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659_cIX-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/fusioninspector/659_cIX-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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10.3 KB
Workflow Run
dev_rna_exp09_10-3b7a596a
Published
Jun 04, 2026 4:34 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
TNS1--ALK 4262 57 4262.00 57.00 TNS1^ENSG00000079308.19 33935 chr2:217847510:- ALK^ENSG00000171094.18 74672 chr2:29251267:- ONLY_REF_SPLICE YES 3314 110 1.30 38.92 GT 1.8256 AG 1.8295 14.5776 361 0
TNS1--ALK 4 0 4.00 0.00 TNS1^ENSG00000079308.19 32755 chr2:217848690:- ALK^ENSG00000171094.18 74672 chr2:29251267:- INCL_NON_REF_SPLICE YES 3601 110 0.00 0.05 GT 1.8892 AG 1.8295 0.0135 333 0
TNS1--ALK 3 0 3.00 0.00 TNS1^ENSG00000079308.19 33826 chr2:217847619:- ALK^ENSG00000171094.18 74716 chr2:29251223:- INCL_NON_REF_SPLICE YES 3485 618 0.00 0.01 CT 1.4566 GC 1.4566 0.0101 244 0
TNS1--ALK 2 0 2.00 0.00 TNS1^ENSG00000079308.19 27926 chr2:217880898:- ALK^ENSG00000171094.18 74672 chr2:29251267:- ONLY_REF_SPLICE YES 3577 110 0.00 0.03 GT 1.7968 AG 1.8295 0.0068 1226 0
TNS1--ALK 1 1 1.00 0.00 TNS1^ENSG00000079308.19 33935 chr2:217847510:- ALK^ENSG00000171094.18 75835 chr2:29239830:- ONLY_REF_SPLICE YES 3314 1989 0.00 0.00 GT 1.8256 AG 1.9086 0.0034 1082 0
PCDHGB2--PCDHGA10 459 0 57.38 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 29 460.00 15.33 GT 1.7819 AG 1.3383 0.1937 1890 0
PCDHGB2--PCDHGA11 459 0 57.38 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 26 460.00 17.04 GT 1.7819 AG 1.3383 0.1937 1018 0
PCDHGB2--PCDHGA12 459 0 57.38 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 37 460.00 12.11 GT 1.7819 AG 1.3383 0.1937 1413 0
PCDHGB2--PCDHGA8 459 0 57.38 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 8 460.00 51.11 GT 1.7819 AG 1.3383 0.1937 1419 0
PCDHGB2--PCDHGA9 459 0 57.38 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 43 460.00 10.45 GT 1.7819 AG 1.3383 0.1937 1493 0
PCDHGB2--PCDHGC3 459 0 57.38 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 1363 460.00 0.34 GT 1.7819 AG 1.3383 0.1937 1210 0
PCDHGB2--PCDHGC4 459 0 57.38 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 3 460.00 115.00 GT 1.7819 AG 1.3383 0.1937 1585 0
PCDHGB2--PCDHGC5 459 0 57.38 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 115 460.00 3.97 GT 1.7819 AG 1.3383 0.1937 1206 0
PCDHA6--PCDHAC1 419 6 209.50 3.00 PCDHA6^ENSG00000081842.18 3528 chr5:140830485:+ PCDHAC1^ENSG00000248383.5 12415 chr5:140978949:+ INCL_NON_REF_SPLICE YES 42 77 9.91 5.46 GT 1.9219 AG 1.3996 0.7172 1175 0
PCDHA6--PCDHAC1 21 0 10.50 0.00 PCDHA6^ENSG00000081842.18 2736 chr5:140829693:+ PCDHAC1^ENSG00000248383.5 12415 chr5:140978949:+ INCL_NON_REF_SPLICE YES 286 77 0.08 0.28 GT 1.9329 AG 1.3996 0.0354 1433 0
PCDHA6--PCDHAC2 419 6 209.50 3.00 PCDHA6^ENSG00000081842.18 3528 chr5:140830485:+ PCDHAC2^ENSG00000243232.6 11279 chr5:140978949:+ INCL_NON_REF_SPLICE YES 42 140 9.91 3.02 GT 1.9219 AG 1.3996 0.7172 1069 0
PCDHA6--PCDHAC2 21 0 10.50 0.00 PCDHA6^ENSG00000081842.18 2736 chr5:140829693:+ PCDHAC2^ENSG00000243232.6 11279 chr5:140978949:+ INCL_NON_REF_SPLICE YES 286 140 0.08 0.16 GT 1.9329 AG 1.3996 0.0354 1106 0
TNFAIP8L3--CYP19A1 301 1 301.00 1.00 TNFAIP8L3^ENSG00000183578.8 2635 chr15:51094544:- CYP19A1^ENSG00000137869.15 19564 chr15:51242950:- ONLY_REF_SPLICE YES 3107 14 0.10 20.20 GT 1.6895 AG 1.9329 1.0193 1171 0
AC092807.3--DDAH1 241 4 241.00 3.68 AC092807.3^ENSG00000282057.1 5553 chr1:85496166:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 90 246.00 2.70 GT 1.5628 AG 1.8062 0.8258 3011 0
AC092807.3--DDAH1 70 1 70.00 0.22 AC092807.3^ENSG00000282057.1 1267 chr1:85577984:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 1 90 36.00 0.79 GT 1.8062 AG 1.8062 0.237 2484 0
AC092807.3--DDAH1 6 4 6.00 0.09 AC092807.3^ENSG00000282057.1 9402 chr1:85488291:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 90 11.00 0.12 GT 1.8892 AG 1.8062 0.0206 2892 0
AC092807.3--DDAH1 5 1 5.00 0.02 AC092807.3^ENSG00000282057.1 3294 chr1:85575832:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 1 90 3.50 0.08 GT 1.6895 AG 1.8062 0.017 3244 0
ARHGAP1--AC068051.1 79 0 79.00 0.00 ARHGAP1^ENSG00000175220.12 5647 chr11:46688173:- AC068051.1^ENSG00000197585.10 21650 chr2:214436317:- ONLY_REF_SPLICE YES 2216 0 0.04 80.00 GT 1.9086 AG 1.9219 0.2666 1262 0
ARHGAP1--AC068051.1 34 1 34.00 0.85 ARHGAP1^ENSG00000175220.12 5647 chr11:46688173:- AC068051.1^ENSG00000197585.10 19491 chr2:214473769:- ONLY_REF_SPLICE YES 2216 0 0.02 36.00 GT 1.9086 AG 1.9656 0.1177 3298 0
ARHGAP1--AC068051.1 4 3 4.00 2.15 ARHGAP1^ENSG00000175220.12 5647 chr11:46688173:- AC068051.1^ENSG00000197585.10 18296 chr2:214494650:- INCL_NON_REF_SPLICE YES 2216 0 0.00 8.00 GT 1.9086 AG 1.8892 0.0208 2531 0
TLK2--AC240565.1 58 0 58.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 676 16 0.09 3.47 GT 1.8892 AG 1.8892 0.1958 1734 0
CBLB--KCNAB1 54 1 54.00 0.98 CBLB^ENSG00000114423.23 7648 chr3:105776396:- KCNAB1^ENSG00000169282.18 47956 chr3:156421616:+ ONLY_REF_SPLICE YES 423 105 0.13 0.53 GT 1.8062 AG 1.8892 0.1856 1735 0
CBLB--KCNAB1 1 1 1.00 0.02 CBLB^ENSG00000114423.23 10084 chr3:105751462:- KCNAB1^ENSG00000169282.18 47956 chr3:156421616:+ ONLY_REF_SPLICE YES 493 105 0.01 0.03 GT 1.9899 AG 1.8892 0.0035 1839 0
TVP23C--CDRT4 52 0 52.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 90 6 0.58 7.57 GT 1.9329 AG 1.9899 0.1755 1215 0
TVP23C--CDRT4 24 0 24.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 649 6 0.04 3.57 GT 1.8323 AG 1.9899 0.081 2126 0
TVP23C--CDRT4 17 0 17.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 220 6 0.08 2.57 GT 1.9086 AG 1.9899 0.0574 1774 0
TVP23C--CDRT4 13 0 13.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 90 20 0.15 0.67 GT 1.9329 AG 1.6402 0.0439 137 0
TVP23C--CDRT4 9 0 9.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 649 20 0.02 0.48 GT 1.8323 AG 1.6402 0.0304 1363 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 220 20 0.02 0.24 GT 1.9086 AG 1.6402 0.0135 697 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 26 6 0.19 0.71 GT 1.8892 AG 1.9899 0.0135 1949 0
AMBRA1--BARD1 44 3 44.00 2.94 AMBRA1^ENSG00000110497.14 25816 chr11:46408513:- BARD1^ENSG00000138376.11 32619 chr2:214797117:- ONLY_REF_SPLICE YES 385 200 0.12 0.24 GT 1.9219 AG 1.9086 0.1584 1909 0
AMBRA1--BARD1 2 1 2.00 0.04 AMBRA1^ENSG00000110497.14 23529 chr11:46417913:- BARD1^ENSG00000138376.11 32619 chr2:214797117:- ONLY_REF_SPLICE YES 291 200 0.01 0.02 GT 1.9329 AG 1.9086 0.0069 2766 0
AMBRA1--BARD1 1 1 1.00 0.02 AMBRA1^ENSG00000110497.14 22389 chr11:46433474:- BARD1^ENSG00000138376.11 32619 chr2:214797117:- ONLY_REF_SPLICE YES 251 200 0.01 0.01 GT 1.9329 AG 1.9086 0.0035 1815 0
AMBRA1--BARD1 1 0 1.00 0.00 AMBRA1^ENSG00000110497.14 25816 chr11:46408513:- BARD1^ENSG00000138376.11 41938 chr2:214745854:- ONLY_REF_SPLICE YES 385 146 0.01 0.01 GT 1.9219 AG 1.9086 0.0034 2795 0
NPRL3--ZP2 26 2 26.00 1.86 NPRL3^ENSG00000103148.17 16779 chr16:88698:- ZP2^ENSG00000103310.11 25015 chr16:21211395:- ONLY_REF_SPLICE YES 478 4 0.06 5.80 GT 1.9329 AG 1.9656 0.0941 343 0
NPRL3--ZP2 2 2 2.00 0.14 NPRL3^ENSG00000103148.17 16779 chr16:88698:- ZP2^ENSG00000103310.11 24664 chr16:21211746:- ONLY_REF_SPLICE YES 478 0 0.01 5.00 GT 1.9329 AG 1.8892 0.0073 375 0
CASC15--GRIA4 19 2 19.00 1.81 CASC15^ENSG00000272168.8 30353 chr6:22020542:+ GRIA4^ENSG00000152578.13 108933 chr11:105862024:+ ONLY_REF_SPLICE YES 1 15 11.00 1.38 GT 1.7819 AG 1.9329 0.0702 1526 0
CASC15--GRIA4 1 2 1.00 0.10 CASC15^ENSG00000272168.8 34733 chr6:22043894:+ GRIA4^ENSG00000152578.13 108933 chr11:105862024:+ ONLY_REF_SPLICE YES 1 15 2.00 0.25 GT 1.7232 AG 1.9329 0.0037 3200 0
CASC15--GRIA4 1 2 1.00 0.10 CASC15^ENSG00000272168.8 30353 chr6:22020542:+ GRIA4^ENSG00000152578.13 107803 chr11:105842783:+ ONLY_REF_SPLICE NO 1 0 2.00 4.00 GT 1.7819 AG 1.8062 0.0037 2172 0
SNU13--LLPH 16 0 16.00 0.00 SNU13^ENSG00000100138.15 6709 chr22:41680244:- LLPH^ENSG00000139233.7 14346 chr12:66129113:- ONLY_REF_SPLICE YES 544 199 0.03 0.09 GT 1.7056 AG 1.8295 0.054 2440 0
CBLB--LEKR1 11 1 11.00 1.00 CBLB^ENSG00000114423.23 10084 chr3:105751462:- LEKR1^ENSG00000197980.13 46726 chr3:156920575:+ ONLY_REF_SPLICE YES 493 20 0.03 0.62 GT 1.9899 AG 1.8256 0.0405 114 0
CBLB--LEKR1 2 0 2.00 0.00 CBLB^ENSG00000114423.23 7648 chr3:105776396:- LEKR1^ENSG00000197980.13 46726 chr3:156920575:+ ONLY_REF_SPLICE YES 423 20 0.01 0.14 GT 1.8062 AG 1.8256 0.0068 1177 0
STK33--DENND2B 11 0 11.00 0.00 STK33^ENSG00000130413.15 17020 chr11:8461805:- DENND2B^ENSG00000166444.19 54556 chr11:8750725:- ONLY_REF_SPLICE YES 401 2533 0.03 0.00 GT 1.9219 AG 1.7819 0.0371 1809 0
AL135878.1--MOXD1 9 0 9.00 0.00 AL135878.1^ENSG00000258028.3 2150 chr14:28972339:+ MOXD1^ENSG00000079931.15 37315 chr6:132374777:- ONLY_REF_SPLICE YES 0 2216 10.00 0.00 GT 1.3710 AG 1.5628 0.0304 2703 0
MAT2A--C6orf62 8 2 8.00 2.00 MAT2A^ENSG00000168906.13 4785 chr2:85543034:+ C6orf62^ENSG00000112308.13 12492 chr6:24716324:- ONLY_REF_SPLICE YES 1682 422 0.01 0.03 GT 1.8323 AG 1.5546 0.0338 1323 0
RANBP2--SH3RF3 7 0 7.00 0.00 RANBP2^ENSG00000153201.16 22975 chr2:108768388:+ SH3RF3^ENSG00000172985.11 38079 chr2:109347674:+ ONLY_REF_SPLICE YES 487 38 0.02 0.21 GT 1.3710 AG 1.8323 0.0236 2570 0
52 rows