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659_Fr-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/fusioninspector/659_Fr-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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Workflow Run
dev_rna_exp09_10-3b7a596a
Published
Jun 04, 2026 4:39 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PCDHGA5--PCDHGC5 488 1 488.00 0.99 PCDHGA5^ENSG00000253485.2 3520 chr5:141366751:+ PCDHGC5^ENSG00000240764.4 11402 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 20 490.00 23.33 GT 1.8892 AG 1.3383 1.6501 1591 0
ZCCHC7--BX255923.2 475 9 475.00 8.88 ZCCHC7^ENSG00000147905.18 3730 chr9:37126942:+ BX255923.2^ENSG00000276462.2 24808 chr9:41107741:- ONLY_REF_SPLICE YES 524 0 0.92 485.00 GT 1.9656 AG 1.9086 1.6329 1381 0
ZCCHC7--BX255923.2 56 1 56.00 0.10 ZCCHC7^ENSG00000147905.18 3730 chr9:37126942:+ BX255923.2^ENSG00000276462.2 26109 chr9:41106388:- ONLY_REF_SPLICE YES 524 1 0.11 29.00 GT 1.9656 AG 1.8323 0.1893 1406 0
ZCCHC7--BX255923.2 1 9 1.00 0.02 ZCCHC7^ENSG00000147905.18 5880 chr9:37147445:+ BX255923.2^ENSG00000276462.2 24808 chr9:41107741:- ONLY_REF_SPLICE YES 289 0 0.04 11.00 GT 1.8256 AG 1.9086 0.0035 1131 0
PCDHGB2--PCDHGA10 471 0 422.11 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 10 472.00 42.91 GT 1.7819 AG 1.3383 1.4244 1890 0
PCDHGB2--PCDHGA11 470 0 6.98 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 13 471.00 33.64 GT 1.7819 AG 1.3383 0.0236 1018 0
PCDHGB2--PCDHGA12 470 0 6.98 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 38 471.00 12.08 GT 1.7819 AG 1.3383 0.0236 1413 0
PCDHGB2--PCDHGA8 470 0 6.98 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 15 471.00 29.44 GT 1.7819 AG 1.3383 0.0236 1419 0
PCDHGB2--PCDHGA9 470 0 6.98 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 33 471.00 13.85 GT 1.7819 AG 1.3383 0.0236 1493 0
PCDHGB2--PCDHGC3 470 0 6.98 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 442 471.00 1.06 GT 1.7819 AG 1.3383 0.0236 1210 0
PCDHGB2--PCDHGC4 470 0 6.98 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 471.00 157.00 GT 1.7819 AG 1.3383 0.0236 1585 0
PCDHGB2--PCDHGC5 470 0 6.98 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 20 471.00 22.43 GT 1.7819 AG 1.3383 0.0236 1206 0
DENND11--ULK4 458 2 458.00 1.93 DENND11^ENSG00000257093.7 8200 chr7:141664172:- ULK4^ENSG00000168038.11 33535 chr3:41900829:- ONLY_REF_SPLICE YES 275 235 1.67 1.95 GT 1.8256 AG 1.9219 1.5521 1173 0
DENND11--ULK4 16 2 16.00 0.07 DENND11^ENSG00000257093.7 9570 chr7:141662482:- ULK4^ENSG00000168038.11 33535 chr3:41900829:- INCL_NON_REF_SPLICE YES 16 235 1.12 0.08 GT 1.9656 AG 1.9219 0.0542 209 0
ACP3--ETV1 203 4 203.00 3.87 ACP3^ENSG00000014257.16 1208 chr3:132317576:+ ETV1^ENSG00000006468.14 20804 chr7:13989139:- ONLY_REF_SPLICE YES 367 204 0.57 1.01 GT 1.7465 AG 1.9329 0.6981 663 0
ACP3--ETV1 7 4 7.00 0.13 ACP3^ENSG00000014257.16 1208 chr3:132317576:+ ETV1^ENSG00000006468.14 20479 chr7:13989464:- ONLY_REF_SPLICE YES 367 60 0.03 0.20 GT 1.7465 AG 1.9899 0.024 343 0
ACP3--ETV1 4 0 4.00 0.00 ACP3^ENSG00000014257.16 1208 chr3:132317576:+ ETV1^ENSG00000006468.14 25529 chr7:13977480:- ONLY_REF_SPLICE YES 367 1504 0.01 0.00 GT 1.7465 AG 1.9656 0.0135 1065 0
DCAF1--SEC61A1 136 1 136.00 1.00 DCAF1^ENSG00000145041.15 6653 chr3:51443766:- SEC61A1^ENSG00000058262.10 35641 chr3:128060508:+ ONLY_REF_SPLICE YES 179 673 0.77 0.20 GT 1.9219 AG 1.5301 0.4623 1281 0
DCAF1--SEC61A1 2 0 2.00 0.00 DCAF1^ENSG00000145041.15 5515 chr3:51463114:- SEC61A1^ENSG00000058262.10 35641 chr3:128060508:+ ONLY_REF_SPLICE YES 191 673 0.02 0.00 GT 1.8892 AG 1.5301 0.0067 370 0
PCDHA4--PCDHAC1 135 4 67.50 2.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC1^ENSG00000248383.5 19813 chr5:140978949:+ ONLY_REF_SPLICE YES 46 23 2.98 5.83 GT 1.9656 AG 1.3996 0.2345 1304 0
PCDHA4--PCDHAC2 135 4 67.50 2.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC2^ENSG00000243232.6 18677 chr5:140978949:+ ONLY_REF_SPLICE YES 46 84 2.98 1.65 GT 1.9656 AG 1.3996 0.2345 1213 0
AL611929.1--AFDN 124 0 124.00 0.00 AL611929.1^ENSG00000234768.1 1331 chr6:168194688:+ AFDN^ENSG00000130396.20 32346 chr6:167943129:+ ONLY_REF_SPLICE YES 0 960 125.00 0.13 GT 1.8256 AG 1.8892 0.4184 4972 0
AL611929.1--AFDN 3 0 3.00 0.00 AL611929.1^ENSG00000234768.1 1324 chr6:168194681:+ AFDN^ENSG00000130396.20 37343 chr6:167951480:+ INCL_NON_REF_SPLICE YES 0 2373 4.00 0.00 CA 1.9086 CC 1.6049 0.0101 713 0
TTC28--CHEK2 117 0 117.00 0.00 TTC28^ENSG00000100154.14 1244 chr22:28679622:- CHEK2^ENSG00000183765.23 49259 chr22:28725367:- ONLY_REF_SPLICE YES 209 74 0.56 1.57 GT 1.2867 AG 1.8062 0.3948 4964 0
TTC28--CHEK2 3 0 3.00 0.00 TTC28^ENSG00000100154.14 1244 chr22:28679622:- CHEK2^ENSG00000183765.23 53745 chr22:28712017:- ONLY_REF_SPLICE YES 209 161 0.02 0.02 GT 1.2867 AG 1.7968 0.0101 1711 0
TLK2--AC240565.1 95 1 95.00 1.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 500 50 0.19 1.90 GT 1.8892 AG 1.8892 0.324 1734 0
AC092807.3--DDAH1 91 1 91.00 0.75 AC092807.3^ENSG00000282057.1 5553 chr1:85496166:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 219 93.00 0.42 GT 1.5628 AG 1.8062 0.3096 3011 0
AC092807.3--DDAH1 22 1 22.00 0.18 AC092807.3^ENSG00000282057.1 1267 chr1:85577984:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 219 24.00 0.11 GT 1.8062 AG 1.8062 0.0748 2484 0
AC092807.3--DDAH1 6 1 6.00 0.05 AC092807.3^ENSG00000282057.1 3294 chr1:85575832:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 219 8.00 0.04 GT 1.6895 AG 1.8062 0.0204 3244 0
AC092807.3--DDAH1 3 1 3.00 0.02 AC092807.3^ENSG00000282057.1 9402 chr1:85488291:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 219 5.00 0.02 GT 1.8892 AG 1.8062 0.0102 2892 0
TVP23C--CDRT4 85 0 85.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 117 7 0.73 10.75 GT 1.9329 AG 1.9899 0.2868 1215 0
TVP23C--CDRT4 42 0 42.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 319 7 0.13 5.38 GT 1.8323 AG 1.9899 0.1417 2126 0
TVP23C--CDRT4 13 0 13.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 117 45 0.12 0.30 GT 1.9329 AG 1.6402 0.0439 137 0
TVP23C--CDRT4 3 0 3.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 319 45 0.01 0.09 GT 1.8323 AG 1.6402 0.0101 1363 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 12 7 0.23 0.38 GT 1.8892 AG 1.9899 0.0067 1949 0
ATF6--SORL1 77 0 77.00 0.00 ATF6^ENSG00000118217.7 1145 chr1:161766442:+ SORL1^ENSG00000137642.13 40126 chr11:121470007:+ ONLY_REF_SPLICE YES 334 694 0.23 0.11 GT 1.5301 AG 1.8062 0.2598 3914 0
ATF6--SORL1 3 0 3.00 0.00 ATF6^ENSG00000118217.7 1145 chr1:161766442:+ SORL1^ENSG00000137642.13 41243 chr11:121478118:+ ONLY_REF_SPLICE YES 334 570 0.01 0.01 GT 1.5301 AG 1.8892 0.0101 2969 0
ATF6--SORL1 1 0 1.00 0.00 ATF6^ENSG00000118217.7 1145 chr1:161766442:+ SORL1^ENSG00000137642.13 45780 chr11:121513003:+ ONLY_REF_SPLICE YES 334 842 0.01 0.00 GT 1.5301 AG 1.9329 0.0034 2832 0
ERO1A--TXNDC16 41 0 41.00 0.00 ERO1A^ENSG00000197930.13 7674 chr14:52666375:- TXNDC16^ENSG00000087301.9 33024 chr14:52491005:- ONLY_REF_SPLICE YES 304 65 0.14 0.64 GT 1.6895 AG 1.9329 0.1384 1182 0
ERO1A--TXNDC16 5 0 5.00 0.00 ERO1A^ENSG00000197930.13 7674 chr14:52666375:- TXNDC16^ENSG00000087301.9 33101 chr14:52490928:- INCL_NON_REF_SPLICE YES 304 64 0.02 0.09 GT 1.6895 AG 1.9086 0.0169 1179 0
ERO1A--TXNDC16 4 0 4.00 0.00 ERO1A^ENSG00000197930.13 6497 chr14:52671630:- TXNDC16^ENSG00000087301.9 33024 chr14:52491005:- ONLY_REF_SPLICE YES 365 65 0.01 0.08 GT 1.9086 AG 1.9329 0.0135 91 1
ERO1A--TXNDC16 1 0 1.00 0.00 ERO1A^ENSG00000197930.13 6497 chr14:52671630:- TXNDC16^ENSG00000087301.9 37499 chr14:52470680:- ONLY_REF_SPLICE YES 365 110 0.01 0.02 GT 1.9086 AG 1.9329 0.0034 1688 0
ERO1A--TXNDC16 1 0 1.00 0.00 ERO1A^ENSG00000197930.13 6497 chr14:52671630:- TXNDC16^ENSG00000087301.9 44878 chr14:52432587:- ONLY_REF_SPLICE YES 365 163 0.01 0.01 GT 1.9086 AG 1.7819 0.0034 1286 0
MAP2K4--JMJD6 38 0 38.00 0.00 MAP2K4^ENSG00000065559.15 6761 chr17:12081530:+ JMJD6^ENSG00000070495.15 26330 chr17:76721933:- ONLY_REF_SPLICE YES 148 219 0.26 0.18 GT 1.7465 AG 1.7232 0.1282 1415 0
MAP2K4--JMJD6 6 0 6.00 0.00 MAP2K4^ENSG00000065559.15 1173 chr17:12021001:+ JMJD6^ENSG00000070495.15 26330 chr17:76721933:- ONLY_REF_SPLICE YES 356 219 0.02 0.03 GT 1.9329 AG 1.7232 0.0202 593 0
MAP2K4--JMJD6 6 0 6.00 0.00 MAP2K4^ENSG00000065559.15 4393 chr17:12054991:+ JMJD6^ENSG00000070495.15 26330 chr17:76721933:- ONLY_REF_SPLICE YES 212 219 0.03 0.03 GT 1.4295 AG 1.7232 0.0202 2610 0
GALNT17--AUTS2 33 1 33.00 1.00 GALNT17^ENSG00000185274.12 1897 chr7:71133040:+ AUTS2^ENSG00000158321.18 64548 chr7:70777103:+ ONLY_REF_SPLICE YES 704 888 0.05 0.04 GT 1.9329 AG 1.7056 0.1148 413 0
GALNT17--AUTS2 2 0 2.00 0.00 GALNT17^ENSG00000185274.12 1897 chr7:71133040:+ AUTS2^ENSG00000158321.18 72625 chr7:70789748:+ ONLY_REF_SPLICE YES 704 558 0.00 0.01 GT 1.9329 AG 1.7056 0.0067 599 0
JMJD6--ERN1 33 0 33.00 0.00 JMJD6^ENSG00000070495.15 4756 chr17:76721798:- ERN1^ENSG00000178607.17 28060 chr17:64080808:- ONLY_REF_SPLICE YES 136 263 0.25 0.13 GT 1.5058 AG 1.9656 0.1114 1569 0
PRDX6-AS1--RABGAP1L 31 1 31.00 0.36 PRDX6-AS1^ENSG00000203739.4 3555 chr1:173476632:- RABGAP1L^ENSG00000152061.23 31524 chr1:174275833:+ ONLY_REF_SPLICE YES 0 476 33.00 0.07 GT 1.9329 AG 1.8323 0.1058 4116 0
PRDX6-AS1--RABGAP1L 26 2 26.00 1.00 PRDX6-AS1^ENSG00000203739.4 8506 chr1:173440463:- RABGAP1L^ENSG00000152061.23 29724 chr1:174272414:+ ONLY_REF_SPLICE YES 0 479 29.00 0.06 GT 1.8062 AG 1.4566 0.0911 1916 0
PRDX6-AS1--RABGAP1L 12 2 12.00 0.46 PRDX6-AS1^ENSG00000203739.4 8506 chr1:173440463:- RABGAP1L^ENSG00000152061.23 31524 chr1:174275833:+ ONLY_REF_SPLICE YES 0 476 15.00 0.03 GT 1.8062 AG 1.8323 0.0421 2275 0
PRDX6-AS1--RABGAP1L 8 1 8.00 0.09 PRDX6-AS1^ENSG00000203739.4 5540 chr1:173460378:- RABGAP1L^ENSG00000152061.23 31524 chr1:174275833:+ ONLY_REF_SPLICE YES 0 476 10.00 0.02 GT 1.8892 AG 1.8323 0.0273 3792 0
PRDX6-AS1--RABGAP1L 5 1 5.00 0.06 PRDX6-AS1^ENSG00000203739.4 5540 chr1:173460378:- RABGAP1L^ENSG00000152061.23 29724 chr1:174272414:+ ONLY_REF_SPLICE YES 0 479 7.00 0.01 GT 1.8892 AG 1.4566 0.0171 2363 0
PRDX6-AS1--RABGAP1L 1 1 1.00 0.01 PRDX6-AS1^ENSG00000203739.4 7218 chr1:173441919:- RABGAP1L^ENSG00000152061.23 31524 chr1:174275833:+ ONLY_REF_SPLICE YES 0 476 3.00 0.01 GT 1.9656 AG 1.8323 0.0034 2648 0
PRDX6-AS1--RABGAP1L 1 1 1.00 0.01 PRDX6-AS1^ENSG00000203739.4 3555 chr1:173476632:- RABGAP1L^ENSG00000152061.23 29724 chr1:174272414:+ ONLY_REF_SPLICE YES 0 479 3.00 0.01 GT 1.9329 AG 1.4566 0.0034 2421 0
AC004918.3--ULK4 27 0 27.00 0.00 AC004918.3^ENSG00000270157.1 1940 chr7:141662907:- ULK4^ENSG00000168038.11 20136 chr3:41900829:- INCL_NON_REF_SPLICE YES 0 235 28.00 0.12 GT 1.7465 AG 1.9219 0.0911 845 0
AC004918.3--ULK4 3 0 3.00 0.00 AC004918.3^ENSG00000270157.1 1212 chr7:141663635:- ULK4^ENSG00000168038.11 20136 chr3:41900829:- INCL_NON_REF_SPLICE YES 0 235 4.00 0.02 GT 1.7819 AG 1.9219 0.0101 150 0
COP1--PRDX6-AS1 25 1 25.00 1.00 COP1^ENSG00000143207.21 14721 chr1:176085776:- PRDX6-AS1^ENSG00000203739.4 39532 chr1:173418622:- ONLY_REF_SPLICE YES 432 0 0.06 27.00 GT 1.8892 AG 1.7056 0.0878 2285 0
IRS2--CYFIP1 22 0 22.00 0.00 IRS2^ENSG00000185950.9 5542 chr13:109782042:- CYFIP1^ENSG00000273749.5 15672 chr15:22947291:- ONLY_REF_SPLICE YES 196 1119 0.12 0.02 GT 1.9086 AG 1.7056 0.0742 1154 0
KIAA1671--AC007731.2 19 0 19.00 0.00 KIAA1671^ENSG00000197077.13 11917 chr22:25049364:+ AC007731.2^ENSG00000235578.1 34440 chr22:20344365:- ONLY_REF_SPLICE YES 361 0 0.06 20.00 GT 1.7819 AG 1.9329 0.0641 1037 0
ZNF431--FGF13 18 0 18.00 0.00 ZNF431^ENSG00000196705.8 4503 chr19:21166461:+ FGF13^ENSG00000129682.16 32193 chrX:138857679:- ONLY_REF_SPLICE YES 174 37 0.11 0.50 GT 1.8062 AG 1.9329 0.0607 5698 0
ZNF431--FGF13 2 0 2.00 0.00 ZNF431^ENSG00000196705.8 4503 chr19:21166461:+ FGF13^ENSG00000129682.16 36374 chrX:138708928:- ONLY_REF_SPLICE YES 174 43 0.02 0.07 GT 1.8062 AG 1.9899 0.0067 4917 0
TGS1--AC138035.1 10 1 10.00 1.00 TGS1^ENSG00000137574.11 14043 chr8:55813118:+ AC138035.1^ENSG00000238035.8 23678 chr5:181317331:+ ONLY_REF_SPLICE YES 115 0 0.10 12.00 GT 1.9899 AG 1.9899 0.0371 2017 0
PCDHGA5--PCDHGB6 3 1 3.00 0.01 PCDHGA5^ENSG00000253485.2 3520 chr5:141366751:+ PCDHGB6^ENSG00000253305.2 8800 chr5:141409268:+ INCL_NON_REF_SPLICE YES 0 183 5.00 0.03 GT 1.8892 AG 1.7819 0.0101 478 0
66 rows