#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
TMPRSS2--ERG	9895	0	9895.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	36539	chr21:38445621:-	ONLY_REF_SPLICE	YES	2613	948	3.79	10.43	GT	1.6895	AG	1.9656	35.7228	350	0
TMPRSS2--ERG	1361	9	1361.00	8.48	TMPRSS2^ENSG00000184012.14	4783	chr21:41507950:-	ERG^ENSG00000157554.19	36539	chr21:38445621:-	ONLY_REF_SPLICE	YES	3389	948	0.40	1.44	GT	1.3996	AG	1.9656	4.9441	251	0
TMPRSS2--ERG	75	10	75.00	1.47	TMPRSS2^ENSG00000184012.14	6288	chr21:41506445:-	ERG^ENSG00000157554.19	36539	chr21:38445621:-	ONLY_REF_SPLICE	YES	2467	948	0.03	0.09	GT	1.8892	AG	1.9656	0.2761	1348	0
TMPRSS2--ERG	38	0	38.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	37757	chr21:38423561:-	ONLY_REF_SPLICE	YES	2613	4736	0.01	0.01	GT	1.6895	AG	1.9899	0.1372	1057	0
TMPRSS2--ERG	14	0	14.00	0.00	TMPRSS2^ENSG00000184012.14	4646	chr21:41508087:-	ERG^ENSG00000157554.19	36535	chr21:38445625:-	INCL_NON_REF_SPLICE	YES	2652	734	0.01	0.02	CG	1.5628	AT	1.9899	0.0505	357	0
TMPRSS2--ERG	12	0	12.00	0.00	TMPRSS2^ENSG00000184012.14	4783	chr21:41507950:-	ERG^ENSG00000157554.19	37757	chr21:38423561:-	ONLY_REF_SPLICE	YES	3389	4736	0.00	0.00	GT	1.3996	AG	1.9899	0.0433	1028	0
TMPRSS2--ERG	11	0	11.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	36543	chr21:38445617:-	INCL_NON_REF_SPLICE	YES	2613	1050	0.00	0.01	GT	1.6895	AG	1.9219	0.0397	347	0
TMPRSS2--ERG	4	9	4.00	0.02	TMPRSS2^ENSG00000184012.14	5750	chr21:41506983:-	ERG^ENSG00000157554.19	36539	chr21:38445621:-	ONLY_REF_SPLICE	YES	2549	948	0.01	0.01	GT	1.4295	AG	1.9656	0.0145	820	0
TMPRSS2--ERG	3	9	3.00	0.02	TMPRSS2^ENSG00000184012.14	5035	chr21:41507698:-	ERG^ENSG00000157554.19	36539	chr21:38445621:-	ONLY_REF_SPLICE	NO	2747	948	0.00	0.01	GT	1.7056	AG	1.9656	0.0109	209	0
TMPRSS2--ERG	4	0	4.00	0.00	TMPRSS2^ENSG00000184012.14	3574	chr21:41511863:-	ERG^ENSG00000157554.19	36539	chr21:38445621:-	ONLY_REF_SPLICE	YES	5	948	0.83	0.01	GT	1.9086	AG	1.9656	0.0144	214	0
TMPRSS2--ERG	4	0	4.00	0.00	TMPRSS2^ENSG00000184012.14	4636	chr21:41508097:-	ERG^ENSG00000157554.19	35526	chr21:38449034:-	INCL_NON_REF_SPLICE	YES	2365	361	0.00	0.01	GC	1.1589	CA	1.7232	0.0144	1244	0
TMPRSS2--ERG	1	0	1.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	43911	chr21:38392444:-	ONLY_REF_SPLICE	YES	2613	4030	0.00	0.00	GT	1.6895	AG	1.9086	0.0036	2815	0
TMPRSS2--ERG	1	0	1.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	38909	chr21:38403709:-	ONLY_REF_SPLICE	YES	2613	3190	0.00	0.00	GT	1.6895	AG	1.9899	0.0036	1071	0
TMPRSS2--ERG	1	0	1.00	0.00	TMPRSS2^ENSG00000184012.14	3574	chr21:41511863:-	ERG^ENSG00000157554.19	37757	chr21:38423561:-	ONLY_REF_SPLICE	YES	5	4736	0.33	0.00	GT	1.9086	AG	1.9899	0.0036	995	0
TMPRSS2--ERG	1	0	1.00	0.00	TMPRSS2^ENSG00000184012.14	2144	chr21:41529973:-	ERG^ENSG00000157554.19	36539	chr21:38445621:-	ONLY_REF_SPLICE	YES	0	948	2.00	0.00	GT	1.9656	AG	1.9656	0.0036	1045	0
CORO1C--CRY1	319	9	319.00	8.99	CORO1C^ENSG00000110880.11	7684	chr12:108678272:-	CRY1^ENSG00000008405.12	29518	chr12:107005248:-	ONLY_REF_SPLICE	YES	655	306	0.50	1.07	GT	1.9656	AG	1.8892	1.1842	2540	0
CORO1C--CRY1	1	3	1.00	0.01	CORO1C^ENSG00000110880.11	5334	chr12:108701124:-	CRY1^ENSG00000008405.12	29518	chr12:107005248:-	ONLY_REF_SPLICE	NO	1123	306	0.00	0.02	GT	1.8295	AG	1.8892	0.0036	583	0
KAT6A--TAC4	304	8	304.00	8.00	KAT6A^ENSG00000083168.11	18906	chr8:41955296:-	TAC4^ENSG00000176358.15	43272	chr17:49844157:-	ONLY_REF_SPLICE	YES	312	244	1.00	1.28	GT	1.8295	AG	1.7056	1.1264	2563	0
KAT6A--TAC4	7	0	7.00	0.00	KAT6A^ENSG00000083168.11	12901	chr8:41974704:-	TAC4^ENSG00000176358.15	43272	chr17:49844157:-	ONLY_REF_SPLICE	YES	382	244	0.02	0.03	GT	1.8062	AG	1.7056	0.0253	1035	0
PCDHGB2--PCDHGA10	269	4	33.62	0.50	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA10^ENSG00000253846.2	12051	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	336	274.00	0.81	GT	1.7819	AG	1.3383	0.1232	1890	0
PCDHGB2--PCDHGA11	269	4	33.62	0.50	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA11^ENSG00000253873.6	11222	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	10	274.00	24.91	GT	1.7819	AG	1.3383	0.1232	1018	0
PCDHGB2--PCDHGA12	269	4	33.62	0.50	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA12^ENSG00000253159.3	10305	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	55	274.00	4.89	GT	1.7819	AG	1.3383	0.1232	1413	0
PCDHGB2--PCDHGA8	269	4	33.62	0.50	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA8^ENSG00000253767.3	14069	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	32	274.00	8.30	GT	1.7819	AG	1.3383	0.1232	1419	0
PCDHGB2--PCDHGA9	269	4	33.62	0.50	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA9^ENSG00000261934.2	10157	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	18	274.00	14.42	GT	1.7819	AG	1.3383	0.1232	1493	0
PCDHGB2--PCDHGC3	269	4	33.62	0.50	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC3^ENSG00000240184.7	10438	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	357	274.00	0.77	GT	1.7819	AG	1.3383	0.1232	1210	0
PCDHGB2--PCDHGC4	269	4	33.62	0.50	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC4^ENSG00000242419.5	10382	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	0	274.00	274.00	GT	1.7819	AG	1.3383	0.1232	1585	0
PCDHGB2--PCDHGC5	269	4	33.62	0.50	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC5^ENSG00000240764.4	10438	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	4	274.00	54.80	GT	1.7819	AG	1.3383	0.1232	1206	0
FBXO25--AC240565.1	257	0	257.00	0.00	FBXO25^ENSG00000147364.17	7247	chr8:435707:+	AC240565.1^ENSG00000280136.2	27298	chr17:106864:-	ONLY_REF_SPLICE	YES	1136	63	0.23	4.03	GT	1.7819	AG	1.8892	0.9278	7162	0
FBXO25--AC240565.1	1	0	1.00	0.00	FBXO25^ENSG00000147364.17	4937	chr8:431444:+	AC240565.1^ENSG00000280136.2	27298	chr17:106864:-	ONLY_REF_SPLICE	YES	1054	63	0.00	0.03	GT	1.3383	AG	1.8892	0.0036	5533	0
C1QTNF3--AMACR	242	17	242.00	15.88	C1QTNF3^ENSG00000082196.21	7818	chr5:34020587:-	AMACR^ENSG00000242110.8	14880	chr5:34005899:-	INCL_NON_REF_SPLICE	YES	418	5177	0.62	0.05	GT	1.9086	AG	1.9086	0.931	1362	0
C1QTNF3--AMACR	16	18	16.00	2.12	C1QTNF3^ENSG00000082196.21	8100	chr5:34020305:-	AMACR^ENSG00000242110.8	14880	chr5:34005899:-	INCL_NON_REF_SPLICE	YES	1	5177	17.50	0.01	GT	1.8892	AG	1.9086	0.0655	1300	0
KLRC4--KLRK1	166	4	166.00	3.59	KLRC4^ENSG00000183542.5	3122	chr12:10407636:-	KLRK1^ENSG00000213809.9	8583	chr12:10388875:-	INCL_NON_REF_SPLICE	YES	137	129	1.24	1.32	GT	1.3996	AG	1.9219	0.6123	1207	0
KLRC4--KLRK1	18	5	18.00	1.41	KLRC4^ENSG00000183542.5	3122	chr12:10407636:-	KLRK1^ENSG00000213809.9	6360	chr12:10391891:-	INCL_NON_REF_SPLICE	YES	137	0	0.17	24.00	GT	1.3996	AG	1.6895	0.0701	3430	0
AL353637.2--PRUNE2	159	0	159.00	0.00	AL353637.2^ENSG00000286332.1	1086	chr9:76919700:-	PRUNE2^ENSG00000106772.18	10573	chr9:76854208:-	ONLY_REF_SPLICE	YES	0	1143	160.00	0.14	GT	1.4566	AG	1.7465	0.574	4892	0
AL353637.2--PRUNE2	15	2	15.00	2.00	AL353637.2^ENSG00000286332.1	2383	chr9:76918370:-	PRUNE2^ENSG00000106772.18	10573	chr9:76854208:-	INCL_NON_REF_SPLICE	YES	0	1143	18.00	0.02	GT	1.9329	AG	1.7465	0.0614	4777	0
TVP23C--CDRT4	157	2	157.00	1.95	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	INCL_NON_REF_SPLICE	YES	187	32	0.85	4.85	GT	1.9329	AG	1.9899	0.5738	1215	0
TVP23C--CDRT4	63	0	63.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	763	32	0.08	1.94	GT	1.8323	AG	1.9899	0.2274	2126	0
TVP23C--CDRT4	31	0	31.00	0.00	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	INCL_NON_REF_SPLICE	YES	187	121	0.17	0.26	GT	1.9329	AG	1.6402	0.1119	137	0
TVP23C--CDRT4	31	0	31.00	0.00	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	336	32	0.09	0.97	GT	1.9086	AG	1.9899	0.1119	1774	0
TVP23C--CDRT4	14	0	14.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	763	121	0.02	0.12	GT	1.8323	AG	1.6402	0.0505	1363	0
TVP23C--CDRT4	11	0	11.00	0.00	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	30	32	0.39	0.36	GT	1.8892	AG	1.9899	0.0397	1949	0
TVP23C--CDRT4	4	0	4.00	0.00	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	336	121	0.01	0.04	GT	1.9086	AG	1.6402	0.0144	697	0
TVP23C--CDRT4	3	3	3.00	1.05	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	21051	chr17:15453085:-	INCL_NON_REF_SPLICE	YES	187	0	0.04	7.00	GT	1.9329	AG	1.8892	0.0146	1153	0
TVP23C--CDRT4	2	0	2.00	0.00	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	30	121	0.10	0.02	GT	1.8892	AG	1.6402	0.0072	873	0
DDX42--AC005670.3	143	3	143.00	3.00	DDX42^ENSG00000198231.13	9393	chr17:63805175:+	AC005670.3^ENSG00000262879.6	55174	chr17:46984069:-	ONLY_REF_SPLICE	YES	540	0	0.27	147.00	GT	1.9899	AG	1.8892	0.5271	4360	0
TLK2--FAM157A	109	0	109.00	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	FAM157A^ENSG00000236438.7	45187	chr3:198180755:+	ONLY_REF_SPLICE	YES	680	81	0.16	1.34	GT	1.8892	AG	1.8892	0.3935	2733	0
AC138409.2--NAIP	108	0	108.00	0.00	AC138409.2^ENSG00000215158.9	11022	chr5:34175822:-	NAIP^ENSG00000249437.8	25774	chr5:71003857:-	ONLY_REF_SPLICE	YES	381	414	0.29	0.26	GT	1.9329	AG	1.8295	0.3899	1426	0
AC138409.2--NAIP	33	1	33.00	1.00	AC138409.2^ENSG00000215158.9	11399	chr5:34175445:-	NAIP^ENSG00000249437.8	25774	chr5:71003857:-	ONLY_REF_SPLICE	YES	78	414	0.44	0.08	GT	1.9086	AG	1.8295	0.1227	1066	0
AC138409.2--NAIP	9	0	9.00	0.00	AC138409.2^ENSG00000215158.9	11022	chr5:34175822:-	NAIP^ENSG00000249437.8	32625	chr5:70985886:-	ONLY_REF_SPLICE	YES	381	1191	0.03	0.01	GT	1.9329	AG	1.8323	0.0325	1476	0
AC138409.2--NAIP	7	0	7.00	0.00	AC138409.2^ENSG00000215158.9	11399	chr5:34175445:-	NAIP^ENSG00000249437.8	30637	chr5:70987874:-	ONLY_REF_SPLICE	YES	78	915	0.10	0.01	GT	1.9086	AG	1.6895	0.0253	1599	0
AC138409.2--NAIP	5	0	5.00	0.00	AC138409.2^ENSG00000215158.9	11022	chr5:34175822:-	NAIP^ENSG00000249437.8	30637	chr5:70987874:-	ONLY_REF_SPLICE	YES	381	915	0.02	0.01	GT	1.9329	AG	1.6895	0.0181	1976	0
AC138409.2--NAIP	4	0	4.00	0.00	AC138409.2^ENSG00000215158.9	11022	chr5:34175822:-	NAIP^ENSG00000249437.8	31709	chr5:70986802:-	ONLY_REF_SPLICE	YES	381	811	0.01	0.01	GT	1.9329	AG	1.6729	0.0144	1434	0
AC138409.2--NAIP	1	0	1.00	0.00	AC138409.2^ENSG00000215158.9	11399	chr5:34175445:-	NAIP^ENSG00000249437.8	32625	chr5:70985886:-	ONLY_REF_SPLICE	YES	78	1191	0.03	0.00	GT	1.9086	AG	1.8323	0.0036	1132	0
CRISPLD2--TRANK1	74	2	74.00	2.00	CRISPLD2^ENSG00000103196.12	17041	chr16:84873963:+	TRANK1^ENSG00000168016.15	34211	chr3:36899259:-	ONLY_REF_SPLICE	YES	303	283	0.25	0.27	GT	1.7465	AG	1.9899	0.2744	3364	0
STX16--NPEPL1	46	0	46.00	0.00	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1221	86	0.04	0.54	GT	1.7968	AG	1.8256	0.1661	1940	0
AGPAT5--MAGI3	42	1	42.00	0.89	AGPAT5^ENSG00000155189.12	1246	chr8:6708887:+	MAGI3^ENSG00000081026.19	23191	chr1:113549515:+	ONLY_REF_SPLICE	YES	281	645	0.16	0.07	GT	1.9086	AG	1.7968	0.1548	2945	0
AGPAT5--MAGI3	5	1	5.00	0.11	AGPAT5^ENSG00000155189.12	2971	chr8:6724939:+	MAGI3^ENSG00000081026.19	23191	chr1:113549515:+	ONLY_REF_SPLICE	YES	193	645	0.04	0.01	GT	1.7968	AG	1.7968	0.0185	2884	0
CEP112--CPQ	21	0	21.00	0.00	CEP112^ENSG00000154240.17	35101	chr17:65743068:-	CPQ^ENSG00000104324.16	55847	chr8:97029403:+	ONLY_REF_SPLICE	YES	38	247	0.56	0.09	GT	1.7465	AG	1.9329	0.0758	2548	0
MAN1A2--LINC00535	19	2	19.00	0.72	MAN1A2^ENSG00000198162.12	2037	chr1:117368485:+	LINC00535^ENSG00000246662.6	33408	chr8:93531305:-	ONLY_REF_SPLICE	YES	415	0	0.05	22.00	GT	1.8295	AG	1.5058	0.0712	1184	0
MAN1A2--LINC00535	18	2	18.00	0.68	MAN1A2^ENSG00000198162.12	2037	chr1:117368485:+	LINC00535^ENSG00000246662.6	38356	chr8:93346906:-	ONLY_REF_SPLICE	YES	415	1	0.05	10.50	GT	1.8295	AG	1.4295	0.0675	121	0
MAN1A2--LINC00535	10	2	10.00	0.38	MAN1A2^ENSG00000198162.12	2037	chr1:117368485:+	LINC00535^ENSG00000246662.6	37297	chr8:93362578:-	ONLY_REF_SPLICE	YES	415	0	0.03	13.00	GT	1.8295	AG	1.9086	0.0375	1099	0
MAN1A2--LINC00535	5	2	5.00	0.19	MAN1A2^ENSG00000198162.12	2083	chr1:117368531:+	LINC00535^ENSG00000246662.6	33408	chr8:93531305:-	INCL_NON_REF_SPLICE	YES	370	0	0.02	8.00	GT	1.9086	AG	1.5058	0.0188	1198	0
MAN1A2--LINC00535	2	1	2.00	0.04	MAN1A2^ENSG00000198162.12	2037	chr1:117368485:+	LINC00535^ENSG00000246662.6	39796	chr8:93340257:-	ONLY_REF_SPLICE	YES	415	0	0.01	4.00	GT	1.8295	AG	1.3383	0.0073	1136	0
MAN1A2--LINC00535	1	0	1.00	0.00	MAN1A2^ENSG00000198162.12	2037	chr1:117368485:+	LINC00535^ENSG00000246662.6	41988	chr8:93292686:-	ONLY_REF_SPLICE	YES	415	0	0.00	2.00	GT	1.8295	AG	1.5656	0.0036	2399	0
RNF43--IFNGR2	18	0	18.00	0.00	RNF43^ENSG00000108375.13	3270	chr17:58415326:-	IFNGR2^ENSG00000159128.15	27302	chr21:33478798:+	ONLY_REF_SPLICE	YES	512	6	0.04	2.71	GC	1.7465	AG	1.6729	0.065	1322	0
AL512590.2--CCDC180	15	0	15.00	0.00	AL512590.2^ENSG00000254633.2	10469	chr9:97294991:+	CCDC180^ENSG00000197816.16	14676	chr9:97307736:+	ONLY_REF_SPLICE	YES	0	0	16.00	16.00	GT	1.9219	AG	1.8892	0.0542	1040	0
TMEM50B--TSPOAP1-AS1	13	0	13.00	0.00	TMEM50B^ENSG00000142188.17	1137	chr21:33479838:-	TSPOAP1-AS1^ENSG00000265148.6	31741	chr17:58394906:+	ONLY_REF_SPLICE	YES	285	9	0.05	1.40	GT	1.7465	AG	1.8256	0.0469	62	1
TMEM50B--TSPOAP1-AS1	9	0	9.00	0.00	TMEM50B^ENSG00000142188.17	1137	chr21:33479838:-	TSPOAP1-AS1^ENSG00000265148.6	32846	chr17:58415466:+	ONLY_REF_SPLICE	YES	285	1231	0.03	0.01	GT	1.7465	AG	1.8295	0.0325	1101	0
CCDC30--CPNE7	8	0	8.00	0.00	CCDC30^ENSG00000186409.18	18641	chr1:42521256:+	CPNE7^ENSG00000178773.15	74678	chr16:89595367:+	ONLY_REF_SPLICE	YES	82	2074	0.11	0.00	GT	1.8892	AG	1.8256	0.0289	2027	0