File Info
- Filename
- Adapter_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/bclconvert/L003/Reports/Adapter_Metrics.csv
- Size
- 7.3 KB
- Workflow Run
- dev_rna_exp09_10-3b7a596a
- Published
- Jun 04, 2026 1:04 PM
Content
View in new tab| Lane | Sample_ID | index | index2 | ReadNumber | AdapterBases | SampleBases | % Adapter Bases |
| 3 | 659_b6o-T1-TRNA-1_B23MHV2LT4_1 | TAGCGAGGCT | TTGCTCACGG | 1 | 0 | 16708150 | 0.000 |
| 3 | 659_b6o-T1-TRNA-1_B23MHV2LT4_1 | TAGCGAGGCT | TTGCTCACGG | 2 | 0 | 16708150 | 0.000 |
| 3 | 659_cAa-T1-TRNA-1_B23MHV2LT4_1 | CCAACTGTAT | GCGCTAGAGA | 1 | 0 | 12673128 | 0.000 |
| 3 | 659_cAa-T1-TRNA-1_B23MHV2LT4_1 | CCAACTGTAT | GCGCTAGAGA | 2 | 0 | 12673128 | 0.000 |
| 3 | 659_Kh-T1-TRNA-1_B23MHV2LT4_1 | GAGTAGTGAC | GCGATGCCAA | 1 | 0 | 128332182 | 0.000 |
| 3 | 659_Kh-T1-TRNA-1_B23MHV2LT4_1 | GAGTAGTGAC | GCGATGCCAA | 2 | 0 | 128332182 | 0.000 |
| 3 | 659_c95-T1-TRNA-1_B23MHV2LT4_1 | CCAGTATTCT | ACGAAGCGAT | 1 | 0 | 16914162320 | 0.000 |
| 3 | 659_c95-T1-TRNA-1_B23MHV2LT4_1 | CCAGTATTCT | ACGAAGCGAT | 2 | 0 | 16914162320 | 0.000 |
| 3 | 659_ciJ-T1-TRNA-1_B23MHV2LT4_1 | ATCATACCGC | ATGTCGTACT | 1 | 0 | 14665324454 | 0.000 |
| 3 | 659_ciJ-T1-TRNA-1_B23MHV2LT4_1 | ATCATACCGC | ATGTCGTACT | 2 | 0 | 14665324454 | 0.000 |
| 3 | 659_bhK-T1-TRNA-1_B23MHV2LT4_1 | ATTCGCACTA | TCTGTATGGT | 1 | 0 | 18971974918 | 0.000 |
| 3 | 659_bhK-T1-TRNA-1_B23MHV2LT4_1 | ATTCGCACTA | TCTGTATGGT | 2 | 0 | 18971974918 | 0.000 |
| 3 | 659_Lx-T1-TRNA-1_B23MHV2LT4_1 | CTCTTCAGCA | TTGTCTCTAC | 1 | 0 | 10239066286 | 0.000 |
| 3 | 659_Lx-T1-TRNA-1_B23MHV2LT4_1 | CTCTTCAGCA | TTGTCTCTAC | 2 | 0 | 10239066286 | 0.000 |
| 3 | 659_bUW-T1-TRNA-1_B23MHV2LT4_1 | CTGTATGCCA | TTCCGGCTGT | 1 | 0 | 29033992194 | 0.000 |
| 3 | 659_bUW-T1-TRNA-1_B23MHV2LT4_1 | CTGTATGCCA | TTCCGGCTGT | 2 | 0 | 29033992194 | 0.000 |
| 3 | 659_mK-T1-TRNA-2_B23MHV2LT4_1 | TCTGACTATG | TAACCAGATC | 1 | 0 | 10676530349 | 0.000 |
| 3 | 659_mK-T1-TRNA-2_B23MHV2LT4_1 | TCTGACTATG | TAACCAGATC | 2 | 0 | 10676530349 | 0.000 |
| 3 | 659_dwi-T1-TRNA-1_B23MHV2LT4_1 | TGTGACGTAT | GCAGCGTTAG | 1 | 0 | 20771862 | 0.000 |
| 3 | 659_dwi-T1-TRNA-1_B23MHV2LT4_1 | TGTGACGTAT | GCAGCGTTAG | 2 | 0 | 20771862 | 0.000 |
| 3 | NTC_0001_0001_B23MHV2LT4_1 | AGAAGATTGG | AGAAGGTACT | 1 | 0 | 6853890 | 0.000 |
| 3 | NTC_0001_0001_B23MHV2LT4_1 | AGAAGATTGG | AGAAGGTACT | 2 | 0 | 6853890 | 0.000 |
| 3 | 659_d01-T1-TRNA-1_B23MHV2LT4_1 | ATCCAGCATG | AGAGCTCTAC | 1 | 0 | 12788592717 | 0.000 |
| 3 | 659_d01-T1-TRNA-1_B23MHV2LT4_1 | ATCCAGCATG | AGAGCTCTAC | 2 | 0 | 12788592717 | 0.000 |
| 3 | 659_bNS-T1-TRNA-1_B23MHV2LT4_1 | GCGCCATATA | GAACCTCCTA | 1 | 0 | 15059597987 | 0.000 |
| 3 | 659_bNS-T1-TRNA-1_B23MHV2LT4_1 | GCGCCATATA | GAACCTCCTA | 2 | 0 | 15059597987 | 0.000 |
| 3 | 659_bR4-T1-TRNA-1_B23MHV2LT4_1 | CACTCGCATA | GAACGCGACA | 1 | 0 | 11140588683 | 0.000 |
| 3 | 659_bR4-T1-TRNA-1_B23MHV2LT4_1 | CACTCGCATA | GAACGCGACA | 2 | 0 | 11140588683 | 0.000 |
| 3 | 659_buD-T1-TRNA-1_B23MHV2LT4_1 | AAGGTCAATG | GCATTATAGG | 1 | 0 | 15225277603 | 0.000 |
| 3 | 659_buD-T1-TRNA-1_B23MHV2LT4_1 | AAGGTCAATG | GCATTATAGG | 2 | 0 | 15225277603 | 0.000 |
| 3 | 659_cYf-T1-TRNA-1_B23MHV2LT4_1 | GTGACGCACA | CGTTGTTGCG | 1 | 0 | 16413770215 | 0.000 |
| 3 | 659_cYf-T1-TRNA-1_B23MHV2LT4_1 | GTGACGCACA | CGTTGTTGCG | 2 | 0 | 16413770215 | 0.000 |
| 3 | 659_R1-T1-TRNA-1_B23MHV2LT4_1 | TGTCAGGCTT | GATTCCTTAC | 1 | 0 | 19046536 | 0.000 |
| 3 | 659_R1-T1-TRNA-1_B23MHV2LT4_1 | TGTCAGGCTT | GATTCCTTAC | 2 | 0 | 19046536 | 0.000 |
| 3 | 659_eGK-T1-TRNA-1_B23MHV2LT4_1 | CACGTGATGG | TACAACGTGT | 1 | 0 | 15767455183 | 0.000 |
| 3 | 659_eGK-T1-TRNA-1_B23MHV2LT4_1 | CACGTGATGG | TACAACGTGT | 2 | 0 | 15767455183 | 0.000 |
| 3 | 659_On-T1-TRNA-2_B23MHV2LT4_1 | CCATCACGTG | TCTCCTGGTT | 1 | 0 | 12668343716 | 0.000 |
| 3 | 659_On-T1-TRNA-2_B23MHV2LT4_1 | CCATCACGTG | TCTCCTGGTT | 2 | 0 | 12668343716 | 0.000 |
| 3 | 659_d0V-T1-TRNA-1_B23MHV2LT4_1 | ACCAGGAATT | AGCATGGCAT | 1 | 0 | 13906798 | 0.000 |
| 3 | 659_d0V-T1-TRNA-1_B23MHV2LT4_1 | ACCAGGAATT | AGCATGGCAT | 2 | 0 | 13906798 | 0.000 |
| 3 | 659_8h-T1-TRNA-1_B23MHV2LT4_1 | TAAGGCTCAC | GACGTTACTT | 1 | 0 | 10916092 | 0.000 |
| 3 | 659_8h-T1-TRNA-1_B23MHV2LT4_1 | TAAGGCTCAC | GACGTTACTT | 2 | 0 | 10916092 | 0.000 |
| 3 | 659_Dl-T1-TRNA-1_B23MHV2LT4_1 | TGGCACTGAT | GCCATAGAAT | 1 | 0 | 7779412488 | 0.000 |
| 3 | 659_Dl-T1-TRNA-1_B23MHV2LT4_1 | TGGCACTGAT | GCCATAGAAT | 2 | 0 | 7779412488 | 0.000 |
| 3 | 659_eKx-T1-TRNA-1_B23MHV2LT4_1 | CATATGGTGC | ACAGATCTCA | 1 | 0 | 15076897 | 0.000 |
| 3 | 659_eKx-T1-TRNA-1_B23MHV2LT4_1 | CATATGGTGC | ACAGATCTCA | 2 | 0 | 15076897 | 0.000 |
| 3 | 659_dES-T1-TRNA-1_B23MHV2LT4_1 | GCACTACCAG | GAAGACTTAG | 1 | 0 | 11757610923 | 0.000 |
| 3 | 659_dES-T1-TRNA-1_B23MHV2LT4_1 | GCACTACCAG | GAAGACTTAG | 2 | 0 | 11757610923 | 0.000 |
| 3 | 659_ri-T1-TRNA-1_B23MHV2LT4_1 | GCATAAGATC | GAGAACTGGA | 1 | 0 | 6325893434 | 0.000 |
| 3 | 659_ri-T1-TRNA-1_B23MHV2LT4_1 | GCATAAGATC | GAGAACTGGA | 2 | 0 | 6325893434 | 0.000 |
| 3 | 659_1q-T1-TRNA-1_B23MHV2LT4_1 | AAGGTGTACT | AGCGCTACAG | 1 | 0 | 19649276358 | 0.000 |
| 3 | 659_1q-T1-TRNA-1_B23MHV2LT4_1 | AAGGTGTACT | AGCGCTACAG | 2 | 0 | 19649276358 | 0.000 |
| 3 | 659_ecd-T1-TRNA-1_B23MHV2LT4_1 | CTTCTAACCG | TGATCAGTCT | 1 | 0 | 17822688701 | 0.000 |
| 3 | 659_ecd-T1-TRNA-1_B23MHV2LT4_1 | CTTCTAACCG | TGATCAGTCT | 2 | 0 | 17822688701 | 0.000 |
| 3 | 659_Dd-T1-TRNA-1_B23MHV2LT4_1 | TCGACCAGCA | GTTCGAACTC | 1 | 0 | 23475069134 | 0.000 |
| 3 | 659_Dd-T1-TRNA-1_B23MHV2LT4_1 | TCGACCAGCA | GTTCGAACTC | 2 | 0 | 23475069134 | 0.000 |
| 3 | 659_cfy-T1-TRNA-1_B23MHV2LT4_1 | GTGACACGTC | CTTACACTGA | 1 | 0 | 16887400892 | 0.000 |
| 3 | 659_cfy-T1-TRNA-1_B23MHV2LT4_1 | GTGACACGTC | CTTACACTGA | 2 | 0 | 16887400892 | 0.000 |
| 3 | 659_bjQ-T1-TRNA-1_B23MHV2LT4_1 | AATGGACGCG | AAGTGCACCG | 1 | 0 | 13324906967 | 0.000 |
| 3 | 659_bjQ-T1-TRNA-1_B23MHV2LT4_1 | AATGGACGCG | AAGTGCACCG | 2 | 0 | 13324906967 | 0.000 |
| 3 | 659_bGc-T1-TRNA-1_B23MHV2LT4_1 | TCTCCGTACT | AGTTGTGATC | 1 | 0 | 12810306970 | 0.000 |
| 3 | 659_bGc-T1-TRNA-1_B23MHV2LT4_1 | TCTCCGTACT | AGTTGTGATC | 2 | 0 | 12810306970 | 0.000 |
| 3 | 659_dts-T1-TRNA-1_B23MHV2LT4_1 | TGGAAGCACA | TCCAACACCG | 1 | 0 | 13265802698 | 0.000 |
| 3 | 659_dts-T1-TRNA-1_B23MHV2LT4_1 | TGGAAGCACA | TCCAACACCG | 2 | 0 | 13265802698 | 0.000 |
| 3 | FFPE_HD789_02_RNA_0014_B23MHV2LT4_1 | GATAGACAAC | GTGTTCACGT | 1 | 0 | 14697962198 | 0.000 |
| 3 | FFPE_HD789_02_RNA_0014_B23MHV2LT4_1 | GATAGACAAC | GTGTTCACGT | 2 | 0 | 14697962198 | 0.000 |
| 3 | 659_wQ-T1-TRNA-1_B23MHV2LT4_1 | AGCGTCTCAT | CCTAGGCGAT | 1 | 0 | 13247410747 | 0.000 |
| 3 | 659_wQ-T1-TRNA-1_B23MHV2LT4_1 | AGCGTCTCAT | CCTAGGCGAT | 2 | 0 | 13247410747 | 0.000 |
| 3 | 659_cB6-T1-TRNA-1_B23MHV2LT4_1 | CTCTATACTG | CGTTCAACCG | 1 | 0 | 11285320824 | 0.000 |
| 3 | 659_cB6-T1-TRNA-1_B23MHV2LT4_1 | CTCTATACTG | CGTTCAACCG | 2 | 0 | 11285320824 | 0.000 |
| 3 | 659_cRa-T1-TRNA-1_B23MHV2LT4_1 | ATAGCCGGTT | TCTTATCCGG | 1 | 0 | 20188839373 | 0.000 |
| 3 | 659_cRa-T1-TRNA-1_B23MHV2LT4_1 | ATAGCCGGTT | TCTTATCCGG | 2 | 0 | 20188839373 | 0.000 |
| 3 | 659_cTi-T1-TRNA-1_B23MHV2LT4_1 | GTTCTCATCA | CCTCCATTCT | 1 | 0 | 17964553956 | 0.000 |
| 3 | 659_cTi-T1-TRNA-1_B23MHV2LT4_1 | GTTCTCATCA | CCTCCATTCT | 2 | 0 | 17964553956 | 0.000 |
| 3 | 659_d0M-T1-TRNA-1_B23MHV2LT4_1 | CAATGCGTGT | ATGTTCGCGC | 1 | 0 | 15162665 | 0.000 |
| 3 | 659_d0M-T1-TRNA-1_B23MHV2LT4_1 | CAATGCGTGT | ATGTTCGCGC | 2 | 0 | 15162665 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_1 | TGAGTGTACA | ATTCGCCGGT | 1 | 0 | 18993879129 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_1 | TGAGTGTACA | ATTCGCCGGT | 2 | 0 | 18993879129 | 0.000 |
| 3 | 659_cq5-T1-TRNA-1_B23MHV2LT4_1 | TGCTTCCAAG | CAGATGTTAC | 1 | 0 | 11079625 | 0.000 |
| 3 | 659_cq5-T1-TRNA-1_B23MHV2LT4_1 | TGCTTCCAAG | CAGATGTTAC | 2 | 0 | 11079625 | 0.000 |
| 3 | 659_bTq-T1-TRNA-1_B23MHV2LT4_1 | CCTACTCTGC | TGCAATTGGC | 1 | 0 | 20731851530 | 0.000 |
| 3 | 659_bTq-T1-TRNA-1_B23MHV2LT4_1 | CCTACTCTGC | TGCAATTGGC | 2 | 0 | 20731851530 | 0.000 |
| 3 | 659_cwv-T1-TRNA-1_B23MHV2LT4_1 | TCGCTGAGAG | AATGCTCTAG | 1 | 0 | 20351274905 | 0.000 |
| 3 | 659_cwv-T1-TRNA-1_B23MHV2LT4_1 | TCGCTGAGAG | AATGCTCTAG | 2 | 0 | 20351274905 | 0.000 |
| 3 | 659_bGW-T1-TRNA-1_B23MHV2LT4_1 | CGCTAATTGC | CCATCGCATT | 1 | 0 | 17597948455 | 0.000 |
| 3 | 659_bGW-T1-TRNA-1_B23MHV2LT4_1 | CGCTAATTGC | CCATCGCATT | 2 | 0 | 17597948455 | 0.000 |
| 3 | 659_dXa-T1-TRNA-1_B23MHV2LT4_1 | TCAGCTGTCA | ACAGCTCCTG | 1 | 0 | 13520955401 | 0.000 |
| 3 | 659_dXa-T1-TRNA-1_B23MHV2LT4_1 | TCAGCTGTCA | ACAGCTCCTG | 2 | 0 | 13520955401 | 0.000 |
| 3 | 659_dkd-T1-TRNA-1_B23MHV2LT4_1 | AGACGACAGA | GAGCTGGAAT | 1 | 0 | 6982844 | 0.000 |
| 3 | 659_dkd-T1-TRNA-1_B23MHV2LT4_1 | AGACGACAGA | GAGCTGGAAT | 2 | 0 | 6982844 | 0.000 |
| 3 | 659_eZ4-T1-TRNA-1_B23MHV2LT4_1 | TAGGTCCAGA | TGCTCATCCG | 1 | 0 | 10539187242 | 0.000 |
| 3 | 659_eZ4-T1-TRNA-1_B23MHV2LT4_1 | TAGGTCCAGA | TGCTCATCCG | 2 | 0 | 10539187242 | 0.000 |
| 3 | 659_eu1-T1-TRNA-1_B23MHV2LT4_1 | TAACCTGAAC | TCAATTGACG | 1 | 0 | 5183042384 | 0.000 |
| 3 | 659_eu1-T1-TRNA-1_B23MHV2LT4_1 | TAACCTGAAC | TCAATTGACG | 2 | 0 | 5183042384 | 0.000 |
| 3 | 659_dfA-T1-TRNA-1_B23MHV2LT4_1 | GATAGGTGAA | AGACGCAAGA | 1 | 0 | 19040576785 | 0.000 |
| 3 | 659_dfA-T1-TRNA-1_B23MHV2LT4_1 | GATAGGTGAA | AGACGCAAGA | 2 | 0 | 19040576785 | 0.000 |
| 3 | Undetermined | 1 | 0 | 41051446786 | 0.000 | ||
| 3 | Undetermined | 2 | 0 | 41051446786 | 0.000 |
99 rows