#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
PTPRK--RSPO3	763	11	763.00	10.99	PTPRK^ENSG00000152894.15	17295	chr6:128184432:-	RSPO3^ENSG00000146374.14	55391	chr6:127148648:+	ONLY_REF_SPLICE	YES	981	379	0.79	2.04	GT	1.7968	AG	1.9329	2.6111	1434	0
PTPRK--RSPO3	6	0	6.00	0.00	PTPRK^ENSG00000152894.15	1358	chr6:128520259:-	RSPO3^ENSG00000146374.14	55391	chr6:127148648:+	ONLY_REF_SPLICE	YES	2444	379	0.00	0.02	GT	1.8892	AG	1.9329	0.0202	1100	0
PTPRK--RSPO3	5	1	5.00	0.01	PTPRK^ENSG00000152894.15	17295	chr6:128184432:-	RSPO3^ENSG00000146374.14	56583	chr6:127150426:+	ONLY_REF_SPLICE	YES	981	1266	0.01	0.01	GT	1.7968	AG	1.9219	0.0169	1581	0
PTPRK--RSPO3	1	0	1.00	0.00	PTPRK^ENSG00000152894.15	17295	chr6:128184432:-	RSPO3^ENSG00000146374.14	57730	chr6:127155241:+	ONLY_REF_SPLICE	YES	981	1735	0.00	0.00	GT	1.7968	AG	1.9656	0.0034	1067	0
CD2AP--FILNC1	151	1	151.00	0.77	CD2AP^ENSG00000198087.7	3775	chr6:47533755:+	FILNC1^ENSG00000231426.7	33785	chr6:139856764:+	ONLY_REF_SPLICE	YES	1788	0	0.09	153.00	GT	1.4256	AG	1.7968	0.512	1628	0
CD2AP--FILNC1	44	1	44.00	0.23	CD2AP^ENSG00000198087.7	3775	chr6:47533755:+	FILNC1^ENSG00000231426.7	34841	chr6:139859285:+	ONLY_REF_SPLICE	YES	1788	0	0.03	46.00	GT	1.4256	AG	1.2310	0.1492	1085	0
ZFAND3--MRS2	119	1	119.00	1.00	ZFAND3^ENSG00000156639.12	2331	chr6:37929999:+	MRS2^ENSG00000124532.15	18435	chr6:24405168:+	ONLY_REF_SPLICE	YES	1309	1051	0.09	0.12	GT	1.9656	AG	1.9219	0.4048	1541	0
ZFAND3--MRS2	23	0	23.00	0.00	ZFAND3^ENSG00000156639.12	1290	chr6:37820016:+	MRS2^ENSG00000124532.15	18435	chr6:24405168:+	ONLY_REF_SPLICE	YES	1322	1051	0.02	0.02	GT	1.5301	AG	1.9219	0.0776	1066	0
ZFAND3--MRS2	1	0	1.00	0.00	ZFAND3^ENSG00000156639.12	2331	chr6:37929999:+	MRS2^ENSG00000124532.15	19509	chr6:24408408:+	ONLY_REF_SPLICE	YES	1309	635	0.00	0.00	GT	1.9656	AG	1.5546	0.0034	2411	0
ZFAND3--AL356534.1	114	1	114.00	0.93	ZFAND3^ENSG00000156639.12	2331	chr6:37929999:+	AL356534.1^ENSG00000286215.1	50522	chr6:126919646:-	ONLY_REF_SPLICE	YES	1310	1	0.09	58.00	GT	1.9656	AG	1.5058	0.3877	1759	0
ZFAND3--AL356534.1	4	1	4.00	0.03	ZFAND3^ENSG00000156639.12	1290	chr6:37820016:+	AL356534.1^ENSG00000286215.1	50522	chr6:126919646:-	ONLY_REF_SPLICE	YES	1322	1	0.00	3.00	GT	1.5301	AG	1.5058	0.0136	2516	0
ZFAND3--AL356534.1	4	1	4.00	0.03	ZFAND3^ENSG00000156639.12	2331	chr6:37929999:+	AL356534.1^ENSG00000286215.1	49299	chr6:126943608:-	ONLY_REF_SPLICE	YES	1310	1	0.00	3.00	GT	1.9656	AG	1.8062	0.0136	1054	0
ZFAND3--AL356534.1	3	0	3.00	0.00	ZFAND3^ENSG00000156639.12	2331	chr6:37929999:+	AL356534.1^ENSG00000286215.1	53808	chr6:126888338:-	ONLY_REF_SPLICE	YES	1310	1	0.00	2.00	GT	1.9656	AG	1.8892	0.0101	3085	0
AC092807.3--DDAH1	99	4	99.00	3.84	AC092807.3^ENSG00000282057.1	5553	chr1:85496166:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	1597	104.00	0.07	GT	1.5628	AG	1.8062	0.347	3011	0
AC092807.3--DDAH1	21	0	21.00	0.00	AC092807.3^ENSG00000282057.1	1267	chr1:85577984:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	1597	22.00	0.01	GT	1.8062	AG	1.8062	0.0708	2484	0
AC092807.3--DDAH1	2	4	2.00	0.08	AC092807.3^ENSG00000282057.1	6990	chr1:85494729:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	NO	0	1597	7.00	0.00	GT	1.8062	AG	1.8062	0.007	2313	0
AC092807.3--DDAH1	1	5	1.00	1.08	AC092807.3^ENSG00000282057.1	9402	chr1:85488291:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	NO	0	1597	7.00	0.00	GT	1.8892	AG	1.8062	0.007	2892	0
AC092807.3--DDAH1	1	0	1.00	0.00	AC092807.3^ENSG00000282057.1	2469	chr1:85576657:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	1597	2.00	0.00	GT	1.8892	AG	1.8062	0.0034	2786	0
AC092807.3--DDAH1	1	0	1.00	0.00	AC092807.3^ENSG00000282057.1	1267	chr1:85577984:-	DDAH1^ENSG00000153904.21	19477	chr1:85324883:-	ONLY_REF_SPLICE	YES	0	2130	2.00	0.00	GT	1.8062	AG	1.9219	0.0034	2152	0
TVP23C--CDRT4	72	1	72.00	0.40	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	710	6	0.10	10.57	GT	1.8323	AG	1.9899	0.2442	2126	0
TVP23C--CDRT4	64	1	64.00	0.35	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	INCL_NON_REF_SPLICE	YES	73	6	0.89	9.43	GT	1.9329	AG	1.9899	0.2171	1215	0
TVP23C--CDRT4	25	1	25.00	0.14	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	710	33	0.04	0.79	GT	1.8323	AG	1.6402	0.0848	1363	0
TVP23C--CDRT4	13	1	13.00	0.07	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	INCL_NON_REF_SPLICE	YES	73	33	0.20	0.44	GT	1.9329	AG	1.6402	0.0441	137	0
TVP23C--CDRT4	5	1	5.00	0.03	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	27	6	0.25	1.00	GT	1.8892	AG	1.9899	0.017	1949	0
TVP23C--CDRT4	2	1	2.00	0.01	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	286	6	0.01	0.57	GT	1.9086	AG	1.9899	0.0067	1774	0
TVP23C--CDRT4	1	1	1.00	0.01	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	21051	chr17:15453085:-	ONLY_REF_SPLICE	YES	710	1	0.00	1.50	GT	1.8323	AG	1.8892	0.0034	1044	0
SLC2A13--DCDC2	71	0	71.00	0.00	SLC2A13^ENSG00000151229.13	9367	chr12:39864762:-	DCDC2^ENSG00000146038.12	26142	chr6:24302044:-	ONLY_REF_SPLICE	YES	294	2	0.24	24.00	GT	1.9219	AG	1.8295	0.2395	1781	0
SLC2A13--DCDC2	1	0	1.00	0.00	SLC2A13^ENSG00000151229.13	5315	chr12:39951257:-	DCDC2^ENSG00000146038.12	26142	chr6:24302044:-	ONLY_REF_SPLICE	YES	385	2	0.01	0.67	GT	1.5656	AG	1.8295	0.0034	1379	0
SLC2A13--DCDC2	1	0	1.00	0.00	SLC2A13^ENSG00000151229.13	9367	chr12:39864762:-	DCDC2^ENSG00000146038.12	27472	chr6:24291078:-	ONLY_REF_SPLICE	YES	294	20	0.01	0.10	GT	1.9219	AG	1.7968	0.0034	1161	0
SLC2A13--DCDC2	1	0	1.00	0.00	SLC2A13^ENSG00000151229.13	1837	chr12:40105253:-	DCDC2^ENSG00000146038.12	31038	chr6:24205102:-	ONLY_REF_SPLICE	YES	625	37	0.00	0.05	GT	1.8892	AG	1.9086	0.0034	293	0
REPS1--ECHDC1	69	0	69.00	0.00	REPS1^ENSG00000135597.19	1732	chr6:138987530:-	ECHDC1^ENSG00000093144.19	34353	chr6:127331030:-	ONLY_REF_SPLICE	YES	860	216	0.08	0.32	GT	1.9656	AG	1.7968	0.2328	2826	0
REPS1--ECHDC1	22	0	22.00	0.00	REPS1^ENSG00000135597.19	1732	chr6:138987530:-	ECHDC1^ENSG00000093144.19	39817	chr6:127314896:-	ONLY_REF_SPLICE	YES	860	1654	0.03	0.01	GT	1.9656	AG	1.7819	0.0742	1522	0
REPS1--ECHDC1	5	0	5.00	0.00	REPS1^ENSG00000135597.19	1732	chr6:138987530:-	ECHDC1^ENSG00000093144.19	38211	chr6:127316502:-	ONLY_REF_SPLICE	YES	860	1524	0.01	0.00	GT	1.9656	AG	1.8892	0.0169	2902	0
REPS1--ECHDC1	2	0	2.00	0.00	REPS1^ENSG00000135597.19	1732	chr6:138987530:-	ECHDC1^ENSG00000093144.19	33516	chr6:127331867:-	ONLY_REF_SPLICE	YES	860	169	0.00	0.02	GT	1.9656	AG	1.8323	0.0067	2147	0
REPS1--ECHDC1	2	0	2.00	0.00	REPS1^ENSG00000135597.19	1732	chr6:138987530:-	ECHDC1^ENSG00000093144.19	43665	chr6:127290277:-	ONLY_REF_SPLICE	YES	860	1376	0.00	0.00	GT	1.9656	AG	1.9656	0.0067	2410	0
REPS1--ECHDC1	1	0	1.00	0.00	REPS1^ENSG00000135597.19	1732	chr6:138987530:-	ECHDC1^ENSG00000093144.19	36562	chr6:127327144:-	ONLY_REF_SPLICE	YES	860	844	0.00	0.00	GT	1.9656	AG	1.8892	0.0034	3973	0
HAS3--CYB5B	52	5	52.00	3.61	HAS3^ENSG00000103044.11	10716	chr16:69118477:+	CYB5B^ENSG00000103018.17	19287	chr16:69459093:+	INCL_NON_REF_SPLICE	YES	1966	2071	0.03	0.03	GT	1.9656	AG	1.7465	0.1876	1118	0
HAS3--CYB5B	29	3	29.00	0.93	HAS3^ENSG00000103044.11	5781	chr16:69113542:+	CYB5B^ENSG00000103018.17	19287	chr16:69459093:+	ONLY_REF_SPLICE	YES	272	2071	0.12	0.02	GT	1.7232	AG	1.7465	0.1009	1838	0
HAS3--CYB5B	5	3	5.00	0.16	HAS3^ENSG00000103044.11	7526	chr16:69115287:+	CYB5B^ENSG00000103018.17	19287	chr16:69459093:+	INCL_NON_REF_SPLICE	YES	113	2071	0.08	0.00	GT	1.5656	AG	1.7465	0.0174	1065	0
HAS3--CYB5B	3	5	3.00	0.21	HAS3^ENSG00000103044.11	10800	chr16:69118561:+	CYB5B^ENSG00000103018.17	19287	chr16:69459093:+	INCL_NON_REF_SPLICE	YES	795	2071	0.01	0.00	GT	1.6729	AG	1.7465	0.0108	1111	0
HAS3--CYB5B	3	3	3.00	0.10	HAS3^ENSG00000103044.11	7499	chr16:69115260:+	CYB5B^ENSG00000103018.17	19287	chr16:69459093:+	INCL_NON_REF_SPLICE	YES	215	2071	0.03	0.00	GT	1.6895	AG	1.7465	0.0104	1059	0
SNU13--LLPH	53	1	53.00	1.00	SNU13^ENSG00000100138.15	6709	chr22:41680244:-	LLPH^ENSG00000139233.7	14346	chr12:66129113:-	ONLY_REF_SPLICE	YES	2056	353	0.03	0.16	GT	1.7056	AG	1.8295	0.1822	2440	0
TLK2--AC240565.1	51	0	51.00	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	676	37	0.08	1.37	GT	1.8892	AG	1.8892	0.172	1734	0
TRERF1--RIPOR2	36	0	36.00	0.00	TRERF1^ENSG00000124496.12	12670	chr6:42258135:-	RIPOR2^ENSG00000111913.20	38314	chr6:24875817:-	ONLY_REF_SPLICE	YES	244	216	0.15	0.17	GT	1.9329	AG	1.7819	0.1214	4032	0
TRERF1--RIPOR2	9	0	9.00	0.00	TRERF1^ENSG00000124496.12	11603	chr6:42259339:-	RIPOR2^ENSG00000111913.20	38314	chr6:24875817:-	ONLY_REF_SPLICE	YES	282	216	0.04	0.05	GT	1.8256	AG	1.7819	0.0304	3877	0
TRERF1--RIPOR2	2	0	2.00	0.00	TRERF1^ENSG00000124496.12	8909	chr6:42264704:-	RIPOR2^ENSG00000111913.20	38314	chr6:24875817:-	ONLY_REF_SPLICE	YES	305	216	0.01	0.01	GT	1.5628	AG	1.7819	0.0067	2514	0
TRERF1--RIPOR2	1	0	1.00	0.00	TRERF1^ENSG00000124496.12	12670	chr6:42258135:-	RIPOR2^ENSG00000111913.20	39441	chr6:24873799:-	ONLY_REF_SPLICE	YES	244	304	0.01	0.01	GT	1.9329	AG	1.8892	0.0034	5125	0
AC015911.9--SLFN12L	26	2	26.00	2.00	AC015911.9^ENSG00000286030.2	1691	chr17:35522279:-	SLFN12L^ENSG00000205045.11	6142	chr17:35480195:-	ONLY_REF_SPLICE	YES	0	35	29.00	0.81	GT	1.9329	AG	1.8892	0.0944	533	0
AC015911.9--SLFN12L	12	0	12.00	0.00	AC015911.9^ENSG00000286030.2	1691	chr17:35522279:-	SLFN12L^ENSG00000286065.2	8152	chr17:35478185:-	ONLY_REF_SPLICE	YES	0	82	13.00	0.16	GT	1.9329	AG	1.9329	0.0405	1380	0
AC015911.9--SLFN12L	3	0	3.00	0.00	AC015911.9^ENSG00000286030.2	1691	chr17:35522279:-	SLFN12L^ENSG00000205045.11	9263	chr17:35475485:-	ONLY_REF_SPLICE	YES	0	68	4.00	0.06	GT	1.9329	AG	1.7968	0.0101	508	0
AC015911.9--SLFN12L	1	0	1.00	0.00	AC015911.9^ENSG00000286030.2	1691	chr17:35522279:-	SLFN12L^ENSG00000205045.11	12141	chr17:35464581:-	ONLY_REF_SPLICE	YES	0	0	2.00	2.00	GT	1.9329	AG	1.8323	0.0034	2111	0
PHF3--KIAA0408	23	1	23.00	1.00	PHF3^ENSG00000118482.12	1349	chr6:63636150:+	KIAA0408^ENSG00000189367.15	42063	chr6:127454101:-	ONLY_REF_SPLICE	YES	333	57	0.07	0.43	GT	1.6729	AG	1.7465	0.081	2223	0
PHF3--KIAA0408	5	0	5.00	0.00	PHF3^ENSG00000118482.12	1349	chr6:63636150:+	KIAA0408^ENSG00000189367.15	44283	chr6:127450352:-	ONLY_REF_SPLICE	YES	333	264	0.02	0.02	GT	1.6729	AG	1.9656	0.0169	597	0
UBA6--NAA11	17	0	17.00	0.00	UBA6^ENSG00000033178.13	12935	chr4:67662189:-	NAA11^ENSG00000156269.5	43212	chr4:79317791:-	ONLY_REF_SPLICE	YES	1192	142	0.02	0.13	GT	1.8323	AG	1.9086	0.0573	99	1
UBA6--NAA11	2	0	2.00	0.00	UBA6^ENSG00000033178.13	12935	chr4:67662189:-	NAA11^ENSG00000156269.5	46467	chr4:79226270:-	ONLY_REF_SPLICE	YES	1192	0	0.00	3.00	GT	1.8323	AG	1.7232	0.0067	560	0
HECA--UTRN	14	0	14.00	0.00	HECA^ENSG00000112406.5	1588	chr6:139135667:+	UTRN^ENSG00000152818.18	13768	chr6:144291737:+	ONLY_REF_SPLICE	YES	451	186	0.03	0.08	GT	1.8062	AG	1.9329	0.0472	2873	0
LINC00271--ALDH5A1	12	0	12.00	0.00	LINC00271^ENSG00000231028.9	1579	chr6:135498000:+	ALDH5A1^ENSG00000112294.14	39608	chr6:24515167:+	ONLY_REF_SPLICE	YES	0	618	13.00	0.02	GT	1.7968	AG	1.9656	0.0405	481	0
LINC00271--ALDH5A1	12	0	12.00	0.00	LINC00271^ENSG00000231028.9	2096	chr6:135498517:+	ALDH5A1^ENSG00000112294.14	39608	chr6:24515167:+	ONLY_REF_SPLICE	YES	0	618	13.00	0.02	GT	1.7232	AG	1.9656	0.0405	217	0
LINC00271--ALDH5A1	2	0	2.00	0.00	LINC00271^ENSG00000231028.9	2096	chr6:135498517:+	ALDH5A1^ENSG00000112294.14	41154	chr6:24520401:+	ONLY_REF_SPLICE	YES	0	582	3.00	0.01	GT	1.7232	AG	1.8892	0.0067	1333	0
LINC00271--ALDH5A1	1	0	1.00	0.00	LINC00271^ENSG00000231028.9	1579	chr6:135498000:+	ALDH5A1^ENSG00000112294.14	41154	chr6:24520401:+	ONLY_REF_SPLICE	YES	0	582	2.00	0.00	GT	1.7968	AG	1.8892	0.0034	1401	0
LINC00271--ALDH5A1	1	0	1.00	0.00	LINC00271^ENSG00000231028.9	7541	chr6:135518830:+	ALDH5A1^ENSG00000112294.14	39608	chr6:24515167:+	ONLY_REF_SPLICE	YES	0	618	2.00	0.00	GT	1.8323	AG	1.9656	0.0034	2571	0
GTF2A1L--STON1-GTF2A1L	10	0	10.00	0.00	GTF2A1L^ENSG00000242441.8	8867	chr2:48671680:+	STON1-GTF2A1L^ENSG00000068781.21	15563	chr2:48776280:+	ONLY_REF_SPLICE	YES	24	6	0.44	1.57	GT	1.8256	AG	1.7819	0.0337	1034	0
PPFIBP1--TRERF1	9	1	9.00	1.00	PPFIBP1^ENSG00000110841.14	7725	chr12:27633460:+	TRERF1^ENSG00000124496.12	46856	chr6:42269848:-	ONLY_REF_SPLICE	YES	712	5	0.02	1.83	GT	1.9329	AG	1.8892	0.0338	785	0
PPFIBP1--TRERF1	2	0	2.00	0.00	PPFIBP1^ENSG00000110841.14	4200	chr12:27578239:+	TRERF1^ENSG00000124496.12	46856	chr6:42269848:-	ONLY_REF_SPLICE	YES	343	5	0.01	0.50	GT	1.6895	AG	1.8892	0.0067	1129	0
CUL9--AL592429.2	2	2	2.00	0.86	CUL9^ENSG00000112659.14	9725	chr6:43196862:+	AL592429.2^ENSG00000226571.2	49940	chr6:139649598:+	ONLY_REF_SPLICE	YES	749	0	0.01	5.00	GT	1.8323	AG	1.9899	0.0096	504	0
CUL9--AL592429.2	1	2	1.00	0.43	CUL9^ENSG00000112659.14	9725	chr6:43196862:+	AL592429.2^ENSG00000226571.2	51090	chr6:139651864:+	ONLY_REF_SPLICE	YES	749	0	0.01	4.00	GT	1.8323	AG	1.5329	0.0049	1243	0
CUL9--AL592429.2	1	2	1.00	0.43	CUL9^ENSG00000112659.14	9725	chr6:43196862:+	AL592429.2^ENSG00000226571.2	48727	chr6:139647980:+	ONLY_REF_SPLICE	YES	749	0	0.01	4.00	GT	1.8323	AG	1.7465	0.0049	1316	0
CUL9--AL592429.2	1	1	1.00	0.14	CUL9^ENSG00000112659.14	7931	chr6:43193208:+	AL592429.2^ENSG00000226571.2	51090	chr6:139651864:+	ONLY_REF_SPLICE	YES	1472	0	0.00	3.00	GT	1.6402	AG	1.5329	0.0039	1712	0
CUL9--AL592429.2	1	1	1.00	0.14	CUL9^ENSG00000112659.14	7931	chr6:43193208:+	AL592429.2^ENSG00000226571.2	48727	chr6:139647980:+	ONLY_REF_SPLICE	YES	1472	0	0.00	3.00	GT	1.6402	AG	1.7465	0.0039	1765	0
CUL9--AL592429.2	1	0	1.00	0.00	CUL9^ENSG00000112659.14	9725	chr6:43196862:+	AL592429.2^ENSG00000226571.2	53309	chr6:139667098:+	ONLY_REF_SPLICE	YES	749	0	0.00	2.00	GT	1.8323	AG	1.8323	0.0034	174	0
CUL9--AL592429.2	1	0	1.00	0.00	CUL9^ENSG00000112659.14	5883	chr6:43188118:+	AL592429.2^ENSG00000226571.2	53309	chr6:139667098:+	ONLY_REF_SPLICE	YES	778	0	0.00	2.00	GT	1.7465	AG	1.8323	0.0034	2086	0