Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/d2474f3f21b4479cfa6c3ece208c27/659_SP-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/ea07cb0b5c996dc1b4100441bac112/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/ea07cb0b5c996dc1b4100441bac112/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory