File Info

Filename
659_epP-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/fusioninspector/659_epP-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
Size
9.0 KB
Workflow Run
dev_rna_exp09_10-3b7a596a
Published
Jun 04, 2026 4:50 PM

Content

View in new tab
#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
NCOA4--RET 1084 5 1084.00 4.99 NCOA4^ENSG00000266412.6 11871 chr10:46009411:- RET^ENSG00000165731.20 30127 chr10:43116584:+ ONLY_REF_SPLICE YES 478 155 2.28 6.99 GT 1.8892 AG 1.8323 3.6819 5226 0
NCOA4--RET 9 1 9.00 0.01 NCOA4^ENSG00000266412.6 11059 chr10:46010223:- RET^ENSG00000165731.20 30127 chr10:43116584:+ ONLY_REF_SPLICE YES 1011 155 0.01 0.07 GT 1.5656 AG 1.8323 0.0304 5099 0
TVP23C--CDRT4 338 6 338.00 5.16 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 256 36 1.34 9.32 GT 1.9329 AG 1.9899 1.1602 1215 0
TVP23C--CDRT4 79 1 79.00 0.17 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 618 36 0.13 2.19 GT 1.8323 AG 1.9899 0.2677 2126 0
TVP23C--CDRT4 75 2 75.00 0.35 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 256 121 0.30 0.64 GT 1.9329 AG 1.6402 0.2548 137 0
TVP23C--CDRT4 43 2 43.00 0.20 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 26 36 1.70 1.24 GT 1.8892 AG 1.9899 0.1461 1949 0
TVP23C--CDRT4 14 0 14.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 618 121 0.02 0.12 GT 1.8323 AG 1.6402 0.0473 1363 0
TVP23C--CDRT4 8 6 8.00 0.12 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- INCL_NON_REF_SPLICE YES 256 1 0.06 7.50 GT 1.9329 AG 1.8892 0.0274 1153 0
TVP23C--CDRT4 3 0 3.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 26 121 0.15 0.03 GT 1.8892 AG 1.6402 0.0101 873 0
TVP23C--CDRT4 1 1 1.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 618 1 0.00 1.50 GT 1.8323 AG 1.8892 0.0034 1044 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 644 121 0.00 0.02 GT 1.9086 AG 1.6402 0.0034 697 0
PMS2P6--CCDC146 271 2 271.00 1.50 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 10176 chr7:77167658:+ ONLY_REF_SPLICE YES 205 31 1.33 8.56 GT 1.4566 AG 1.7465 0.9213 6786 0
PMS2P6--CCDC146 52 2 52.00 0.29 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 10176 chr7:77167658:+ ONLY_REF_SPLICE YES 41 31 1.31 1.72 GT 1.8323 AG 1.7465 0.1768 7283 0
PMS2P6--CCDC146 23 2 23.00 0.13 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 11343 chr7:77236947:+ ONLY_REF_SPLICE YES 205 172 0.13 0.15 GT 1.4566 AG 1.9329 0.0782 5731 0
PMS2P6--CCDC146 16 2 16.00 0.09 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 11343 chr7:77236947:+ ONLY_REF_SPLICE YES 41 172 0.45 0.11 GT 1.8323 AG 1.9329 0.0544 6311 0
PMS2P6--CCDC146 2 0 2.00 0.00 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 12426 chr7:77241691:+ ONLY_REF_SPLICE YES 41 177 0.07 0.02 GT 1.8323 AG 1.7465 0.0068 5479 0
PMS2P6--CCDC146 1 0 1.00 0.00 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 12426 chr7:77241691:+ ONLY_REF_SPLICE YES 205 177 0.01 0.01 GT 1.4566 AG 1.7465 0.0034 4799 0
TLK2--AC240565.1 206 0 206.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 475 73 0.43 2.80 GT 1.8892 AG 1.8892 0.6965 1734 0
STX16--NPEPL1 127 0 127.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 978 78 0.13 1.62 GT 1.7968 AG 1.8256 0.4294 1940 0
STX16--NPEPL1 4 0 4.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 926 78 0.01 0.06 GT 1.8062 AG 1.8256 0.0135 2729 0
CRYZL2P--SEC16B 111 3 111.00 2.52 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 1 78 57.50 1.46 GT 1.9086 AG 1.5546 0.3838 2589 0
CRYZL2P--SEC16B 16 3 16.00 0.36 CRYZL2P^ENSG00000242193.11 11220 chr1:178022440:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 0 78 20.00 0.25 GT 1.9656 AG 1.5546 0.0553 2635 0
CRYZL2P--SEC16B 5 3 5.00 0.11 CRYZL2P^ENSG00000242193.11 8837 chr1:178026143:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- INCL_NON_REF_SPLICE YES 1 78 4.50 0.11 GT 1.8323 AG 1.5546 0.0173 2584 0
CRYZL2P--SEC16B 3 0 3.00 0.00 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 26248 chr1:177958975:- ONLY_REF_SPLICE YES 1 787 2.00 0.01 GT 1.9086 AG 1.7465 0.0101 3251 0
CRYZL2P--SEC16B 3 0 3.00 0.00 CRYZL2P^ENSG00000242193.11 4246 chr1:178034705:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 0 78 4.00 0.05 GT 1.6895 AG 1.5546 0.0101 1888 0
SEC24B--MCUB 101 4 101.00 3.91 SEC24B^ENSG00000138802.11 1231 chr4:109434002:+ MCUB^ENSG00000005059.16 33854 chr4:109659011:+ ONLY_REF_SPLICE YES 671 229 0.16 0.46 GT 1.5656 AG 1.7056 0.3547 1114 0
SEC24B--MCUB 10 1 10.00 0.09 SEC24B^ENSG00000138802.11 1231 chr4:109434002:+ MCUB^ENSG00000005059.16 34930 chr4:109660195:+ ONLY_REF_SPLICE YES 671 183 0.02 0.07 GT 1.5656 AG 1.5628 0.0341 185 0
SEC24B--MCUB 2 0 2.00 0.00 SEC24B^ENSG00000138802.11 1231 chr4:109434002:+ MCUB^ENSG00000005059.16 38241 chr4:109682582:+ ONLY_REF_SPLICE YES 671 227 0.00 0.01 GT 1.5656 AG 1.6049 0.0068 2546 0
AL669831.4--SEPTIN14 76 1 76.00 1.00 AL669831.4^ENSG00000230092.7 4587 chr1:805799:- SEPTIN14^ENSG00000154997.9 19871 chr7:55796092:- ONLY_REF_SPLICE YES 39 53 1.95 1.44 GT 1.7819 AG 1.9899 0.2604 1425 0
AC015911.9--SLFN12L 48 1 48.00 0.94 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 6142 chr17:35480195:- ONLY_REF_SPLICE YES 0 47 50.00 1.04 GT 1.9329 AG 1.8892 0.1655 533 0
AC015911.9--SLFN12L 18 0 18.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000286065.2 8152 chr17:35478185:- ONLY_REF_SPLICE YES 0 52 19.00 0.36 GT 1.9329 AG 1.9329 0.0609 1380 0
AC015911.9--SLFN12L 3 1 3.00 0.06 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 4635 chr17:35487914:- INCL_NON_REF_SPLICE YES 0 0 5.00 5.00 GT 1.9329 AG 1.7819 0.0103 1749 0
AC015911.9--SLFN12L 2 0 2.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 9263 chr17:35475485:- ONLY_REF_SPLICE YES 0 82 3.00 0.04 GT 1.9329 AG 1.7968 0.0068 508 0
NPHP3--ACAD11 43 0 43.00 0.00 NPHP3^ENSG00000113971.20 29784 chr3:132681914:- ACAD11^ENSG00000240303.8 35570 chr3:132644896:- INCL_NON_REF_SPLICE YES 157 262 0.28 0.17 GT 1.7465 AG 1.7465 0.1454 1784 0
EXOC4--LRGUK 33 0 33.00 0.00 EXOC4^ENSG00000131558.15 34284 chr7:134007835:+ LRGUK^ENSG00000155530.3 67164 chr7:134263845:+ ONLY_REF_SPLICE YES 118 26 0.29 1.26 GT 1.9899 AG 1.5656 0.1116 389 0
STON1--GTF2A1L 19 2 19.00 1.34 STON1^ENSG00000243244.7 7715 chr2:48591855:+ GTF2A1L^ENSG00000242441.8 16320 chr2:48620851:+ ONLY_REF_SPLICE YES 119 3 0.18 5.50 GT 1.9086 AG 1.7819 0.0687 2355 0
STON1--GTF2A1L 9 1 9.00 0.27 STON1^ENSG00000243244.7 7715 chr2:48591855:+ GTF2A1L^ENSG00000242441.8 16636 chr2:48621167:+ ONLY_REF_SPLICE YES 119 17 0.09 0.61 GT 1.9086 AG 1.9329 0.0313 2369 0
STON1--GTF2A1L 6 0 6.00 0.00 STON1^ENSG00000243244.7 6512 chr2:48582563:+ GTF2A1L^ENSG00000242441.8 16636 chr2:48621167:+ ONLY_REF_SPLICE YES 88 17 0.08 0.39 GT 1.5546 AG 1.9329 0.0203 1187 0
STON1--GTF2A1L 4 3 4.00 1.35 STON1^ENSG00000243244.7 10867 chr2:48597379:+ GTF2A1L^ENSG00000242441.8 16320 chr2:48620851:+ INCL_NON_REF_SPLICE YES 0 3 8.00 2.00 GT 1.9899 AG 1.7819 0.0181 789 0
STON1--GTF2A1L 2 0 2.00 0.00 STON1^ENSG00000243244.7 7715 chr2:48591855:+ GTF2A1L^ENSG00000242441.8 18843 chr2:48645033:+ ONLY_REF_SPLICE YES 119 44 0.03 0.07 GT 1.9086 AG 1.8892 0.0068 1634 0
STON1--GTF2A1L 1 1 1.00 0.04 STON1^ENSG00000243244.7 6512 chr2:48582563:+ GTF2A1L^ENSG00000242441.8 16320 chr2:48620851:+ ONLY_REF_SPLICE YES 88 3 0.03 0.75 GT 1.5546 AG 1.7819 0.0035 1161 0
STON1--GTF2A1L 1 0 1.00 0.00 STON1^ENSG00000243244.7 6512 chr2:48582563:+ GTF2A1L^ENSG00000242441.8 18843 chr2:48645033:+ ONLY_REF_SPLICE YES 88 44 0.02 0.04 GT 1.5546 AG 1.8892 0.0034 1757 0
KLRC4--KLRK1 14 1 14.00 0.82 KLRC4^ENSG00000183542.5 3122 chr12:10407636:- KLRK1^ENSG00000213809.9 8583 chr12:10388875:- INCL_NON_REF_SPLICE YES 8 46 1.78 0.34 GT 1.3996 AG 1.9219 0.0501 1207 0
KLRC4--KLRK1 3 1 3.00 0.18 KLRC4^ENSG00000183542.5 3122 chr12:10407636:- KLRK1^ENSG00000213809.9 6360 chr12:10391891:- INCL_NON_REF_SPLICE YES 8 0 0.56 5.00 GT 1.3996 AG 1.6895 0.0107 3430 0
TKT--ARHGAP27 13 0 13.00 0.00 TKT^ENSG00000163931.16 6374 chr3:53237797:- ARHGAP27^ENSG00000159314.11 37420 chr17:45398047:- ONLY_REF_SPLICE YES 948 942 0.01 0.01 GT 1.9656 AG 1.9329 0.044 1181 0
46 rows