#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	11036	305	11036.00	299.97	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	1732	2542	6.54	4.46	GT	1.8892	AG	1.7819	38.3508	627	0
FGFR3--TACC3	138	308	138.00	6.53	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	26236	chr4:1738348:+	ONLY_REF_SPLICE	YES	1732	1653	0.26	0.27	GT	1.8892	AG	1.9086	0.489	310	0
FGFR3--TACC3	8	308	8.00	0.38	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	26224	chr4:1738336:+	INCL_NON_REF_SPLICE	YES	1732	1653	0.18	0.19	GT	1.8892	AG	1.8323	0.0284	299	0
FGFR3--TACC3	7	308	7.00	0.33	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	22063	chr4:1730798:+	INCL_NON_REF_SPLICE	NO	1732	1501	0.18	0.21	GT	1.8892	AG	1.6895	0.0248	1411	0
FGFR3--TACC3	5	305	5.00	0.14	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27358	chr4:1739470:+	INCL_NON_REF_SPLICE	YES	1732	1767	0.18	0.18	GT	1.8892	AG	1.5850	0.0174	766	0
FGFR3--TACC3	4	305	4.00	0.11	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27587	chr4:1739699:+	INCL_NON_REF_SPLICE	YES	1732	2497	0.18	0.12	GT	1.8892	AG	1.7819	0.0139	630	0
FGFR3--TACC3	4	305	4.00	0.11	FGFR3^ENSG00000068078.20	9880	chr4:1806936:+	TACC3^ENSG00000013810.20	27593	chr4:1739705:+	INCL_NON_REF_SPLICE	YES	1524	2666	0.20	0.12	GA	1.8892	TA	1.5219	0.0139	623	0
FGFR3--TACC3	4	294	4.00	0.10	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27596	chr4:1739708:+	INCL_NON_REF_SPLICE	NO	1732	2808	0.17	0.11	GT	1.8892	AG	1.5058	0.0138	622	0
FGFR3--TACC3	3	295	3.00	0.08	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27595	chr4:1739707:+	INCL_NON_REF_SPLICE	NO	1732	2742	0.17	0.11	GT	1.8892	AA	1.5058	0.0104	623	0
FGFR3--TACC3	3	294	3.00	0.08	FGFR3^ENSG00000068078.20	9882	chr4:1806938:+	TACC3^ENSG00000013810.20	27596	chr4:1739708:+	INCL_NON_REF_SPLICE	YES	1522	2808	0.20	0.11	GT	1.8892	AG	1.5058	0.0104	620	0
FGFR3--TACC3	8	237	8.00	0.17	FGFR3^ENSG00000068078.20	9872	chr4:1806928:+	TACC3^ENSG00000013810.20	27587	chr4:1739699:+	INCL_NON_REF_SPLICE	YES	1913	2497	0.13	0.10	AC	1.8892	AG	1.7819	0.0277	633	0
FGFR3--TACC3	1	32	1.00	0.00	FGFR3^ENSG00000068078.20	9627	chr4:1806683:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	3299	2542	0.01	0.01	GT	1.7968	AG	1.7819	0.0034	556	0
FGFR3--TACC3	3	0	3.00	0.00	FGFR3^ENSG00000068078.20	9104	chr4:1806160:+	TACC3^ENSG00000013810.20	27847	chr4:1739959:+	INCL_NON_REF_SPLICE	YES	4550	3376	0.00	0.00	GA	1.7819	AG	1.8323	0.0101	331	0
FGFR3--TACC3	3	0	3.00	0.00	FGFR3^ENSG00000068078.20	9259	chr4:1806315:+	TACC3^ENSG00000013810.20	31148	chr4:1744577:+	INCL_NON_REF_SPLICE	YES	4399	4921	0.00	0.00	CC	1.8892	GG	1.8256	0.0101	322	0
FGFR3--TACC3	1	0	1.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	31089	chr4:1744518:+	ONLY_REF_SPLICE	YES	1732	3938	0.00	0.00	GT	1.8892	AG	1.8892	0.0034	106	0
MRPS16--CFAP70	408	11	408.00	5.67	MRPS16^ENSG00000182180.14	2770	chr10:73250924:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	INCL_NON_REF_SPLICE	YES	1587	141	0.26	2.96	GC	1.7819	AG	1.9329	1.3995	2054	0
MRPS16--CFAP70	188	23	188.00	9.94	MRPS16^ENSG00000182180.14	2879	chr10:73250815:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	INCL_NON_REF_SPLICE	YES	550	141	0.38	1.49	GT	1.7056	AG	1.9329	0.6696	1962	0
MRPS16--CFAP70	126	21	126.00	5.45	MRPS16^ENSG00000182180.14	2856	chr10:73250838:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	INCL_NON_REF_SPLICE	YES	722	141	0.20	1.04	GT	1.9086	AG	1.9329	0.4447	1981	0
MRPS16--CFAP70	60	4	60.00	0.29	MRPS16^ENSG00000182180.14	1931	chr10:73251763:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	ONLY_REF_SPLICE	YES	1622	141	0.04	0.46	GT	1.9329	AG	1.9329	0.204	2803	0
MRPS16--CFAP70	29	23	29.00	1.53	MRPS16^ENSG00000182180.14	2885	chr10:73250809:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	INCL_NON_REF_SPLICE	YES	520	141	0.10	0.37	GT	1.7056	AG	1.9329	0.1033	1957	0
MRPS16--CFAP70	7	12	7.00	0.12	MRPS16^ENSG00000182180.14	2784	chr10:73250910:-	CFAP70^ENSG00000156042.18	36162	chr10:73256416:-	INCL_NON_REF_SPLICE	YES	1500	141	0.01	0.14	GT	1.9656	AG	1.9329	0.0241	2042	0
MRPS16--CFAP70	1	4	1.00	0.00	MRPS16^ENSG00000182180.14	1931	chr10:73251763:-	CFAP70^ENSG00000156042.18	37210	chr10:73254055:-	ONLY_REF_SPLICE	YES	1622	407	0.00	0.01	GT	1.9329	AG	1.7465	0.0034	3349	0
PCDHGB2--PCDHGA10	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA10^ENSG00000253846.2	12051	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	96	155.00	1.60	GT	1.7819	AG	1.3383	0.0651	1890	0
PCDHGB2--PCDHGA11	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA11^ENSG00000253873.6	11222	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	21	155.00	7.05	GT	1.7819	AG	1.3383	0.0651	1018	0
PCDHGB2--PCDHGA12	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA12^ENSG00000253159.3	10305	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	90	155.00	1.70	GT	1.7819	AG	1.3383	0.0651	1413	0
PCDHGB2--PCDHGA8	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA8^ENSG00000253767.3	14069	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	35	155.00	4.31	GT	1.7819	AG	1.3383	0.0651	1419	0
PCDHGB2--PCDHGA9	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA9^ENSG00000261934.2	10157	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	167	155.00	0.92	GT	1.7819	AG	1.3383	0.0651	1493	0
PCDHGB2--PCDHGC3	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC3^ENSG00000240184.7	10438	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	1186	155.00	0.13	GT	1.7819	AG	1.3383	0.0651	1210	0
PCDHGB2--PCDHGC4	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC4^ENSG00000242419.5	10382	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	0	155.00	155.00	GT	1.7819	AG	1.3383	0.0651	1585	0
PCDHGB2--PCDHGC5	154	0	19.25	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC5^ENSG00000240764.4	10438	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	17	155.00	8.61	GT	1.7819	AG	1.3383	0.0651	1206	0
TVP23C--CDRT4	125	2	125.00	1.09	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	678	21	0.19	5.82	GT	1.8323	AG	1.9899	0.4266	2126	0
TVP23C--CDRT4	86	8	86.00	6.48	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	INCL_NON_REF_SPLICE	YES	91	21	1.03	4.32	GT	1.9329	AG	1.9899	0.3128	1215	0
TVP23C--CDRT4	17	2	17.00	0.32	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	INCL_NON_REF_SPLICE	YES	91	83	0.22	0.24	GT	1.9329	AG	1.6402	0.0586	137	0
TVP23C--CDRT4	16	0	16.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	678	83	0.03	0.20	GT	1.8323	AG	1.6402	0.0541	1363	0
TVP23C--CDRT4	12	2	12.00	0.10	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	44	21	0.33	0.68	GT	1.8892	AG	1.9899	0.0409	1949	0
TVP23C--CDRT4	1	2	1.00	0.01	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	21051	chr17:15453085:-	ONLY_REF_SPLICE	NO	678	0	0.01	4.00	GT	1.8323	AG	1.8892	0.0034	1044	0
PCDHA10--PCDHAC1	109	6	54.50	3.00	PCDHA10^ENSG00000250120.8	3554	chr5:140858436:+	PCDHAC1^ENSG00000248383.5	21506	chr5:140978949:+	INCL_NON_REF_SPLICE	YES	25	29	4.46	3.87	GT	1.9329	AG	1.3996	0.1945	1105	0
PCDHA10--PCDHAC2	109	6	54.50	3.00	PCDHA10^ENSG00000250120.8	3554	chr5:140858436:+	PCDHAC2^ENSG00000243232.6	20370	chr5:140978949:+	INCL_NON_REF_SPLICE	YES	25	64	4.46	1.78	GT	1.9329	AG	1.3996	0.1945	1235	0
STX16--NPEPL1	98	7	98.00	7.00	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1228	64	0.09	1.63	GT	1.7968	AG	1.8256	0.3552	1940	0
TMED7--TICAM2	91	12	91.00	11.39	TMED7^ENSG00000134970.14	4947	chr5:115616318:-	TICAM2^ENSG00000243414.6	13048	chr5:115581315:-	INCL_NON_REF_SPLICE	YES	1381	144	0.08	0.72	GT	1.9329	AG	1.6729	0.3464	331	0
TMED7--TICAM2	16	4	16.00	0.55	TMED7^ENSG00000134970.14	4947	chr5:115616318:-	TICAM2^ENSG00000243414.6	13166	chr5:115581197:-	INCL_NON_REF_SPLICE	YES	1381	380	0.02	0.06	GT	1.9329	AG	1.9656	0.056	213	0
TMED7--TICAM2	8	1	8.00	0.06	TMED7^ENSG00000134970.14	3819	chr5:115620435:-	TICAM2^ENSG00000243414.6	13048	chr5:115581315:-	ONLY_REF_SPLICE	YES	1455	144	0.01	0.07	GT	1.9656	AG	1.6729	0.0273	1185	0
TLK2--AC240565.1	87	0	87.00	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	910	54	0.10	1.60	GT	1.8892	AG	1.8892	0.2943	1734	0
AC092807.3--DDAH1	75	7	75.00	6.65	AC092807.3^ENSG00000282057.1	5553	chr1:85496166:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	1	306	41.50	0.27	GT	1.5628	AG	1.8062	0.2762	3011	0
AC092807.3--DDAH1	25	0	25.00	0.00	AC092807.3^ENSG00000282057.1	1267	chr1:85577984:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	2	306	8.67	0.08	GT	1.8062	AG	1.8062	0.0846	2484	0
AC092807.3--DDAH1	4	7	4.00	0.35	AC092807.3^ENSG00000282057.1	9402	chr1:85488291:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	306	12.00	0.04	GT	1.8892	AG	1.8062	0.0147	2892	0
AC092807.3--DDAH1	1	0	1.00	0.00	AC092807.3^ENSG00000282057.1	2469	chr1:85576657:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	1	306	1.00	0.01	GT	1.8892	AG	1.8062	0.0034	2786	0
AC092807.3--DDAH1	1	0	1.00	0.00	AC092807.3^ENSG00000282057.1	1267	chr1:85577984:-	DDAH1^ENSG00000153904.21	17312	chr1:85351579:-	ONLY_REF_SPLICE	YES	2	278	0.67	0.01	GT	1.8062	AG	1.8062	0.0034	3584	0
AC015911.9--SLFN12L	59	14	59.00	13.39	AC015911.9^ENSG00000286030.2	1691	chr17:35522279:-	SLFN12L^ENSG00000205045.11	6142	chr17:35480195:-	ONLY_REF_SPLICE	YES	0	112	74.00	0.65	GT	1.9329	AG	1.8892	0.2449	533	0
AC015911.9--SLFN12L	28	2	28.00	0.55	AC015911.9^ENSG00000286030.2	1691	chr17:35522279:-	SLFN12L^ENSG00000286065.2	8152	chr17:35478185:-	ONLY_REF_SPLICE	YES	0	174	31.00	0.18	GT	1.9329	AG	1.9329	0.0966	1380	0
AC015911.9--SLFN12L	6	1	6.00	0.06	AC015911.9^ENSG00000286030.2	1691	chr17:35522279:-	SLFN12L^ENSG00000205045.11	9263	chr17:35475485:-	ONLY_REF_SPLICE	YES	0	215	8.00	0.04	GT	1.9329	AG	1.7968	0.0205	508	0
PDXDC1--NPIPB5	54	18	54.00	18.00	PDXDC1^ENSG00000179889.19	18993	chr16:15030056:+	NPIPB5^ENSG00000243716.10	46643	chr16:22513522:+	ONLY_REF_SPLICE	YES	1571	390	0.05	0.19	GT	1.9329	AG	1.9329	0.2436	391	0
AGAP12P--FRMPD2	43	2	43.00	2.00	AGAP12P^ENSG00000265018.6	3807	chr10:48025897:-	FRMPD2^ENSG00000170324.21	35365	chr10:48181008:-	ONLY_REF_SPLICE	YES	704	2	0.07	15.33	GT	1.7465	AG	1.5656	0.1523	1060	0
AP001347.1--ANKRD20A11P	18	1	18.00	0.30	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	9303	chr21:13979932:-	INCL_NON_REF_SPLICE	YES	33	12	0.59	1.54	GT	1.8323	AG	1.5628	0.0619	3573	0
AP001347.1--ANKRD20A11P	14	1	14.00	0.23	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	13948	chr21:13970110:-	ONLY_REF_SPLICE	YES	33	24	0.47	0.64	GT	1.8323	AG	1.8892	0.0482	2637	0
AP001347.1--ANKRD20A11P	10	1	10.00	0.17	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	19375	chr21:13954150:-	ONLY_REF_SPLICE	YES	33	33	0.35	0.35	GT	1.8323	AG	1.9656	0.0344	2888	0
AP001347.1--ANKRD20A11P	7	1	7.00	0.12	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	9351	chr21:13979884:-	INCL_NON_REF_SPLICE	YES	33	26	0.26	0.33	GT	1.8323	AG	1.5656	0.0241	3536	0
AP001347.1--ANKRD20A11P	4	1	4.00	0.07	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	19378	chr21:13954147:-	INCL_NON_REF_SPLICE	YES	33	35	0.18	0.17	GT	1.8323	AG	1.9656	0.0137	2887	0
AP001347.1--ANKRD20A11P	4	1	4.00	0.07	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	9298	chr21:13979937:-	INCL_NON_REF_SPLICE	YES	33	11	0.18	0.50	GT	1.8323	AG	1.7465	0.0137	3577	0
AP001347.1--ANKRD20A11P	3	1	3.00	0.05	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	18305	chr21:13958185:-	ONLY_REF_SPLICE	YES	33	27	0.15	0.18	GT	1.8323	AG	1.8062	0.0103	3488	0
AP001347.1--ANKRD20A11P	2	0	2.00	0.00	AP001347.1^ENSG00000224905.7	1179	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	20460	chr21:13951260:-	ONLY_REF_SPLICE	YES	33	79	0.09	0.04	GT	1.8323	AG	1.8323	0.0068	2609	0
KLRC4--KLRK1	15	3	15.00	2.50	KLRC4^ENSG00000183542.5	3122	chr12:10407636:-	KLRK1^ENSG00000213809.9	8583	chr12:10388875:-	INCL_NON_REF_SPLICE	YES	16	43	1.12	0.43	GT	1.3996	AG	1.9219	0.0592	1207	0
KLRC4--KLRK1	3	3	3.00	0.50	KLRC4^ENSG00000183542.5	3122	chr12:10407636:-	KLRK1^ENSG00000213809.9	6360	chr12:10391891:-	INCL_NON_REF_SPLICE	YES	16	0	0.41	7.00	GT	1.3996	AG	1.6895	0.0118	3430	0
SOGA3--KIAA0408	14	1	14.00	1.00	SOGA3^ENSG00000214338.10	11088	chr6:127473080:-	KIAA0408^ENSG00000189367.15	15731	chr6:127454101:-	INCL_NON_REF_SPLICE	YES	0	7	16.00	2.00	GT	1.6895	AG	1.7465	0.0508	176	0
ANK3--AC036101.1	6	0	6.00	0.00	ANK3^ENSG00000151150.22	23110	chr10:60196145:-	AC036101.1^ENSG00000226296.1	78045	chr10:53291594:-	ONLY_REF_SPLICE	YES	310	0	0.02	7.00	GT	1.5656	AG	1.8323	0.0203	9056	0