File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__3b7a596a--20260604-122713/bclconvert/L007/Reports/Quality_Metrics.csv
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- 9.9 KB
- Workflow Run
- dev_rna_exp09_10-3b7a596a
- Published
- Jun 04, 2026 1:06 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 7 | 659_Fr-T1-TRNA-1_B23MHV2LT4_1 | CAACCATACA | ACCGGTTATA | 1 | 14880550039 | 14191612810 | 580409036167 | 39.00 | 0.95 |
| 7 | 659_Fr-T1-TRNA-1_B23MHV2LT4_1 | CAACCATACA | ACCGGTTATA | 2 | 14880550039 | 14022195231 | 577296341157 | 38.80 | 0.94 |
| 7 | 659_bQZ-T1-TRNA-1_B23MHV2LT4_1 | GTAGGCCGTT | GCCACTGTCT | 1 | 16193587451 | 15496399213 | 633219395737 | 39.10 | 0.96 |
| 7 | 659_bQZ-T1-TRNA-1_B23MHV2LT4_1 | GTAGGCCGTT | GCCACTGTCT | 2 | 16193587451 | 15315908621 | 629436026390 | 38.87 | 0.95 |
| 7 | 659_ezg-T1-TRNA-1_B23MHV2LT4_1 | CGGATTGATC | AGTCACAACA | 1 | 15942268789 | 15220522834 | 622528598902 | 39.05 | 0.95 |
| 7 | 659_ezg-T1-TRNA-1_B23MHV2LT4_1 | CGGATTGATC | AGTCACAACA | 2 | 15942268789 | 15086452532 | 619773664547 | 38.88 | 0.95 |
| 7 | 659_dRe-T1-TRNA-1_B23MHV2LT4_1 | ACTGGCAAGA | TGTTGTCCAT | 1 | 10472523158 | 9997771845 | 408740747139 | 39.03 | 0.95 |
| 7 | 659_dRe-T1-TRNA-1_B23MHV2LT4_1 | ACTGGCAAGA | TGTTGTCCAT | 2 | 10472523158 | 9911985127 | 407239515184 | 38.89 | 0.95 |
| 7 | 659_b7Z-T1-TRNA-1_B23MHV2LT4_1 | ACAAGAACCT | CGATACTGAA | 1 | 19778644098 | 19012997364 | 775219676214 | 39.19 | 0.96 |
| 7 | 659_b7Z-T1-TRNA-1_B23MHV2LT4_1 | ACAAGAACCT | CGATACTGAA | 2 | 19778644098 | 18740065743 | 769372425120 | 38.90 | 0.95 |
| 7 | 659_dQk-T1-TRNA-1_B23MHV2LT4_1 | AGAGTATGTG | AGATGGCTTC | 1 | 13381469 | 8524150 | 428414395 | 32.02 | 0.64 |
| 7 | 659_dQk-T1-TRNA-1_B23MHV2LT4_1 | AGAGTATGTG | AGATGGCTTC | 2 | 13381469 | 9472543 | 459144646 | 34.31 | 0.71 |
| 7 | 659_SP-T1-TRNA-1_B23MHV2LT4_1 | ACTTAGATCG | CGGAATTCTT | 1 | 15244442523 | 14433464365 | 592162656361 | 38.84 | 0.95 |
| 7 | 659_SP-T1-TRNA-1_B23MHV2LT4_1 | ACTTAGATCG | CGGAATTCTT | 2 | 15244442523 | 14376977988 | 591616501644 | 38.81 | 0.94 |
| 7 | 659_bTo-T1-TRNA-1_B23MHV2LT4_1 | GATCAACAAG | AAGCACTGTC | 1 | 13036421165 | 12414914861 | 508203731588 | 38.98 | 0.95 |
| 7 | 659_bTo-T1-TRNA-1_B23MHV2LT4_1 | GATCAACAAG | AAGCACTGTC | 2 | 13036421165 | 12280654035 | 505592034846 | 38.78 | 0.94 |
| 7 | 659_dHy-T1-TRNA-1_B23MHV2LT4_1 | ACCTTCGGAC | GACCGTAGAT | 1 | 13339545662 | 12854484589 | 523847051566 | 39.27 | 0.96 |
| 7 | 659_dHy-T1-TRNA-1_B23MHV2LT4_1 | ACCTTCGGAC | GACCGTAGAT | 2 | 13339545662 | 12638901916 | 518946906997 | 38.90 | 0.95 |
| 7 | FFPE_HD789_02_RNA_0015_B23MHV2LT4_1 | TATCATGTCG | TAATCTGCAC | 1 | 28990266973 | 28009137965 | 1139559893477 | 39.31 | 0.97 |
| 7 | FFPE_HD789_02_RNA_0015_B23MHV2LT4_1 | TATCATGTCG | TAATCTGCAC | 2 | 28990266973 | 27496318076 | 1128512866994 | 38.93 | 0.95 |
| 7 | 659_Mt-T1-TRNA-1_B23MHV2LT4_1 | CGTCTAGTAA | TTAATCCAGC | 1 | 11622233987 | 10999470413 | 451269951206 | 38.83 | 0.95 |
| 7 | 659_Mt-T1-TRNA-1_B23MHV2LT4_1 | CGTCTAGTAA | TTAATCCAGC | 2 | 11622233987 | 10963339367 | 451125951158 | 38.82 | 0.94 |
| 7 | 659_epZ-T1-TRNA-1_B23MHV2LT4_1 | TCTTAGGTGG | GATCACTGGT | 1 | 20060719497 | 18999027633 | 779642219745 | 38.86 | 0.95 |
| 7 | 659_epZ-T1-TRNA-1_B23MHV2LT4_1 | TCTTAGGTGG | GATCACTGGT | 2 | 20060719497 | 18735613593 | 774457645992 | 38.61 | 0.93 |
| 7 | 659_djb-T1-TRNA-1_B23MHV2LT4_1 | TCGACGTTGG | GATAAGTGTG | 1 | 12205084625 | 11529157021 | 473518647325 | 38.80 | 0.94 |
| 7 | 659_djb-T1-TRNA-1_B23MHV2LT4_1 | TCGACGTTGG | GATAAGTGTG | 2 | 12205084625 | 11428123914 | 471778221063 | 38.65 | 0.94 |
| 7 | 659_end-T1-TRNA-1_B23MHV2LT4_1 | AAGAGTACGA | GCAAGGACGT | 1 | 15668370644 | 14982258038 | 612146917286 | 39.07 | 0.96 |
| 7 | 659_end-T1-TRNA-1_B23MHV2LT4_1 | AAGAGTACGA | GCAAGGACGT | 2 | 15668370644 | 14852594264 | 609769968389 | 38.92 | 0.95 |
| 7 | 659_bKP-T1-TRNA-1_B23MHV2LT4_1 | CACGAGAAGT | GTCTGCGTAG | 1 | 11895937644 | 11310026710 | 463466762956 | 38.96 | 0.95 |
| 7 | 659_bKP-T1-TRNA-1_B23MHV2LT4_1 | CACGAGAAGT | GTCTGCGTAG | 2 | 11895937644 | 11201456347 | 461177382019 | 38.77 | 0.94 |
| 7 | 659_gK-T1-TRNA-1_B23MHV2LT4_1 | GACAATTAGC | CCGGTCATGA | 1 | 11341185237 | 10861637948 | 443507985794 | 39.11 | 0.96 |
| 7 | 659_gK-T1-TRNA-1_B23MHV2LT4_1 | GACAATTAGC | CCGGTCATGA | 2 | 11341185237 | 10736073416 | 441034998374 | 38.89 | 0.95 |
| 7 | 659_cuO-T1-TRNA-1_B23MHV2LT4_1 | TTCTACCGGC | TACTCGTAAG | 1 | 7277445 | 4921041 | 239028150 | 32.85 | 0.68 |
| 7 | 659_cuO-T1-TRNA-1_B23MHV2LT4_1 | TTCTACCGGC | TACTCGTAAG | 2 | 7277445 | 5161212 | 249975450 | 34.35 | 0.71 |
| 7 | 659_eHw-T1-TRNA-1_B23MHV2LT4_1 | GTGAGAGTAT | ATCTGTGAGG | 1 | 34398563758 | 33144386726 | 1350882369050 | 39.27 | 0.96 |
| 7 | 659_eHw-T1-TRNA-1_B23MHV2LT4_1 | GTGAGAGTAT | ATCTGTGAGG | 2 | 34398563758 | 32432517429 | 1334774827023 | 38.80 | 0.94 |
| 7 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_2 | CTGGAGAATA | TCCATACAAC | 1 | 20921441392 | 20059535348 | 818924620202 | 39.14 | 0.96 |
| 7 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_2 | CTGGAGAATA | TCCATACAAC | 2 | 20921441392 | 19831233623 | 814118466110 | 38.91 | 0.95 |
| 7 | 659_rd-T1-TRNA-1_B23MHV2LT4_1 | TGACAAGAGG | AATCTGTTGG | 1 | 8056587937 | 7737773944 | 315576245464 | 39.17 | 0.96 |
| 7 | 659_rd-T1-TRNA-1_B23MHV2LT4_1 | TGACAAGAGG | AATCTGTTGG | 2 | 8056587937 | 7660502083 | 314044182829 | 38.98 | 0.95 |
| 7 | 659_epP-T1-TRNA-1_B23MHV2LT4_1 | TGTTCGCTCT | ACTTGCGTGT | 1 | 19621784694 | 18931180879 | 770975057152 | 39.29 | 0.96 |
| 7 | 659_epP-T1-TRNA-1_B23MHV2LT4_1 | TGTTCGCTCT | ACTTGCGTGT | 2 | 19621784694 | 18575368079 | 762976736051 | 38.88 | 0.95 |
| 7 | 659_ciZ-T1-TRNA-1_B23MHV2LT4_1 | AGGTATTCGG | AGATGTGCGC | 1 | 10808263655 | 10239746621 | 419984167931 | 38.86 | 0.95 |
| 7 | 659_ciZ-T1-TRNA-1_B23MHV2LT4_1 | AGGTATTCGG | AGATGTGCGC | 2 | 10808263655 | 10162099445 | 418873653557 | 38.75 | 0.94 |
| 7 | 659_dKM-T1-TRNA-1_B23MHV2LT4_1 | ACGGCCTACA | TCTCACTCTA | 1 | 12521865411 | 11878018708 | 486943601263 | 38.89 | 0.95 |
| 7 | 659_dKM-T1-TRNA-1_B23MHV2LT4_1 | ACGGCCTACA | TCTCACTCTA | 2 | 12521865411 | 11828950491 | 486369444246 | 38.84 | 0.94 |
| 7 | 659_eeB-T1-TRNA-1_B23MHV2LT4_1 | CACGTAAGAG | TCAATCCGCG | 1 | 7771517 | 4888357 | 247394680 | 31.83 | 0.63 |
| 7 | 659_eeB-T1-TRNA-1_B23MHV2LT4_1 | CACGTAAGAG | TCAATCCGCG | 2 | 7771517 | 5540065 | 268285510 | 34.52 | 0.71 |
| 7 | 659_buj-T1-TRNA-1_B23MHV2LT4_1 | AATCGAACTC | ACGAACCTTA | 1 | 12076678 | 7722042 | 386717352 | 32.02 | 0.64 |
| 7 | 659_buj-T1-TRNA-1_B23MHV2LT4_1 | AATCGAACTC | ACGAACCTTA | 2 | 12076678 | 7643860 | 393530758 | 32.59 | 0.63 |
| 7 | 659_cGW-T1-TRNA-1_B23MHV2LT4_1 | AGGCTGGAGA | CAACTGTCAT | 1 | 3653087130 | 3451633913 | 141780203780 | 38.81 | 0.94 |
| 7 | 659_cGW-T1-TRNA-1_B23MHV2LT4_1 | AGGCTGGAGA | CAACTGTCAT | 2 | 3653087130 | 3415534545 | 141093644802 | 38.62 | 0.93 |
| 7 | 659_cAd-T1-TRNA-1_B23MHV2LT4_1 | TAAGCCACGC | TTACGAACGA | 1 | 11304390614 | 10700085390 | 439435409223 | 38.87 | 0.95 |
| 7 | 659_cAd-T1-TRNA-1_B23MHV2LT4_1 | TAAGCCACGC | TTACGAACGA | 2 | 11304390614 | 10627744334 | 438001915589 | 38.75 | 0.94 |
| 7 | 659_cRB-T1-TRNA-1_B23MHV2LT4_1 | TCAATCAGAG | GACTCTGGTT | 1 | 7204797390 | 6761039828 | 278381960972 | 38.64 | 0.94 |
| 7 | 659_cRB-T1-TRNA-1_B23MHV2LT4_1 | TCAATCAGAG | GACTCTGGTT | 2 | 7204797390 | 6774456001 | 279225103252 | 38.76 | 0.94 |
| 7 | 659_bIB-T1-TRNA-1_B23MHV2LT4_1 | AACATAAGGC | GTTAGCTTAG | 1 | 14162410196 | 13614384715 | 555197415466 | 39.20 | 0.96 |
| 7 | 659_bIB-T1-TRNA-1_B23MHV2LT4_1 | AACATAAGGC | GTTAGCTTAG | 2 | 14162410196 | 13417795667 | 550982015945 | 38.90 | 0.95 |
| 7 | 659_zO-T1-TRNA-1_B23MHV2LT4_1 | TTGCAATGCG | CGAGACTTCA | 1 | 13491815119 | 12843261352 | 525881149954 | 38.98 | 0.95 |
| 7 | 659_zO-T1-TRNA-1_B23MHV2LT4_1 | TTGCAATGCG | CGAGACTTCA | 2 | 13491815119 | 12734615171 | 523851099449 | 38.83 | 0.94 |
| 7 | 659_dcz-T1-TRNA-1_B23MHV2LT4_1 | AACCGGCCTT | TGTTCAGATC | 1 | 6148872208 | 5669091691 | 235331636134 | 38.27 | 0.92 |
| 7 | 659_dcz-T1-TRNA-1_B23MHV2LT4_1 | AACCGGCCTT | TGTTCAGATC | 2 | 6148872208 | 5722254217 | 236992465843 | 38.54 | 0.93 |
| 7 | 659_bUs-T1-TRNA-1_B23MHV2LT4_1 | CATTATCGCT | CGAGTTGCTT | 1 | 18154997874 | 17498574819 | 712658480631 | 39.25 | 0.96 |
| 7 | 659_bUs-T1-TRNA-1_B23MHV2LT4_1 | CATTATCGCT | CGAGTTGCTT | 2 | 18154997874 | 17241224711 | 707137457420 | 38.95 | 0.95 |
| 7 | 659_bMa-T1-TRNA-1_B23MHV2LT4_1 | CATTGAGCTA | ACTTCACATC | 1 | 6239690101 | 5785156847 | 239452477889 | 38.38 | 0.93 |
| 7 | 659_bMa-T1-TRNA-1_B23MHV2LT4_1 | CATTGAGCTA | ACTTCACATC | 2 | 6239690101 | 5814547851 | 240630593610 | 38.56 | 0.93 |
| 7 | 659_b4x-T1-TRNA-1_B23MHV2LT4_1 | CTTCGGAATC | CGTCGGTAAG | 1 | 2749131368 | 2524812088 | 104989516726 | 38.19 | 0.92 |
| 7 | 659_b4x-T1-TRNA-1_B23MHV2LT4_1 | CTTCGGAATC | CGTCGGTAAG | 2 | 2749131368 | 2542792472 | 105556938806 | 38.40 | 0.92 |
| 7 | 659_dc8-T1-TRNA-1_B23MHV2LT4_1 | AACCACACTA | CCTCTGCTGA | 1 | 18030098073 | 17219988557 | 703867051022 | 39.04 | 0.96 |
| 7 | 659_dc8-T1-TRNA-1_B23MHV2LT4_1 | AACCACACTA | CCTCTGCTGA | 2 | 18030098073 | 17057800133 | 700852641995 | 38.87 | 0.95 |
| 7 | 659_cWx-T1-TRNA-1_B23MHV2LT4_1 | GTACAGCGGA | CAATCTGTGT | 1 | 13855978497 | 13236165446 | 541035746180 | 39.05 | 0.96 |
| 7 | 659_cWx-T1-TRNA-1_B23MHV2LT4_1 | GTACAGCGGA | CAATCTGTGT | 2 | 13855978497 | 13057063812 | 537491482050 | 38.79 | 0.94 |
| 7 | 659_cVw-T1-TRNA-1_B23MHV2LT4_1 | ACTTCAACAG | GCGTGAGCAT | 1 | 18911305081 | 18204993660 | 741875766615 | 39.23 | 0.96 |
| 7 | 659_cVw-T1-TRNA-1_B23MHV2LT4_1 | ACTTCAACAG | GCGTGAGCAT | 2 | 18911305081 | 17929150967 | 736005407195 | 38.92 | 0.95 |
| 7 | 659_dm4-T1-TRNA-1_B23MHV2LT4_1 | TGGACAATAG | GAGTCCTGTG | 1 | 7232296906 | 6747853562 | 278653905929 | 38.53 | 0.93 |
| 7 | 659_dm4-T1-TRNA-1_B23MHV2LT4_1 | TGGACAATAG | GAGTCCTGTG | 2 | 7232296906 | 6787964017 | 279984217399 | 38.71 | 0.94 |
| 7 | 659_epG-T1-TRNA-1_B23MHV2LT4_1 | TCACACGGAT | CTTCTGATCG | 1 | 15410246261 | 14725028387 | 602117740925 | 39.07 | 0.96 |
| 7 | 659_epG-T1-TRNA-1_B23MHV2LT4_1 | TCACACGGAT | CTTCTGATCG | 2 | 15410246261 | 14567380590 | 598764842889 | 38.85 | 0.95 |
| 7 | 659_6i-T1-TRNA-1_B23MHV2LT4_1 | AGGATACGGT | AACCACGTCA | 1 | 8228585846 | 7711277710 | 318069399661 | 38.65 | 0.94 |
| 7 | 659_6i-T1-TRNA-1_B23MHV2LT4_1 | AGGATACGGT | AACCACGTCA | 2 | 8228585846 | 7694804242 | 317920672405 | 38.64 | 0.94 |
| 7 | 659_e0S-T1-TRNA-1_B23MHV2LT4_1 | GCTACAGGTC | TTATGCAGGA | 1 | 8846033 | 5902369 | 288945457 | 32.66 | 0.67 |
| 7 | 659_e0S-T1-TRNA-1_B23MHV2LT4_1 | GCTACAGGTC | TTATGCAGGA | 2 | 8846033 | 6397356 | 307131489 | 34.72 | 0.72 |
| 7 | 659_egp-T1-TRNA-1_B23MHV2LT4_1 | GCCAAGTAAC | TGCGTGATGA | 1 | 7466346 | 4963390 | 243393589 | 32.60 | 0.66 |
| 7 | 659_egp-T1-TRNA-1_B23MHV2LT4_1 | GCCAAGTAAC | TGCGTGATGA | 2 | 7466346 | 5413682 | 259421267 | 34.75 | 0.73 |
| 7 | 659_bCu-T1-TRNA-1_B23MHV2LT4_1 | TTGTGAAGGC | TCGTCAGTAC | 1 | 9788850575 | 9179923880 | 378497848526 | 38.67 | 0.94 |
| 7 | 659_bCu-T1-TRNA-1_B23MHV2LT4_1 | TTGTGAAGGC | TCGTCAGTAC | 2 | 9788850575 | 9121294857 | 377419566933 | 38.56 | 0.93 |
| 7 | 659_cIX-T1-TRNA-1_B23MHV2LT4_1 | GTCGACTCCT | TGCCGTTAGC | 1 | 16658342952 | 15886166941 | 650134699870 | 39.03 | 0.95 |
| 7 | 659_cIX-T1-TRNA-1_B23MHV2LT4_1 | GTCGACTCCT | TGCCGTTAGC | 2 | 16658342952 | 15699325503 | 646187098422 | 38.79 | 0.94 |
| 7 | 659_bua-T1-TRNA-1_B23MHV2LT4_1 | CTGAGCTTGT | CTTCTTGCGT | 1 | 17918314434 | 17122302642 | 700508636568 | 39.09 | 0.96 |
| 7 | 659_bua-T1-TRNA-1_B23MHV2LT4_1 | CTGAGCTTGT | CTTCTTGCGT | 2 | 17918314434 | 16919917412 | 695867597609 | 38.84 | 0.94 |
| 7 | 659_ePR-T1-TRNA-1_B23MHV2LT4_1 | CCTCTGTCAT | CGTATCGATT | 1 | 16810341213 | 16124557393 | 658417637839 | 39.17 | 0.96 |
| 7 | 659_ePR-T1-TRNA-1_B23MHV2LT4_1 | CCTCTGTCAT | CGTATCGATT | 2 | 16810341213 | 15882518569 | 652931893093 | 38.84 | 0.94 |
| 7 | 659_Wm-T1-TRNA-1_B23MHV2LT4_1 | GCAGATGTAA | TACACGCCTC | 1 | 13737074 | 8732299 | 439428556 | 31.99 | 0.64 |
| 7 | 659_Wm-T1-TRNA-1_B23MHV2LT4_1 | GCAGATGTAA | TACACGCCTC | 2 | 13737074 | 8896579 | 455207233 | 33.14 | 0.65 |
| 7 | NTC_0001_0001_B23MHV2LT4_2 | CTCATCATCT | TAAGCCTCTA | 1 | 9796729 | 6456612 | 318071022 | 32.47 | 0.66 |
| 7 | NTC_0001_0001_B23MHV2LT4_2 | CTCATCATCT | TAAGCCTCTA | 2 | 9796729 | 6696832 | 332092642 | 33.90 | 0.68 |
| 7 | Undetermined | 1 | 40109474358 | 32482567816 | 1430693900179 | 35.67 | 0.81 | ||
| 7 | Undetermined | 2 | 40109474358 | 31305449858 | 1396201580633 | 34.81 | 0.78 |
99 rows