	AG	1.9329	0.1659	1413	0
UBR5--BAALC-AS1	41	0	41.00	0.00	UBR5^ENSG00000104517.13	1587	chr8:102412173:-	BAALC-AS1^ENSG00000247081.8	59213	chr8:103285902:-	ONLY_REF_SPLICE	YES	767	0	0.05	42.00	GT	1.9086	AG	1.8892	0.1388	1408	0
UBR5--BAALC-AS1	13	0	13.00	0.00	UBR5^ENSG00000104517.13	1587	chr8:102412173:-	BAALC-AS1^ENSG00000247081.8	66472	chr8:103246684:-	ONLY_REF_SPLICE	YES	767	0	0.02	14.00	GT	1.9086	AG	1.9086	0.044	807	0
UBR5--BAALC-AS1	5	0	5.00	0.00	UBR5^ENSG00000104517.13	1587	chr8:102412173:-	BAALC-AS1^ENSG00000247081.8	70604	chr8:103234372:-	ONLY_REF_SPLICE	YES	767	0	0.01	6.00	GT	1.9086	AG	1.8323	0.0169	1875	0
UBR5--BAALC-AS1	2	0	2.00	0.00	UBR5^ENSG00000104517.13	1587	chr8:102412173:-	BAALC-AS1^ENSG00000247081.8	75478	chr8:103166296:-	ONLY_REF_SPLICE	YES	767	0	0.00	3.00	GT	1.9086	AG	1.4716	0.0068	386	0
DYRK1A--LINC02756	28	0	28.00	0.00	DYRK1A^ENSG00000157540.22	9241	chr21:37420384:+	LINC02756^ENSG00000255332.8	60188	chr11:91842692:+	ONLY_REF_SPLICE	YES	1393	0	0.02	29.00	GT	1.8892	AG	1.7465	0.0948	3203	0
DYRK1A--LINC02756	10	0	10.00	0.00	DYRK1A^ENSG00000157540.22	9241	chr21:37420384:+	LINC02756^ENSG00000255332.8	62471	chr11:91851220:+	ONLY_REF_SPLICE	YES	1393	0	0.01	11.00	GT	1.8892	AG	1.7819	0.0339	2110	0
DYRK1A--LINC02756	3	0	3.00	0.00	DYRK1A^ENSG00000157540.22	9241	chr21:37420384:+	LINC02756^ENSG00000255332.8	63652	chr11:91855969:+	ONLY_REF_SPLICE	YES	1393	0	0.00	4.00	GT	1.8892	AG	1.9219	0.0102	2349	0
DYRK1A--LINC02756	2	0	2.00	0.00	DYRK1A^ENSG00000157540.22	9241	chr21:37420384:+	LINC02756^ENSG00000255332.8	56807	chr11:91812115:+	ONLY_REF_SPLICE	YES	1393	0	0.00	3.00	GT	1.8892	AG	1.7465	0.0068	2171	0
DYRK1A--LINC02756	2	0	2.00	0.00	DYRK1A^ENSG00000157540.22	9241	chr21:37420384:+	LINC02756^ENSG00000255332.8	59086	chr11:91841585:+	ONLY_REF_SPLICE	YES	1393	0	0.00	3.00	GT	1.8892	AG	1.6895	0.0068	3204	0
DYRK1A--LINC02756	1	0	1.00	0.00	DYRK1A^ENSG00000157540.22	3056	chr21:37367628:+	LINC02756^ENSG00000255332.8	63652	chr11:91855969:+	ONLY_REF_SPLICE	YES	925	0	0.00	2.00	GT	1.5546	AG	1.9219	0.0034	2526	0
DYRK1A--LINC02756	1	0	1.00	0.00	DYRK1A^ENSG00000157540.22	13600	chr21:37430400:+	LINC02756^ENSG00000255332.8	63652	chr11:91855969:+	ONLY_REF_SPLICE	YES	909	0	0.00	2.00	GT	1.9899	AG	1.9219	0.0034	2473	0
MTAP--DMRTA1	21	0	21.00	0.00	MTAP^ENSG00000099810.21	7463	chr9:21818202:+	DMRTA1^ENSG00000176399.4	31605	chr9:22451064:+	ONLY_REF_SPLICE	YES	148	51	0.15	0.42	GT	1.9656	AG	1.3753	0.0711	669	0
AL669831.4--SEPTIN14	16	0	16.00	0.00	AL669831.4^ENSG00000230092.7	4587	chr1:805799:-	SEPTIN14^ENSG00000154997.9	19871	chr7:55796092:-	ONLY_REF_SPLICE	YES	22	30	0.74	0.55	GT	1.7819	AG	1.9899	0.0542	1425	0
MTAP--LINC01239	14	0	14.00	0.00	MTAP^ENSG00000099810.21	7463	chr9:21818202:+	LINC01239^ENSG00000234840.2	30793	chr9:22674443:+	ONLY_REF_SPLICE	YES	148	0	0.10	15.00	GT	1.9656	AG	1.9656	0.0474	3965	0
FAM172A--NR2F1-AS1	8	0	8.00	0.00	FAM172A^ENSG00000113391.19	12880	chr5:93776159:-	NR2F1-AS1^ENSG00000237187.9	61720	chr5:93411509:-	ONLY_REF_SPLICE	YES	343	0	0.03	9.00	GT	1.8323	AG	1.9329	0.0271	1552	0
FAM172A--NR2F1-AS1	4	0	4.00	0.00	FAM172A^ENSG00000113391.19	12880	chr5:93776159:-	NR2F1-AS1^ENSG00000237187.9	53002	chr5:93438741:-	ONLY_REF_SPLICE	YES	343	0	0.01	5.00	GT	1.8323	AG	1.8892	0.0135	1192	0
FAM172A--NR2F1-AS1	1	0	1.00	0.00	FAM172A^ENSG00000113391.19	12880	chr5:93776159:-	NR2F1-AS1^ENSG00000237187.9	57335	chr5:93432460:-	ONLY_REF_SPLICE	YES	343	0	0.01	2.00	GT	1.8323	AG	1.8892	0.0034	1212	0
FAM172A--NR2F1-AS1	1	0	1.00	0.00	FAM172A^ENSG00000113391.19	12880	chr5:93776159:-	NR2F1-AS1^ENSG00000237187.9	46455	chr5:93501160:-	ONLY_REF_SPLICE	YES	343	0	0.01	2.00	GT	1.8323	AG	1.6402	0.0034	1773	0