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659_bTq-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/fusioninspector/659_bTq-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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10.1 KB
Workflow Run
dev_rna_exp09_10-3b7a596a
Published
Jun 04, 2026 4:38 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PTPRK--RSPO3 604 15 604.00 14.87 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 55391 chr6:127148648:+ ONLY_REF_SPLICE YES 1123 149 0.55 4.13 GT 1.8892 AG 1.9329 2.0935 1100 0
PTPRK--RSPO3 5 15 5.00 0.12 PTPRK^ENSG00000152894.15 3698 chr6:128491732:- RSPO3^ENSG00000146374.14 55391 chr6:127148648:+ ONLY_REF_SPLICE YES 1060 149 0.02 0.14 GT 1.7056 AG 1.9329 0.0173 1692 0
PTPRK--RSPO3 3 0 3.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 58928 chr6:127195823:+ ONLY_REF_SPLICE YES 1123 656 0.00 0.01 GT 1.8892 AG 0.9710 0.0101 1145 0
PTPRK--RSPO3 2 1 2.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 56583 chr6:127150426:+ ONLY_REF_SPLICE YES 1123 978 0.00 0.00 GT 1.8892 AG 1.9219 0.0068 125 0
PTPRK--RSPO3 2 0 2.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 57730 chr6:127155241:+ ONLY_REF_SPLICE YES 1123 1711 0.00 0.00 GT 1.8892 AG 1.9656 0.0068 1143 0
PCDHGB2--PCDHGA10 554 2 69.25 0.25 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 84 557.00 6.55 GT 1.7819 AG 1.3383 0.2351 1890 0
PCDHGB2--PCDHGA11 554 2 69.25 0.25 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 30 557.00 17.97 GT 1.7819 AG 1.3383 0.2351 1018 0
PCDHGB2--PCDHGA12 554 2 69.25 0.25 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 46 557.00 11.85 GT 1.7819 AG 1.3383 0.2351 1413 0
PCDHGB2--PCDHGA8 554 2 69.25 0.25 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 16 557.00 32.76 GT 1.7819 AG 1.3383 0.2351 1419 0
PCDHGB2--PCDHGA9 554 2 69.25 0.25 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 43 557.00 12.66 GT 1.7819 AG 1.3383 0.2351 1493 0
PCDHGB2--PCDHGC3 554 2 69.25 0.25 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 248 557.00 2.24 GT 1.7819 AG 1.3383 0.2351 1210 0
PCDHGB2--PCDHGC4 554 2 69.25 0.25 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 4 557.00 111.40 GT 1.7819 AG 1.3383 0.2351 1585 0
PCDHGB2--PCDHGC5 554 2 69.25 0.25 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 25 557.00 21.42 GT 1.7819 AG 1.3383 0.2351 1206 0
BIRC6--LINC01320 532 22 532.00 21.72 BIRC6^ENSG00000115760.14 72350 chr2:32575366:+ LINC01320^ENSG00000228262.10 95773 chr2:33926840:+ ONLY_REF_SPLICE YES 886 0 0.63 555.00 GT 1.9329 AG 1.7465 1.8732 2376 0
BIRC6--LINC01320 5 23 5.00 1.25 BIRC6^ENSG00000115760.14 73523 chr2:32590978:+ LINC01320^ENSG00000228262.10 95773 chr2:33926840:+ ONLY_REF_SPLICE YES 790 0 0.04 29.00 GT 1.7819 AG 1.7465 0.0211 1783 0
BIRC6--LINC01320 6 3 6.00 0.03 BIRC6^ENSG00000115760.14 71139 chr2:32549481:+ LINC01320^ENSG00000228262.10 95773 chr2:33926840:+ ONLY_REF_SPLICE YES 1155 0 0.01 10.00 GT 1.8892 AG 1.7465 0.0204 1165 0
BIRC6--LINC01320 3 0 3.00 0.00 BIRC6^ENSG00000115760.14 72350 chr2:32575366:+ LINC01320^ENSG00000228262.10 96902 chr2:33944428:+ ONLY_REF_SPLICE YES 886 1 0.00 2.00 GT 1.9329 AG 1.8295 0.0101 2629 0
AL669831.4--SEPTIN14 158 5 158.00 5.00 AL669831.4^ENSG00000230092.7 4587 chr1:805799:- SEPTIN14^ENSG00000154997.9 19871 chr7:55796092:- ONLY_REF_SPLICE YES 62 32 2.60 4.97 GT 1.7819 AG 1.9899 0.5514 1425 0
PMS2P6--CCDC146 154 5 154.00 4.16 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 10176 chr7:77167658:+ ONLY_REF_SPLICE YES 95 63 1.67 2.50 GT 1.4566 AG 1.7465 0.5351 6786 0
PMS2P6--CCDC146 31 5 31.00 0.84 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 10176 chr7:77167658:+ ONLY_REF_SPLICE YES 33 63 1.09 0.58 GT 1.8323 AG 1.7465 0.1077 7283 0
PMS2P6--CCDC146 9 0 9.00 0.00 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 11343 chr7:77236947:+ ONLY_REF_SPLICE YES 95 141 0.10 0.07 GT 1.4566 AG 1.9329 0.0304 5731 0
PMS2P6--CCDC146 6 0 6.00 0.00 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 11343 chr7:77236947:+ ONLY_REF_SPLICE YES 33 141 0.21 0.05 GT 1.8323 AG 1.9329 0.0203 6311 0
PMS2P6--CCDC146 1 0 1.00 0.00 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 14166 chr7:77254506:+ ONLY_REF_SPLICE YES 33 156 0.06 0.01 GT 1.8323 AG 1.5546 0.0034 4376 0
TVP23C--CDRT4 103 3 103.00 2.52 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 79 11 1.34 8.92 GT 1.9329 AG 1.9899 0.3569 1215 0
TVP23C--CDRT4 47 1 47.00 0.28 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 416 11 0.12 4.08 GT 1.8323 AG 1.9899 0.1599 2126 0
TVP23C--CDRT4 28 0 28.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 79 41 0.36 0.69 GT 1.9329 AG 1.6402 0.0947 137 0
TVP23C--CDRT4 15 0 15.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 212 11 0.08 1.33 GT 1.9086 AG 1.9899 0.0507 1774 0
TVP23C--CDRT4 13 2 13.00 0.19 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 11 11 1.33 1.33 GT 1.8892 AG 1.9899 0.0446 1949 0
TVP23C--CDRT4 10 0 10.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 416 41 0.03 0.26 GT 1.8323 AG 1.6402 0.0338 1363 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 212 41 0.01 0.07 GT 1.9086 AG 1.6402 0.0068 697 0
WASH3P--FOCAD 73 1 73.00 1.00 WASH3P^ENSG00000185596.16 2310 chr15:101966223:+ FOCAD^ENSG00000188352.12 37432 chr9:20874681:+ ONLY_REF_SPLICE YES 801 757 0.09 0.10 GT 1.9656 AG 1.7232 0.2503 823 0
WASH3P--FOCAD 33 0 33.00 0.00 WASH3P^ENSG00000185596.16 1039 chr15:101961641:+ FOCAD^ENSG00000188352.12 37432 chr9:20874681:+ ONLY_REF_SPLICE YES 174 757 0.19 0.04 GT 1.6402 AG 1.7232 0.1116 1348 0
AC138409.2--NAIP 50 0 50.00 0.00 AC138409.2^ENSG00000215158.9 11022 chr5:34175822:- NAIP^ENSG00000249437.8 25774 chr5:71003857:- ONLY_REF_SPLICE YES 38 391 1.31 0.13 GT 1.9329 AG 1.8295 0.1691 1426 0
AC138409.2--NAIP 6 0 6.00 0.00 AC138409.2^ENSG00000215158.9 11399 chr5:34175445:- NAIP^ENSG00000249437.8 25774 chr5:71003857:- ONLY_REF_SPLICE YES 11 391 0.58 0.02 GT 1.9086 AG 1.8295 0.0203 1066 0
BCL7C--NBEA 48 0 48.00 0.00 BCL7C^ENSG00000099385.12 3803 chr16:30888860:- NBEA^ENSG00000172915.19 52883 chr13:35349108:+ ONLY_REF_SPLICE YES 614 218 0.08 0.22 GT 1.9219 AG 1.9656 0.1624 2774 0
LINC02609--GABBR2 38 0 38.00 0.00 LINC02609^ENSG00000233593.10 1176 chr1:90851483:- GABBR2^ENSG00000136928.7 55095 chr9:98293902:- ONLY_REF_SPLICE YES 0 7 39.00 4.88 GT 1.8892 AG 1.7056 0.1285 1938 0
LINC02609--GABBR2 12 0 12.00 0.00 LINC02609^ENSG00000233593.10 2392 chr1:90837550:- GABBR2^ENSG00000136928.7 55095 chr9:98293902:- ONLY_REF_SPLICE YES 0 7 13.00 1.62 GT 1.3383 AG 1.7056 0.0406 1537 0
LINC02609--GABBR2 6 0 6.00 0.00 LINC02609^ENSG00000233593.10 1118 chr1:90851541:- GABBR2^ENSG00000136928.7 55095 chr9:98293902:- ONLY_REF_SPLICE YES 0 7 7.00 0.88 GT 1.5628 AG 1.7056 0.0203 1974 0
AC015911.9--SLFN12L 28 4 28.00 4.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 6142 chr17:35480195:- ONLY_REF_SPLICE YES 0 51 33.00 0.63 GT 1.9329 AG 1.8892 0.1082 533 0
AC015911.9--SLFN12L 9 0 9.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000286065.2 8152 chr17:35478185:- ONLY_REF_SPLICE YES 0 71 10.00 0.14 GT 1.9329 AG 1.9329 0.0304 1380 0
AC015911.9--SLFN12L 1 0 1.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 9263 chr17:35475485:- ONLY_REF_SPLICE YES 0 115 2.00 0.02 GT 1.9329 AG 1.7968 0.0034 508 0
NR6A1--PSMB7 23 0 23.00 0.00 NR6A1^ENSG00000148200.17 2334 chr9:124733308:- PSMB7^ENSG00000136930.13 21635 chr9:124414935:- ONLY_REF_SPLICE YES 65 774 0.36 0.03 GT 1.9656 AG 1.9656 0.0778 2419 0
NR6A1--PSMB7 2 0 2.00 0.00 NR6A1^ENSG00000148200.17 1292 chr9:124771020:- PSMB7^ENSG00000136930.13 21635 chr9:124414935:- ONLY_REF_SPLICE YES 91 774 0.03 0.00 GT 1.3996 AG 1.9656 0.0068 3397 0
CRYZL2P--SEC16B 19 1 19.00 0.86 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 0 26 21.00 0.78 GT 1.9086 AG 1.5546 0.0672 2589 0
CRYZL2P--SEC16B 3 1 3.00 0.14 CRYZL2P^ENSG00000242193.11 11220 chr1:178022440:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 2 26 1.67 0.19 GT 1.9656 AG 1.5546 0.0106 2635 0
MIR4713HG--GLDN 12 6 12.00 4.00 MIR4713HG^ENSG00000259240.1 2262 chr15:51278050:+ GLDN^ENSG00000186417.14 9468 chr15:51377449:+ ONLY_REF_SPLICE YES 2 20 6.33 0.90 GT 1.9329 AG 1.8892 0.0541 1224 0
MIR4713HG--GLDN 8 5 8.00 1.85 MIR4713HG^ENSG00000259240.1 1194 chr15:51037681:+ GLDN^ENSG00000186417.14 9468 chr15:51377449:+ ONLY_REF_SPLICE YES 3 20 3.50 0.67 GT 1.9656 AG 1.8892 0.0334 158 0
MIR4713HG--GLDN 2 2 2.00 0.15 MIR4713HG^ENSG00000259240.1 1194 chr15:51037681:+ GLDN^ENSG00000186417.14 10869 chr15:51383785:+ ONLY_REF_SPLICE YES 3 26 1.25 0.19 GT 1.9656 AG 1.7056 0.0073 477 0
KLRC4--KLRK1 12 2 12.00 1.93 KLRC4^ENSG00000183542.5 3122 chr12:10407636:- KLRK1^ENSG00000213809.9 8583 chr12:10388875:- INCL_NON_REF_SPLICE YES 13 46 1.07 0.32 GT 1.3996 AG 1.9219 0.0471 1207 0
KLRC4--KLRK1 1 1 1.00 0.07 KLRC4^ENSG00000183542.5 2429 chr12:10408329:- KLRK1^ENSG00000213809.9 8583 chr12:10388875:- ONLY_REF_SPLICE YES 40 46 0.07 0.06 GT 1.5329 AG 1.9219 0.0036 1389 0
51 rows