Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/e37abf47782df23203e86d5b5b4959/659_wQ-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/6367df9dd62599c21efbfadf33a571/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/6367df9dd62599c21efbfadf33a571/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory