File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/bclconvert/L004/Reports/Quality_Metrics.csv
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- 9.8 KB
- Workflow Run
- dev_rna_exp09_10-3b7a596a
- Published
- Jun 04, 2026 12:52 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 4 | 659_b6o-T1-TRNA-1_B23MHV2LT4_1 | TAGCGAGGCT | TTGCTCACGG | 1 | 16165305 | 10940086 | 531973708 | 32.91 | 0.68 |
| 4 | 659_b6o-T1-TRNA-1_B23MHV2LT4_1 | TAGCGAGGCT | TTGCTCACGG | 2 | 16165305 | 10047176 | 519492719 | 32.14 | 0.62 |
| 4 | 659_cAa-T1-TRNA-1_B23MHV2LT4_1 | CCAACTGTAT | GCGCTAGAGA | 1 | 12585397 | 10444553 | 459074069 | 36.48 | 0.83 |
| 4 | 659_cAa-T1-TRNA-1_B23MHV2LT4_1 | CCAACTGTAT | GCGCTAGAGA | 2 | 12585397 | 9167998 | 436187527 | 34.66 | 0.73 |
| 4 | 659_Kh-T1-TRNA-1_B23MHV2LT4_1 | GAGTAGTGAC | GCGATGCCAA | 1 | 128403001 | 120409580 | 4971425336 | 38.72 | 0.94 |
| 4 | 659_Kh-T1-TRNA-1_B23MHV2LT4_1 | GAGTAGTGAC | GCGATGCCAA | 2 | 128403001 | 117607344 | 4913957721 | 38.27 | 0.92 |
| 4 | 659_c95-T1-TRNA-1_B23MHV2LT4_1 | CCAGTATTCT | ACGAAGCGAT | 1 | 16715542054 | 15839265002 | 650291997185 | 38.90 | 0.95 |
| 4 | 659_c95-T1-TRNA-1_B23MHV2LT4_1 | CCAGTATTCT | ACGAAGCGAT | 2 | 16715542054 | 15735369470 | 648190912346 | 38.78 | 0.94 |
| 4 | 659_ciJ-T1-TRNA-1_B23MHV2LT4_1 | ATCATACCGC | ATGTCGTACT | 1 | 14814026687 | 14011159019 | 575541700139 | 38.85 | 0.95 |
| 4 | 659_ciJ-T1-TRNA-1_B23MHV2LT4_1 | ATCATACCGC | ATGTCGTACT | 2 | 14814026687 | 13872009914 | 572760255587 | 38.66 | 0.94 |
| 4 | 659_bhK-T1-TRNA-1_B23MHV2LT4_1 | ATTCGCACTA | TCTGTATGGT | 1 | 18779044332 | 17710153605 | 728291864610 | 38.78 | 0.94 |
| 4 | 659_bhK-T1-TRNA-1_B23MHV2LT4_1 | ATTCGCACTA | TCTGTATGGT | 2 | 18779044332 | 17619305149 | 726939369979 | 38.71 | 0.94 |
| 4 | 659_Lx-T1-TRNA-1_B23MHV2LT4_1 | CTCTTCAGCA | TTGTCTCTAC | 1 | 10091851403 | 9239073390 | 384797855640 | 38.13 | 0.92 |
| 4 | 659_Lx-T1-TRNA-1_B23MHV2LT4_1 | CTCTTCAGCA | TTGTCTCTAC | 2 | 10091851403 | 9428079544 | 389833682086 | 38.63 | 0.93 |
| 4 | 659_bUW-T1-TRNA-1_B23MHV2LT4_1 | CTGTATGCCA | TTCCGGCTGT | 1 | 28398999142 | 26789900649 | 1101581668533 | 38.79 | 0.94 |
| 4 | 659_bUW-T1-TRNA-1_B23MHV2LT4_1 | CTGTATGCCA | TTCCGGCTGT | 2 | 28398999142 | 26692874198 | 1100404438745 | 38.75 | 0.94 |
| 4 | 659_mK-T1-TRNA-2_B23MHV2LT4_1 | TCTGACTATG | TAACCAGATC | 1 | 10604452915 | 9707307385 | 404294668372 | 38.12 | 0.92 |
| 4 | 659_mK-T1-TRNA-2_B23MHV2LT4_1 | TCTGACTATG | TAACCAGATC | 2 | 10604452915 | 9873493050 | 408905996955 | 38.56 | 0.93 |
| 4 | 659_dwi-T1-TRNA-1_B23MHV2LT4_1 | TGTGACGTAT | GCAGCGTTAG | 1 | 20330489 | 16615497 | 736034973 | 36.20 | 0.82 |
| 4 | 659_dwi-T1-TRNA-1_B23MHV2LT4_1 | TGTGACGTAT | GCAGCGTTAG | 2 | 20330489 | 14895180 | 706062366 | 34.73 | 0.73 |
| 4 | NTC_0001_0001_B23MHV2LT4_1 | AGAAGATTGG | AGAAGGTACT | 1 | 6631467 | 4153230 | 211023024 | 31.82 | 0.63 |
| 4 | NTC_0001_0001_B23MHV2LT4_1 | AGAAGATTGG | AGAAGGTACT | 2 | 6631467 | 4785537 | 229027464 | 34.54 | 0.72 |
| 4 | 659_d01-T1-TRNA-1_B23MHV2LT4_1 | ATCCAGCATG | AGAGCTCTAC | 1 | 12865601056 | 11974812459 | 495153404760 | 38.49 | 0.93 |
| 4 | 659_d01-T1-TRNA-1_B23MHV2LT4_1 | ATCCAGCATG | AGAGCTCTAC | 2 | 12865601056 | 12007612800 | 496656128772 | 38.60 | 0.93 |
| 4 | 659_bNS-T1-TRNA-1_B23MHV2LT4_1 | GCGCCATATA | GAACCTCCTA | 1 | 14643181361 | 13790608188 | 567406601655 | 38.75 | 0.94 |
| 4 | 659_bNS-T1-TRNA-1_B23MHV2LT4_1 | GCGCCATATA | GAACCTCCTA | 2 | 14643181361 | 13776765436 | 567655814128 | 38.77 | 0.94 |
| 4 | 659_bR4-T1-TRNA-1_B23MHV2LT4_1 | CACTCGCATA | GAACGCGACA | 1 | 10874302448 | 10224282888 | 420986401809 | 38.71 | 0.94 |
| 4 | 659_bR4-T1-TRNA-1_B23MHV2LT4_1 | CACTCGCATA | GAACGCGACA | 2 | 10874302448 | 10196356578 | 420790904982 | 38.70 | 0.94 |
| 4 | 659_buD-T1-TRNA-1_B23MHV2LT4_1 | AAGGTCAATG | GCATTATAGG | 1 | 15079188878 | 14123240784 | 582514130958 | 38.63 | 0.94 |
| 4 | 659_buD-T1-TRNA-1_B23MHV2LT4_1 | AAGGTCAATG | GCATTATAGG | 2 | 15079188878 | 14157881659 | 583958914417 | 38.73 | 0.94 |
| 4 | 659_cYf-T1-TRNA-1_B23MHV2LT4_1 | GTGACGCACA | CGTTGTTGCG | 1 | 16427998643 | 15280307490 | 632114698710 | 38.48 | 0.93 |
| 4 | 659_cYf-T1-TRNA-1_B23MHV2LT4_1 | GTGACGCACA | CGTTGTTGCG | 2 | 16427998643 | 15241333537 | 632023664266 | 38.47 | 0.93 |
| 4 | 659_R1-T1-TRNA-1_B23MHV2LT4_1 | TGTCAGGCTT | GATTCCTTAC | 1 | 18543706 | 12789418 | 615588376 | 33.20 | 0.69 |
| 4 | 659_R1-T1-TRNA-1_B23MHV2LT4_1 | TGTCAGGCTT | GATTCCTTAC | 2 | 18543706 | 11338346 | 592202462 | 31.94 | 0.61 |
| 4 | 659_eGK-T1-TRNA-1_B23MHV2LT4_1 | CACGTGATGG | TACAACGTGT | 1 | 15820977888 | 14983485374 | 615238381391 | 38.89 | 0.95 |
| 4 | 659_eGK-T1-TRNA-1_B23MHV2LT4_1 | CACGTGATGG | TACAACGTGT | 2 | 15820977888 | 14934397321 | 614432358223 | 38.84 | 0.94 |
| 4 | 659_On-T1-TRNA-2_B23MHV2LT4_1 | CCATCACGTG | TCTCCTGGTT | 1 | 12355232079 | 11651480772 | 479137148604 | 38.78 | 0.94 |
| 4 | 659_On-T1-TRNA-2_B23MHV2LT4_1 | CCATCACGTG | TCTCCTGGTT | 2 | 12355232079 | 11632838585 | 479142852554 | 38.78 | 0.94 |
| 4 | 659_d0V-T1-TRNA-1_B23MHV2LT4_1 | ACCAGGAATT | AGCATGGCAT | 1 | 13780109 | 9307441 | 452712334 | 32.85 | 0.68 |
| 4 | 659_d0V-T1-TRNA-1_B23MHV2LT4_1 | ACCAGGAATT | AGCATGGCAT | 2 | 13780109 | 9811147 | 473886910 | 34.39 | 0.71 |
| 4 | 659_8h-T1-TRNA-1_B23MHV2LT4_1 | TAAGGCTCAC | GACGTTACTT | 1 | 10499030 | 7562859 | 356442486 | 33.95 | 0.72 |
| 4 | 659_8h-T1-TRNA-1_B23MHV2LT4_1 | TAAGGCTCAC | GACGTTACTT | 2 | 10499030 | 6748275 | 344104659 | 32.77 | 0.64 |
| 4 | 659_Dl-T1-TRNA-1_B23MHV2LT4_1 | TGGCACTGAT | GCCATAGAAT | 1 | 7724097111 | 7205329684 | 297894023761 | 38.57 | 0.93 |
| 4 | 659_Dl-T1-TRNA-1_B23MHV2LT4_1 | TGGCACTGAT | GCCATAGAAT | 2 | 7724097111 | 7219961463 | 298359142854 | 38.63 | 0.93 |
| 4 | 659_eKx-T1-TRNA-1_B23MHV2LT4_1 | CATATGGTGC | ACAGATCTCA | 1 | 14884674 | 11480232 | 523377246 | 35.16 | 0.77 |
| 4 | 659_eKx-T1-TRNA-1_B23MHV2LT4_1 | CATATGGTGC | ACAGATCTCA | 2 | 14884674 | 10119198 | 502075791 | 33.73 | 0.68 |
| 4 | 659_dES-T1-TRNA-1_B23MHV2LT4_1 | GCACTACCAG | GAAGACTTAG | 1 | 11670007669 | 10858454280 | 449197508862 | 38.49 | 0.93 |
| 4 | 659_dES-T1-TRNA-1_B23MHV2LT4_1 | GCACTACCAG | GAAGACTTAG | 2 | 11670007669 | 10941675083 | 451586217782 | 38.70 | 0.94 |
| 4 | 659_ri-T1-TRNA-1_B23MHV2LT4_1 | GCATAAGATC | GAGAACTGGA | 1 | 6243504210 | 5658119493 | 236915070360 | 37.95 | 0.91 |
| 4 | 659_ri-T1-TRNA-1_B23MHV2LT4_1 | GCATAAGATC | GAGAACTGGA | 2 | 6243504210 | 5798920928 | 240468844529 | 38.52 | 0.93 |
| 4 | 659_1q-T1-TRNA-1_B23MHV2LT4_1 | AAGGTGTACT | AGCGCTACAG | 1 | 19725871863 | 18460919747 | 761903057021 | 38.62 | 0.94 |
| 4 | 659_1q-T1-TRNA-1_B23MHV2LT4_1 | AAGGTGTACT | AGCGCTACAG | 2 | 19725871863 | 18416370609 | 761581946469 | 38.61 | 0.93 |
| 4 | 659_ecd-T1-TRNA-1_B23MHV2LT4_1 | CTTCTAACCG | TGATCAGTCT | 1 | 17772269499 | 16635232480 | 686482196662 | 38.63 | 0.94 |
| 4 | 659_ecd-T1-TRNA-1_B23MHV2LT4_1 | CTTCTAACCG | TGATCAGTCT | 2 | 17772269499 | 16660369284 | 687737213007 | 38.70 | 0.94 |
| 4 | 659_Dd-T1-TRNA-1_B23MHV2LT4_1 | TCGACCAGCA | GTTCGAACTC | 1 | 23044225515 | 21914901256 | 898013118847 | 38.97 | 0.95 |
| 4 | 659_Dd-T1-TRNA-1_B23MHV2LT4_1 | TCGACCAGCA | GTTCGAACTC | 2 | 23044225515 | 21674841612 | 893256346956 | 38.76 | 0.94 |
| 4 | 659_cfy-T1-TRNA-1_B23MHV2LT4_1 | GTGACACGTC | CTTACACTGA | 1 | 16577842587 | 15590619979 | 642022823407 | 38.73 | 0.94 |
| 4 | 659_cfy-T1-TRNA-1_B23MHV2LT4_1 | GTGACACGTC | CTTACACTGA | 2 | 16577842587 | 15554224936 | 641726220367 | 38.71 | 0.94 |
| 4 | 659_bjQ-T1-TRNA-1_B23MHV2LT4_1 | AATGGACGCG | AAGTGCACCG | 1 | 13224483511 | 12434587412 | 512099245034 | 38.72 | 0.94 |
| 4 | 659_bjQ-T1-TRNA-1_B23MHV2LT4_1 | AATGGACGCG | AAGTGCACCG | 2 | 13224483511 | 12384171213 | 511458640116 | 38.68 | 0.94 |
| 4 | 659_bGc-T1-TRNA-1_B23MHV2LT4_1 | TCTCCGTACT | AGTTGTGATC | 1 | 12770827416 | 11781371205 | 489241831908 | 38.31 | 0.92 |
| 4 | 659_bGc-T1-TRNA-1_B23MHV2LT4_1 | TCTCCGTACT | AGTTGTGATC | 2 | 12770827416 | 11896574087 | 492466550387 | 38.56 | 0.93 |
| 4 | 659_dts-T1-TRNA-1_B23MHV2LT4_1 | TGGAAGCACA | TCCAACACCG | 1 | 12983024243 | 12028616718 | 498525182538 | 38.40 | 0.93 |
| 4 | 659_dts-T1-TRNA-1_B23MHV2LT4_1 | TGGAAGCACA | TCCAACACCG | 2 | 12983024243 | 12129429164 | 501485884289 | 38.63 | 0.93 |
| 4 | FFPE_HD789_02_RNA_0014_B23MHV2LT4_1 | GATAGACAAC | GTGTTCACGT | 1 | 14623321237 | 13955616732 | 571115138166 | 39.06 | 0.95 |
| 4 | FFPE_HD789_02_RNA_0014_B23MHV2LT4_1 | GATAGACAAC | GTGTTCACGT | 2 | 14623321237 | 13759678388 | 566902287134 | 38.77 | 0.94 |
| 4 | 659_wQ-T1-TRNA-1_B23MHV2LT4_1 | AGCGTCTCAT | CCTAGGCGAT | 1 | 12950043276 | 12350396936 | 505793326229 | 39.06 | 0.95 |
| 4 | 659_wQ-T1-TRNA-1_B23MHV2LT4_1 | AGCGTCTCAT | CCTAGGCGAT | 2 | 12950043276 | 12176158243 | 501818865088 | 38.75 | 0.94 |
| 4 | 659_cB6-T1-TRNA-1_B23MHV2LT4_1 | CTCTATACTG | CGTTCAACCG | 1 | 11374366883 | 10849224016 | 444061193914 | 39.04 | 0.95 |
| 4 | 659_cB6-T1-TRNA-1_B23MHV2LT4_1 | CTCTATACTG | CGTTCAACCG | 2 | 11374366883 | 10629287986 | 439294588438 | 38.62 | 0.93 |
| 4 | 659_cRa-T1-TRNA-1_B23MHV2LT4_1 | ATAGCCGGTT | TCTTATCCGG | 1 | 19854808800 | 18664543136 | 768852830270 | 38.72 | 0.94 |
| 4 | 659_cRa-T1-TRNA-1_B23MHV2LT4_1 | ATAGCCGGTT | TCTTATCCGG | 2 | 19854808800 | 18608536401 | 768122607849 | 38.69 | 0.94 |
| 4 | 659_cTi-T1-TRNA-1_B23MHV2LT4_1 | GTTCTCATCA | CCTCCATTCT | 1 | 17440969157 | 16208793864 | 670842845385 | 38.46 | 0.93 |
| 4 | 659_cTi-T1-TRNA-1_B23MHV2LT4_1 | GTTCTCATCA | CCTCCATTCT | 2 | 17440969157 | 16358190548 | 674980174229 | 38.70 | 0.94 |
| 4 | 659_d0M-T1-TRNA-1_B23MHV2LT4_1 | CAATGCGTGT | ATGTTCGCGC | 1 | 14758136 | 11934273 | 531405156 | 36.01 | 0.81 |
| 4 | 659_d0M-T1-TRNA-1_B23MHV2LT4_1 | CAATGCGTGT | ATGTTCGCGC | 2 | 14758136 | 10486759 | 506962759 | 34.35 | 0.71 |
| 4 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_1 | TGAGTGTACA | ATTCGCCGGT | 1 | 18833404785 | 17898228413 | 733643078327 | 38.95 | 0.95 |
| 4 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_1 | TGAGTGTACA | ATTCGCCGGT | 2 | 18833404785 | 17705159813 | 729648839429 | 38.74 | 0.94 |
| 4 | 659_cq5-T1-TRNA-1_B23MHV2LT4_1 | TGCTTCCAAG | CAGATGTTAC | 1 | 10954295 | 7031235 | 351613920 | 32.10 | 0.64 |
| 4 | 659_cq5-T1-TRNA-1_B23MHV2LT4_1 | TGCTTCCAAG | CAGATGTTAC | 2 | 10954295 | 7724258 | 374942351 | 34.23 | 0.71 |
| 4 | 659_bTq-T1-TRNA-1_B23MHV2LT4_1 | CCTACTCTGC | TGCAATTGGC | 1 | 20691528188 | 19625391544 | 805540509526 | 38.93 | 0.95 |
| 4 | 659_bTq-T1-TRNA-1_B23MHV2LT4_1 | CCTACTCTGC | TGCAATTGGC | 2 | 20691528188 | 19399173359 | 800695503545 | 38.70 | 0.94 |
| 4 | 659_cwv-T1-TRNA-1_B23MHV2LT4_1 | TCGCTGAGAG | AATGCTCTAG | 1 | 20273076535 | 19010663147 | 783749656151 | 38.66 | 0.94 |
| 4 | 659_cwv-T1-TRNA-1_B23MHV2LT4_1 | TCGCTGAGAG | AATGCTCTAG | 2 | 20273076535 | 19077368762 | 786059393558 | 38.77 | 0.94 |
| 4 | 659_bGW-T1-TRNA-1_B23MHV2LT4_1 | CGCTAATTGC | CCATCGCATT | 1 | 17429842722 | 16280038841 | 672724168943 | 38.60 | 0.93 |
| 4 | 659_bGW-T1-TRNA-1_B23MHV2LT4_1 | CGCTAATTGC | CCATCGCATT | 2 | 17429842722 | 16307079388 | 673771182514 | 38.66 | 0.94 |
| 4 | 659_dXa-T1-TRNA-1_B23MHV2LT4_1 | TCAGCTGTCA | ACAGCTCCTG | 1 | 13519511237 | 12601252480 | 520793117608 | 38.52 | 0.93 |
| 4 | 659_dXa-T1-TRNA-1_B23MHV2LT4_1 | TCAGCTGTCA | ACAGCTCCTG | 2 | 13519511237 | 12588616605 | 521179476171 | 38.55 | 0.93 |
| 4 | 659_dkd-T1-TRNA-1_B23MHV2LT4_1 | AGACGACAGA | GAGCTGGAAT | 1 | 6953701 | 4241328 | 218965401 | 31.49 | 0.61 |
| 4 | 659_dkd-T1-TRNA-1_B23MHV2LT4_1 | AGACGACAGA | GAGCTGGAAT | 2 | 6953701 | 5167557 | 243408099 | 35.00 | 0.74 |
| 4 | 659_eZ4-T1-TRNA-1_B23MHV2LT4_1 | TAGGTCCAGA | TGCTCATCCG | 1 | 10429101145 | 9866026733 | 405143148932 | 38.85 | 0.95 |
| 4 | 659_eZ4-T1-TRNA-1_B23MHV2LT4_1 | TAGGTCCAGA | TGCTCATCCG | 2 | 10429101145 | 9813506790 | 404336486019 | 38.77 | 0.94 |
| 4 | 659_eu1-T1-TRNA-1_B23MHV2LT4_1 | TAACCTGAAC | TCAATTGACG | 1 | 5145917977 | 4755122416 | 197662061908 | 38.41 | 0.92 |
| 4 | 659_eu1-T1-TRNA-1_B23MHV2LT4_1 | TAACCTGAAC | TCAATTGACG | 2 | 5145917977 | 4774667108 | 198122366162 | 38.50 | 0.93 |
| 4 | 659_dfA-T1-TRNA-1_B23MHV2LT4_1 | GATAGGTGAA | AGACGCAAGA | 1 | 18853498053 | 17877403255 | 733357058905 | 38.90 | 0.95 |
| 4 | 659_dfA-T1-TRNA-1_B23MHV2LT4_1 | GATAGGTGAA | AGACGCAAGA | 2 | 18853498053 | 17749320427 | 731092790746 | 38.78 | 0.94 |
| 4 | Undetermined | 1 | 42767554840 | 36250124605 | 1564841154187 | 36.59 | 0.85 | ||
| 4 | Undetermined | 2 | 42767554840 | 35318559142 | 1538200777555 | 35.97 | 0.83 |
99 rows