NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_bTo-T1-TRNA-1_B23MHV2LT4_1) - dev_rna_exp09_10-3b7a596a - Workflow Tracker

Runs
dev_rna_exp09_10-3b7a596a
Tasks
GATK4_MARKDUPLICATES (659_bTo-T1-TRNA-1_B23MHV2LT4_1)

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Task Info

Status: succeeded
Hash: 0bebbee3c485
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_bTo-T1-TRNA-1_B23MHV2LT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 16/5b33e8
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/5b33e881065e36c6b0563838ac96c9
Native ID: nf-165b33e881065e36c6b0563838ac96c9-e6f5c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 2
Memory (peak / alloc): 111.9 GB / 148.0 GB
Process I/O (rchar / wchar): 55.7 GB / 37.0 GB
Disk I/O (read / write): 14.7 GB / 37.0 GB
Host: i-08358b8faa35a99a5 ( on-demand)

Runtime

Submitted: Jun 04, 2026 2:43:43 PM
Completed: Jun 04, 2026 3:47:02 PM
Total Duration: 1h 3m

Phases

Queue: 2s
Execution: 1h 0m
Stage/Unstage: 2m 17s

Attempt 1

Execution

Status: failed
Hash: eb/d163c6
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/d163c6edc120b2d8d1042a9d21b6a3
Native ID: nf-ebd163c6edc120b2d8d1042a9d21b6a3-b3945

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0b58a26663258a8f7 ( spot)

Runtime

Submitted: Jun 04, 2026 2:11:44 PM
Completed: Jun 04, 2026 2:43:43 PM
Total Duration: 31m 59s

Phases

Queue: 31m 59s
Execution: -
Stage/Unstage: -