File Info
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- 659_Dd-T1-TRNA-1_B23MHV2LT4_1.fusions.csv
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- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/fusionreport/659_Dd-T1-TRNA-1_B23MHV2LT4_1/659_Dd-T1-TRNA-1_B23MHV2LT4_1.fusions.csv
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- dev_rna_exp09_10-3b7a596a
- Published
- Jun 04, 2026 4:28 PM
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| FGFR3--TACC3 | COSMIC,Mitelman,FusionGDB2 | 0.625 | 0.5 * (0.125 + 0.125) + 0.5 * (0.500 + 0.500 + 0.000) | position: chr4:1806934#chr4:1739702,reading-frame: in-frame,type: duplication,split_reads1: 313,split_reads2: 302,discordant_mates: 300,coverage1: 18588,coverage2: 28338,confidence: high | position: chr4:1806934:+#chr4:1739702:+,junction_reads: 6186,spanning_reads: 331,ffmp: 22.0477 |
| TLK2--AC240565.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr17:106864:-,junction_reads: 16,spanning_reads: 0,ffmp: 0.016 | ||
| STX16--NPEPL1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr20:58673711#chr20:58691724,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 54,discordant_mates: 7,coverage1: 2977,coverage2: 351,confidence: high | position: chr20:58673711:+#chr20:58691724:+,junction_reads: 14,spanning_reads: 0,ffmp: 0.0474 | |
| AGAP12P--FRMPD2 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr10:48025897#chr10:48181008,reading-frame: .,type: duplication,split_reads1: 7,split_reads2: 0,discordant_mates: 2,coverage1: 1988,coverage2: 30,confidence: high | position: chr10:48025897:-#chr10:48181008:-,junction_reads: 10,spanning_reads: 2,ffmp: 0.0285 | |
| MRPS16--CFAP70 | Mitelman | 0.312 | 0.5 * (0.125) + 0.5 * (0.500) | position: chr10:73250923#chr10:73256415,reading-frame: in-frame,type: duplication,split_reads1: 145,split_reads2: 105,discordant_mates: 0,coverage1: 4719,coverage2: 1110,confidence: high | |
| PCDHGB2--PCDHGA8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 87,split_reads2: 43,discordant_mates: 0,coverage1: 254,coverage2: 6096,confidence: high | ||
| PCDHGB2--PCDHGC4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 87,split_reads2: 43,discordant_mates: 0,coverage1: 254,coverage2: 6096,confidence: high | ||
| PCDHGB2--PCDHGA11 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 87,split_reads2: 43,discordant_mates: 0,coverage1: 254,coverage2: 6096,confidence: high | ||
| PCDHGB2--PCDHGA10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 87,split_reads2: 43,discordant_mates: 0,coverage1: 254,coverage2: 6096,confidence: high | ||
| PCDHGB2--PCDHGC5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 87,split_reads2: 43,discordant_mates: 0,coverage1: 254,coverage2: 6096,confidence: high | ||
| PCDHGB2--PCDHGB6 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 87,split_reads2: 43,discordant_mates: 0,coverage1: 254,coverage2: 6096,confidence: high | ||
| PCDHGB2--PCDHGB7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 87,split_reads2: 43,discordant_mates: 0,coverage1: 254,coverage2: 6096,confidence: high | ||
| PCDHGB2--PCDHGC3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 87,split_reads2: 43,discordant_mates: 0,coverage1: 254,coverage2: 6096,confidence: high | ||
| PCDHGB2--PCDHGA12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 87,split_reads2: 43,discordant_mates: 0,coverage1: 254,coverage2: 6096,confidence: high | ||
| PCDHGB2--PCDHGA9 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 87,split_reads2: 43,discordant_mates: 0,coverage1: 254,coverage2: 6096,confidence: high | ||
| SYNPO2--SYNPO2 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr4:119032027#chr4:119029845,reading-frame: out-of-frame,type: duplication/non-canonical_splicing,split_reads1: 81,split_reads2: 37,discordant_mates: 1,coverage1: 782,coverage2: 414,confidence: high | |
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15540433#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 70,split_reads2: 38,discordant_mates: 2,coverage1: 2181,coverage2: 395,confidence: high | |
| PCDHA10--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 35,split_reads2: 61,discordant_mates: 6,coverage1: 287,coverage2: 650,confidence: high | ||
| PCDHA10--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 35,split_reads2: 61,discordant_mates: 6,coverage1: 287,coverage2: 650,confidence: high | ||
| PCDHA10--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 35,split_reads2: 61,discordant_mates: 6,coverage1: 287,coverage2: 650,confidence: high | ||
| TMED7--TICAM2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:115616318#chr5:115581315,reading-frame: stop-codon,type: deletion/read-through,split_reads1: 33,split_reads2: 57,discordant_mates: 11,coverage1: 3549,coverage2: 507,confidence: high | ||
| AC015911.9--SLFN12L | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:35522279#chr17:35480195,reading-frame: .,type: deletion/read-through,split_reads1: 20,split_reads2: 39,discordant_mates: 15,coverage1: 797,coverage2: 322,confidence: high | ||
| AC092807.3--DDAH1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:85496166#chr1:85358847,reading-frame: .,type: deletion/read-through,split_reads1: 23,split_reads2: 50,discordant_mates: 0,coverage1: 93,coverage2: 1054,confidence: high | ||
| PCDHA6--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140830485#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 21,split_reads2: 49,discordant_mates: 1,coverage1: 128,coverage2: 650,confidence: high | ||
| PCDHA6--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140830485#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 21,split_reads2: 49,discordant_mates: 1,coverage1: 128,coverage2: 650,confidence: high | ||
| PCDHA6--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140830485#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 21,split_reads2: 49,discordant_mates: 1,coverage1: 128,coverage2: 650,confidence: high | ||
| ANK3--AC036101.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr10:60196145#chr10:53337295,reading-frame: out-of-frame,type: deletion,split_reads1: 13,split_reads2: 5,discordant_mates: 0,coverage1: 825,coverage2: 14,confidence: high | ||
| ANK3--RNA5SP318 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr10:60196145#chr10:53337295,reading-frame: out-of-frame,type: deletion,split_reads1: 13,split_reads2: 5,discordant_mates: 0,coverage1: 825,coverage2: 14,confidence: high | ||
| KLRC4--KLRK1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr12:10407636#chr12:10388875,reading-frame: stop-codon,type: deletion/read-through,split_reads1: 8,split_reads2: 7,discordant_mates: 3,coverage1: 86,coverage2: 171,confidence: high | ||
| AP001347.1--ANKRD20A11P | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr21:14027597#chr21:13970110,reading-frame: .,type: inversion,split_reads1: 13,split_reads2: 1,discordant_mates: 1,coverage1: 213,coverage2: 14,confidence: high | ||
| SOGA3--KIAA0408 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr6:127473080#chr6:127454101,reading-frame: .,type: deletion/read-through,split_reads1: 0,split_reads2: 13,discordant_mates: 1,coverage1: 29,coverage2: 37,confidence: high | ||
| PDXDC1--NPIPB5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr16:15030056#chr16:22513522,reading-frame: out-of-frame,type: deletion,split_reads1: 0,split_reads2: 4,discordant_mates: 5,coverage1: 3786,coverage2: 722,confidence: high |
33 rows