FastQCFastQC Report
Thu 4 Jun 2026
659_cq5-T1-TRNA-1_B23MHV2LT4_1_trimmed_2.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename659_cq5-T1-TRNA-1_B23MHV2LT4_1_trimmed_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34213
Total Bases1.7 Mbp
Sequences flagged as poor quality0
Sequence length15-151
%GC72

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20485.98602870253997No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTTCC12903.7704965948616027No Hit
GGGCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC11403.332066758249788No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGCC8942.6130418262064126No Hit
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC5991.7507964808698449No Hit
GGCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC5451.5929617396895916No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA5231.5286586969865255No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTTCCC3431.0025428930523486No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTTC3340.9762371028556397No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGCC3070.8973197322655131No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGCCC2400.7014877385789028No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGC2240.6547218893403093No Hit
GGAACCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC2230.6517990237628971No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTTCC2220.648876158185485No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGG2090.6108789056791278No Hit
GCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC2060.6021103089468915No Hit
CCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC2000.584573115482419No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGCCCGG1600.4676584923859352No Hit
CCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC1570.45888989565369886No Hit
CTTCGCGCCCTCTCTCTCTCTCTCTCCCCC1450.42381550872475376No Hit
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG1340.39166398737322067No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGGG1330.3887411217958086No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTTCCCGG1280.37412679390874815No Hit
CCCGAGTGTTACAGCCCCCCCGGCAGCAGC1280.37412679390874815No Hit
GGGCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGCA1260.36828106275392397No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGG1250.36535819717651186No Hit
CCCCGAGTGTTACAGCCCCCCCGGCAGCAGC1200.3507438692894514No Hit
CCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC1150.33612954140239093No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGCATTCGTAT1130.3302838102475667No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGG1080.31566948236050624No Hit
GGGCCCCCCGAGTGTTACAGCCCCCCCGGCAGC1000.2922865577412095No Hit
GGGCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAG910.2659807675445007No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGT900.2630579019670885No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGCCCG860.25136643965744015No Hit
GGCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGCA800.2338292461929676No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTTCCCG760.22213778388331923No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGGGGGG740.216292052728495No Hit
TTCCCCACCGGGCCTTCCCGT710.2075234559962587No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGCCC690.20167772484143454No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGC680.19875485926402248No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGG670.19583199368661033No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGGGGG660.19290912810919825No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGGGG640.18706339695437407No Hit
CCACCACCACACCACCACCACCACCACCACCACCACCACCACCACCACCA600.1753719346447257No Hit
ACCCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC590.17244906906731358No Hit
CACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCA580.1695262034899015No Hit
GGGAACCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC570.1666033379124894No Hit
CCGGGCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC570.1666033379124894No Hit
GAACCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC530.154911875602841No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGCATTCGTA520.15198901002542894No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTTC510.14906614444801683No Hit
GCTGCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC500.14614327887060474No Hit
CCATCTTTCGGGTCCGCCCCCGGGGC470.13737468213836845No Hit
GGGCCCCCCGAGTGTTACAGCCCCCCCGGCAG460.13445181656095637No Hit
CCGAGTGTTACAGCCCCCCCGGCAGCAGC460.13445181656095637No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTTCCCT460.13445181656095637No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTTCCCGGGG440.12860608540613216No Hit
GCCGGGCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC420.12276035425130799No Hit
GCTGCCGAGTGTTACAGCCCCCCCGGCAGC420.12276035425130799No Hit
GGCCCCCCGAGTGTTACAGCCCCCCCGGCAGC420.12276035425130799No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGG410.11983748867389589No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGC390.1139917575190717No Hit
GGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG380.11106889194165961No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTT380.11106889194165961No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGATGCGTG380.11106889194165961No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGG380.11106889194165961No Hit
CCGCCCCCCGGCCCCGCGTCC380.11106889194165961No Hit
GGCCCCCCGAGTGTTACAGCCCCCCCGGCAGCAG370.1081460263642475No Hit
CCCGAGTGTTACAGCCCCCCCGGCAGCAG360.10522316078683543No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGCATTCGT360.10522316078683543No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGGGATG360.10522316078683543No Hit
GCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGCCCGG350.10230029520942331No Hit
ACCCCCGAGTGTTACAGCCCCCCCGGCAGCAGC350.10230029520942331No Hit
CCCGCCCCCCGGCCCCGCGTCC350.10230029520942331No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)