File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/bclconvert/L001/Reports/Quality_Metrics.csv
- Size
- 9.8 KB
- Workflow Run
- dev_rna_exp09_10-3b7a596a
- Published
- Jun 04, 2026 12:56 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 1 | 659_b6o-T1-TRNA-1_B23MHV2LT4_1 | TAGCGAGGCT | TTGCTCACGG | 1 | 16751336 | 11179828 | 547343029 | 32.67 | 0.67 |
| 1 | 659_b6o-T1-TRNA-1_B23MHV2LT4_1 | TAGCGAGGCT | TTGCTCACGG | 2 | 16751336 | 11067559 | 554359426 | 33.09 | 0.66 |
| 1 | 659_cAa-T1-TRNA-1_B23MHV2LT4_1 | CCAACTGTAT | GCGCTAGAGA | 1 | 12568334 | 10319686 | 455933683 | 36.28 | 0.82 |
| 1 | 659_cAa-T1-TRNA-1_B23MHV2LT4_1 | CCAACTGTAT | GCGCTAGAGA | 2 | 12568334 | 9553478 | 444594653 | 35.37 | 0.76 |
| 1 | 659_Kh-T1-TRNA-1_B23MHV2LT4_1 | GAGTAGTGAC | GCGATGCCAA | 1 | 130862942 | 122635627 | 5063510863 | 38.69 | 0.94 |
| 1 | 659_Kh-T1-TRNA-1_B23MHV2LT4_1 | GAGTAGTGAC | GCGATGCCAA | 2 | 130862942 | 120518113 | 5022604540 | 38.38 | 0.92 |
| 1 | 659_c95-T1-TRNA-1_B23MHV2LT4_1 | CCAGTATTCT | ACGAAGCGAT | 1 | 17181480338 | 16287497761 | 668390574331 | 38.90 | 0.95 |
| 1 | 659_c95-T1-TRNA-1_B23MHV2LT4_1 | CCAGTATTCT | ACGAAGCGAT | 2 | 17181480338 | 16209253446 | 666993137193 | 38.82 | 0.94 |
| 1 | 659_ciJ-T1-TRNA-1_B23MHV2LT4_1 | ATCATACCGC | ATGTCGTACT | 1 | 14912807414 | 14114584798 | 579440387641 | 38.86 | 0.95 |
| 1 | 659_ciJ-T1-TRNA-1_B23MHV2LT4_1 | ATCATACCGC | ATGTCGTACT | 2 | 14912807414 | 13993156104 | 577180794600 | 38.70 | 0.94 |
| 1 | 659_bhK-T1-TRNA-1_B23MHV2LT4_1 | ATTCGCACTA | TCTGTATGGT | 1 | 19245544789 | 18175444924 | 746888389486 | 38.81 | 0.94 |
| 1 | 659_bhK-T1-TRNA-1_B23MHV2LT4_1 | ATTCGCACTA | TCTGTATGGT | 2 | 19245544789 | 18095515803 | 745796107404 | 38.75 | 0.94 |
| 1 | 659_Lx-T1-TRNA-1_B23MHV2LT4_1 | CTCTTCAGCA | TTGTCTCTAC | 1 | 10375850089 | 9515979317 | 396042526016 | 38.17 | 0.92 |
| 1 | 659_Lx-T1-TRNA-1_B23MHV2LT4_1 | CTCTTCAGCA | TTGTCTCTAC | 2 | 10375850089 | 9710002916 | 401161340969 | 38.66 | 0.94 |
| 1 | 659_bUW-T1-TRNA-1_B23MHV2LT4_1 | CTGTATGCCA | TTCCGGCTGT | 1 | 29597380744 | 27969667253 | 1149205637228 | 38.83 | 0.95 |
| 1 | 659_bUW-T1-TRNA-1_B23MHV2LT4_1 | CTGTATGCCA | TTCCGGCTGT | 2 | 29597380744 | 27882620828 | 1148152295450 | 38.79 | 0.94 |
| 1 | 659_mK-T1-TRNA-2_B23MHV2LT4_1 | TCTGACTATG | TAACCAGATC | 1 | 10842485842 | 9942226320 | 413798033934 | 38.16 | 0.92 |
| 1 | 659_mK-T1-TRNA-2_B23MHV2LT4_1 | TCTGACTATG | TAACCAGATC | 2 | 10842485842 | 10110673291 | 418422335101 | 38.59 | 0.93 |
| 1 | 659_dwi-T1-TRNA-1_B23MHV2LT4_1 | TGTGACGTAT | GCAGCGTTAG | 1 | 20600477 | 16626013 | 740923390 | 35.97 | 0.81 |
| 1 | 659_dwi-T1-TRNA-1_B23MHV2LT4_1 | TGTGACGTAT | GCAGCGTTAG | 2 | 20600477 | 15652830 | 727796799 | 35.33 | 0.76 |
| 1 | NTC_0001_0001_B23MHV2LT4_1 | AGAAGATTGG | AGAAGGTACT | 1 | 6882429 | 4284405 | 218547765 | 31.75 | 0.62 |
| 1 | NTC_0001_0001_B23MHV2LT4_1 | AGAAGATTGG | AGAAGGTACT | 2 | 6882429 | 5149378 | 241841233 | 35.14 | 0.75 |
| 1 | 659_d01-T1-TRNA-1_B23MHV2LT4_1 | ATCCAGCATG | AGAGCTCTAC | 1 | 13051394023 | 12164818211 | 502720014614 | 38.52 | 0.93 |
| 1 | 659_d01-T1-TRNA-1_B23MHV2LT4_1 | ATCCAGCATG | AGAGCTCTAC | 2 | 13051394023 | 12195587472 | 504138720900 | 38.63 | 0.93 |
| 1 | 659_bNS-T1-TRNA-1_B23MHV2LT4_1 | GCGCCATATA | GAACCTCCTA | 1 | 15208060130 | 14342974579 | 589699906615 | 38.78 | 0.94 |
| 1 | 659_bNS-T1-TRNA-1_B23MHV2LT4_1 | GCGCCATATA | GAACCTCCTA | 2 | 15208060130 | 14339164338 | 590190737922 | 38.81 | 0.94 |
| 1 | 659_bR4-T1-TRNA-1_B23MHV2LT4_1 | CACTCGCATA | GAACGCGACA | 1 | 11291464561 | 10630517729 | 437415932195 | 38.74 | 0.94 |
| 1 | 659_bR4-T1-TRNA-1_B23MHV2LT4_1 | CACTCGCATA | GAACGCGACA | 2 | 11291464561 | 10611340062 | 437426190810 | 38.74 | 0.94 |
| 1 | 659_buD-T1-TRNA-1_B23MHV2LT4_1 | AAGGTCAATG | GCATTATAGG | 1 | 15448956923 | 14488623670 | 597161107804 | 38.65 | 0.94 |
| 1 | 659_buD-T1-TRNA-1_B23MHV2LT4_1 | AAGGTCAATG | GCATTATAGG | 2 | 15448956923 | 14530213785 | 598803602493 | 38.76 | 0.94 |
| 1 | 659_cYf-T1-TRNA-1_B23MHV2LT4_1 | GTGACGCACA | CGTTGTTGCG | 1 | 16590724548 | 15458793571 | 639054735928 | 38.52 | 0.93 |
| 1 | 659_cYf-T1-TRNA-1_B23MHV2LT4_1 | GTGACGCACA | CGTTGTTGCG | 2 | 16590724548 | 15422610593 | 638929955663 | 38.51 | 0.93 |
| 1 | 659_R1-T1-TRNA-1_B23MHV2LT4_1 | TGTCAGGCTT | GATTCCTTAC | 1 | 19040043 | 12944788 | 627441577 | 32.95 | 0.68 |
| 1 | 659_R1-T1-TRNA-1_B23MHV2LT4_1 | TGTCAGGCTT | GATTCCTTAC | 2 | 19040043 | 12307146 | 624399426 | 32.79 | 0.65 |
| 1 | 659_eGK-T1-TRNA-1_B23MHV2LT4_1 | CACGTGATGG | TACAACGTGT | 1 | 16073846716 | 15236686836 | 625248710634 | 38.90 | 0.95 |
| 1 | 659_eGK-T1-TRNA-1_B23MHV2LT4_1 | CACGTGATGG | TACAACGTGT | 2 | 16073846716 | 15200706763 | 624820751950 | 38.87 | 0.95 |
| 1 | 659_On-T1-TRNA-2_B23MHV2LT4_1 | CCATCACGTG | TCTCCTGGTT | 1 | 12876648065 | 12159270022 | 499654208797 | 38.80 | 0.94 |
| 1 | 659_On-T1-TRNA-2_B23MHV2LT4_1 | CCATCACGTG | TCTCCTGGTT | 2 | 12876648065 | 12149789073 | 499901500233 | 38.82 | 0.94 |
| 1 | 659_d0V-T1-TRNA-1_B23MHV2LT4_1 | ACCAGGAATT | AGCATGGCAT | 1 | 14007817 | 9340782 | 457232448 | 32.64 | 0.67 |
| 1 | 659_d0V-T1-TRNA-1_B23MHV2LT4_1 | ACCAGGAATT | AGCATGGCAT | 2 | 14007817 | 10330853 | 489633599 | 34.95 | 0.74 |
| 1 | 659_8h-T1-TRNA-1_B23MHV2LT4_1 | TAAGGCTCAC | GACGTTACTT | 1 | 10882721 | 7674257 | 365380700 | 33.57 | 0.71 |
| 1 | 659_8h-T1-TRNA-1_B23MHV2LT4_1 | TAAGGCTCAC | GACGTTACTT | 2 | 10882721 | 7347225 | 364906902 | 33.53 | 0.68 |
| 1 | 659_Dl-T1-TRNA-1_B23MHV2LT4_1 | TGGCACTGAT | GCCATAGAAT | 1 | 7853563152 | 7325774479 | 302782480426 | 38.55 | 0.93 |
| 1 | 659_Dl-T1-TRNA-1_B23MHV2LT4_1 | TGGCACTGAT | GCCATAGAAT | 2 | 7853563152 | 7352961373 | 303611341078 | 38.66 | 0.94 |
| 1 | 659_eKx-T1-TRNA-1_B23MHV2LT4_1 | CATATGGTGC | ACAGATCTCA | 1 | 15142129 | 11441269 | 526598107 | 34.78 | 0.76 |
| 1 | 659_eKx-T1-TRNA-1_B23MHV2LT4_1 | CATATGGTGC | ACAGATCTCA | 2 | 15142129 | 10713021 | 520270008 | 34.36 | 0.71 |
| 1 | 659_dES-T1-TRNA-1_B23MHV2LT4_1 | GCACTACCAG | GAAGACTTAG | 1 | 11939475172 | 11126238872 | 459930244283 | 38.52 | 0.93 |
| 1 | 659_dES-T1-TRNA-1_B23MHV2LT4_1 | GCACTACCAG | GAAGACTTAG | 2 | 11939475172 | 11214676630 | 462441556219 | 38.73 | 0.94 |
| 1 | 659_ri-T1-TRNA-1_B23MHV2LT4_1 | GCATAAGATC | GAGAACTGGA | 1 | 6365380085 | 5763299203 | 241313471359 | 37.91 | 0.91 |
| 1 | 659_ri-T1-TRNA-1_B23MHV2LT4_1 | GCATAAGATC | GAGAACTGGA | 2 | 6365380085 | 5919652500 | 245325381894 | 38.54 | 0.93 |
| 1 | 659_1q-T1-TRNA-1_B23MHV2LT4_1 | AAGGTGTACT | AGCGCTACAG | 1 | 19907078507 | 18637571612 | 768823262402 | 38.62 | 0.94 |
| 1 | 659_1q-T1-TRNA-1_B23MHV2LT4_1 | AAGGTGTACT | AGCGCTACAG | 2 | 19907078507 | 18616775384 | 769249161566 | 38.64 | 0.94 |
| 1 | 659_ecd-T1-TRNA-1_B23MHV2LT4_1 | CTTCTAACCG | TGATCAGTCT | 1 | 18147825223 | 17017969580 | 701764508081 | 38.67 | 0.94 |
| 1 | 659_ecd-T1-TRNA-1_B23MHV2LT4_1 | CTTCTAACCG | TGATCAGTCT | 2 | 18147825223 | 17045033851 | 702957114091 | 38.74 | 0.94 |
| 1 | 659_Dd-T1-TRNA-1_B23MHV2LT4_1 | TCGACCAGCA | GTTCGAACTC | 1 | 23938327772 | 22805089052 | 933728271362 | 39.01 | 0.95 |
| 1 | 659_Dd-T1-TRNA-1_B23MHV2LT4_1 | TCGACCAGCA | GTTCGAACTC | 2 | 23938327772 | 22575492981 | 929145784554 | 38.81 | 0.94 |
| 1 | 659_cfy-T1-TRNA-1_B23MHV2LT4_1 | GTGACACGTC | CTTACACTGA | 1 | 17121819634 | 16119291481 | 663339048079 | 38.74 | 0.94 |
| 1 | 659_cfy-T1-TRNA-1_B23MHV2LT4_1 | GTGACACGTC | CTTACACTGA | 2 | 17121819634 | 16101579631 | 663549347713 | 38.75 | 0.94 |
| 1 | 659_bjQ-T1-TRNA-1_B23MHV2LT4_1 | AATGGACGCG | AAGTGCACCG | 1 | 13576608716 | 12788446339 | 526303233853 | 38.77 | 0.94 |
| 1 | 659_bjQ-T1-TRNA-1_B23MHV2LT4_1 | AATGGACGCG | AAGTGCACCG | 2 | 13576608716 | 12738538217 | 525589045646 | 38.71 | 0.94 |
| 1 | 659_bGc-T1-TRNA-1_B23MHV2LT4_1 | TCTCCGTACT | AGTTGTGATC | 1 | 12984974257 | 11981962166 | 497330773319 | 38.30 | 0.92 |
| 1 | 659_bGc-T1-TRNA-1_B23MHV2LT4_1 | TCTCCGTACT | AGTTGTGATC | 2 | 12984974257 | 12116773143 | 501179302338 | 38.60 | 0.93 |
| 1 | 659_dts-T1-TRNA-1_B23MHV2LT4_1 | TGGAAGCACA | TCCAACACCG | 1 | 13394592410 | 12435937696 | 515007270604 | 38.45 | 0.93 |
| 1 | 659_dts-T1-TRNA-1_B23MHV2LT4_1 | TGGAAGCACA | TCCAACACCG | 2 | 13394592410 | 12539296712 | 517915817585 | 38.67 | 0.94 |
| 1 | FFPE_HD789_02_RNA_0014_B23MHV2LT4_1 | GATAGACAAC | GTGTTCACGT | 1 | 14981843708 | 14309432855 | 585217388852 | 39.06 | 0.96 |
| 1 | FFPE_HD789_02_RNA_0014_B23MHV2LT4_1 | GATAGACAAC | GTGTTCACGT | 2 | 14981843708 | 14131390657 | 581510949091 | 38.81 | 0.94 |
| 1 | 659_wQ-T1-TRNA-1_B23MHV2LT4_1 | AGCGTCTCAT | CCTAGGCGAT | 1 | 13443304557 | 12822915059 | 524985005564 | 39.05 | 0.95 |
| 1 | 659_wQ-T1-TRNA-1_B23MHV2LT4_1 | AGCGTCTCAT | CCTAGGCGAT | 2 | 13443304557 | 12666783178 | 521481871477 | 38.79 | 0.94 |
| 1 | 659_cB6-T1-TRNA-1_B23MHV2LT4_1 | CTCTATACTG | CGTTCAACCG | 1 | 11550624351 | 11034825294 | 451319970921 | 39.07 | 0.96 |
| 1 | 659_cB6-T1-TRNA-1_B23MHV2LT4_1 | CTCTATACTG | CGTTCAACCG | 2 | 11550624351 | 10818690839 | 446620307801 | 38.67 | 0.94 |
| 1 | 659_cRa-T1-TRNA-1_B23MHV2LT4_1 | ATAGCCGGTT | TCTTATCCGG | 1 | 20421956797 | 19213170605 | 790964455544 | 38.73 | 0.94 |
| 1 | 659_cRa-T1-TRNA-1_B23MHV2LT4_1 | ATAGCCGGTT | TCTTATCCGG | 2 | 20421956797 | 19180904487 | 790912470315 | 38.73 | 0.94 |
| 1 | 659_cTi-T1-TRNA-1_B23MHV2LT4_1 | GTTCTCATCA | CCTCCATTCT | 1 | 18194695623 | 16934968171 | 700342841431 | 38.49 | 0.93 |
| 1 | 659_cTi-T1-TRNA-1_B23MHV2LT4_1 | GTTCTCATCA | CCTCCATTCT | 2 | 18194695623 | 17104247069 | 704973741968 | 38.75 | 0.94 |
| 1 | 659_d0M-T1-TRNA-1_B23MHV2LT4_1 | CAATGCGTGT | ATGTTCGCGC | 1 | 15019064 | 11972037 | 536689071 | 35.73 | 0.80 |
| 1 | 659_d0M-T1-TRNA-1_B23MHV2LT4_1 | CAATGCGTGT | ATGTTCGCGC | 2 | 15019064 | 11105950 | 525469300 | 34.99 | 0.74 |
| 1 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_1 | TGAGTGTACA | ATTCGCCGGT | 1 | 19359390333 | 18430735620 | 754864000317 | 38.99 | 0.95 |
| 1 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_1 | TGAGTGTACA | ATTCGCCGGT | 2 | 19359390333 | 18242187134 | 750908641589 | 38.79 | 0.94 |
| 1 | 659_cq5-T1-TRNA-1_B23MHV2LT4_1 | TGCTTCCAAG | CAGATGTTAC | 1 | 11063015 | 7039555 | 353741725 | 31.98 | 0.64 |
| 1 | 659_cq5-T1-TRNA-1_B23MHV2LT4_1 | TGCTTCCAAG | CAGATGTTAC | 2 | 11063015 | 8113901 | 385785095 | 34.87 | 0.73 |
| 1 | 659_bTq-T1-TRNA-1_B23MHV2LT4_1 | CCTACTCTGC | TGCAATTGGC | 1 | 21198753647 | 20106064859 | 824991371153 | 38.92 | 0.95 |
| 1 | 659_bTq-T1-TRNA-1_B23MHV2LT4_1 | CCTACTCTGC | TGCAATTGGC | 2 | 21198753647 | 19920727658 | 821291175578 | 38.74 | 0.94 |
| 1 | 659_cwv-T1-TRNA-1_B23MHV2LT4_1 | TCGCTGAGAG | AATGCTCTAG | 1 | 20685803023 | 19421212220 | 800123075690 | 38.68 | 0.94 |
| 1 | 659_cwv-T1-TRNA-1_B23MHV2LT4_1 | TCGCTGAGAG | AATGCTCTAG | 2 | 20685803023 | 19500051683 | 802769308460 | 38.81 | 0.94 |
| 1 | 659_bGW-T1-TRNA-1_B23MHV2LT4_1 | CGCTAATTGC | CCATCGCATT | 1 | 17803891013 | 16616975226 | 686563787160 | 38.56 | 0.93 |
| 1 | 659_bGW-T1-TRNA-1_B23MHV2LT4_1 | CGCTAATTGC | CCATCGCATT | 2 | 17803891013 | 16688493532 | 688898323018 | 38.69 | 0.94 |
| 1 | 659_dXa-T1-TRNA-1_B23MHV2LT4_1 | TCAGCTGTCA | ACAGCTCCTG | 1 | 13718935125 | 12800909036 | 528722020460 | 38.54 | 0.93 |
| 1 | 659_dXa-T1-TRNA-1_B23MHV2LT4_1 | TCAGCTGTCA | ACAGCTCCTG | 2 | 13718935125 | 12798701736 | 529386096612 | 38.59 | 0.93 |
| 1 | 659_dkd-T1-TRNA-1_B23MHV2LT4_1 | AGACGACAGA | GAGCTGGAAT | 1 | 6992357 | 4272481 | 220509676 | 31.54 | 0.61 |
| 1 | 659_dkd-T1-TRNA-1_B23MHV2LT4_1 | AGACGACAGA | GAGCTGGAAT | 2 | 6992357 | 5355601 | 248278492 | 35.51 | 0.77 |
| 1 | 659_eZ4-T1-TRNA-1_B23MHV2LT4_1 | TAGGTCCAGA | TGCTCATCCG | 1 | 10734488075 | 10171279218 | 417350229684 | 38.88 | 0.95 |
| 1 | 659_eZ4-T1-TRNA-1_B23MHV2LT4_1 | TAGGTCCAGA | TGCTCATCCG | 2 | 10734488075 | 10124673584 | 416673570305 | 38.82 | 0.94 |
| 1 | 659_eu1-T1-TRNA-1_B23MHV2LT4_1 | TAACCTGAAC | TCAATTGACG | 1 | 5235905370 | 4825443503 | 200761324058 | 38.34 | 0.92 |
| 1 | 659_eu1-T1-TRNA-1_B23MHV2LT4_1 | TAACCTGAAC | TCAATTGACG | 2 | 5235905370 | 4863827076 | 201713134221 | 38.52 | 0.93 |
| 1 | 659_dfA-T1-TRNA-1_B23MHV2LT4_1 | GATAGGTGAA | AGACGCAAGA | 1 | 19414192008 | 18436004817 | 755685524850 | 38.92 | 0.95 |
| 1 | 659_dfA-T1-TRNA-1_B23MHV2LT4_1 | GATAGGTGAA | AGACGCAAGA | 2 | 19414192008 | 18311375095 | 753530384035 | 38.81 | 0.94 |
| 1 | Undetermined | 1 | 40514628951 | 34477647222 | 1485009448878 | 36.65 | 0.85 | ||
| 1 | Undetermined | 2 | 40514628951 | 33409296443 | 1455877888487 | 35.93 | 0.82 |
99 rows