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659_cYf-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/fusioninspector/659_cYf-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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11.7 KB
Workflow Run
dev_rna_exp09_10-3b7a596a
Published
Jun 04, 2026 4:37 PM

Content

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
EWSR1--FLI1 591 0 591.00 0.00 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ FLI1^ENSG00000151702.17 37165 chr11:128805366:+ ONLY_REF_SPLICE YES 1452 49 0.41 11.84 GT 1.8062 AG 1.7819 2.0063 1466 0
EWSR1--FLI1 49 0 49.00 0.00 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ FLI1^ENSG00000151702.17 40039 chr11:128809157:+ ONLY_REF_SPLICE YES 1452 372 0.03 0.13 GT 1.8062 AG 1.9329 0.1663 1609 0
EWSR1--FLI1 16 0 16.00 0.00 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ FLI1^ENSG00000151702.17 38979 chr11:128807180:+ ONLY_REF_SPLICE YES 1452 211 0.01 0.08 GT 1.8062 AG 1.8062 0.0543 1231 0
EWSR1--FLI1 4 0 4.00 0.00 EWSR1^ENSG00000182944.18 9174 chr22:29278216:+ FLI1^ENSG00000151702.17 40039 chr11:128809157:+ ONLY_REF_SPLICE YES 1249 372 0.00 0.01 GT 1.8323 AG 1.9329 0.0136 1487 0
SLCO5A1--ANK2 378 0 378.00 0.00 SLCO5A1^ENSG00000137571.11 8106 chr8:69738040:- ANK2^ENSG00000145362.20 38285 chr4:113174416:+ ONLY_REF_SPLICE YES 110 228 3.41 1.66 GT 1.8892 AG 1.9656 1.2832 2834 0
SLCO5A1--ANK2 224 0 224.00 0.00 SLCO5A1^ENSG00000137571.11 9305 chr8:69705031:- ANK2^ENSG00000145362.20 38285 chr4:113174416:+ ONLY_REF_SPLICE YES 25 228 8.65 0.98 GT 1.9086 AG 1.9656 0.7604 3518 0
SLCO5A1--ANK2 84 0 84.00 0.00 SLCO5A1^ENSG00000137571.11 6941 chr8:69755424:- ANK2^ENSG00000145362.20 38285 chr4:113174416:+ ONLY_REF_SPLICE YES 657 228 0.13 0.37 GT 1.7056 AG 1.9656 0.2852 2563 0
SLCO5A1--ANK2 53 0 53.00 0.00 SLCO5A1^ENSG00000137571.11 5345 chr8:69761743:- ANK2^ENSG00000145362.20 38285 chr4:113174416:+ ONLY_REF_SPLICE YES 580 228 0.09 0.24 GT 1.8892 AG 1.9656 0.1799 2188 0
SLCO5A1--ANK2 37 0 37.00 0.00 SLCO5A1^ENSG00000137571.11 4212 chr8:69831767:- ANK2^ENSG00000145362.20 38285 chr4:113174416:+ ONLY_REF_SPLICE YES 156 228 0.24 0.17 GT 1.8323 AG 1.9656 0.1256 1377 0
SLCO5A1--ANK2 14 0 14.00 0.00 SLCO5A1^ENSG00000137571.11 9217 chr8:69705119:- ANK2^ENSG00000145362.20 38285 chr4:113174416:+ INCL_NON_REF_SPLICE YES 49 228 0.30 0.07 GT 1.9899 AG 1.9656 0.0475 3458 0
SLCO5A1--ANK2 8 0 8.00 0.00 SLCO5A1^ENSG00000137571.11 8106 chr8:69738040:- ANK2^ENSG00000145362.20 39387 chr4:113196368:+ ONLY_REF_SPLICE YES 110 254 0.08 0.04 GT 1.8892 AG 1.9656 0.0272 3281 0
SLCO5A1--ANK2 5 0 5.00 0.00 SLCO5A1^ENSG00000137571.11 8106 chr8:69738040:- ANK2^ENSG00000145362.20 36758 chr4:113151080:+ ONLY_REF_SPLICE YES 110 183 0.05 0.03 GT 1.8892 AG 1.8892 0.017 1593 0
SLCO5A1--ANK2 5 0 5.00 0.00 SLCO5A1^ENSG00000137571.11 7991 chr8:69738155:- ANK2^ENSG00000145362.20 38285 chr4:113174416:+ INCL_NON_REF_SPLICE YES 553 228 0.01 0.03 GT 1.6729 AG 1.9656 0.017 2787 0
SLCO5A1--ANK2 4 0 4.00 0.00 SLCO5A1^ENSG00000137571.11 6941 chr8:69755424:- ANK2^ENSG00000145362.20 36758 chr4:113151080:+ ONLY_REF_SPLICE YES 657 183 0.01 0.03 GT 1.7056 AG 1.8892 0.0136 1037 0
SLCO5A1--ANK2 4 0 4.00 0.00 SLCO5A1^ENSG00000137571.11 5345 chr8:69761743:- ANK2^ENSG00000145362.20 39387 chr4:113196368:+ ONLY_REF_SPLICE YES 580 254 0.01 0.02 GT 1.8892 AG 1.9656 0.0136 1844 0
SLCO5A1--ANK2 3 0 3.00 0.00 SLCO5A1^ENSG00000137571.11 5345 chr8:69761743:- ANK2^ENSG00000145362.20 41585 chr4:113232161:+ ONLY_REF_SPLICE YES 580 207 0.01 0.02 GT 1.8892 AG 1.8892 0.0102 1130 0
SLCO5A1--ANK2 1 0 1.00 0.00 SLCO5A1^ENSG00000137571.11 5345 chr8:69761743:- ANK2^ENSG00000145362.20 36758 chr4:113151080:+ ONLY_REF_SPLICE YES 580 183 0.00 0.01 GT 1.8892 AG 1.8892 0.0034 1825 0
SLCO5A1--ANK2 1 0 1.00 0.00 SLCO5A1^ENSG00000137571.11 4212 chr8:69831767:- ANK2^ENSG00000145362.20 36758 chr4:113151080:+ ONLY_REF_SPLICE YES 156 183 0.01 0.01 GT 1.8323 AG 1.8892 0.0034 2250 0
PCDHA4--PCDHAC1 265 0 132.50 0.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC1^ENSG00000248383.5 19813 chr5:140978949:+ ONLY_REF_SPLICE YES 55 27 4.75 9.50 GT 1.9656 AG 1.3996 0.4498 1304 0
PCDHA4--PCDHAC2 265 0 132.50 0.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC2^ENSG00000243232.6 18677 chr5:140978949:+ ONLY_REF_SPLICE YES 55 98 4.75 2.69 GT 1.9656 AG 1.3996 0.4498 1213 0
RPS6KA5--TTC7B 207 2 207.00 2.00 RPS6KA5^ENSG00000100784.12 21346 chr14:90875201:- TTC7B^ENSG00000165914.15 52278 chr14:90786328:- ONLY_REF_SPLICE YES 132 745 1.58 0.28 GT 1.8892 AG 1.9086 0.7095 2903 0
APBB2--GNAS 147 1 147.00 0.55 APBB2^ENSG00000163697.17 14463 chr4:41013583:- GNAS^ENSG00000087460.28 56155 chr20:58895612:+ ONLY_REF_SPLICE YES 128 9686 1.16 0.02 GT 1.8256 AG 1.8892 0.5009 1664 0
APBB2--GNAS 87 1 87.00 0.33 APBB2^ENSG00000163697.17 21411 chr4:40890364:- GNAS^ENSG00000087460.28 56155 chr20:58895612:+ ONLY_REF_SPLICE YES 83 9686 1.06 0.01 GT 1.7819 AG 1.8892 0.2965 2642 0
APBB2--GNAS 30 1 30.00 0.11 APBB2^ENSG00000163697.17 17843 chr4:40934456:- GNAS^ENSG00000087460.28 56155 chr20:58895612:+ ONLY_REF_SPLICE YES 104 9686 0.30 0.00 GT 1.5656 AG 1.8892 0.1022 443 0
APBB2--GNAS 12 0 12.00 0.00 APBB2^ENSG00000163697.17 11578 chr4:41065576:- GNAS^ENSG00000087460.28 56155 chr20:58895612:+ ONLY_REF_SPLICE YES 62 9686 0.21 0.00 GT 1.9656 AG 1.8892 0.0407 2518 0
APBB2--GNAS 6 0 6.00 0.00 APBB2^ENSG00000163697.17 12647 chr4:41033236:- GNAS^ENSG00000087460.28 56155 chr20:58895612:+ ONLY_REF_SPLICE YES 128 9686 0.05 0.00 GT 1.9656 AG 1.8892 0.0204 2154 0
APBB2--GNAS 2 1 2.00 0.01 APBB2^ENSG00000163697.17 18990 chr4:40893265:- GNAS^ENSG00000087460.28 56155 chr20:58895612:+ ONLY_REF_SPLICE YES 142 9686 0.03 0.00 GT 1.3710 AG 1.8892 0.0068 1590 0
APBB2--GNAS 2 0 2.00 0.00 APBB2^ENSG00000163697.17 14463 chr4:41013583:- GNAS^ENSG00000087460.28 61749 chr20:58903531:+ ONLY_REF_SPLICE YES 128 15282 0.02 0.00 GT 1.8256 AG 1.7465 0.0068 456 0
FLI1--EWSR1 128 1 128.00 1.00 FLI1^ENSG00000151702.17 10577 chr11:128782023:+ EWSR1^ENSG00000182944.18 34353 chr22:29288606:+ ONLY_REF_SPLICE YES 41 1250 3.10 0.10 GT 1.7819 AG 1.9899 0.4379 62 1
TAS2R14--PRR4 111 1 111.00 0.99 TAS2R14^ENSG00000212127.6 4492 chr12:10973655:- PRR4^ENSG00000111215.12 11417 chr12:10848407:- ONLY_REF_SPLICE YES 10 24 10.27 4.52 GT 1.9329 AG 1.8062 0.3802 1599 0
TAS2R14--PRR4 11 0 11.00 0.00 TAS2R14^ENSG00000212127.6 2321 chr12:11047020:- PRR4^ENSG00000111215.12 11417 chr12:10848407:- ONLY_REF_SPLICE YES 22 24 0.52 0.48 GT 1.9086 AG 1.8062 0.0373 1602 0
TAS2R14--PRR4 11 0 11.00 0.00 TAS2R14^ENSG00000212127.6 3425 chr12:11034782:- PRR4^ENSG00000111215.12 11417 chr12:10848407:- ONLY_REF_SPLICE YES 15 24 0.75 0.48 GT 1.6402 AG 1.8062 0.0373 1181 0
TAS2R14--PRR4 5 0 5.00 0.00 TAS2R14^ENSG00000212127.6 1152 chr12:11171422:- PRR4^ENSG00000111215.12 11417 chr12:10848407:- ONLY_REF_SPLICE YES 3320 24 0.00 0.24 GT 1.8256 AG 1.8062 0.017 2542 0
TAS2R14--PRR4 1 1 1.00 0.01 TAS2R14^ENSG00000212127.6 4492 chr12:10973655:- PRR4^ENSG00000111215.12 12457 chr12:10847367:- ONLY_REF_SPLICE YES 10 139 0.27 0.02 GT 1.9329 AG 1.8892 0.0034 1088 0
TLK2--AC240565.1 109 0 109.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 138 69 0.79 1.57 GT 1.8892 AG 1.8892 0.37 1734 0
ZC3H4--AC073508.1 106 0 106.00 0.00 ZC3H4^ENSG00000130749.10 14809 chr19:47069092:- AC073508.1^ENSG00000224244.1 22554 chr17:40689299:- INCL_NON_REF_SPLICE YES 1202 0 0.09 107.00 GC 1.2729 AG 1.9899 0.3599 1586 0
ZC3H4--AC073508.1 15 0 15.00 0.00 ZC3H4^ENSG00000130749.10 14809 chr19:47069092:- AC073508.1^ENSG00000224244.1 24151 chr17:40687702:- INCL_NON_REF_SPLICE YES 1202 0 0.01 16.00 GC 1.2729 AG 1.8062 0.0509 1508 0
ZC3H4--AC073508.1 2 0 2.00 0.00 ZC3H4^ENSG00000130749.10 14809 chr19:47069092:- AC073508.1^ENSG00000224244.1 23126 chr17:40688727:- ONLY_REF_SPLICE YES 1202 0 0.00 3.00 GC 1.2729 AG 1.8892 0.0068 1682 0
FAM168A--PGA5 103 0 103.00 0.00 FAM168A^ENSG00000054965.11 1267 chr11:73597923:- PGA5^ENSG00000256713.8 23341 chr11:61244165:+ ONLY_REF_SPLICE YES 421 20 0.25 4.95 GT 1.8892 AG 1.9656 0.3497 2424 0
TVP23C--CDRT4 78 0 78.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 76 72 1.03 1.08 GT 1.9329 AG 1.6402 0.2648 137 0
TVP23C--CDRT4 34 0 34.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 76 0 0.45 35.00 GT 1.9329 AG 1.9899 0.1154 1215 0
TVP23C--CDRT4 10 0 10.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 30 72 0.35 0.15 GT 1.8323 AG 1.6402 0.0339 1363 0
TVP23C--CDRT4 6 0 6.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 30 0 0.23 7.00 GT 1.8323 AG 1.9899 0.0204 2126 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- INCL_NON_REF_SPLICE YES 76 0 0.06 5.00 GT 1.9329 AG 1.8892 0.0136 1153 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 10 0 0.18 2.00 GT 1.8892 AG 1.9899 0.0034 1949 0
AC139256.1--PDPR 48 0 48.00 0.00 AC139256.1^ENSG00000260735.2 2622 chr16:15103355:+ PDPR^ENSG00000090857.14 10788 chr16:70120461:+ ONLY_REF_SPLICE YES 37 182 1.29 0.27 GT 1.8892 AG 1.8892 0.163 2616 0
AC139256.1--PDPR 6 0 6.00 0.00 AC139256.1^ENSG00000260735.2 3816 chr16:15107155:+ PDPR^ENSG00000090857.14 10788 chr16:70120461:+ INCL_NON_REF_SPLICE YES 0 182 7.00 0.04 GT 1.8295 AG 1.8892 0.0204 1800 0
AC138409.2--NAIP 39 0 39.00 0.00 AC138409.2^ENSG00000215158.9 11022 chr5:34175822:- NAIP^ENSG00000249437.8 25774 chr5:71003857:- ONLY_REF_SPLICE YES 39 58 1.00 0.68 GT 1.9329 AG 1.8295 0.1324 1426 0
AC138409.2--NAIP 30 0 30.00 0.00 AC138409.2^ENSG00000215158.9 11399 chr5:34175445:- NAIP^ENSG00000249437.8 25774 chr5:71003857:- ONLY_REF_SPLICE YES 2 58 10.33 0.53 GT 1.9086 AG 1.8295 0.1018 1066 0
C1QTNF3--AMACR 32 0 32.00 0.00 C1QTNF3^ENSG00000082196.21 7818 chr5:34020587:- AMACR^ENSG00000242110.8 14880 chr5:34005899:- INCL_NON_REF_SPLICE YES 22 59 1.43 0.55 GT 1.9086 AG 1.9086 0.1086 1362 0
GNAS--APBB2 30 0 30.00 0.00 GNAS^ENSG00000087460.28 23882 chr20:58905480:+ APBB2^ENSG00000163697.17 41575 chr4:41065673:- ONLY_REF_SPLICE YES 6035 22 0.01 1.35 GT 1.9899 AG 1.8062 0.1018 2198 0
GNAS--APBB2 23 0 23.00 0.00 GNAS^ENSG00000087460.28 23882 chr20:58905480:+ APBB2^ENSG00000163697.17 43742 chr4:41014398:- ONLY_REF_SPLICE YES 6035 143 0.00 0.17 GT 1.9899 AG 1.9086 0.0781 1403 0
GNAS--APBB2 2 0 2.00 0.00 GNAS^ENSG00000087460.28 23882 chr20:58905480:+ APBB2^ENSG00000163697.17 42673 chr4:41033304:- ONLY_REF_SPLICE YES 6035 62 0.00 0.05 GT 1.9899 AG 1.4295 0.0068 1964 0
AC096555.1--PCSK2 21 0 21.00 0.00 AC096555.1^ENSG00000286152.1 2446 chr2:184057832:- PCSK2^ENSG00000125851.10 15954 chr20:17409263:+ ONLY_REF_SPLICE YES 0 643 22.00 0.03 GT 1.9656 AG 1.8892 0.0713 4422 0
CCDC169--SOHLH2 16 0 16.00 0.00 CCDC169^ENSG00000242715.8 10007 chr13:36248606:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 4 0 3.40 17.00 GT 1.8295 AG 1.7232 0.0543 1362 0
CCDC169--SOHLH2 3 0 3.00 0.00 CCDC169^ENSG00000242715.8 8930 chr13:36253803:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 5 0 0.67 4.00 GT 1.9899 AG 1.7232 0.0102 1265 0
CCDC169--SOHLH2 1 0 1.00 0.00 CCDC169^ENSG00000242715.8 1204 chr13:36297637:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 45 0 0.04 2.00 GT 1.7465 AG 1.7232 0.0034 1066 0
UBE2G1--TMCC1-AS1 12 0 12.00 0.00 UBE2G1^ENSG00000132388.12 1358 chr17:4366271:- TMCC1-AS1^ENSG00000271270.7 26066 chr3:129918400:+ ONLY_REF_SPLICE YES 530 2 0.02 4.33 GT 1.7819 AG 1.5219 0.0407 4237 0
INSC--CALCB 3 0 3.00 0.00 INSC^ENSG00000188487.12 6794 chr11:15178366:+ CALCB^ENSG00000175868.14 32688 chr11:15075158:+ INCL_NON_REF_SPLICE YES 493 737 0.01 0.01 GC 1.8892 AG 1.8892 0.0102 2285 0
60 rows