File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/bclconvert/L005/Reports/Quality_Metrics.csv
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- 9.9 KB
- Workflow Run
- dev_rna_exp09_10-3b7a596a
- Published
- Jun 04, 2026 12:59 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 5 | 659_Fr-T1-TRNA-1_B23MHV2LT4_1 | CAACCATACA | ACCGGTTATA | 1 | 14700478613 | 14007328996 | 573082573177 | 38.98 | 0.95 |
| 5 | 659_Fr-T1-TRNA-1_B23MHV2LT4_1 | CAACCATACA | ACCGGTTATA | 2 | 14700478613 | 13859280686 | 570522852263 | 38.81 | 0.94 |
| 5 | 659_bQZ-T1-TRNA-1_B23MHV2LT4_1 | GTAGGCCGTT | GCCACTGTCT | 1 | 15510985609 | 14834479415 | 606404855723 | 39.10 | 0.96 |
| 5 | 659_bQZ-T1-TRNA-1_B23MHV2LT4_1 | GTAGGCCGTT | GCCACTGTCT | 2 | 15510985609 | 14669501609 | 602938406759 | 38.87 | 0.95 |
| 5 | 659_ezg-T1-TRNA-1_B23MHV2LT4_1 | CGGATTGATC | AGTCACAACA | 1 | 15697033162 | 14979865301 | 612894974330 | 39.05 | 0.95 |
| 5 | 659_ezg-T1-TRNA-1_B23MHV2LT4_1 | CGGATTGATC | AGTCACAACA | 2 | 15697033162 | 14861472813 | 610453982928 | 38.89 | 0.95 |
| 5 | 659_dRe-T1-TRNA-1_B23MHV2LT4_1 | ACTGGCAAGA | TGTTGTCCAT | 1 | 10324657616 | 9848761933 | 402823892497 | 39.02 | 0.95 |
| 5 | 659_dRe-T1-TRNA-1_B23MHV2LT4_1 | ACTGGCAAGA | TGTTGTCCAT | 2 | 10324657616 | 9774585451 | 401578811038 | 38.90 | 0.95 |
| 5 | 659_b7Z-T1-TRNA-1_B23MHV2LT4_1 | ACAAGAACCT | CGATACTGAA | 1 | 19782056698 | 19002420299 | 775141099730 | 39.18 | 0.96 |
| 5 | 659_b7Z-T1-TRNA-1_B23MHV2LT4_1 | ACAAGAACCT | CGATACTGAA | 2 | 19782056698 | 18748394610 | 769692905301 | 38.91 | 0.95 |
| 5 | 659_dQk-T1-TRNA-1_B23MHV2LT4_1 | AGAGTATGTG | AGATGGCTTC | 1 | 12847231 | 8223090 | 412070904 | 32.07 | 0.64 |
| 5 | 659_dQk-T1-TRNA-1_B23MHV2LT4_1 | AGAGTATGTG | AGATGGCTTC | 2 | 12847231 | 8927158 | 437144983 | 34.03 | 0.69 |
| 5 | 659_SP-T1-TRNA-1_B23MHV2LT4_1 | ACTTAGATCG | CGGAATTCTT | 1 | 15151071069 | 14332822699 | 588263003227 | 38.83 | 0.95 |
| 5 | 659_SP-T1-TRNA-1_B23MHV2LT4_1 | ACTTAGATCG | CGGAATTCTT | 2 | 15151071069 | 14299457067 | 588277088349 | 38.83 | 0.94 |
| 5 | 659_bTo-T1-TRNA-1_B23MHV2LT4_1 | GATCAACAAG | AAGCACTGTC | 1 | 12862720731 | 12241583309 | 501317998286 | 38.97 | 0.95 |
| 5 | 659_bTo-T1-TRNA-1_B23MHV2LT4_1 | GATCAACAAG | AAGCACTGTC | 2 | 12862720731 | 12126200580 | 499116870201 | 38.80 | 0.94 |
| 5 | 659_dHy-T1-TRNA-1_B23MHV2LT4_1 | ACCTTCGGAC | GACCGTAGAT | 1 | 13023524104 | 12544997710 | 511387603129 | 39.27 | 0.96 |
| 5 | 659_dHy-T1-TRNA-1_B23MHV2LT4_1 | ACCTTCGGAC | GACCGTAGAT | 2 | 13023524104 | 12339402999 | 506695240383 | 38.91 | 0.95 |
| 5 | FFPE_HD789_02_RNA_0015_B23MHV2LT4_1 | TATCATGTCG | TAATCTGCAC | 1 | 28968815007 | 27964049342 | 1138251509378 | 39.29 | 0.97 |
| 5 | FFPE_HD789_02_RNA_0015_B23MHV2LT4_1 | TATCATGTCG | TAATCTGCAC | 2 | 28968815007 | 27465612587 | 1127540242814 | 38.92 | 0.95 |
| 5 | 659_Mt-T1-TRNA-1_B23MHV2LT4_1 | CGTCTAGTAA | TTAATCCAGC | 1 | 11633161706 | 11003101496 | 451562711627 | 38.82 | 0.95 |
| 5 | 659_Mt-T1-TRNA-1_B23MHV2LT4_1 | CGTCTAGTAA | TTAATCCAGC | 2 | 11633161706 | 10983658993 | 451814375143 | 38.84 | 0.94 |
| 5 | 659_epZ-T1-TRNA-1_B23MHV2LT4_1 | TCTTAGGTGG | GATCACTGGT | 1 | 20018845385 | 18950497180 | 777888743449 | 38.86 | 0.95 |
| 5 | 659_epZ-T1-TRNA-1_B23MHV2LT4_1 | TCTTAGGTGG | GATCACTGGT | 2 | 20018845385 | 18710635481 | 773223345470 | 38.62 | 0.93 |
| 5 | 659_djb-T1-TRNA-1_B23MHV2LT4_1 | TCGACGTTGG | GATAAGTGTG | 1 | 12021207848 | 11350727897 | 466354861874 | 38.79 | 0.94 |
| 5 | 659_djb-T1-TRNA-1_B23MHV2LT4_1 | TCGACGTTGG | GATAAGTGTG | 2 | 12021207848 | 11273518447 | 465145335505 | 38.69 | 0.94 |
| 5 | 659_end-T1-TRNA-1_B23MHV2LT4_1 | AAGAGTACGA | GCAAGGACGT | 1 | 15268579269 | 14587990958 | 596302120706 | 39.05 | 0.96 |
| 5 | 659_end-T1-TRNA-1_B23MHV2LT4_1 | AAGAGTACGA | GCAAGGACGT | 2 | 15268579269 | 14475014610 | 594294695814 | 38.92 | 0.95 |
| 5 | 659_bKP-T1-TRNA-1_B23MHV2LT4_1 | CACGAGAAGT | GTCTGCGTAG | 1 | 11778232540 | 11194344473 | 458875637258 | 38.96 | 0.95 |
| 5 | 659_bKP-T1-TRNA-1_B23MHV2LT4_1 | CACGAGAAGT | GTCTGCGTAG | 2 | 11778232540 | 11096614491 | 456790840251 | 38.78 | 0.94 |
| 5 | 659_gK-T1-TRNA-1_B23MHV2LT4_1 | GACAATTAGC | CCGGTCATGA | 1 | 11305733457 | 10820624409 | 442019282781 | 39.10 | 0.96 |
| 5 | 659_gK-T1-TRNA-1_B23MHV2LT4_1 | GACAATTAGC | CCGGTCATGA | 2 | 11305733457 | 10703818807 | 439720257373 | 38.89 | 0.95 |
| 5 | 659_cuO-T1-TRNA-1_B23MHV2LT4_1 | TTCTACCGGC | TACTCGTAAG | 1 | 7127804 | 4877665 | 235557367 | 33.05 | 0.68 |
| 5 | 659_cuO-T1-TRNA-1_B23MHV2LT4_1 | TTCTACCGGC | TACTCGTAAG | 2 | 7127804 | 4967905 | 242946313 | 34.08 | 0.70 |
| 5 | 659_eHw-T1-TRNA-1_B23MHV2LT4_1 | GTGAGAGTAT | ATCTGTGAGG | 1 | 34152354936 | 32904008909 | 1341278247122 | 39.27 | 0.96 |
| 5 | 659_eHw-T1-TRNA-1_B23MHV2LT4_1 | GTGAGAGTAT | ATCTGTGAGG | 2 | 34152354936 | 32211038951 | 1325570274044 | 38.81 | 0.94 |
| 5 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_2 | CTGGAGAATA | TCCATACAAC | 1 | 20393304094 | 19537135711 | 797949205660 | 39.13 | 0.96 |
| 5 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_2 | CTGGAGAATA | TCCATACAAC | 2 | 20393304094 | 19329540381 | 793617673506 | 38.92 | 0.95 |
| 5 | 659_rd-T1-TRNA-1_B23MHV2LT4_1 | TGACAAGAGG | AATCTGTTGG | 1 | 7954723035 | 7634846699 | 311507455892 | 39.16 | 0.96 |
| 5 | 659_rd-T1-TRNA-1_B23MHV2LT4_1 | TGACAAGAGG | AATCTGTTGG | 2 | 7954723035 | 7563400764 | 310092016974 | 38.98 | 0.95 |
| 5 | 659_epP-T1-TRNA-1_B23MHV2LT4_1 | TGTTCGCTCT | ACTTGCGTGT | 1 | 19152117465 | 18468551462 | 752392137251 | 39.29 | 0.96 |
| 5 | 659_epP-T1-TRNA-1_B23MHV2LT4_1 | TGTTCGCTCT | ACTTGCGTGT | 2 | 19152117465 | 18125234749 | 744650292823 | 38.88 | 0.95 |
| 5 | 659_ciZ-T1-TRNA-1_B23MHV2LT4_1 | AGGTATTCGG | AGATGTGCGC | 1 | 10687931000 | 10117583209 | 415116228430 | 38.84 | 0.95 |
| 5 | 659_ciZ-T1-TRNA-1_B23MHV2LT4_1 | AGGTATTCGG | AGATGTGCGC | 2 | 10687931000 | 10057758269 | 414452665772 | 38.78 | 0.94 |
| 5 | 659_dKM-T1-TRNA-1_B23MHV2LT4_1 | ACGGCCTACA | TCTCACTCTA | 1 | 12220279453 | 11581313213 | 474953623337 | 38.87 | 0.95 |
| 5 | 659_dKM-T1-TRNA-1_B23MHV2LT4_1 | ACGGCCTACA | TCTCACTCTA | 2 | 12220279453 | 11550911689 | 474853466017 | 38.86 | 0.95 |
| 5 | 659_eeB-T1-TRNA-1_B23MHV2LT4_1 | CACGTAAGAG | TCAATCCGCG | 1 | 7745092 | 4893948 | 247034202 | 31.90 | 0.63 |
| 5 | 659_eeB-T1-TRNA-1_B23MHV2LT4_1 | CACGTAAGAG | TCAATCCGCG | 2 | 7745092 | 5431805 | 265407077 | 34.27 | 0.70 |
| 5 | 659_buj-T1-TRNA-1_B23MHV2LT4_1 | AATCGAACTC | ACGAACCTTA | 1 | 11771507 | 7576946 | 378146126 | 32.12 | 0.64 |
| 5 | 659_buj-T1-TRNA-1_B23MHV2LT4_1 | AATCGAACTC | ACGAACCTTA | 2 | 11771507 | 7247969 | 378696011 | 32.17 | 0.62 |
| 5 | 659_cGW-T1-TRNA-1_B23MHV2LT4_1 | AGGCTGGAGA | CAACTGTCAT | 1 | 3612119773 | 3410725814 | 140152752245 | 38.80 | 0.94 |
| 5 | 659_cGW-T1-TRNA-1_B23MHV2LT4_1 | AGGCTGGAGA | CAACTGTCAT | 2 | 3612119773 | 3379572446 | 139576877957 | 38.64 | 0.94 |
| 5 | 659_cAd-T1-TRNA-1_B23MHV2LT4_1 | TAAGCCACGC | TTACGAACGA | 1 | 10998533319 | 10413339635 | 427691637530 | 38.89 | 0.95 |
| 5 | 659_cAd-T1-TRNA-1_B23MHV2LT4_1 | TAAGCCACGC | TTACGAACGA | 2 | 10998533319 | 10349201476 | 426395994871 | 38.77 | 0.94 |
| 5 | 659_cRB-T1-TRNA-1_B23MHV2LT4_1 | TCAATCAGAG | GACTCTGGTT | 1 | 7053627213 | 6614205391 | 272429278027 | 38.62 | 0.94 |
| 5 | 659_cRB-T1-TRNA-1_B23MHV2LT4_1 | TCAATCAGAG | GACTCTGGTT | 2 | 7053627213 | 6639609525 | 273555610584 | 38.78 | 0.94 |
| 5 | 659_bIB-T1-TRNA-1_B23MHV2LT4_1 | AACATAAGGC | GTTAGCTTAG | 1 | 14152581002 | 13600386678 | 554792162142 | 39.20 | 0.96 |
| 5 | 659_bIB-T1-TRNA-1_B23MHV2LT4_1 | AACATAAGGC | GTTAGCTTAG | 2 | 14152581002 | 13410234564 | 550681185348 | 38.91 | 0.95 |
| 5 | 659_zO-T1-TRNA-1_B23MHV2LT4_1 | TTGCAATGCG | CGAGACTTCA | 1 | 13509736403 | 12848295833 | 526294666934 | 38.96 | 0.95 |
| 5 | 659_zO-T1-TRNA-1_B23MHV2LT4_1 | TTGCAATGCG | CGAGACTTCA | 2 | 13509736403 | 12758961573 | 524757807108 | 38.84 | 0.94 |
| 5 | 659_dcz-T1-TRNA-1_B23MHV2LT4_1 | AACCGGCCTT | TGTTCAGATC | 1 | 6089983718 | 5614791305 | 233122739618 | 38.28 | 0.92 |
| 5 | 659_dcz-T1-TRNA-1_B23MHV2LT4_1 | AACCGGCCTT | TGTTCAGATC | 2 | 6089983718 | 5679111317 | 235007654141 | 38.59 | 0.93 |
| 5 | 659_bUs-T1-TRNA-1_B23MHV2LT4_1 | CATTATCGCT | CGAGTTGCTT | 1 | 17671778999 | 17019357621 | 693471084372 | 39.24 | 0.96 |
| 5 | 659_bUs-T1-TRNA-1_B23MHV2LT4_1 | CATTATCGCT | CGAGTTGCTT | 2 | 17671778999 | 16777647596 | 688268500970 | 38.95 | 0.95 |
| 5 | 659_bMa-T1-TRNA-1_B23MHV2LT4_1 | CATTGAGCTA | ACTTCACATC | 1 | 6095814583 | 5648383488 | 233860901589 | 38.36 | 0.93 |
| 5 | 659_bMa-T1-TRNA-1_B23MHV2LT4_1 | CATTGAGCTA | ACTTCACATC | 2 | 6095814583 | 5690151481 | 235327670440 | 38.60 | 0.93 |
| 5 | 659_b4x-T1-TRNA-1_B23MHV2LT4_1 | CTTCGGAATC | CGTCGGTAAG | 1 | 2769479373 | 2543568760 | 105788369494 | 38.20 | 0.92 |
| 5 | 659_b4x-T1-TRNA-1_B23MHV2LT4_1 | CTTCGGAATC | CGTCGGTAAG | 2 | 2769479373 | 2567022253 | 106469836261 | 38.44 | 0.93 |
| 5 | 659_dc8-T1-TRNA-1_B23MHV2LT4_1 | AACCACACTA | CCTCTGCTGA | 1 | 17742458928 | 16931667397 | 692360075530 | 39.02 | 0.95 |
| 5 | 659_dc8-T1-TRNA-1_B23MHV2LT4_1 | AACCACACTA | CCTCTGCTGA | 2 | 17742458928 | 16790103342 | 689832373005 | 38.88 | 0.95 |
| 5 | 659_cWx-T1-TRNA-1_B23MHV2LT4_1 | GTACAGCGGA | CAATCTGTGT | 1 | 13589444471 | 12970022267 | 530378410658 | 39.03 | 0.95 |
| 5 | 659_cWx-T1-TRNA-1_B23MHV2LT4_1 | GTACAGCGGA | CAATCTGTGT | 2 | 13589444471 | 12808627479 | 527260040145 | 38.80 | 0.94 |
| 5 | 659_cVw-T1-TRNA-1_B23MHV2LT4_1 | ACTTCAACAG | GCGTGAGCAT | 1 | 18546184514 | 17839486132 | 727312892182 | 39.22 | 0.96 |
| 5 | 659_cVw-T1-TRNA-1_B23MHV2LT4_1 | ACTTCAACAG | GCGTGAGCAT | 2 | 18546184514 | 17578983040 | 721761408481 | 38.92 | 0.95 |
| 5 | 659_dm4-T1-TRNA-1_B23MHV2LT4_1 | TGGACAATAG | GAGTCCTGTG | 1 | 7234457414 | 6748619445 | 278754824409 | 38.53 | 0.93 |
| 5 | 659_dm4-T1-TRNA-1_B23MHV2LT4_1 | TGGACAATAG | GAGTCCTGTG | 2 | 7234457414 | 6801270714 | 280344873579 | 38.75 | 0.94 |
| 5 | 659_epG-T1-TRNA-1_B23MHV2LT4_1 | TCACACGGAT | CTTCTGATCG | 1 | 15182052796 | 14504132223 | 593219306010 | 39.07 | 0.96 |
| 5 | 659_epG-T1-TRNA-1_B23MHV2LT4_1 | TCACACGGAT | CTTCTGATCG | 2 | 15182052796 | 14359298501 | 590121683231 | 38.87 | 0.95 |
| 5 | 659_6i-T1-TRNA-1_B23MHV2LT4_1 | AGGATACGGT | AACCACGTCA | 1 | 7956615367 | 7460018015 | 307703930246 | 38.67 | 0.94 |
| 5 | 659_6i-T1-TRNA-1_B23MHV2LT4_1 | AGGATACGGT | AACCACGTCA | 2 | 7956615367 | 7449633453 | 307652421432 | 38.67 | 0.94 |
| 5 | 659_e0S-T1-TRNA-1_B23MHV2LT4_1 | GCTACAGGTC | TTATGCAGGA | 1 | 8656981 | 5815850 | 283740182 | 32.78 | 0.67 |
| 5 | 659_e0S-T1-TRNA-1_B23MHV2LT4_1 | GCTACAGGTC | TTATGCAGGA | 2 | 8656981 | 6127461 | 297592479 | 34.38 | 0.71 |
| 5 | 659_egp-T1-TRNA-1_B23MHV2LT4_1 | GCCAAGTAAC | TGCGTGATGA | 1 | 7409570 | 4988908 | 243043243 | 32.80 | 0.67 |
| 5 | 659_egp-T1-TRNA-1_B23MHV2LT4_1 | GCCAAGTAAC | TGCGTGATGA | 2 | 7409570 | 5294754 | 255830304 | 34.53 | 0.71 |
| 5 | 659_bCu-T1-TRNA-1_B23MHV2LT4_1 | TTGTGAAGGC | TCGTCAGTAC | 1 | 9816559981 | 9210547224 | 379767370956 | 38.69 | 0.94 |
| 5 | 659_bCu-T1-TRNA-1_B23MHV2LT4_1 | TTGTGAAGGC | TCGTCAGTAC | 2 | 9816559981 | 9160725993 | 378828871413 | 38.59 | 0.93 |
| 5 | 659_cIX-T1-TRNA-1_B23MHV2LT4_1 | GTCGACTCCT | TGCCGTTAGC | 1 | 16446285196 | 15677813144 | 641830678403 | 39.03 | 0.95 |
| 5 | 659_cIX-T1-TRNA-1_B23MHV2LT4_1 | GTCGACTCCT | TGCCGTTAGC | 2 | 16446285196 | 15506694650 | 638184786698 | 38.80 | 0.94 |
| 5 | 659_bua-T1-TRNA-1_B23MHV2LT4_1 | CTGAGCTTGT | CTTCTTGCGT | 1 | 17457130536 | 16684265763 | 682627707792 | 39.10 | 0.96 |
| 5 | 659_bua-T1-TRNA-1_B23MHV2LT4_1 | CTGAGCTTGT | CTTCTTGCGT | 2 | 17457130536 | 16494216451 | 678238534543 | 38.85 | 0.94 |
| 5 | 659_ePR-T1-TRNA-1_B23MHV2LT4_1 | CCTCTGTCAT | CGTATCGATT | 1 | 16566197014 | 15888643628 | 648905403572 | 39.17 | 0.96 |
| 5 | 659_ePR-T1-TRNA-1_B23MHV2LT4_1 | CCTCTGTCAT | CGTATCGATT | 2 | 16566197014 | 15658942968 | 643666102101 | 38.85 | 0.95 |
| 5 | 659_Wm-T1-TRNA-1_B23MHV2LT4_1 | GCAGATGTAA | TACACGCCTC | 1 | 13647984 | 8750476 | 438182806 | 32.11 | 0.64 |
| 5 | 659_Wm-T1-TRNA-1_B23MHV2LT4_1 | GCAGATGTAA | TACACGCCTC | 2 | 13647984 | 8684366 | 448704404 | 32.88 | 0.64 |
| 5 | NTC_0001_0001_B23MHV2LT4_2 | CTCATCATCT | TAAGCCTCTA | 1 | 9820436 | 6526205 | 320211518 | 32.61 | 0.66 |
| 5 | NTC_0001_0001_B23MHV2LT4_2 | CTCATCATCT | TAAGCCTCTA | 2 | 9820436 | 6577693 | 329917558 | 33.60 | 0.67 |
| 5 | Undetermined | 1 | 40293305382 | 32579544940 | 1436425624654 | 35.65 | 0.81 | ||
| 5 | Undetermined | 2 | 40293305382 | 31601138855 | 1406159974325 | 34.90 | 0.78 |
99 rows