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659_ePR-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/fusioninspector/659_ePR-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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5.1 KB
Workflow Run
dev_rna_exp09_10-3b7a596a
Published
Jun 04, 2026 4:29 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
TPM3--NTRK1 2748 11 2748.00 10.91 TPM3^ENSG00000143549.21 13389 chr1:154170400:- NTRK1^ENSG00000198400.13 42070 chr1:156874571:+ ONLY_REF_SPLICE YES 1795 73 1.54 37.30 GT 1.9329 AG 1.6895 9.3234 355 0
TPM3--NTRK1 23 11 23.00 0.09 TPM3^ENSG00000143549.21 14484 chr1:154169305:- NTRK1^ENSG00000198400.13 42070 chr1:156874571:+ ONLY_REF_SPLICE YES 1729 73 0.02 0.47 GT 1.9329 AG 1.6895 0.078 1158 0
PCDHGA3--PCDHGB6 456 2 91.20 0.40 PCDHGA3^ENSG00000254245.3 3629 chr5:141346457:+ PCDHGB6^ENSG00000253305.2 12297 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 149 459.00 3.06 GT 1.8062 AG 1.3383 0.3096 1056 0
PCDHGA3--PCDHGB7 456 2 91.20 0.40 PCDHGA3^ENSG00000254245.3 3629 chr5:141346457:+ PCDHGB7^ENSG00000254122.3 10481 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 92 459.00 4.94 GT 1.8062 AG 1.3383 0.3096 1525 0
PCDHGA3--PCDHGC3 456 2 91.20 0.40 PCDHGA3^ENSG00000254245.3 3629 chr5:141346457:+ PCDHGC3^ENSG00000240184.7 10545 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 366 459.00 1.25 GT 1.8062 AG 1.3383 0.3096 2429 0
PCDHGA3--PCDHGC4 456 2 91.20 0.40 PCDHGA3^ENSG00000254245.3 3629 chr5:141346457:+ PCDHGC4^ENSG00000242419.5 10489 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 8 459.00 51.00 GT 1.8062 AG 1.3383 0.3096 1445 0
PCDHGA3--PCDHGC5 456 2 91.20 0.40 PCDHGA3^ENSG00000254245.3 3629 chr5:141346457:+ PCDHGC5^ENSG00000240764.4 10545 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 14 459.00 30.60 GT 1.8062 AG 1.3383 0.3096 1075 0
TVP23C--CDRT4 235 0 235.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 137 11 1.71 19.67 GT 1.9329 AG 1.9899 0.7942 1215 0
TVP23C--CDRT4 71 0 71.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 232 11 0.31 6.00 GT 1.9086 AG 1.9899 0.2399 1774 0
TVP23C--CDRT4 50 0 50.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 137 62 0.37 0.81 GT 1.9329 AG 1.6402 0.169 137 0
TVP23C--CDRT4 19 0 19.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 232 62 0.09 0.32 GT 1.9086 AG 1.6402 0.0642 697 0
TVP23C--CDRT4 9 0 9.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 61 11 0.16 0.83 GT 1.8892 AG 1.9899 0.0304 1949 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 61 62 0.05 0.05 GT 1.8892 AG 1.6402 0.0068 873 0
PCDHGB3--PCDHGC4 135 0 135.00 0.00 PCDHGB3^ENSG00000262209.3 3415 chr5:141372809:+ PCDHGC4^ENSG00000242419.5 10239 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 8 136.00 15.11 GT 1.8892 AG 1.3383 0.4562 1515 0
PCDHA10--PCDHAC1 104 1 52.00 0.50 PCDHA10^ENSG00000250120.8 3554 chr5:140858436:+ PCDHAC1^ENSG00000248383.5 21506 chr5:140978949:+ INCL_NON_REF_SPLICE YES 18 26 5.58 3.93 GT 1.9329 AG 1.3996 0.1774 1105 0
PCDHA10--PCDHAC1 10 0 5.00 0.00 PCDHA10^ENSG00000250120.8 2765 chr5:140857647:+ PCDHAC1^ENSG00000248383.5 21506 chr5:140978949:+ INCL_NON_REF_SPLICE YES 64 26 0.17 0.41 GT 1.9656 AG 1.3996 0.0169 1292 0
PCDHA10--PCDHAC2 104 1 52.00 0.50 PCDHA10^ENSG00000250120.8 3554 chr5:140858436:+ PCDHAC2^ENSG00000243232.6 20370 chr5:140978949:+ INCL_NON_REF_SPLICE YES 18 129 5.58 0.82 GT 1.9329 AG 1.3996 0.1774 1235 0
PCDHA10--PCDHAC2 10 0 5.00 0.00 PCDHA10^ENSG00000250120.8 2765 chr5:140857647:+ PCDHAC2^ENSG00000243232.6 20370 chr5:140978949:+ INCL_NON_REF_SPLICE YES 64 129 0.17 0.08 GT 1.9656 AG 1.3996 0.0169 1404 0
STX16--NPEPL1 89 2 89.00 2.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 628 33 0.15 2.71 GT 1.7968 AG 1.8256 0.3076 1940 0
STX16--NPEPL1 1 0 1.00 0.00 STX16^ENSG00000124222.22 7080 chr20:58670603:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 588 33 0.00 0.06 GT 1.9086 AG 1.8256 0.0034 2386 0
STX16--NPEPL1 1 0 1.00 0.00 STX16^ENSG00000124222.22 1835 chr20:58652087:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 842 33 0.00 0.06 GT 1.9899 AG 1.8256 0.0034 1258 0
TLK2--AC240565.1 70 0 70.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 357 37 0.20 1.87 GT 1.8892 AG 1.8892 0.2366 1734 0
AC096555.1--PCSK2 17 0 17.00 0.00 AC096555.1^ENSG00000286152.1 2446 chr2:184057832:- PCSK2^ENSG00000125851.10 15954 chr20:17409263:+ ONLY_REF_SPLICE YES 0 3541 18.00 0.01 GT 1.9656 AG 1.8892 0.0574 4422 0
ERBB4--AC093865.1 6 0 6.00 0.00 ERBB4^ENSG00000178568.15 1393 chr2:212538449:- AC093865.1^ENSG00000273118.1 50462 chr2:212581408:- ONLY_REF_SPLICE YES 447 0 0.02 7.00 GT 1.9899 AG 1.7968 0.0203 2446 0
25 rows