File Info
- Filename
- 659_SP-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/fusioninspector/659_SP-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
- Size
- 7.0 KB
- Workflow Run
- dev_rna_exp09_10-3b7a596a
- Published
- Jun 04, 2026 4:29 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| ETV6--NTRK3 | 2086 | 8 | 2086.00 | 7.98 | ETV6^ENSG00000139083.11 | 9691 | chr12:11853561:+ | NTRK3^ENSG00000140538.16 | 40814 | chr15:88033045:- | ONLY_REF_SPLICE | YES | 726 | 356 | 2.88 | 5.87 | GT | 1.6402 | AG | 1.8256 | 7.0658 | 1246 | 0 |
| ETV6--NTRK3 | 6 | 1 | 6.00 | 0.00 | ETV6^ENSG00000139083.11 | 7148 | chr12:11839304:+ | NTRK3^ENSG00000140538.16 | 40814 | chr15:88033045:- | ONLY_REF_SPLICE | YES | 1475 | 356 | 0.01 | 0.02 | GT | 1.9086 | AG | 1.8256 | 0.0202 | 1307 | 0 |
| ETV6--NTRK3 | 3 | 8 | 3.00 | 0.01 | ETV6^ENSG00000139083.11 | 9779 | chr12:11853649:+ | NTRK3^ENSG00000140538.16 | 40814 | chr15:88033045:- | INCL_NON_REF_SPLICE | YES | 682 | 356 | 0.02 | 0.03 | GT | 1.5301 | AG | 1.8256 | 0.0101 | 1333 | 0 |
| ETV6--NTRK3 | 4 | 4 | 4.00 | 0.01 | ETV6^ENSG00000139083.11 | 9693 | chr12:11853563:+ | NTRK3^ENSG00000140538.16 | 40817 | chr15:88033042:- | INCL_NON_REF_SPLICE | NO | 715 | 392 | 0.01 | 0.02 | AC | 1.7968 | TC | 1.9329 | 0.0135 | 1247 | 0 |
| ETV6--NTRK3 | 1 | 0 | 1.00 | 0.00 | ETV6^ENSG00000139083.11 | 1487 | chr12:11650160:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1750 | 166 | 0.00 | 0.01 | GT | 1.9329 | AG | 1.9656 | 0.0034 | 326 | 0 |
| PCDHGA3--PCDHGB6 | 507 | 0 | 507.00 | 0.00 | PCDHGA3^ENSG00000254245.3 | 3629 | chr5:141346457:+ | PCDHGB6^ENSG00000253305.2 | 12297 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 60 | 508.00 | 8.33 | GT | 1.8062 | AG | 1.3383 | 1.7108 | 1056 | 0 |
| TVP23C--CDRT4 | 255 | 1 | 255.00 | 1.00 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | INCL_NON_REF_SPLICE | YES | 166 | 26 | 1.54 | 9.52 | GT | 1.9329 | AG | 1.9899 | 0.8639 | 1215 | 0 |
| TVP23C--CDRT4 | 81 | 0 | 81.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 677 | 26 | 0.12 | 3.04 | GT | 1.8323 | AG | 1.9899 | 0.2733 | 2126 | 0 |
| TVP23C--CDRT4 | 50 | 0 | 50.00 | 0.00 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | INCL_NON_REF_SPLICE | YES | 166 | 102 | 0.31 | 0.50 | GT | 1.9329 | AG | 1.6402 | 0.1687 | 137 | 0 |
| TVP23C--CDRT4 | 24 | 0 | 24.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 677 | 102 | 0.04 | 0.24 | GT | 1.8323 | AG | 1.6402 | 0.081 | 1363 | 0 |
| TVP23C--CDRT4 | 19 | 0 | 19.00 | 0.00 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 26 | 26 | 0.74 | 0.74 | GT | 1.8892 | AG | 1.9899 | 0.0641 | 1949 | 0 |
| TVP23C--CDRT4 | 1 | 0 | 1.00 | 0.00 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 26 | 102 | 0.07 | 0.02 | GT | 1.8892 | AG | 1.6402 | 0.0034 | 873 | 0 |
| TVP23C--CDRT4 | 1 | 0 | 1.00 | 0.00 | TVP23C^ENSG00000175106.17 | 6853 | chr17:15545785:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 494 | 26 | 0.00 | 0.07 | GT | 1.9086 | AG | 1.9899 | 0.0034 | 1774 | 0 |
| PCDHGB2--PCDHGA10 | 196 | 0 | 24.50 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA10^ENSG00000253846.2 | 12051 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 105 | 197.00 | 1.86 | GT | 1.7819 | AG | 1.3383 | 0.0827 | 1890 | 0 |
| PCDHGB2--PCDHGA11 | 196 | 0 | 24.50 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA11^ENSG00000253873.6 | 11222 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 27 | 197.00 | 7.04 | GT | 1.7819 | AG | 1.3383 | 0.0827 | 1018 | 0 |
| PCDHGB2--PCDHGA12 | 196 | 0 | 24.50 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA12^ENSG00000253159.3 | 10305 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 60 | 197.00 | 3.23 | GT | 1.7819 | AG | 1.3383 | 0.0827 | 1413 | 0 |
| PCDHGB2--PCDHGA8 | 196 | 0 | 24.50 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA8^ENSG00000253767.3 | 14069 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 30 | 197.00 | 6.35 | GT | 1.7819 | AG | 1.3383 | 0.0827 | 1419 | 0 |
| PCDHGB2--PCDHGA9 | 196 | 0 | 24.50 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA9^ENSG00000261934.2 | 10157 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 65 | 197.00 | 2.98 | GT | 1.7819 | AG | 1.3383 | 0.0827 | 1493 | 0 |
| PCDHGB2--PCDHGC3 | 196 | 0 | 24.50 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC3^ENSG00000240184.7 | 10438 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 335 | 197.00 | 0.59 | GT | 1.7819 | AG | 1.3383 | 0.0827 | 1210 | 0 |
| PCDHGB2--PCDHGC4 | 196 | 0 | 24.50 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC4^ENSG00000242419.5 | 10382 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 8 | 197.00 | 21.89 | GT | 1.7819 | AG | 1.3383 | 0.0827 | 1585 | 0 |
| PCDHGB2--PCDHGC5 | 196 | 0 | 24.50 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC5^ENSG00000240764.4 | 10438 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 12 | 197.00 | 15.15 | GT | 1.7819 | AG | 1.3383 | 0.0827 | 1206 | 0 |
| NTRK3--ETV6 | 159 | 0 | 159.00 | 0.00 | NTRK3^ENSG00000140538.16 | 15674 | chr15:88126271:- | ETV6^ENSG00000139083.11 | 68280 | chr12:11869424:+ | ONLY_REF_SPLICE | YES | 259 | 754 | 0.62 | 0.21 | GT | 1.5656 | AG | 1.9656 | 0.5365 | 2887 | 0 |
| NTRK3--ETV6 | 1 | 0 | 1.00 | 0.00 | NTRK3^ENSG00000140538.16 | 20084 | chr15:88032857:- | ETV6^ENSG00000139083.11 | 67145 | chr12:11853427:+ | ONLY_REF_SPLICE | YES | 305 | 1461 | 0.01 | 0.00 | GT | 1.8256 | AG | 1.8323 | 0.0034 | 1102 | 0 |
| TLK2--AC240565.1 | 157 | 0 | 157.00 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 444 | 27 | 0.36 | 5.64 | GT | 1.8892 | AG | 1.8892 | 0.5298 | 1734 | 0 |
| PCDHA10--PCDHAC1 | 155 | 1 | 77.50 | 0.50 | PCDHA10^ENSG00000250120.8 | 3554 | chr5:140858436:+ | PCDHAC1^ENSG00000248383.5 | 21506 | chr5:140978949:+ | INCL_NON_REF_SPLICE | YES | 130 | 59 | 1.20 | 2.62 | GT | 1.9329 | AG | 1.3996 | 0.2632 | 1105 | 0 |
| PCDHA10--PCDHAC2 | 155 | 1 | 77.50 | 0.50 | PCDHA10^ENSG00000250120.8 | 3554 | chr5:140858436:+ | PCDHAC2^ENSG00000243232.6 | 20370 | chr5:140978949:+ | INCL_NON_REF_SPLICE | YES | 130 | 172 | 1.20 | 0.91 | GT | 1.9329 | AG | 1.3996 | 0.2632 | 1235 | 0 |
| AC015911.9--SLFN12L | 127 | 3 | 127.00 | 3.00 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000205045.11 | 6142 | chr17:35480195:- | ONLY_REF_SPLICE | YES | 0 | 135 | 131.00 | 0.96 | GT | 1.9329 | AG | 1.8892 | 0.4386 | 533 | 0 |
| AC015911.9--SLFN12L | 51 | 0 | 51.00 | 0.00 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000286065.2 | 8152 | chr17:35478185:- | ONLY_REF_SPLICE | YES | 0 | 205 | 52.00 | 0.25 | GT | 1.9329 | AG | 1.9329 | 0.1721 | 1380 | 0 |
| AC015911.9--SLFN12L | 2 | 0 | 2.00 | 0.00 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000205045.11 | 9263 | chr17:35475485:- | ONLY_REF_SPLICE | YES | 0 | 207 | 3.00 | 0.01 | GT | 1.9329 | AG | 1.7968 | 0.0067 | 508 | 0 |
| AC015911.9--SLFN12L | 1 | 0 | 1.00 | 0.00 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000205045.11 | 12141 | chr17:35464581:- | ONLY_REF_SPLICE | YES | 0 | 1 | 2.00 | 1.00 | GT | 1.9329 | AG | 1.8323 | 0.0034 | 2111 | 0 |
| KLRC4--KLRK1 | 24 | 1 | 24.00 | 0.80 | KLRC4^ENSG00000183542.5 | 3122 | chr12:10407636:- | KLRK1^ENSG00000213809.9 | 8583 | chr12:10388875:- | INCL_NON_REF_SPLICE | YES | 26 | 68 | 0.96 | 0.38 | GT | 1.3996 | AG | 1.9219 | 0.0837 | 1207 | 0 |
| KLRC4--KLRK1 | 3 | 1 | 3.00 | 0.10 | KLRC4^ENSG00000183542.5 | 3122 | chr12:10407636:- | KLRK1^ENSG00000213809.9 | 7431 | chr12:10390027:- | INCL_NON_REF_SPLICE | YES | 26 | 7 | 0.19 | 0.62 | GT | 1.3996 | AG | 1.8323 | 0.0104 | 2359 | 0 |
| KLRC4--KLRK1 | 3 | 1 | 3.00 | 0.10 | KLRC4^ENSG00000183542.5 | 3122 | chr12:10407636:- | KLRK1^ENSG00000213809.9 | 6360 | chr12:10391891:- | INCL_NON_REF_SPLICE | YES | 26 | 0 | 0.19 | 5.00 | GT | 1.3996 | AG | 1.6895 | 0.0104 | 3430 | 0 |
| VLDLR-AS1--SLC4A5 | 13 | 0 | 13.00 | 0.00 | VLDLR-AS1^ENSG00000236404.10 | 18978 | chr9:2494180:- | SLC4A5^ENSG00000188687.17 | 41526 | chr2:74262232:- | ONLY_REF_SPLICE | YES | 0 | 2150 | 14.00 | 0.01 | GT | 1.9329 | AG | 1.8295 | 0.0439 | 1417 | 0 |
35 rows