#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	234	0	234.00	0.00	FGFR3^ENSG00000068078.20	10153	chr4:1807209:+	TACC3^ENSG00000013810.20	27389	chr4:1739501:+	INCL_NON_REF_SPLICE	YES	501	291	0.47	0.80	CC	1.9329	CC	1.7819	1.1523	490	0
FGFR3--TACC3	24	0	24.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	439	2506	0.06	0.01	GT	1.8892	AG	1.7819	0.1182	627	0
CCSER2--ZNF365	150	0	150.00	0.00	CCSER2^ENSG00000107771.17	1223	chr10:84328808:+	ZNF365^ENSG00000138311.18	28966	chr10:62376181:+	ONLY_REF_SPLICE	YES	102	33	1.47	4.44	GT	1.6402	AG	1.7819	0.7387	1236	0
CCSER2--ZNF365	72	0	72.00	0.00	CCSER2^ENSG00000107771.17	1223	chr10:84328808:+	ZNF365^ENSG00000138311.18	30722	chr10:62388396:+	ONLY_REF_SPLICE	YES	102	128	0.71	0.57	GT	1.6402	AG	1.9086	0.3546	2115	0
CCSER2--ZNF365	2	0	2.00	0.00	CCSER2^ENSG00000107771.17	1223	chr10:84328808:+	ZNF365^ENSG00000138311.18	36622	chr10:62459741:+	ONLY_REF_SPLICE	YES	102	37	0.03	0.08	GT	1.6402	AG	1.8892	0.0098	1978	0
SNU13--SEC14L3	134	0	134.00	0.00	SNU13^ENSG00000100138.15	6709	chr22:41680244:-	SEC14L3^ENSG00000100012.12	14486	chr22:30470582:-	ONLY_REF_SPLICE	YES	170	20	0.79	6.43	GT	1.7056	AG	1.9656	0.6599	1039	0
AGAP12P--FRMPD2	129	0	129.00	0.00	AGAP12P^ENSG00000265018.6	3807	chr10:48025897:-	FRMPD2^ENSG00000170324.21	35365	chr10:48181008:-	ONLY_REF_SPLICE	YES	439	5	0.30	21.67	GT	1.7465	AG	1.5656	0.6353	1060	0
TLK2--AC240565.1	114	0	114.00	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	285	26	0.40	4.26	GT	1.8892	AG	1.8892	0.5614	1734	0
TLK2--AC240565.1	1	0	1.00	0.00	TLK2^ENSG00000146872.18	16026	chr17:62553755:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	389	26	0.01	0.07	GT	1.5219	AG	1.8892	0.0049	1160	0
HIC2--MAPK1	98	0	49.00	0.00	HIC2^ENSG00000169635.10	1190	chr22:21417560:+	MAPK1^ENSG00000100030.15	19102	chr22:21788808:-	ONLY_REF_SPLICE	YES	126	269	0.78	0.37	GT	1.5656	AG	1.8892	0.2413	2513	0
PI4KAP1--MAPK1	98	0	49.00	0.00	PI4KAP1^ENSG00000274602.5	1196	chr22:18577773:-	MAPK1^ENSG00000100030.15	23716	chr22:21788808:-	ONLY_REF_SPLICE	YES	65	269	1.50	0.37	GT	1.5656	AG	1.8892	0.2413	3061	0
MYO15B--QRICH2	77	0	77.00	0.00	MYO15B^ENSG00000266714.9	11027	chr17:75601563:+	QRICH2^ENSG00000129646.15	53597	chr17:76274243:-	ONLY_REF_SPLICE	YES	58	151	1.32	0.51	GT	1.8892	AG	1.8892	0.3792	105	0
MYO15B--QRICH2	1	0	1.00	0.00	MYO15B^ENSG00000266714.9	9069	chr17:75596899:+	QRICH2^ENSG00000129646.15	53597	chr17:76274243:-	ONLY_REF_SPLICE	YES	86	151	0.02	0.01	GT	1.9656	AG	1.8892	0.0049	78	1
CCDC169--SOHLH2	70	0	70.00	0.00	CCDC169^ENSG00000242715.8	10007	chr13:36248606:-	SOHLH2^ENSG00000120669.16	24280	chr13:36202093:-	ONLY_REF_SPLICE	YES	20	5	3.38	11.83	GT	1.8295	AG	1.7232	0.3447	1362	0
PTPRK--ARID1B	70	0	70.00	0.00	PTPRK^ENSG00000152894.15	17295	chr6:128184432:-	ARID1B^ENSG00000049618.24	85156	chr6:157084662:+	ONLY_REF_SPLICE	YES	206	249	0.34	0.28	GT	1.7968	AG	1.8256	0.3447	1914	0
PTPRK--ARID1B	1	0	1.00	0.00	PTPRK^ENSG00000152894.15	7132	chr6:128322039:-	ARID1B^ENSG00000049618.24	85156	chr6:157084662:+	ONLY_REF_SPLICE	YES	413	249	0.00	0.01	GT	1.8892	AG	1.8256	0.0049	1340	0
MAPRE1--DNMT3B	65	0	65.00	0.00	MAPRE1^ENSG00000101367.9	1075	chr20:32820028:+	DNMT3B^ENSG00000088305.18	14344	chr20:32780318:+	ONLY_REF_SPLICE	YES	54	320	1.20	0.21	GT	1.9086	AG	1.5628	0.3201	6398	0
DIP2C--AC013287.1	62	0	62.00	0.00	DIP2C^ENSG00000151240.17	1175	chr10:689494:-	AC013287.1^ENSG00000228566.2	57950	chr10:64691442:+	ONLY_REF_SPLICE	YES	347	0	0.18	63.00	GT	1.8295	AG	1.4566	0.3053	2193	0
DIP2C--AC013287.1	3	0	3.00	0.00	DIP2C^ENSG00000151240.17	1175	chr10:689494:-	AC013287.1^ENSG00000228566.2	59001	chr10:64692493:+	ONLY_REF_SPLICE	YES	347	0	0.01	4.00	GT	1.8295	AG	1.9086	0.0148	1348	0
HPS4--SLC5A4	57	0	57.00	0.00	HPS4^ENSG00000100099.21	8949	chr22:26472302:-	SLC5A4^ENSG00000100191.6	38450	chr22:32229344:-	ONLY_REF_SPLICE	YES	66	55	0.87	1.04	GT	1.8295	AG	1.8892	0.2807	611	0
ZFAND3--TINAG	55	0	55.00	0.00	ZFAND3^ENSG00000156639.12	6558	chr6:38082457:+	TINAG^ENSG00000137251.16	17844	chr6:54308597:+	ONLY_REF_SPLICE	YES	109	5	0.51	9.33	GT	1.9656	AG	1.7819	0.2708	3285	0
ZFAND3--TINAG	4	0	4.00	0.00	ZFAND3^ENSG00000156639.12	4607	chr6:38061775:+	TINAG^ENSG00000137251.16	17844	chr6:54308597:+	ONLY_REF_SPLICE	YES	164	5	0.03	0.83	GT	1.7056	AG	1.7819	0.0197	5234	0
ZFAND3--TINAG	1	0	1.00	0.00	ZFAND3^ENSG00000156639.12	4607	chr6:38061775:+	TINAG^ENSG00000137251.16	19153	chr6:54320579:+	ONLY_REF_SPLICE	YES	164	23	0.01	0.08	GT	1.7056	AG	1.9329	0.0049	5342	0
ACO2--ENTHD1	54	0	54.00	0.00	ACO2^ENSG00000100412.17	22115	chr22:41523941:+	ENTHD1^ENSG00000176177.10	35964	chr22:39821113:-	ONLY_REF_SPLICE	YES	164	2	0.33	18.33	GT	1.8892	AG	1.9656	0.2659	1572	0
PPA1--AC124864.2	51	0	51.00	0.00	PPA1^ENSG00000180817.12	6837	chr10:70213463:-	AC124864.2^ENSG00000286103.1	17707	chr21:9677372:+	ONLY_REF_SPLICE	YES	1578	0	0.03	52.00	GT	1.8892	AG	1.8892	0.2511	1995	0
BCL2L13--TOM1	44	0	44.00	0.00	BCL2L13^ENSG00000099968.18	5215	chr22:17683321:+	TOM1^ENSG00000100284.22	23444	chr22:35317877:+	ONLY_REF_SPLICE	YES	132	106	0.34	0.42	GT	1.7465	AG	1.7465	0.2167	2846	0
PCDHA11--PCDHAC1	44	0	22.00	0.00	PCDHA11^ENSG00000249158.7	4312	chr5:140871494:+	PCDHAC1^ENSG00000248383.5	12566	chr5:140978949:+	INCL_NON_REF_SPLICE	YES	6	4	6.43	9.00	GT	1.7819	AG	1.3996	0.1083	1419	0
PCDHA11--PCDHAC2	44	0	22.00	0.00	PCDHA11^ENSG00000249158.7	4312	chr5:140871494:+	PCDHAC2^ENSG00000243232.6	11430	chr5:140978949:+	INCL_NON_REF_SPLICE	YES	6	6	6.43	6.43	GT	1.7819	AG	1.3996	0.1083	1466	0
TRIOBP--KCNJ4	40	0	40.00	0.00	TRIOBP^ENSG00000100106.22	19459	chr22:37751828:+	KCNJ4^ENSG00000168135.4	38521	chr22:38428171:-	ONLY_REF_SPLICE	YES	121	12	0.34	3.15	GT	1.7465	AG	1.4566	0.197	773	0
PHF21B--ATXN10	39	0	39.00	0.00	PHF21B^ENSG00000056487.16	2461	chr22:45008545:-	ATXN10^ENSG00000130638.17	42192	chr22:45806959:+	ONLY_REF_SPLICE	YES	10	406	3.64	0.10	GT	1.6895	AG	1.8256	0.1921	1025	0
B3GNTL1--FOXK2	38	1	38.00	0.90	B3GNTL1^ENSG00000175711.8	14863	chr17:82956695:-	FOXK2^ENSG00000141568.21	27457	chr17:82563354:+	ONLY_REF_SPLICE	YES	36	207	1.08	0.19	GT	1.9656	AG	1.9656	0.1915	3444	0
B3GNTL1--FOXK2	4	1	4.00	0.10	B3GNTL1^ENSG00000175711.8	17377	chr17:82948435:-	FOXK2^ENSG00000141568.21	25277	chr17:82520269:+	INCL_NON_REF_SPLICE	NO	15	189	0.38	0.03	CC	1.5656	TT	1.3996	0.0202	1375	0
ATRN--HM13	37	0	37.00	0.00	ATRN^ENSG00000088812.18	1500	chr20:3471517:+	HM13^ENSG00000101294.18	41065	chr20:31514481:+	INCL_NON_REF_SPLICE	YES	175	155	0.22	0.24	GT	1.6895	AG	1.7819	0.1822	265	0
ATRN--HM13	4	0	4.00	0.00	ATRN^ENSG00000088812.18	1500	chr20:3471517:+	HM13^ENSG00000101294.18	42319	chr20:31527484:+	ONLY_REF_SPLICE	YES	175	2313	0.03	0.00	GT	1.6895	AG	1.9656	0.0197	1061	0
TVP23C--CDRT4	35	0	35.00	0.00	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	INCL_NON_REF_SPLICE	YES	57	10	0.62	3.27	GT	1.9329	AG	1.9899	0.1724	1215	0
TVP23C--CDRT4	33	0	33.00	0.00	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	47	10	0.71	3.09	GT	1.9086	AG	1.9899	0.1625	1774	0
TVP23C--CDRT4	28	0	28.00	0.00	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	INCL_NON_REF_SPLICE	YES	57	37	0.50	0.76	GT	1.9329	AG	1.6402	0.1379	137	0
TVP23C--CDRT4	12	0	12.00	0.00	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	47	37	0.27	0.34	GT	1.9086	AG	1.6402	0.0591	697	0
TVP23C--CDRT4	9	0	9.00	0.00	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	11	10	0.83	0.91	GT	1.8892	AG	1.9899	0.0443	1949	0
BCLAF1--BEND3	29	0	29.00	0.00	BCLAF1^ENSG00000029363.17	1139	chr6:136289713:-	BEND3^ENSG00000178409.14	27430	chr6:107099296:-	ONLY_REF_SPLICE	YES	22	6	1.30	4.29	GT	1.8892	AG	1.6895	0.1428	2531	0
BCLAF1--BEND3	1	0	1.00	0.00	BCLAF1^ENSG00000029363.17	1139	chr6:136289713:-	BEND3^ENSG00000178409.14	29176	chr6:107070950:-	ONLY_REF_SPLICE	YES	22	107	0.09	0.02	GT	1.8892	AG	1.8892	0.0049	786	0
NOL4L--TM9SF4	29	0	29.00	0.00	NOL4L^ENSG00000197183.14	10389	chr20:32511347:-	TM9SF4^ENSG00000101337.16	31741	chr20:32133013:+	ONLY_REF_SPLICE	YES	221	277	0.14	0.11	GT	1.9329	AG	1.6895	0.1428	3572	0
RTKN2--CDH23	27	0	27.00	0.00	RTKN2^ENSG00000182010.11	2491	chr10:62262625:-	CDH23^ENSG00000107736.22	33524	chr10:71566742:+	ONLY_REF_SPLICE	YES	73	33	0.38	0.82	GT	1.9086	AG	1.9086	0.133	6759	0
RAP1GAP2--GSDMA	26	0	26.00	0.00	RAP1GAP2^ENSG00000132359.15	6658	chr17:2905368:+	GSDMA^ENSG00000167914.12	37480	chr17:39965683:+	ONLY_REF_SPLICE	YES	31	7	0.84	3.38	GT	1.7968	AG	1.9219	0.128	2159	0
CECR2--PSLNR	23	0	23.00	0.00	CECR2^ENSG00000099954.18	2619	chr22:17369909:+	PSLNR^ENSG00000225255.6	38657	chr22:15778010:+	ONLY_REF_SPLICE	YES	10	0	2.18	24.00	GT	1.9656	AG	1.6049	0.1133	421	0
AC092807.3--DDAH1	22	0	22.00	0.00	AC092807.3^ENSG00000282057.1	5553	chr1:85496166:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	38	23.00	0.59	GT	1.5628	AG	1.8062	0.1083	3011	0
AC092807.3--DDAH1	2	0	2.00	0.00	AC092807.3^ENSG00000282057.1	1267	chr1:85577984:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	38	3.00	0.08	GT	1.8062	AG	1.8062	0.0098	2484	0
GATD1--CHID1	19	0	19.00	0.00	GATD1^ENSG00000177225.17	4430	chr11:773522:-	CHID1^ENSG00000177830.18	30203	chr11:870163:-	ONLY_REF_SPLICE	YES	220	161	0.09	0.12	GT	1.9656	AG	1.6729	0.0936	673	0
TXN2--APOL1	17	0	17.00	0.00	TXN2^ENSG00000100348.10	3190	chr22:36476733:-	APOL1^ENSG00000100342.21	14520	chr22:36261596:+	ONLY_REF_SPLICE	YES	308	50	0.06	0.35	GT	1.9329	AG	1.9086	0.0837	2021	0
TXN2--APOL1	1	0	1.00	0.00	TXN2^ENSG00000100348.10	2066	chr22:36480575:-	APOL1^ENSG00000100342.21	14520	chr22:36261596:+	ONLY_REF_SPLICE	YES	117	50	0.02	0.04	GT	1.9656	AG	1.9086	0.0049	1653	0
MCM5--CPT1B	14	0	14.00	0.00	MCM5^ENSG00000100297.16	1075	chr22:35400208:+	CPT1B^ENSG00000205560.13	30709	chr22:50571539:-	ONLY_REF_SPLICE	YES	34	106	0.43	0.14	GT	1.7819	AG	1.9086	0.0689	1212	0
MICALL1--LINC02885	14	0	14.00	0.00	MICALL1^ENSG00000100139.14	1912	chr22:37906568:+	LINC02885^ENSG00000286592.1	25635	chr22:34902763:-	ONLY_REF_SPLICE	YES	230	0	0.06	15.00	GT	1.6402	AG	1.9656	0.0689	2689	0
ZNRF3--NIPSNAP1	13	0	13.00	0.00	ZNRF3^ENSG00000183579.16	1495	chr22:28884066:+	NIPSNAP1^ENSG00000184117.12	19435	chr22:29581316:-	INCL_NON_REF_SPLICE	YES	42	0	0.33	14.00	GT	1.8295	AG	1.8892	0.064	299	0
NF1--CYB561	12	0	12.00	0.00	NF1^ENSG00000196712.18	40424	chr17:31265339:+	CYB561^ENSG00000008283.16	86220	chr17:63435243:-	ONLY_REF_SPLICE	YES	132	199	0.10	0.07	GT	1.9086	AG	1.5058	0.0591	2063	0